CmoCh18G003870 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACTGGAATCGCCTCTCTGCAATTCTCTCATTTTCAGCGGCACTCTGCTCGATCCTATACCTCCAAATCACTCGTTGTTCAATTTCATCCGTGAATTGATCGGAAAATCCACCTGAGTTCATTGTATTCTCGAATTCTTTCCGATTTCCAAGCATCAAATTCTTAGAAATACAGTCTTGATTTCACTTCCAGACTTGGAAATGCTCAAATTCAAGACGATCAAGAAGAAGATGTGGATTTTCTCTCTTTGATTCTCCCCGAATAACCATCTATTTGCAGAAATCGTTATGGAAGGTAGGAAAAAACGATCAATCAAAGTCACGATCATCGCGAGAAGAGTTACCAGCAAGATTTTCAGCAACGGAGTCTGTGTACAACAAAGCTTCCCTCTCCATAAACTCTCCTTTTGGTTTGCTCCAACGAATCGTCCTCCTGGACTGTTGTCTTCGACTTTCGGTTCGTAAGTGATTTCCTAGTAACGATTTCTCTTTAGGGGTTTTTGGATTTTGCAATCTATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAGTTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGCGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAGGAGAAAGTACTTGCGGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGGGAGAGAATCAATTCACATCTCTCGACTCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGGTTAGTTTCATGTTAATTTGTTTGAATTGATACTCAGTTTGATAAGTGATTGGATGAGTATTTGGTTGAATGATTATCCAACGGTACAATTTGTTTAATATCATCATTTCAAGAGTCTAATTGGATTGTCTAGCTAGTTTTATGTGATGGAAACTGAACCTTTTTAATATGGGATCGAGCAGCTGATGGTGTGTTCTTATTGTTGTTCTGTGTTATGTTGAAGACAACTATTGAATCATGTCTTCTTTCTGTTTCTCCTGGTGGTATTAGAATTTTGAAAGAGCTGGTGGCTTTTGTCTGTCTTGACAGTCTAGAAAAATTTAGAGCTTTCTTTAGATGGTTTATCATGACTAGAAGTGTAACAGGCTCCGCTAACAGATATTGTCTTCTTTCGCCGTCAGCCTTACGATTTTAGAACACCTCTATTAGGCAGAGGTTTCCACACCCTTGTAAAGAATGTTTCGTTCCCCTCTCCACCAGGGTGGGATCTCACAATCCACCCTCCTTAGGGGTCTAGTGTCCTTGCTGGCACAACACCCGGTGTCTGGCTCTGATACCATTTGTAACAACCCAAGCCTACCGTTCATAGACACCGTTCACATATATTGTTTGTTTTGGCCCGTTACGTATCACTGTCAGCCTCACAGTTTTAAAACGTGTTTGTTAGAAAGAGGTTTCCACACCCTTGTAAAGAATGTTTCGTTCCCCTCTCCGCCCTCCTTGGTGGCCAAGCGTTCTCGCTAGCACATAGCCCAGTATTCGGCTCTGATACCATTTGTAATAGCCCAAGCCCACTGCTAACAGATAGTGTCTGTTTTGGCCTGTTACGTATCGCTGTCAGCCTCACAGTTTTAAAATGTCTCTGTTAGGAAGAGGTTTCCCCACACTTATATAAAGAATATTTCGTTTTCCTCTCCAATTAACGTGGGATCTCACAATCCACCCTCCTTGGGGGTCAGCATCTTTGCTAGCACACCACCCGATGTCTGACTCTGATACCATTTGTAACCGCCCAAGCCCACTGCTAACAAATATTGTCCACTTTGGCCCGTTATATATCGCCGTCAGCCTTACAATTTTAAAATGCTTCTGTTATGGAAATATTTCCACACCCTTATAAAGAATACTTTGTTCCCCCCTCCAAACACCCTTGTAAAGAATATCTCGTTCCCCTCTTCAACCAATGTAGGATCTCACAAGAAACATAATTTACTCCTTAAAGATTTTGAAATCTATAAGCTGTTTGTTAATTCTCGATCTCGTGCAGAAAAATGCGTCATAACATTCCGAAATCCACCGGTTTGGATTCATGGATAATGAGCTTGGTTCTAAGTTGATATATCACTAATCGTTCACTTTTCTTGGTAGTCTAGTGGCGATTGTTTGACGTTCCTGAAGAACTTTTATTGATCTTTTCCTGTAATAACATTGTGATGAATTACTGTAACCAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGATGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGTGAATACCGACCCGAGCTTCTATCCGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTATTCTTTTTCACCAGTTCCATTGCAGAGAATGGTGAGCATTCCGAGGCTTCCCAACGTCTCGTGTCATTGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCCAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAAATTCTGTATGTGTCAACAGGTAATACCACTCATTTTCATCTCAAACTTGCAGTTGTGTGATATATTCAGCTGTGATAAGCATGTCTACTCTGTATGTTTGGCTCAATCAGCTTAAGAAGTTGGAATGCTTTTCTGACTATGATTGGGCATATATTGTATTCTGTTTTTTTAGTTTTTTTTTAGTTATTGTATAATCAATTACTATGTAAGATCCCTCGTCGATTGGAGAAGACCTCGGCTCCAAACGGAGTGAATTGTGAGATCCCGGTTGGAGAGGGGGAATGTTTGAAAACCTCTCCCTAAGTTTTAAAAACCTTGAGGGAATCCCGAGAGGGAAAATCTAAAAAGGACAATATCTACCAAGCTTGAACTGTTACATACTCGTGTTTTCTTTTGCATAGCCACAGAGGGTCTACG