Cla013532 (gene) Watermelon (97103) v1

NameCla013532
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionBHLH transcription factor (AHRD V1 *--- Q84WX1_BRANA); contains Interpro domain(s) IPR001092 Basic helix-loop-helix dimerisation region bHLH
LocationChr2 : 28325966 .. 28327325 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACATTTCTCGCAGATTTACTCTTACGATGGGTTTTGCGCTAACTCTGCGGCAATGAGAAATGGGTCTGCCTCAACTTCTTCCTTAGTGCTCGATAGTGAGAGAGACGAGCTTGTAGAGGCTCCATTGAAGCTGGAGATTAAAGGGGTTCCGGCTGAAAGGAGCGCTGCGGCGCTGAAGAATCACAGCGAGGCTGAGAGAAGGCGTAGAGCCAGAATCAACGGCCATCTTGGGAGTCTTAGAAGTCTTGTTCCTGGTGGGAAGAAGGTGGGTTTTTTTTTTTTTTTTTTTCCTGCCATTTTTAAGTTATTATGGTTTTTGATTGAGCTCTGTTCCAATTTGGGGTTTTAGTTTTGTCTTTAATATTATGTCAGAGAGATTCGTCCAAGACACTGTTTATGGCAAGGACTTATTAAAATCTCCTGATTAAGATGCTTGTTGGGTCATTTATGTCTGCTTTGCTCTAAATGTTAAGAGAATGAGAATTTCGAAATGTTGAAATTCAATTCATTCTAGTTTAAGAAAACTTCTGTTTTGACTTTTGTTCGTTCATTCATTCATTCATAGCATCTACTTGTTTTGGTATTGGCTGAGATGATGTCACCCATTTGACTCTAATTATATGAATGAATATTCCTGTTGATGAGTGGTGAAGACATCATCTAACTAAAGGCATCTGTTGAATTACTTCTCAATTTGCCTTATTTATTGCACCAACCAGATTTATTTATGGAGATGAGACAATTTCTAGTATCTCTTCCATTCTGTTCATTATCTTGGTTCCATTGAACAGTTATGTAATATAAGCTTGTTTTATGCTTCCCATGAGTATCATCCTGACTTTCTTTGTTTCTTCAATCACCAGATGGACAAAGCAACACTACTTGCTGAAGTAATTAGCCATTTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATCATACCGAAAGAAATCGACGAAATAACAGTTGAACAACAGGAGGATGGATTCAATGGATTGCCGTATTCAATTAGAGCATCGCTATGTTGTGAGTATAAACCTGGCCTCCTACCTGATTTAAGAAGGGCACTTCATGCTCTGGACCTGATAATAAAGAGGGCAGAGATTGCTACCTTAAATGGCAGGATGAAGAATGTGTTTGTGTTGACCAGCTGCAAAGAAGGAAACATTGAAACTACTGAATTGCGGCGGTTCCTCGAGACCTCCGTGCACCAAGCCATCAAATCTGTGCTTAACAAGTTCTCCGATCCGCAAGAGTTTTCGTTTATGACATTTCCAAACAAGAGACGGCGAATTTCCCTGTTCAATTCGTCAAGTTCATCCCCTATGGGTGATTTCTGGTGA

mRNA sequence

ATGACACATTTCTCGCAGATTTACTCTTACGATGGGTTTTGCGCTAACTCTGCGGCAATGAGAAATGGGTCTGCCTCAACTTCTTCCTTAGTGCTCGATAGTGAGAGAGACGAGCTTGTAGAGGCTCCATTGAAGCTGGAGATTAAAGGGGTTCCGGCTGAAAGGAGCGCTGCGGCGCTGAAGAATCACAGCGAGGCTGAGAGAAGGCGTAGAGCCAGAATCAACGGCCATCTTGGGAGTCTTAGAAGTCTTGTTCCTGGTGGGAAGAAGATGGACAAAGCAACACTACTTGCTGAAGTAATTAGCCATTTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATCATACCGAAAGAAATCGACGAAATAACAGTTGAACAACAGGAGGATGGATTCAATGGATTGCCGTATTCAATTAGAGCATCGCTATGTTGTGAGTATAAACCTGGCCTCCTACCTGATTTAAGAAGGGCACTTCATGCTCTGGACCTGATAATAAAGAGGGCAGAGATTGCTACCTTAAATGGCAGGATGAAGAATGTGTTTGTGTTGACCAGCTGCAAAGAAGGAAACATTGAAACTACTGAATTGCGGCGGTTCCTCGAGACCTCCGTGCACCAAGCCATCAAATCTGTGCTTAACAAGTTCTCCGATCCGCAAGAGTTTTCGTTTATGACATTTCCAAACAAGAGACGGCGAATTTCCCTGTTCAATTCGTCAAGTTCATCCCCTATGGGTGATTTCTGGTGA

Coding sequence (CDS)

ATGACACATTTCTCGCAGATTTACTCTTACGATGGGTTTTGCGCTAACTCTGCGGCAATGAGAAATGGGTCTGCCTCAACTTCTTCCTTAGTGCTCGATAGTGAGAGAGACGAGCTTGTAGAGGCTCCATTGAAGCTGGAGATTAAAGGGGTTCCGGCTGAAAGGAGCGCTGCGGCGCTGAAGAATCACAGCGAGGCTGAGAGAAGGCGTAGAGCCAGAATCAACGGCCATCTTGGGAGTCTTAGAAGTCTTGTTCCTGGTGGGAAGAAGATGGACAAAGCAACACTACTTGCTGAAGTAATTAGCCATTTGAAAGTGCTGAAAAGAGCTGCTGCAGAAGTTAGTGATGCCCATATCATACCGAAAGAAATCGACGAAATAACAGTTGAACAACAGGAGGATGGATTCAATGGATTGCCGTATTCAATTAGAGCATCGCTATGTTGTGAGTATAAACCTGGCCTCCTACCTGATTTAAGAAGGGCACTTCATGCTCTGGACCTGATAATAAAGAGGGCAGAGATTGCTACCTTAAATGGCAGGATGAAGAATGTGTTTGTGTTGACCAGCTGCAAAGAAGGAAACATTGAAACTACTGAATTGCGGCGGTTCCTCGAGACCTCCGTGCACCAAGCCATCAAATCTGTGCTTAACAAGTTCTCCGATCCGCAAGAGTTTTCGTTTATGACATTTCCAAACAAGAGACGGCGAATTTCCCTGTTCAATTCGTCAAGTTCATCCCCTATGGGTGATTTCTGGTGA

Protein sequence

MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISLFNSSSSSPMGDFW
BLAST of Cla013532 vs. Swiss-Prot
Match: BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.1e-32
Identity = 84/202 (41.58%), Postives = 124/202 (61.39%), Query Frame = 1

Query: 45  KLEIKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           K+  + +   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITV---EQQEDGFNGLPYSIRASLCCEYKPGLLPDLRR 164
           K LKR  + +S+ +++P E DE+TV   E++E G     + I+ASLCCE +  LLPD+ +
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETGDG--RFVIKASLCCEDRSDLLPDMIK 279

Query: 165 ALHALDLIIKRAEIATLNGRMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFS 224
            L A+ L   +AEI T+ GR+KNV  +T  +    E  E   +   ++ +A+K+V+ K +
Sbjct: 280 TLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE--EYCIGTIEEALKAVMEKSN 339

Query: 225 DPQEFSFMTFPNKRRRISLFNS 244
              E S  +   KR+R+S  N+
Sbjct: 340 --VEESSSSGNAKRQRMSSHNT 355

BLAST of Cla013532 vs. Swiss-Prot
Match: BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.1e-28
Identity = 75/192 (39.06%), Postives = 110/192 (57.29%), Query Frame = 1

Query: 45  KLEIKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           KL  + V   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 118 KLSAQEVMDAKALAASKSHSEAERRRRERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177

Query: 105 KVLKRAAAEVSDAHIIPKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALH 164
           K LKR  ++++D + +P E D++TV+   +   G    IRAS CC+ +  L+ D+  AL 
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEG-NLVIRASFCCQDRTDLMHDVINALK 237

Query: 165 ALDLIIKRAEIATLNGRMKNVFVLTSCKEGNIETTELRRFLE-----------------T 220
           +L L   +AEIAT+ GR+KN+  L+   +   +    RR  +                 +
Sbjct: 238 SLRLRTLKAEIATVGGRVKNILFLSREYDDEEDHDSYRRNFDGDDVEDYDEERMMNNRVS 297

BLAST of Cla013532 vs. Swiss-Prot
Match: BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-26
Identity = 73/170 (42.94%), Postives = 102/170 (60.00%), Query Frame = 1

Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           +R+ AAL+NH EAERRRR RIN HL  LR+++    K DKATLLA+V+  ++ LK+   E
Sbjct: 62  DRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLE 121

Query: 114 VSDAH--IIPKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIK 173
            SD+   ++P E DEI+V    D  N      +ASLCCE +  LLPDL   L +L++   
Sbjct: 122 TSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTL 181

Query: 174 RAEIATLNGRMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFS 222
           RAE+ T+ GR ++V V+ + KE  +   E   FL+     A+KS+L + S
Sbjct: 182 RAEMVTIGGRTRSVLVVAADKE--MHGVESVHFLQ----NALKSLLERSS 225

BLAST of Cla013532 vs. Swiss-Prot
Match: BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.8e-24
Identity = 69/168 (41.07%), Postives = 99/168 (58.93%), Query Frame = 1

Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           +++ A+L+NH EAER+RRARIN HL  LR L+    K DK+TLLA+V+  +K LK+   E
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 114 VSDAHIIPKEIDEITVEQQEDGFNGLPYSI--RASLCCEYKPGLLPDLRRALHALDLIIK 173
           ++D   IP E DEI+V   ED   G    I  + S CCE +P LL DL   L +L +   
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 174 RAEIATLNGRMKNVFVLTSCKE--GNIETTELRRFLETSVHQAIKSVL 218
            A++ T+ GR +NV V+ + KE  G      L+  L++ + ++ KSV+
Sbjct: 160 FADMTTVGGRTRNVLVVAADKEHHGVQSVNFLQNALKSLLERSSKSVM 206

BLAST of Cla013532 vs. Swiss-Prot
Match: BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.5e-21
Identity = 70/191 (36.65%), Postives = 102/191 (53.40%), Query Frame = 1

Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAE 113
           E++ +  ++H  AE+RRR RIN HL +LR LVP   K+DKA LLA VI  +K LK+ AAE
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 114 VSDAHIIPKEIDEITVEQQ-----EDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDL 173
                 +P E DE+TV+ +     E   N + +  +AS CCE +P  + ++ R L  L L
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIF--KASFCCEDQPEAISEIIRVLTKLQL 177

Query: 174 IIKRAEIATLNGRMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKF--SDPQEF 233
              +AEI ++ GRM+  F+L   K+ N   T        ++ Q++ S LN+   S     
Sbjct: 178 ETIQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTS 237

Query: 234 SFMTFPNKRRR 238
           S     +KR+R
Sbjct: 238 SVCRIRSKRQR 243

BLAST of Cla013532 vs. TrEMBL
Match: A0A0A0KFN8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G227540 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 6.2e-128
Identity = 239/253 (94.47%), Postives = 244/253 (96.44%), Query Frame = 1

Query: 1   MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAAL 60
           M HFSQIYSYDGFCANSA+MRNGS STSSLVLDSERDELVEAPLKLE KGVPAERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCANSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARIN HLG LRSLVPGGKKMDKATLLAEVISHL VLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINDHLGILRSLVPGGKKMDKATLLAEVISHLNVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNG 180
           P+E DEITVE QEDGFNG+PYSIRASLCC+YKPGLLPDLRRALHALDLII+RAEIATLNG
Sbjct: 121 PEESDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240
           RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 FNSSSSSPMGDFW 254
           FNSSSSS MGDFW
Sbjct: 241 FNSSSSSSMGDFW 252

BLAST of Cla013532 vs. TrEMBL
Match: F6H4Y9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02350 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 6.9e-79
Identity = 157/247 (63.56%), Postives = 189/247 (76.52%), Query Frame = 1

Query: 11  DGFCANS---AAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAE 70
           DGF  NS   A +R GS+S+S LVLDSER ELV AP +L    V AE++  ALKNHSEAE
Sbjct: 13  DGFSENSGYGAIIRGGSSSSSLLVLDSERGELVRAPARLGPNEVKAEKAMVALKNHSEAE 72

Query: 71  RRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEI 130
           RRRR RIN HL +LR ++PG KKMDKA+LL EV+SHLK LKR+AAE+S   ++P +IDE+
Sbjct: 73  RRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKGFLVPMDIDEV 132

Query: 131 TVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFV 190
            VEQQE G +  PYSI+ASLCC+YKPG+L DLRRAL  + L   RAEIATL GRMKNVFV
Sbjct: 133 RVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFV 192

Query: 191 LTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSF-MTFPNKRRRISLFNSSSS 250
           +T CK+GN+E TE R+    SVHQA++SVL+KF   Q+FS   T  NKR+RIS+FNSSSS
Sbjct: 193 MTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRISIFNSSSS 252

Query: 251 SPMGDFW 254
           SP GDFW
Sbjct: 253 SPFGDFW 259

BLAST of Cla013532 vs. TrEMBL
Match: K7LW62_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G209900 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 157/242 (64.88%), Postives = 187/242 (77.27%), Query Frame = 1

Query: 11  DGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAERRR 70
           DGF  +   + NG  S+SSLVLD E+ ELVEAP+KLE KGV  ERS  ALKNHSEAERRR
Sbjct: 13  DGFQVSCGVIGNGYGSSSSLVLDKEKGELVEAPVKLERKGVSPERSIEALKNHSEAERRR 72

Query: 71  RARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEITVE 130
           RARIN HL +LRS++PG KK+DKATLL EVI HLK LK  AA+ S+  +IPK+ DEI +E
Sbjct: 73  RARINAHLDTLRSVIPGAKKLDKATLLGEVIRHLKDLKTNAAQASEGLMIPKDSDEIRIE 132

Query: 131 QQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFVLTS 190
           +QE G NG PYSIRASLCCEYKPGLL D+R+AL AL L+I RAEIATL GRMKNVFV+ +
Sbjct: 133 EQEGGLNGFPYSIRASLCCEYKPGLLTDIRQALDALHLMIIRAEIATLGGRMKNVFVIIN 192

Query: 191 CKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISLFNSSSSSPMG 250
           CKE N+E  E R+FL  SVHQA++SVL++FS  Q+   M    KRRRIS+F+SSS   +G
Sbjct: 193 CKEQNVEDAEYRQFLAGSVHQALRSVLDRFSVSQD---MLESRKRRRISIFSSSS---IG 248

Query: 251 DF 253
           DF
Sbjct: 253 DF 248

BLAST of Cla013532 vs. TrEMBL
Match: A0A0B2R6Y4_GLYSO (Transcription factor bHLH30 OS=Glycine soja GN=glysoja_007666 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.4e-76
Identity = 157/242 (64.88%), Postives = 187/242 (77.27%), Query Frame = 1

Query: 11  DGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAERRR 70
           DGF  +   + NG  S+SSLVLD E+ ELVEAP+KLE KGV  ERS  ALKNHSEAERRR
Sbjct: 13  DGFQVSCGVIGNGYGSSSSLVLDKEKGELVEAPVKLERKGVSPERSIEALKNHSEAERRR 72

Query: 71  RARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEITVE 130
           RARIN HL +LRS++PG KK+DKATLL EVI HLK LK  AA+ S+  +IPK+ DEI +E
Sbjct: 73  RARINAHLDTLRSVIPGAKKLDKATLLGEVIRHLKDLKTNAAQASEGLMIPKDSDEIRIE 132

Query: 131 QQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFVLTS 190
           +QE G NG PYSIRASLCCEYKPGLL D+R+AL AL L+I RAEIATL GRMKNVFV+ +
Sbjct: 133 EQEGGLNGFPYSIRASLCCEYKPGLLTDIRQALDALHLMIIRAEIATLGGRMKNVFVIIN 192

Query: 191 CKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISLFNSSSSSPMG 250
           CKE N+E  E R+FL  SVHQA++SVL++FS  Q+   M    KRRRIS+F+SSS   +G
Sbjct: 193 CKEQNVEDAEYRQFLAGSVHQALRSVLDRFSVSQD---MLESRKRRRISIFSSSS---IG 248

Query: 251 DF 253
           DF
Sbjct: 253 DF 248

BLAST of Cla013532 vs. TrEMBL
Match: B9IQN9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11870g PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 154/247 (62.35%), Postives = 187/247 (75.71%), Query Frame = 1

Query: 11  DGFCANS---AAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAE 70
           DGF  N+   A  R G +STSSLVLD+ER ELVEA +++E KGV AERS AALKNHSEAE
Sbjct: 21  DGFLVNTGLQAKTRTGPSSTSSLVLDNERGELVEATVRMERKGVAAERSIAALKNHSEAE 80

Query: 71  RRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEI 130
           ++RRARIN HL +LRSLVPG +KMDKA+LLAEVI+HLK LKR A E S+  ++P +IDE+
Sbjct: 81  KKRRARINAHLDTLRSLVPGTRKMDKASLLAEVIAHLKELKRQATEASEGLLMPLDIDEV 140

Query: 131 TVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFV 190
            VEQQEDG    PY IRAS+CC+ KPG+L DLR+AL AL LII +AEIATL GRMKNVFV
Sbjct: 141 RVEQQEDGLLSAPYVIRASICCDCKPGILSDLRQALDALHLIIMKAEIATLEGRMKNVFV 200

Query: 191 LTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSF-MTFPNKRRRISLFNSSSS 250
           ++SCKEG+    ++ +FL  S+HQA +S+L+KFS  QEF    T  NKRRR+  F  S S
Sbjct: 201 MSSCKEGDSGDAKVHQFLAGSIHQAFRSILDKFSASQEFLLKSTLSNKRRRVDSFKPSLS 260

Query: 251 SPMGDFW 254
           S  GD W
Sbjct: 261 SSSGDLW 267

BLAST of Cla013532 vs. NCBI nr
Match: gi|659113085|ref|XP_008456426.1| (PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis melo])

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-129
Identity = 241/253 (95.26%), Postives = 246/253 (97.23%), Query Frame = 1

Query: 1   MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAAL 60
           M HFSQIYSYDGFCA+SA+MRNGS STSSLVLDSERDELVEAPLKLE KGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNG 180
           PKEIDEITVE QEDGFNG+PYSIRASLCC+YKPGLLPDLRRALHALDLII+RAEIATLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240
           RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 FNSSSSSPMGDFW 254
           FNSSSSS  GDFW
Sbjct: 241 FNSSSSSSRGDFW 252

BLAST of Cla013532 vs. NCBI nr
Match: gi|659113087|ref|XP_008456427.1| (PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 5.2e-128
Identity = 240/252 (95.24%), Postives = 245/252 (97.22%), Query Frame = 1

Query: 1   MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAAL 60
           M HFSQIYSYDGFCA+SA+MRNGS STSSLVLDSERDELVEAPLKLE KGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNG 180
           PKEIDEITVE QEDGFNG+PYSIRASLCC+YKPGLLPDLRRALHALDLII+RAEIATLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240
           RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 FNSSSSSPMGDF 253
           FNSSSSS  GDF
Sbjct: 241 FNSSSSSSRGDF 251

BLAST of Cla013532 vs. NCBI nr
Match: gi|449463302|ref|XP_004149373.1| (PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis sativus])

HSP 1 Score: 464.9 bits (1195), Expect = 8.8e-128
Identity = 239/253 (94.47%), Postives = 244/253 (96.44%), Query Frame = 1

Query: 1   MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAAL 60
           M HFSQIYSYDGFCANSA+MRNGS STSSLVLDSERDELVEAPLKLE KGVPAERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCANSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARIN HLG LRSLVPGGKKMDKATLLAEVISHL VLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINDHLGILRSLVPGGKKMDKATLLAEVISHLNVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNG 180
           P+E DEITVE QEDGFNG+PYSIRASLCC+YKPGLLPDLRRALHALDLII+RAEIATLNG
Sbjct: 121 PEESDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240
           RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 FNSSSSSPMGDFW 254
           FNSSSSS MGDFW
Sbjct: 241 FNSSSSSSMGDFW 252

BLAST of Cla013532 vs. NCBI nr
Match: gi|778714150|ref|XP_011657193.1| (PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 1.7e-126
Identity = 238/252 (94.44%), Postives = 243/252 (96.43%), Query Frame = 1

Query: 1   MTHFSQIYSYDGFCANSAAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAAL 60
           M HFSQIYSYDGFCANSA+MRNGS STSSLVLDSERDELVEAPLKLE KGVPAERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCANSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120
           KNHSEAERRRRARIN HLG LRSLVPGGKKMDKATLLAEVISHL VLKRAAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINDHLGILRSLVPGGKKMDKATLLAEVISHLNVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNG 180
           P+E DEITVE QEDGFNG+PYSIRASLCC+YKPGLLPDLRRALHALDLII+RAEIATLNG
Sbjct: 121 PEESDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240
           RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 FNSSSSSPMGDF 253
           FNSSSSS MGDF
Sbjct: 241 FNSSSSSSMGDF 251

BLAST of Cla013532 vs. NCBI nr
Match: gi|225446577|ref|XP_002280074.1| (PREDICTED: transcription factor bHLH30 [Vitis vinifera])

HSP 1 Score: 302.0 bits (772), Expect = 9.9e-79
Identity = 157/247 (63.56%), Postives = 189/247 (76.52%), Query Frame = 1

Query: 11  DGFCANS---AAMRNGSASTSSLVLDSERDELVEAPLKLEIKGVPAERSAAALKNHSEAE 70
           DGF  NS   A +R GS+S+S LVLDSER ELV AP +L    V AE++  ALKNHSEAE
Sbjct: 13  DGFSENSGYGAIIRGGSSSSSLLVLDSERGELVRAPARLGPNEVKAEKAMVALKNHSEAE 72

Query: 71  RRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHIIPKEIDEI 130
           RRRR RIN HL +LR ++PG KKMDKA+LL EV+SHLK LKR+AAE+S   ++P +IDE+
Sbjct: 73  RRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKGFLVPMDIDEV 132

Query: 131 TVEQQEDGFNGLPYSIRASLCCEYKPGLLPDLRRALHALDLIIKRAEIATLNGRMKNVFV 190
            VEQQE G +  PYSI+ASLCC+YKPG+L DLRRAL  + L   RAEIATL GRMKNVFV
Sbjct: 133 RVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFV 192

Query: 191 LTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSF-MTFPNKRRRISLFNSSSS 250
           +T CK+GN+E TE R+    SVHQA++SVL+KF   Q+FS   T  NKR+RIS+FNSSSS
Sbjct: 193 MTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRISIFNSSSS 252

Query: 251 SPMGDFW 254
           SP GDFW
Sbjct: 253 SPFGDFW 259

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BH030_ARATH4.1e-3241.58Transcription factor bHLH30 OS=Arabidopsis thaliana GN=BHLH30 PE=1 SV=1[more]
BH032_ARATH2.1e-2839.06Transcription factor AIG1 OS=Arabidopsis thaliana GN=BHLH32 PE=1 SV=1[more]
BH106_ARATH1.5e-2642.94Transcription factor bHLH106 OS=Arabidopsis thaliana GN=BHLH106 PE=2 SV=1[more]
BH107_ARATH1.8e-2441.07Putative transcription factor bHLH107 OS=Arabidopsis thaliana GN=BHLH107 PE=2 SV... [more]
BH051_ARATH5.5e-2136.65Transcription factor bHLH51 OS=Arabidopsis thaliana GN=BHLH51 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KFN8_CUCSA6.2e-12894.47Uncharacterized protein OS=Cucumis sativus GN=Csa_6G227540 PE=4 SV=1[more]
F6H4Y9_VITVI6.9e-7963.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0028g02350 PE=4 SV=... [more]
K7LW62_SOYBN1.4e-7664.88Uncharacterized protein OS=Glycine max GN=GLYMA_12G209900 PE=4 SV=1[more]
A0A0B2R6Y4_GLYSO1.4e-7664.88Transcription factor bHLH30 OS=Glycine soja GN=glysoja_007666 PE=4 SV=1[more]
B9IQN9_POPTR1.2e-7562.35Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s11870g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659113085|ref|XP_008456426.1|2.7e-12995.26PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis melo][more]
gi|659113087|ref|XP_008456427.1|5.2e-12895.24PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis melo][more]
gi|449463302|ref|XP_004149373.1|8.8e-12894.47PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis sativus][more]
gi|778714150|ref|XP_011657193.1|1.7e-12694.44PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis sativus][more]
gi|225446577|ref|XP_002280074.1|9.9e-7963.56PREDICTED: transcription factor bHLH30 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla013532Cla013532.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 62..131
score: 4.2
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 61..107
score: 6.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 64..113
score: 1.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 58..107
score: 15
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 62..114
score: 1.27
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 146..198
score: 5.
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 9..247
score: 1.5E
NoneNo IPR availablePANTHERPTHR12565:SF82SUBFAMILY NOT NAMEDcoord: 9..247
score: 1.5E

The following gene(s) are paralogous to this gene:

None