Cp4.1LG09g08070 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAATTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGGGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAAGAGAAAGTACTTGCAGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGAGAGAGAATCAATTCTCATCTCTCGACCCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGGTTAGTTTCATGTTAATTTGTTTGAATTGATACTCAGTTTTGATACGTGATTGGATGAGTTTTCTGAGAGAATTGAAAGTATTTGGTTGAATGATTATCCAACAGTATAATTTGTTTAATATCATGGATTATCTATCTAGTTTTATGTGATGGAAACTGAAGATTTTCATTATGGGATTGAGCAGCTGATGGTGTGTTCTTATTGTTGTTCTGTGTTATGTTGAAGACAACTATTGAATCATGTCTCCTTTCTTTTTCCTTGTGGTATTAGAATTTTGAAACAGCTGGTGGCTTTTGTCTGTCTTGACAATCTAGAAAAATTTAGAGCTTTCTTTTGATGGTTTATCATGACTAGAAATGTAACAGGCTCCGCTAACAAATATTGTCTGTTTTCGCGTCAGCCTCACGGTTTTAGAACACGTCTGTTAGGGAGAGGTTTCCACACCCTTATAAAGAATGATTCGTTCCCTCTCCACCAAGGTGGGATCTCACAATCCACTCTCCTTGGGGTCCAGTGTCCTTGCTGGCACACCACCCGGTGTCTGGCTCTGATACCATTTGTAATAACCCAAGTCTACCATTCACACACACCGTTCACGGATTTAAAACGTGTCTGTTAGGGAGAGGTTTTCACACCCTTGTAAAGAATGTTTCGTTCCCCTCTCCGCCCTCCTTGGTGGTCGAGCGTTCTCGCTAGCACACCGTCCGGTATTCGACTCTGATACCATTTGTAATACCCAAGCCTATTGCTAATAGATATTGTCCGTTTTGGCCCGTTATGTATCGCCGTTAGTCTCATGGTTTTAAAATGCGTCTGGTAGGAAGAAGTTTCCACACACGTATATAAAGAATGTTTCATTCCCCTCTCCAACTAACGTGGGATCTCACAATTCACCCTCCTTGGGGGCCAGCATCCTCGCTAGCACACCACCCGATGTCACTCTAATACCGTTTGTAACAGCCCAAGCCCATTGCTAACAAATATTGTCCACTTTGGCCCGTTACATATTTCCATCAGCCTCACGATTTTAAAACGTGTTAGAGAAAGGTTTCCACACCCTTACGAAGAATACTTTGTTCCCCTCTCCAAACACCCTTATAAAGAACACTTCGTTCCCCTCTCCAACCAACGTGGGATCTCACAAGAAACATAATTTACTCTTAAAAGATTTTGAAATCTATAAGTTGTTTGTTAATTCTCGATCTCGTGCAGAAACATGCGTCATAACGTTCCGAAATCCACTGGTTTGGATTCATGGATAATGAGCTTGGTTCTAAGTTGATATATCACTAATCGTTCACTTTTCTTGGTAGTCTAGTGGCGATTGTTTGACGTTCCTGAAGAACTTTTATTGATCTTTTCCTGTAATAACATTGTGATGAATTACTGTAACCAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGAAGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGCGAATACCGACCCGAGCTTCTATCTGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTTTTCTTTTTCACCAGTTCCATTGCAGAGAACGGTGAGCATTCCAAGGCTTCCCAACGTCTCGTATCATCGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCTAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAAATTCTGTTTGTGTCAACAGGTAATACCACTCATTTTCATCTCAAACTTGCAGTTGTGTGATATATTCAGCTGTGATAAGCATGTCTACTCTGTATGTTTGGCTCAATCAGCTTAAGAAGTTGGAATGCTTTTCGACTATGATTGGGCATATATTGTATTCTGTTTTTTTTTTAGTTATTGTATAATCAATTACTTTGTGGAACGAGTGTTAGCGAGAACGTTGGGCTCCGAAGGGGGTGAATTGTGAGATCTCTGTGGGAGAGGATAATGAAACATTCTTTATTAGGGTGTGAAAACCTCCTCCT ATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAATTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGGGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAAGAGAAAGTACTTGCAGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGAGAGAGAATCAATTCTCATCTCTCGACCCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGAAGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGCGAATACCGACCCGAGCTTCTATCTGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTTTTCTTTTTCACCAGTTCCATTGCAGAGAACGGTGAGCATTCCAAGGCTTCCCAACGTCTCGTATCATCGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCTAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAAATTCTGTTTGTGTCAACAGGTAATACCACTCATTTTCATCTCAAACTTGCAGTTGTGTGATATATTCAGCTGTGATAAGCATGTCTACTCTGTATGTTTGGCTCAATCAGCTTAAGAAGTTGGAATGCTTTTCGACTATGATTGGGCATATATTGTATTCTGTTTTTTTTTTAGTTATTGTATAATCAATTACTTTGTGGAACGAGTGTTAGCGAGAACGTTGGGCTCCGAAGGGGGTGAATTGTGAGATCTCTGTGGGAGAGGATAATGAAACATTCTTTATTAGGGTGTGAAAACCTCCTCCT ATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAATTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGGGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAAGAGAAAGTACTTGCAGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGAGAGAGAATCAATTCTCATCTCTCGACCCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGAAGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGCGAATACCGACCCGAGCTTCTATCTGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTTTTCTTTTTCACCAGTTCCATTGCAGAGAACGGTGAGCATTCCAAGGCTTCCCAACGTCTCGTATCATCGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCTAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAA MAYSYDATASIDSFLHSLENFNCGFVRGGSILSQSLVLNGEKGGVAKAPILPAKKRGSEEKVLAALKNHSEAERRRRERINSHLSTLRGLVPCPAKRDKATLLAEVVSQVKELKKKAAEAINGVFVPMDTDEVKVEPCGIEANAAYMTFKATLCCEYRPELLSDLKQALDALHLKLAKAEISTLGNRVKNVFFFTSSIAENGEHSKASQRLVSSVHQAISFVLEKASSQEYSPRTTLPTKRQRLCSSYTSSSSSGS
BLAST of Cp4.1LG09g08070 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29 Identity = 83/192 (43.23%), Postives = 118/192 (61.46%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.7e-28 Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26 Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26 Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 6.0e-23 Identity = 79/199 (39.70%), Postives = 118/199 (59.30%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TrEMBL
Match: A0A0A0LX88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G477540 PE=4 SV=1) HSP 1 Score: 394.8 bits (1013), Expect = 7.9e-107 Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TrEMBL
Match: A0A0U2RXW6_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 2.3e-66 Identity = 153/260 (58.85%), Postives = 182/260 (70.00%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TrEMBL
Match: M5X4S7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021837mg PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.0e-66 Identity = 154/262 (58.78%), Postives = 185/262 (70.61%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TrEMBL
Match: A0A067KLJ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10603 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 8.3e-64 Identity = 148/248 (59.68%), Postives = 186/248 (75.00%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TrEMBL
Match: A0A061GLQ3_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative isoform 2 OS=Theobroma cacao GN=TCM_029711 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 5.0e-61 Identity = 138/235 (58.72%), Postives = 174/235 (74.04%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 131.3 bits (329), Expect = 8.3e-31 Identity = 83/192 (43.23%), Postives = 118/192 (61.46%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 126.3 bits (316), Expect = 2.7e-29 Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 8.5e-28 Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32) HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27 Identity = 70/184 (38.04%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 109.4 bits (272), Expect = 3.4e-24 Identity = 79/199 (39.70%), Postives = 118/199 (59.30%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. NCBI nr
Match: gi|659068169|ref|XP_008443115.1| (PREDICTED: putative transcription factor bHLH107 [Cucumis melo]) HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107 Identity = 215/256 (83.98%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. NCBI nr
Match: gi|449462649|ref|XP_004149053.1| (PREDICTED: putative transcription factor bHLH107 [Cucumis sativus]) HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-106 Identity = 214/256 (83.59%), Postives = 227/256 (88.67%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. NCBI nr
Match: gi|645237580|ref|XP_008225271.1| (PREDICTED: transcription factor bHLH30-like [Prunus mume]) HSP 1 Score: 262.7 bits (670), Expect = 6.7e-67 Identity = 155/262 (59.16%), Postives = 186/262 (70.99%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. NCBI nr
Match: gi|950804816|gb|ALN42136.1| (bHLH transcription factor [Prunus pseudocerasus]) HSP 1 Score: 260.4 bits (664), Expect = 3.3e-66 Identity = 153/260 (58.85%), Postives = 182/260 (70.00%), Query Frame = 1
BLAST of Cp4.1LG09g08070 vs. NCBI nr
Match: gi|595884005|ref|XP_007212891.1| (hypothetical protein PRUPE_ppa021837mg [Prunus persica]) HSP 1 Score: 260.0 bits (663), Expect = 4.4e-66 Identity = 154/262 (58.78%), Postives = 185/262 (70.61%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |