Cp4.1LG09g07710 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGGCCCAAGATCAAGCCCAAGACCAAAACCAAGCCCAAGCCCAAGCCCAAGCCCAAGACCAAGCCCAAGCCTAAGCCATTAATTGAATAGCAGATTGAAACGCCCAACAGAAAATACGAGGGCGGTGCCATTCTTCTTCCCTTCGGTTCCCTTCCATTGATTCCATTTCTCTGATTCGCTCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGGTAGAGTTTCTTTTTAAGTGTTTTATCTCTTGCTTTCGATTCTTATGTTTTTGGTGTTTCTTGGTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTAGGAGACTTCAGGTGAAAACCGTTCGATATAGCTTTAAGAAATTGAAATTTCTTCCATGTTTTGTAGTGGTTTAGTTACCTTGGTCCTGTTCTATTTAATTCGAAGAACACTGAGACAAATAAGGGATTGTGATTGCGAGGGCTGCAGAGAAGGGGCTTATTGATGGAGAAAATGTGAAAGAAAAATATTCTTTTCGCGTGTAATGAAGGAATCGAGTTTATGGGCTAATGTTCTTGATATGTGCTTGCAATTAAAGGTCTAAAATCTATGCTGCGATGTTTCTGATTTCTGCGTTGTCCTGTTCTTGTGTGTATTTCCAAACCCTCTTAGGGTTTTATTTTGGAGTTCTGTTGAACACTCCACTTTTTACGTTCATATACATAGTCTTTGTGAATTTTCTCACATTTAGTCTGAAATACTTCGACTATATCCTGGTGGGTAGACCTAAGAATCAGACAGGAGTAAGATATACTTGCAATTTTACCAGCTATGGTGTTAGAAAATTGCTTTGAATTTATATAAACAGCCGCTTCTGCCAATTCATCTGGACTTTATTATCCCTTGGCGATTTATTTCAGCAACTTAAATTTGGACGAGTTTGGATGTTCATTTGATGTAACAATTTTCAAATTGTTTTCCCTTCTTGTTTTGCAGCTATGGCTACTTGTTTAGCTTACCATCTTTGCCTCCTTCCTTCTTGTTCGTTCTGTTTTGTGGTGTTCACTGATTACCAGAGTTTTTGACATCGTAAATTATACTTTTTGAATAAAGTACCATGGGTTAAATTAGGACCCATGTTATGAGTGATCACTCACTTGGATTCGATGTCCTACTATTGTCTCATGAGAATAGTCGAAGATGTATATAAGCTGACCCGTAAACTTACTGATTTCCAAAAGAAGGAGAATCTTTTTAACATAATAGAAAGTTGGTGAAGCATTTGCGTACGCGGTTTGCTTCTGAAACGTTTCTGTGTAGATGCTTATTCCGTTTGCTTTTCTATTGTTGACAATCCTTATTTTGTTTGTGAATGTAATGTTTAGTTTCCGGGTCCGTTCGTTACTTATAATTATAAATGGTTGCTTCACGAAGACATTGACAAAAGTTTCTACTTGCAAGTACTACATCTTTTGTATTTAATTGGTTGTTAACTTATGTCTCTATTGTCTTTTTGTTTTCACTTTCCCTCAGATTGGTTGATTTATTTTGTTCATGTTTGTTTCCCTCATTTTTTTAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCTAAATGGGAGGATCCTGTTTGTGCGAACGGAGGGAAATGGACTGTGAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGGTACTATGAACTGCACGTACAATTTGACACGAGCACAATATTTGAGACACTAGTCTTTTATCTCTAACAATCAGTTACTTCCATCCAGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGTAATAGCCACTAGACCAATAGTTTATATATACGGCCCACTAGATTTTCATCAATACAATACTCTGTTCTTGCACACGCAATGAACTTCATTTATGAACAATAATTTTACTCATGTTCAATGATGGAAATTGTTTACTGTTCGGATTCTGTTCGTTCATCAGTTAATGTCTCTGCATCCCGTTTTCCTTTTTCTGGTTAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGTATGTATGCTGCCACATAGGTTTCATTTGCATTTCTTATGGTTAGAACTCGAATCTTTTGTTTCGTGTTTCTGATATCATGTTGTTTCTTGTTCAGGACGATGCGAAGAAACTCGACAGACATGCGAAGAGCCGGTATACAGTATGATCGGGTACGGCAGGAGGATACTCGTCCGTCCTAAACGTGCAAAGCATGCTCTGCATCAGCATGTTAATGTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTGTGTGGAAATCGCCATTGCTGCACATAACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCATGAGATATGGAACAGGATGATGCTCCTCTACAATCAAATGATGTGTTTTAGCTTGGTCCGAATCGATATTCATTTCTTTTTATTAAAATTTGAACTCAGGTGATAAATTATATGAAATAACATGACATTGAAGTCGATCTTTAAACTAAAATCTCTT TGAAGGCCCAAGATCAAGCCCAAGACCAAAACCAAGCCCAAGCCCAAGCCCAAGCCCAAGACCAAGCCCAAGCCTAAGCCATTAATTGAATAGCAGATTGAAACGCCCAACAGAAAATACGAGGGCGGTGCCATTCTTCTTCCCTTCGGTTCCCTTCCATTGATTCCATTTCTCTGATTCGCTCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCTAAATGGGAGGATCCTGTTTGTGCGAACGGAGGGAAATGGACTGTGAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTCGACAGACATGCGAAGAGCCGGTATACAGTATGATCGGGTACGGCAGGAGGATACTCGTCCGTCCTAAACGTGCAAAGCATGCTCTGCATCAGCATGTTAATGTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTGTGTGGAAATCGCCATTGCTGCACATAACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCATGAGATATGGAACAGGATGATGCTCCTCTACAATCAAATGATGTGTTTTAGCTTGGTCCGAATCGATATTCATTTCTTTTTATTAAAATTTGAACTCAGGTGATAAATTATATGAAATAACATGACATTGAAGTCGATCTTTAAACTAAAATCTCTT ATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCTAAATGGGAGGATCCTGTTTGTGCGAACGGAGGGAAATGGACTGTGAACTTTTCAAGGGGCAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTCGACAGACATGCGAAGAGCCGGTATACAGTATGA MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV
BLAST of Cp4.1LG09g07710 vs. Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=1 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 4.2e-92 Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 1.3e-88 Identity = 159/236 (67.37%), Postives = 181/236 (76.69%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 7.0e-87 Identity = 152/224 (67.86%), Postives = 176/224 (78.57%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 309.7 bits (792), Expect = 2.8e-83 Identity = 144/212 (67.92%), Postives = 172/212 (81.13%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 281.6 bits (719), Expect = 8.0e-75 Identity = 122/188 (64.89%), Postives = 149/188 (79.26%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TrEMBL
Match: C7SG33_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus GN=eIF4E PE=2 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 2.1e-130 Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TrEMBL
Match: C7SG34_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus GN=eIF4E PE=2 SV=1) HSP 1 Score: 470.7 bits (1210), Expect = 1.0e-129 Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TrEMBL
Match: G1FG56_9ROSI (Eukaryotic translation initiation factor 4E OS=Citrullus mucosospermus GN=eIF4e PE=2 SV=1) HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-129 Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TrEMBL
Match: B0F6T5_CUCSA (Eukaryotic initiation factor 4E OS=Cucumis sativus GN=eIF4E PE=3 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-129 Identity = 219/235 (93.19%), Postives = 228/235 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TrEMBL
Match: A7KWF8_9ROSI (Translation initiation factor OS=Cucumis zeyherii GN=eIF4E PE=2 SV=1) HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128 Identity = 218/233 (93.56%), Postives = 226/233 (97.00%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TAIR10
Match: AT4G18040.1 (AT4G18040.1 eukaryotic translation initiation factor 4E) HSP 1 Score: 339.0 bits (868), Expect = 2.4e-93 Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TAIR10
Match: AT1G29590.2 (AT1G29590.2 Eukaryotic initiation factor 4E protein) HSP 1 Score: 281.2 bits (718), Expect = 5.9e-76 Identity = 121/188 (64.36%), Postives = 149/188 (79.26%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TAIR10
Match: AT1G29550.1 (AT1G29550.1 Eukaryotic initiation factor 4E protein) HSP 1 Score: 279.3 bits (713), Expect = 2.3e-75 Identity = 121/188 (64.36%), Postives = 148/188 (78.72%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TAIR10
Match: AT5G35620.1 (AT5G35620.1 Eukaryotic initiation factor 4E protein) HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53 Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. TAIR10
Match: AT5G18110.1 (AT5G18110.1 novel cap-binding protein) HSP 1 Score: 122.1 bits (305), Expect = 4.6e-28 Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. NCBI nr
Match: gi|224999213|gb|ACN51299.1| (eukaryotic translation inititation factor 4E [Citrullus lanatus]) HSP 1 Score: 473.0 bits (1216), Expect = 3.0e-130 Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. NCBI nr
Match: gi|224483518|gb|ACN51300.1| (eukaryotic translation inititation factor 4E [Citrullus lanatus]) HSP 1 Score: 470.7 bits (1210), Expect = 1.5e-129 Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. NCBI nr
Match: gi|341867156|gb|AEK98516.1| (eukaryotic translation initiation factor 4E [Citrullus mucosospermus]) HSP 1 Score: 470.3 bits (1209), Expect = 2.0e-129 Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. NCBI nr
Match: gi|449459326|ref|XP_004147397.1| (PREDICTED: eukaryotic translation initiation factor 4E-1 [Cucumis sativus]) HSP 1 Score: 469.9 bits (1208), Expect = 2.5e-129 Identity = 219/235 (93.19%), Postives = 228/235 (97.02%), Query Frame = 1
BLAST of Cp4.1LG09g07710 vs. NCBI nr
Match: gi|151580041|gb|ABS18380.1| (translation initiation factor [Cucumis zeyherii]) HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-128 Identity = 218/233 (93.56%), Postives = 226/233 (97.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|