Carg18470 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg18470
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Transcription factor bHLH30
Location	Cucurbita_argyrosperma_scaffold_161 : 435983 .. 438233 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCCGCCGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTTAGAAGTCTCGTCCCCGGTGGTAAGAAGGTGGGTGTTTTTGTTTTTCTGCCATTTTTGGTTATTAGGGATTTTGATTGAGCTCTGTTTCAGTTTGTGTTCATTTTGAATTTGGGGTTTTACTTTTGTCTTCATTAATATAGCTCCAAGACTCTGTTTATGGTAAGGACGTCTCAAATGTCCTGATTAGGATATGCTTGTAGGGTTGTTTATGCCTGGTTTGCTCTAGAAATGGTGAAATTCATTTAAACTTTTGTTTGTTCATTCATATTGCTTGCTTGTTTTGGTGTTGGCTGACATGATCAGTGATCGCTATATGAGTATAAGATGTCAACCATTTGACTCTAAATTGTATGAATGAATTTTCCTGTTCATGAGTGGTGAAGACATCATCTCACTGAAGGCATCTGTTAAGTTACTTCTGTAACTCTTCCATGATGTTGTTTGTCTTTCTGGTTGAGGATCGTTGGGAGAGGAGTCCCACATCAGGTAATTAAGGGATTGATCGTGGGTTTAGAGGAGTCCCACATTGGCTAATTAAGGGGTTGATCATGAGTTTAGAAAAGTCCCACATTGGCTAAGTAAGGAGTTGATCATGGGTTTCGAGGAGTCCCACATCGACTAATTAAGGAGTTGAACATGGGTTTCGAGGAGTCCCACATCGACTAATTAAGGAGTTGAACATGGGTTTCGAGGAGCCCCACATCGACTAATTAAAGAGTTGACCATGGGTTTCGAGGAGTCCCACATCGACTAATTAAGGAGTTGATCATGGGTTTCGAGGATTCCCACGTTGGCTAATTAAGGGGTTGATCATGGGTTAGGTAAGAAATACATCTCCATTAGTATATGAGACCTTCTAAGGAAACTAAAAAATAAAGTCATGAGAGATTATACTCAAAGTGAACGACATCATACCATTGTGGAGACCGGTGGTTTCTAACATGGTATCAGAGTCATGCCCTTAACTTAGCTATGATAATAGAATCCTCAAAATGTCGAACAAAGAAGTTGTGAGCCTCAAAGATGTAGTTAAAAGTGACTCAAGTGTGTAAAAACAAAGGGTGTACTTTGTTCAAGGGCTCTAGAGAATGAGTCAAGCCTCGATGAAAGGGAGGCTGTTTGAGGGCTCCATAGGCTTCAGGGGAGGCTCTATTGTGTACTTTGTTCGAGGGGAGAGGAGTCCCACATCGGCTAATTAAGGGGTTGACCATGAGTTTATAGGTAAGAAATAAGTCTCCATTGGTATAAGACCTTTAGAGGAAATAAAAAATGAAGTCACGAGAGCTTATACCCAAAGTGGACAATATCATACCATTGAACTCTTATGAATGCTTGCCACGAGTATCGTCACCCTGACTTTCTGTGTGTTCAATGACCAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAGGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGTGAGCATATGATTTCTTTTTACTGGTTTTTGCATCTCTTGGGAAGTCAACAGGATAAGTGAGTTGGATATTGCTAAGCCTCACTTATGCATTGAGAAGGATCCGGGATTCGAGCTGGGGTTGAAGTTAGCCCTAGTGATCCGATGGTGCTAA

mRNA sequence

ATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCCGCCGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTTAGAAGTCTCGTCCCCGGTGGTAAGAAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAGGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGATAAGTGAGTTGGATATTGCTAAGCCTCACTTATGCATTGAGAAGGATCCGGGATTCGAGCTGGGGTTGAAGTTAGCCCTAGTGATCCGATGGTGCTAA

Coding sequence (CDS)

ATGGGTCAGTTCTCGCGGATTTGCTCTTACGATGGGGTTTGCGCTAACTCTGCTGCGATGAGAAATGGGTCGGCCTCAACTTCTTCATTGGTGCTCGATAGTGAGAGAGATGAGCTCATCGAGGCACCATTGAAGCTTGAGAGTAAAGGGGTTCCGGCTGAGAGGAGCGCCGCCGCGCTGAAGAACCACAGCGAGGCTGAGAGAAGGCGTAGAGCAAGAATCAATGGTCATCTTGGGAGTCTTAGAAGTCTCGTCCCCGGTGGTAAGAAGATGGACAAAGCAACACTGCTAGCTGAAGTAATAAGCCATCTGAAAGTGCTGAAAGGAGCTGCTGCAGAAGTTAGTGATGCCCATATTATACCAAAAGAAATCGATGAAATAACAGTTGAACACCAGGAGGATGAATTCGACGGCGTTTCGTATTCGATTCGAGCGTCGCTATGTTGTGATTATAAACCCGGCCTCCTACCCGATTTAAGACGGGCACTTCATGCTCTAGACCTGATAATAAAGAGGGCGGAGATTGGAACCTTAAATGGCAGGATGCAGAACGTGTTGGTGTTAACCAGCTGCAAAGATGGAGATATTGAAACTACTGAATTGCAGACCTCCGTGCACCAAGCCATCAAATCTGTTCTAAACAACTTCTCTGATCCACAAGAGTTCTCGTTTATGGCGTTTCCAAACAAGAGACGGCGAATTTCGCTGCTCGGTTCATCGAGCTCGTCTTCCATGGGCGATTTCTGGATAAGTGAGTTGGATATTGCTAAGCCTCACTTATGCATTGAGAAGGATCCGGGATTCGAGCTGGGGTTGAAGTTAGCCCTAGTGATCCGATGGTGCTAA

Protein sequence

MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSSSSSSMGDFWISELDIAKPHLCIEKDPGFELGLKLALVIRWC

Homology

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BLAST of Carg18470 vs. NCBI nr
Match: XP_022944660.1 (transcription factor bHLH30-like [Cucurbita moschata])

HSP 1 Score: 477.2 bits (1227), Expect = 3.7e-131
Identity = 248/249 (99.60%), Postives = 248/249 (99.60%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

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BLAST of Carg18470 vs. NCBI nr
Match: XP_023512593.1 (transcription factor bHLH30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 471.1 bits (1211), Expect = 2.7e-129
Identity = 244/249 (97.99%), Postives = 246/249 (98.80%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDGVCANSA +RNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGVCANSAVIRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKE+DEITVEHQED FDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEVDEITVEHQEDGFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSSMGDFW
Sbjct: 241 SSSSMGDFW 249

[Close]

BLAST of Carg18470 vs. NCBI nr
Match: XP_022986021.1 (transcription factor bHLH30-like [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 6.3e-123
Identity = 238/249 (95.58%), Postives = 240/249 (96.39%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MGQFSRICSYDG CANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL
Sbjct: 1   MGQFSRICSYDGFCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVEHQED FD     IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG
Sbjct: 121 PKEIDEITVEHQEDGFD-----IRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISLLGSS 240
           RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSD QEFSFMAFPNKR+RISLLGSS
Sbjct: 181 RMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFSDSQEFSFMAFPNKRQRISLLGSS 240

Query: 241 SSSSMGDFW 250
           SSSS+GDFW
Sbjct: 241 SSSSVGDFW 244

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BLAST of Carg18470 vs. NCBI nr
Match: XP_008456426.1 (PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis melo])

HSP 1 Score: 421.0 bits (1081), Expect = 3.2e-114
Identity = 224/254 (88.19%), Postives = 234/254 (92.13%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDFWI 251
             SSSSSS GDFWI
Sbjct: 241 FNSSSSSSRGDFWI 253

[Close]

BLAST of Carg18470 vs. NCBI nr
Match: XP_008456427.1 (PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis melo])

HSP 1 Score: 414.8 bits (1065), Expect = 2.3e-112
Identity = 222/252 (88.10%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDF 249
             SSSSSS GDF
Sbjct: 241 FNSSSSSSRGDF 251

[Close]

BLAST of Carg18470 vs. TAIR10
Match: AT1G68810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 73/172 (42.44%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           K+ ++ +   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219

Query: 105 KVLKGAAAEVSDAHIIPKEIDEITVEHQEDEFDGVS-YSIRASLCCDYKPGLLPDLRRAL 164
           K LK   + +S+ +++P E DE+TV   E+E  G   + I+ASLCC+ +  LLPD+ + L
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTL 279

Query: 165 HALDLIIKRAEIGTLNGRMQNVLVLTSCKDG--DIETTELQTSVHQAIKSVL 214
            A+ L   +AEI T+ GR++NVL +T  +    ++E      ++ +A+K+V+
Sbjct: 280 KAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVM 331

[Close]

BLAST of Carg18470 vs. TAIR10
Match: AT2G41130.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-26
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 43  PLKLESKG--VPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEV 102
           PL +   G  +  +R+ AAL+NH EAERRRR RIN HL  LR+++    K DKATLLA+V
Sbjct: 49  PLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKV 108

Query: 103 ISHLKVLKGAAAEVSDAH--IIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPD 162
           +  ++ LK    E SD+   ++P E DEI+V H  D  +      +ASLCC+ +  LLPD
Sbjct: 109 VQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPD 168

Query: 163 LRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVL 214
           L   L +L++   RAE+ T+ GR ++VLV+ +  D ++   E    +  A+KS+L
Sbjct: 169 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA--DKEMHGVESVHFLQNALKSLL 221

[Close]

BLAST of Carg18470 vs. TAIR10
Match: AT3G56770.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 105.5 bits (262), Expect = 5.3e-23
Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAE 113
           +++ A+L+NH EAER+RRARIN HL  LR L+    K DK+TLLA+V+  +K LK    E
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 114 VSDAHIIPKEIDEITVEHQEDEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLIIK 173
           ++D   IP E DEI+V + ED   G    I  + S CC+ +P LL DL   L +L +   
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 174 RAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
            A++ T+ GR +NVLV+ +  D +    +    +  A+KS+L   S
Sbjct: 160 FADMTTVGGRTRNVLVVAA--DKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of Carg18470 vs. TAIR10
Match: AT3G25710.1 (basic helix-loop-helix 32)

HSP 1 Score: 99.0 bits (245), Expect = 5.0e-21
Identity = 57/145 (39.31%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           KL ++ V   ++ AA K+          RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 118 KLSAQEVMDAKALAASKSXXXXXXXXXERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177

Query: 105 KVLKGAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALH 164
           K LK   ++++D + +P E D++TV+   ++ +G +  IRAS CC  +  L+ D+  AL 
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEG-NLVIRASFCCQDRTDLMHDVINALK 237

Query: 165 ALDLIIKRAEIGTLNGRMQNVLVLT 190
           +L L   +AEI T+ GR++N+L L+
Sbjct: 238 SLRLRTLKAEIATVGGRVKNILFLS 261

[Close]

BLAST of Carg18470 vs. TAIR10
Match: AT2G40200.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-19
Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAE 113
           E++ +  ++H  AE+RRR RIN HL +LR LVP   K+DKA LLA VI  +K LK  AAE
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 114 VSDAHIIPKEIDEITVEHQE-DEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLII 173
                 +P E DE+TV+ +   +F+  + +I  +AS CC+ +P  + ++ R L  L L  
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 174 KRAEIGTLNGRMQNVLVLTSCKDGDI-ETTELQTS---VHQAIKSVLNNF--SDPQEFSF 233
            +AEI ++ GRM+   +L   KD +  ETT +  S   + Q++ S LN    S     S 
Sbjct: 178 IQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSV 237

[Close]

BLAST of Carg18470 vs. Swiss-Prot
Match: sp|Q9S7Y1|BH030_ARATH (Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 4.8e-29
Identity = 73/172 (42.44%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           K+ ++ +   ++ AA K+HSEAERRRR RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 160 KMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHV 219

Query: 105 KVLKGAAAEVSDAHIIPKEIDEITVEHQEDEFDGVS-YSIRASLCCDYKPGLLPDLRRAL 164
           K LK   + +S+ +++P E DE+TV   E+E  G   + I+ASLCC+ +  LLPD+ + L
Sbjct: 220 KELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTL 279

Query: 165 HALDLIIKRAEIGTLNGRMQNVLVLTSCKDG--DIETTELQTSVHQAIKSVL 214
            A+ L   +AEI T+ GR++NVL +T  +    ++E      ++ +A+K+V+
Sbjct: 280 KAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVM 331

[Close]

BLAST of Carg18470 vs. Swiss-Prot
Match: sp|O80674|BH106_ARATH (Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.1e-25
Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 0


Query: 43  PLKLESKG--VPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEV 102
           PL +   G  +  +R+ AAL+NH EAERRRR RIN HL  LR+++    K DKATLLA+V
Sbjct: 49  PLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKV 108

Query: 103 ISHLKVLKGAAAEVSDAH--IIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPD 162
           +  ++ LK    E SD+   ++P E DEI+V H  D  +      +ASLCC+ +  LLPD
Sbjct: 109 VQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPD 168

Query: 163 LRRALHALDLIIKRAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVL 214
           L   L +L++   RAE+ T+ GR ++VLV+ +  D ++   E    +  A+KS+L
Sbjct: 169 LMEILKSLNMKTLRAEMVTIGGRTRSVLVVAA--DKEMHGVESVHFLQNALKSLL 221

[Close]

BLAST of Carg18470 vs. Swiss-Prot
Match: sp|Q9LET0|BH107_ARATH (Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.6e-22
Identity = 67/166 (40.36%), Postives = 98/166 (59.04%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAE 113
           +++ A+L+NH EAER+RRARIN HL  LR L+    K DK+TLLA+V+  +K LK    E
Sbjct: 40  DKALASLRNHKEAERKRRARINSHLNKLRKLLSCNSKTDKSTLLAKVVQRVKELKQQTLE 99

Query: 114 VSDAHIIPKEIDEITVEHQEDEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLIIK 173
           ++D   IP E DEI+V + ED   G    I  + S CC+ +P LL DL   L +L +   
Sbjct: 100 ITD-ETIPSETDEISVLNIEDCSRGDDRRIIFKVSFCCEDRPELLKDLMETLKSLQMETL 159

Query: 174 RAEIGTLNGRMQNVLVLTSCKDGDIETTELQTSVHQAIKSVLNNFS 218
            A++ T+ GR +NVLV+ +  D +    +    +  A+KS+L   S
Sbjct: 160 FADMTTVGGRTRNVLVVAA--DKEHHGVQSVNFLQNALKSLLERSS 202

[Close]

BLAST of Carg18470 vs. Swiss-Prot
Match: sp|Q9LS08|BH032_ARATH (Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 9.0e-20
Identity = 57/145 (39.31%), Postives = 89/145 (61.38%), Query Frame = 0


Query: 45  KLESKGVPAERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHL 104
           KL ++ V   ++ AA K+          RIN HL  LRS++P   K DKA+LLAEVI H+
Sbjct: 118 KLSAQEVMDAKALAASKSXXXXXXXXXERINTHLAKLRSILPNTTKTDKASLLAEVIQHM 177

Query: 105 KVLKGAAAEVSDAHIIPKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALH 164
           K LK   ++++D + +P E D++TV+   ++ +G +  IRAS CC  +  L+ D+  AL 
Sbjct: 178 KELKRQTSQITDTYQVPTECDDLTVDSSYNDEEG-NLVIRASFCCQDRTDLMHDVINALK 237

Query: 165 ALDLIIKRAEIGTLNGRMQNVLVLT 190
           +L L   +AEI T+ GR++N+L L+
Sbjct: 238 SLRLRTLKAEIATVGGRVKNILFLS 261

[Close]

BLAST of Carg18470 vs. Swiss-Prot
Match: sp|Q9XEF0|BH051_ARATH (Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.2e-18
Identity = 71/189 (37.57%), Postives = 106/189 (56.08%), Query Frame = 0


Query: 54  ERSAAALKNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAE 113
           E++ +  ++H  AE+RRR RIN HL +LR LVP   K+DKA LLA VI  +K LK  AAE
Sbjct: 58  EKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE 117

Query: 114 VSDAHIIPKEIDEITVEHQE-DEFDGVSYSI--RASLCCDYKPGLLPDLRRALHALDLII 173
                 +P E DE+TV+ +   +F+  + +I  +AS CC+ +P  + ++ R L  L L  
Sbjct: 118 SPIFQDLPTEADEVTVQPETISDFESNTNTIIFKASFCCEDQPEAISEIIRVLTKLQLET 177

Query: 174 KRAEIGTLNGRMQNVLVLTSCKDGDI-ETTELQTS---VHQAIKSVLNNF--SDPQEFSF 233
            +AEI ++ GRM+   +L   KD +  ETT +  S   + Q++ S LN    S     S 
Sbjct: 178 IQAEIISVGGRMRINFIL---KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSV 237

[Close]

BLAST of Carg18470 vs. TrEMBL
Match: tr|A0A1S3C3W5|A0A1S3C3W5_CUCME (transcription factor bHLH30-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496369 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.1e-114
Identity = 224/254 (88.19%), Postives = 234/254 (92.13%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDFWI 251
             SSSSSS GDFWI
Sbjct: 241 FNSSSSSSRGDFWI 253

[Close]

BLAST of Carg18470 vs. TrEMBL
Match: tr|A0A1S3C4H4|A0A1S3C4H4_CUCME (transcription factor bHLH30-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496369 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.5e-112
Identity = 222/252 (88.10%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CA+SA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVP ERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCASSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPTERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           PKEIDEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PKEIDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDF 249
             SSSSSS GDF
Sbjct: 241 FNSSSSSSRGDF 251

[Close]

BLAST of Carg18470 vs. TrEMBL
Match: tr|A0A0A0KFN8|A0A0A0KFN8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G227540 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.0e-112
Identity = 221/253 (87.35%), Postives = 231/253 (91.30%), Query Frame = 0


Query: 1   MGQFSRICSYDGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAAL 60
           MG FS+I SYDG CANSA+MRNGS STSSLVLDSERDEL+EAPLKLESKGVPAERSAAAL
Sbjct: 1   MGHFSQIYSYDGFCANSASMRNGSVSTSSLVLDSERDELVEAPLKLESKGVPAERSAAAL 60

Query: 61  KNHSEAERRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHII 120
           KNHSEAERRRRARIN HLG LRSLVPGGKKMDKATLLAEVISHL VLK AAAEVSDAHII
Sbjct: 61  KNHSEAERRRRARINDHLGILRSLVPGGKKMDKATLLAEVISHLNVLKRAAAEVSDAHII 120

Query: 121 PKEIDEITVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNG 180
           P+E DEITVE QED F+GV YSIRASLCCDYKPGLLPDLRRALHALDLII+RAEI TLNG
Sbjct: 121 PEESDEITVE-QEDGFNGVPYSIRASLCCDYKPGLLPDLRRALHALDLIIQRAEIATLNG 180

Query: 181 RMQNVLVLTSCKDGDIETTE----LQTSVHQAIKSVLNNFSDPQEFSFMAFPNKRRRISL 240
           RM+NV VLTSCK+G+IETTE    L+TSVHQAIKSVLN FSDPQEFSFM FPNKRRRISL
Sbjct: 181 RMKNVFVLTSCKEGNIETTELRRFLETSVHQAIKSVLNKFSDPQEFSFMTFPNKRRRISL 240

Query: 241 LGSSSSSSMGDFW 250
             SSSSSSMGDFW
Sbjct: 241 FNSSSSSSMGDFW 252

[Close]

BLAST of Carg18470 vs. TrEMBL
Match: tr|A0A2P4I6H9|A0A2P4I6H9_QUESU (Transcription factor aig1 OS=Quercus suber OX=58331 GN=CFP56_08480 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.0e-69
Identity = 150/240 (62.50%), Postives = 183/240 (76.25%), Query Frame = 0


Query: 11  DGVCANSAAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAALKNHSEAERRR 70
           D +  NS+ +RNGS S+SSLVLDSER +L+EA +KLE KG  AER+ AALK+H EAERRR
Sbjct: 21  DELLVNSSMVRNGSDSSSSLVLDSERSQLVEARMKLERKGGTAERTIAALKSHCEAERRR 80

Query: 71  RARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHIIPKEIDEITVE 130
           RARIN HL +LR LVPG KKMDKA+LLAEVISH+K LK +A E SD  +IP + DE+ VE
Sbjct: 81  RARINSHLDTLRGLVPGAKKMDKASLLAEVISHMKELKRSAEEASDGFVIPMDFDEVIVE 140

Query: 131 HQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNGRMQNVLVLTS 190
            +ED FDG  YSIRASLCCD+KPGLL DL++AL  L LII RAEI TL GRM+NVLV+T+
Sbjct: 141 -REDGFDGDPYSIRASLCCDFKPGLLSDLKQALSGLHLIIIRAEIATLGGRMKNVLVMTN 200

Query: 191 CKDGDIETTELQTSVHQAIKSVLNNFSDPQEFSF-MAFPNKRRRISLLGSSSSSSMGDFW 250
            K+G++  +E    V QA++SVL+ FS  QEF     F NKR+RIS+   SSSSS+GD W
Sbjct: 201 HKEGEVNHSE----VRQALRSVLDKFSGSQEFLLGTTFSNKRQRISIFNCSSSSSLGDVW 255

[Close]

BLAST of Carg18470 vs. TrEMBL
Match: tr|F6H4Y9|F6H4Y9_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g02350 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 144/247 (58.30%), Postives = 177/247 (71.66%), Query Frame = 0


Query: 11  DGVCANS---AAMRNGSASTSSLVLDSERDELIEAPLKLESKGVPAERSAAALKNHSEAE 70
           DG   NS   A +R GS+S+S LVLDSER EL+ AP +L    V AE++  ALKNHSEAE
Sbjct: 13  DGFSENSGYGAIIRGGSSSSSLLVLDSERGELVRAPARLGPNEVKAEKAMVALKNHSEAE 72

Query: 71  RRRRARINGHLGSLRSLVPGGKKMDKATLLAEVISHLKVLKGAAAEVSDAHIIPKEIDEI 130
           RRRR RIN HL +LR ++PG KKMDKA+LL EV+SHLK LK +AAE+S   ++P +IDE+
Sbjct: 73  RRRRGRINAHLATLRGIIPGTKKMDKASLLGEVVSHLKELKRSAAEISKGFLVPMDIDEV 132

Query: 131 TVEHQEDEFDGVSYSIRASLCCDYKPGLLPDLRRALHALDLIIKRAEIGTLNGRMQNVLV 190
            VE QE   D   YSI+ASLCCDYKPG+L DLRRAL  + L   RAEI TL GRM+NV V
Sbjct: 133 RVEQQEGGLDEAPYSIKASLCCDYKPGVLSDLRRALDTVHLKTVRAEIATLGGRMKNVFV 192

Query: 191 LTSCKDGDIETTELQ----TSVHQAIKSVLNNFSDPQEFSFMA-FPNKRRRISLLGSSSS 250
           +T CKDG++E TE +     SVHQA++SVL+ F   Q+FS  +   NKR+RIS+  SSSS
Sbjct: 193 MTGCKDGNLEDTETRKLHANSVHQALRSVLDKFPASQDFSSRSTSSNKRQRISIFNSSSS 252

The following BLAST results are available for this feature:

BLAST of Carg18470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944660.1	3.7e-131	99.60	transcription factor bHLH30-like [Cucurbita moschata]	[more]
XP_023512593.1	2.7e-129	97.99	transcription factor bHLH30-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986021.1	6.3e-123	95.58	transcription factor bHLH30-like [Cucurbita maxima]	[more]
XP_008456426.1	3.2e-114	88.19	PREDICTED: transcription factor bHLH30-like isoform X1 [Cucumis melo]	[more]
XP_008456427.1	2.3e-112	88.10	PREDICTED: transcription factor bHLH30-like isoform X2 [Cucumis melo]	[more]

BLAST of Carg18470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68810.1	2.6e-30	42.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G41130.1	3.9e-26	41.14	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G56770.1	5.3e-23	40.36	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G25710.1	5.0e-21	39.31	basic helix-loop-helix 32	[more]
AT2G40200.1	1.2e-19	37.57	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg18470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9S7Y1\|BH030_ARATH	4.8e-29	42.44	Transcription factor bHLH30 OS=Arabidopsis thaliana OX=3702 GN=BHLH30 PE=1 SV=1	[more]
sp\|O80674\|BH106_ARATH	7.1e-25	41.14	Transcription factor bHLH106 OS=Arabidopsis thaliana OX=3702 GN=BHLH106 PE=2 SV=...	[more]
sp\|Q9LET0\|BH107_ARATH	9.6e-22	40.36	Putative transcription factor bHLH107 OS=Arabidopsis thaliana OX=3702 GN=BHLH107...	[more]
sp\|Q9LS08\|BH032_ARATH	9.0e-20	39.31	Transcription factor AIG1 OS=Arabidopsis thaliana OX=3702 GN=BHLH32 PE=1 SV=1	[more]
sp\|Q9XEF0\|BH051_ARATH	2.2e-18	37.57	Transcription factor bHLH51 OS=Arabidopsis thaliana OX=3702 GN=BHLH51 PE=2 SV=1	[more]

BLAST of Carg18470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3W5\|A0A1S3C3W5_CUCME	2.1e-114	88.19	transcription factor bHLH30-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A1S3C4H4\|A0A1S3C4H4_CUCME	1.5e-112	88.10	transcription factor bHLH30-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A0A0KFN8\|A0A0A0KFN8_CUCSA	2.0e-112	87.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G227540 PE=4 SV=1	[more]
tr\|A0A2P4I6H9\|A0A2P4I6H9_QUESU	6.0e-69	62.50	Transcription factor aig1 OS=Quercus suber OX=58331 GN=CFP56_08480 PE=4 SV=1	[more]
tr\|F6H4Y9\|F6H4Y9_VITVI	1.2e-66	58.30	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g02350 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg18470-RA	Carg18470-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 64..113 e-value: 3.1E-12 score: 56.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 61..107 e-value: 6.5E-10 score: 38.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 58..107 score: 15.726
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 54..118 e-value: 5.3E-15 score: 56.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 62..113
None	No IPR available	PANTHER	PTHR12565:SF82	SUBFAMILY NOT NAMED	coord: 11..227
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 11..227

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg18470	Cla013532	Watermelon (97103) v1	carwmB0412
Carg18470	MELO3C019758	Melon (DHL92) v3.5.1	carmeB0418
Carg18470	ClCG02G017920	Watermelon (Charleston Gray)	carwcgB0408
Carg18470	CmaCh20G002200	Cucurbita maxima (Rimu)	carcmaB0575
Carg18470	CmaCh02G000790	Cucurbita maxima (Rimu)	carcmaB0577
Carg18470	CmoCh02G000770	Cucurbita moschata (Rifu)	carcmoB0561
Carg18470	CmoCh20G002390	Cucurbita moschata (Rifu)	carcmoB0559
Carg18470	Lsi10G015870	Bottle gourd (USVL1VR-Ls)	carlsiB377
Carg18470	Cp4.1LG05g15220	Cucurbita pepo (Zucchini)	carcpeB0581
Carg18470	Cp4.1LG16g07530	Cucurbita pepo (Zucchini)	carcpeB0579
Carg18470	Cla97C02G043700	Watermelon (97103) v2	carwmbB0438
Carg18470	Bhi10G000826	Wax gourd	carwgoB0500

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg18470	Carg13604	Silver-seed gourd	carcarB032

The following block(s) are covering this gene:


Gene	Organism	Block
Carg18470	Cucurbita maxima (Rimu)	carcmaB0574
Carg18470	Cucurbita moschata (Rifu)	carcmoB0558