AACTGGAATCGCCTCTCTGCAATTCTCTCATTTTCAGCGGCACTCTGCTCGATCCTATACCTCCAAATCACTCGTTGTTCAATTTCATCCGTGAATTGATCGGAAAATCCACCTGAGTTCATTGTATTCTCGAATTCTTTCCGATTTCCAAGCATCAAATTCTTAGAAATACAGTCTTGATTTCACTTCCAGACTTGGAAATGCTCAAATTCAAGACGATCAAGAAGAAGATGTGGATTTTCTCTCTTTGATTCTCCCCGAATAACCATCTATTTGCAGAAATCGTTATGGAAGGTAGGAAAAAACGATCAATCAAAGTCACGATCATCGCGAGAAGAGTTACCAGCAAGATTTTCAGCAACGGAGTCTGTGTACAACAAAGCTTCCCTCTCCATAAACTCTCCTTTTGGTTTGCTCCAACGAATCGTCCTCCTGGACTGTTGTCTTCGACTTTCGGTTCGTAAGTGATTTCCTAGTAACGATTTCTCTTTAGGGGTTTTTGGATTTTGCAATCTATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAGTTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGCGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAGGAGAAAGTACTTGCGGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGGGAGAGAATCAATTCACATCTCTCGACTCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGATGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGTGAATACCGACCCGAGCTTCTATCCGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTATTCTTTTTCACCAGTTCCATTGCAGAGAATGGTGAGCATTCCGAGGCTTCCCAACGTCTCGTGTCATTGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCCAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAAATTCTGTATGTGTCAACAGGTAATACCACTCATTTTCATCTCAAACTTGCAGTTGTGTGATATATTCAGCTGTGATAAGCATGTCTACTCTGTATGTTTGGCTCAATCAGCTTAAGAAGTTGGAATGCTTTTCTGACTATGATTGGGCATATATTGTATTCTGTTTTTTTAGTTTTTTTTTAGTTATTGTATAATCAATTACTATGTAAGATCCCTCGTCGATTGGAGAAGACCTCGGCTCCAAACGGAGTGAATTGTGAGATCCCGGTTGGAGAGGGGGAATGTTTGAAAACCTCTCCCTAAGTTTTAAAAACCTTGAGGGAATCCCGAGAGGGAAAATCTAAAAAGGACAATATCTACCAAGCTTGAACTGTTACATACTCGTGTTTTCTTTTGCATAGCCACAGAGGGTCTACG ATGGCGTATTCATACGATGCGACTGCTTCAATCGACTCGTTTTTACATAGTTTAGAGAGTTTTAATTGTGGATTTGTACGTGGTGGATCAATATTATCTCAGTCTTTAGTGTTGAATGGTGAGAAGCGAGGGGTTGCAAAAGCCCCAATTCTGCCGGCGAAGAAAAGGGGGTCGGAGGAGAAAGTACTTGCGGCGTTGAAGAATCATAGCGAGGCGGAGAGGCGGAGGAGGGAGAGAATCAATTCACATCTCTCGACTCTGCGTGGCCTTGTTCCTTGCCCTGCAAAGAGGGACAAAGCCACACTGCTAGCTGAAGTTGTTAGCCAAGTGAAAGAATTGAAGAAGAAGGCTGCAGAAGCCATCAATGGTGTTTTTGTTCCAATGGATACCGACGAAGTCAAAGTCGAACCTTGTGGAATCGATGCAAATGCCGCATACATGACCTTCAAGGCAACCCTTTGTTGTGAATACCGACCCGAGCTTCTATCCGATCTTAAACAAGCTCTTGATGCCCTTCACCTGAAGTTGGCAAAGGCAGAAATATCAACTTTGGGAAACCGGGTGAAGAACGTATTCTTTTTCACCAGTTCCATTGCAGAGAATGGTGAGCATTCCGAGGCTTCCCAACGTCTCGTGTCATTGGTTCATCAGGCAATAAGCTTTGTACTCGAGAAAGCTTCATCCCAAGAATATTCGCCCAGAACGACACTCCCAACGAAAAGGCAAAGGCTGTGTAGCTCCTATACATCAAGCTCCTCCTCTGGATCATAA
BLAST of CmoCh18G003870 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.9e-29 Identity = 84/192 (43.75%), Postives = 119/192 (61.98%), Query Frame = 1
BLAST of CmoCh18G003870 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28 Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1
BLAST of CmoCh18G003870 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.9e-27 Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of CmoCh18G003870 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 7.5e-26 Identity = 69/184 (37.50%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of CmoCh18G003870 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.0e-22 Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TrEMBL
Match: A0A0A0LX88_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G477540 PE=4 SV=1) HSP 1 Score: 390.2 bits (1001), Expect = 1.9e-105 Identity = 212/256 (82.81%), Postives = 225/256 (87.89%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TrEMBL
Match: A0A0U2RXW6_9ROSA (BHLH transcription factor OS=Prunus pseudocerasus PE=2 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 2.0e-65 Identity = 151/260 (58.08%), Postives = 181/260 (69.62%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TrEMBL
Match: M5X4S7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021837mg PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 2.6e-65 Identity = 152/262 (58.02%), Postives = 184/262 (70.23%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TrEMBL
Match: A0A067KLJ6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10603 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 4.1e-63 Identity = 147/248 (59.27%), Postives = 184/248 (74.19%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TrEMBL
Match: A0A059C6W6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E02743 PE=4 SV=1) HSP 1 Score: 240.4 bits (612), Expect = 2.5e-60 Identity = 142/245 (57.96%), Postives = 177/245 (72.24%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TAIR10
Match: AT1G68810.1 (AT1G68810.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30 Identity = 84/192 (43.75%), Postives = 119/192 (61.98%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TAIR10
Match: AT2G41130.1 (AT2G41130.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 127.5 bits (319), Expect = 1.2e-29 Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TAIR10
Match: AT3G56770.1 (AT3G56770.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 122.1 bits (305), Expect = 5.0e-28 Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TAIR10
Match: AT3G25710.1 (AT3G25710.1 basic helix-loop-helix 32) HSP 1 Score: 119.0 bits (297), Expect = 4.2e-27 Identity = 69/184 (37.50%), Postives = 107/184 (58.15%), Query Frame = 1
BLAST of CmoCh18G003870 vs. TAIR10
Match: AT2G40200.1 (AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 108.6 bits (270), Expect = 5.7e-24 Identity = 78/200 (39.00%), Postives = 115/200 (57.50%), Query Frame = 1
BLAST of CmoCh18G003870 vs. NCBI nr
Match: gi|659068169|ref|XP_008443115.1| (PREDICTED: putative transcription factor bHLH107 [Cucumis melo]) HSP 1 Score: 393.3 bits (1009), Expect = 3.3e-106 Identity = 213/256 (83.20%), Postives = 227/256 (88.67%), Query Frame = 1
BLAST of CmoCh18G003870 vs. NCBI nr
Match: gi|449462649|ref|XP_004149053.1| (PREDICTED: putative transcription factor bHLH107 [Cucumis sativus]) HSP 1 Score: 390.2 bits (1001), Expect = 2.8e-105 Identity = 212/256 (82.81%), Postives = 225/256 (87.89%), Query Frame = 1
BLAST of CmoCh18G003870 vs. NCBI nr
Match: gi|645237580|ref|XP_008225271.1| (PREDICTED: transcription factor bHLH30-like [Prunus mume]) HSP 1 Score: 259.6 bits (662), Expect = 5.7e-66 Identity = 153/262 (58.40%), Postives = 185/262 (70.61%), Query Frame = 1
BLAST of CmoCh18G003870 vs. NCBI nr
Match: gi|950804816|gb|ALN42136.1| (bHLH transcription factor [Prunus pseudocerasus]) HSP 1 Score: 257.3 bits (656), Expect = 2.8e-65 Identity = 151/260 (58.08%), Postives = 181/260 (69.62%), Query Frame = 1
BLAST of CmoCh18G003870 vs. NCBI nr
Match: gi|595884005|ref|XP_007212891.1| (hypothetical protein PRUPE_ppa021837mg [Prunus persica]) HSP 1 Score: 256.9 bits (655), Expect = 3.7e-65 Identity = 152/262 (58.02%), Postives = 184/262 (70.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |