ClCG03G007240 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCCAAAATCCTACGGAAGAAAATCAAAATCCTACGGAAGGCCGACTCAAACTCCTAACAGAAAATCCGAGGGCGGTGCCATTCTTCGGTTCCTTCCATTGATTCGATTCTTCAGATACGCTCAATTCCACAAGTAGTGAAAGGAAAATGGTAGTCGAAGAGACGATCAAAGCTACATCCACGGAAGATCTTTCTAATACCATTGCAAATCAAAACCCTAGAGGACGAGGCGGTGATGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGAGACGACGACCTTGACTCGTCCAATTTGTCGGCGGCGATAGTGCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCTAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACTGTTGAGGAGTTTTGGAGGTAGAACTTCATTTTTTTTTTTTTTTTTTTTTAAAATTTTCCTCTTGCTTTCGGTTCTTGCTGTTGGCCGTTTCTTGGTCTGCTTTATGTTTTTCTAGGGAAAATTTTGGGAACTTCAGGTGAGAAGGGTTCGATATATCGTATAGCATTTAGGAAATTGAAATTTATTCTATGTTCGTTTAGTGTTTTAGTCGTGTTGGTCTACTTTTGTTGTATTTAATTCGAAGTAAGAGGAGACAAAGAAGGGATTATTAATGTGAGGGCTGGAGAGAAGGGACTGGATAATGGAGAAAAATTGAAAGAAATTTTATTTTCTTGTCGTGGGTCTTGAATGGATGTAGTTTATGGACTGATATTCTTGATATATGCATGAAGCTACGGGGAAAAATCTGTGTAGCAATGTTTCTTCTCCTGTTTTTGTATGTATTCAAAACCTCGCTTAGGGTTTTGTTTGGGAGCTCTGTTGAAGATTTTATTTTTGACGTCCATATAGATTATCTTTGTGAATATTCTCAAATTTAGTATGAAATACGTTGATTATTTTTTTGAATTTATATAAACAGTCACTTCTGCTAATTTATCTTTAATAAGATGCCTCGACCATTGTTCTTCTTTTCAGCAACTAAATTTTGAAGAGTTTGGATAATCATTTGTTGTTGATGTCTTAAAATCGTTTTCCCTTATTTCTTGTTTTTCAGCTGCGATTACCGGTTTAGCTTACCATCTTTGCCTCCTTCCTTCTTGTTTGCTCTATTTTGTGGTGTTTACTGATTTCTAGAGTTTTTTACTTCATAAATCATACCATTTGAATAAACTATACTATGAGGTGCCTAGTGGTCAATAAGGGTCAATGTAGTGAAGGGCTTAGAAGGGAGTGGCTTTAAGCTATGGTGGCCACAGGGCAAACTGCTAGTTTTCGTATACAAGATATCCATCCTAGTCATTATGGACACATTTGCCCAATTGATGACACGTATGAAGGAATTAATGTTTGGTCTCCTACCTGGATTTAATATTTTGACAATCAATGCAGTAGTGTCGAGTAGTTAATAACCATTTGATTTTTTATTTTTGATAATTGAGATTGTTTTCTAACAATTTTTTTTATGAGGGTCTTATTCTCTCCCAAGGTAACATTTGAATACTTAGGCGGATTACAAAGACAAAAACAAGTTTTTAATAACTATTATTTTCTTTTTCAAAACTTGGCACGGATGTTATAAAGTAGGCGACATGGGAATAGTATGGGCTTAAATTTCAGAAACTAAAACTAAATGGTTATCATACAAAGGCCTTGGATTTTATTTTATTATATCTTTTACTTTTTAAATAGAATAAAAAATTGTTAAAGCAACATGCATTGTTTGCTTCTGAAATGTTTCTGTCTAGATGCTTATTCTTTTGCTTTTATAAATTAGTTAAAATCCCTCTTTGTTTGTGAATGGATTGGTTTTAGGGTCCCATTTTTTTACGCCTTCATTACTTGAAATTATAAAATGATCGTCTCGTGTTAACATTTCGATGACCTTAACCAAAGTATTTACTGCCATAAGATACTTAATCTTTTGCTTGGCTGTTAATTAATCTCTACATTTCTACGACCTTACTTGAACAAGATTTGTTATATAGGTTGTACAACTGCATCCTCGAGTTCTAATATAACTCTACATTTCTCTTTTTGTTTTCATTTTCATTGTGATTGGTTGACCCGTTTGTTCCTTTTTTTCCTGCTTCAAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGGTACTACCCTGAATTGCATGTTCAATTTTGGCACACAACTGCATCTTTTTTATTATTATTAATATTAATATTATTTAAAAAATTTAATGGGAATACATAAACAAATATATTTATAACGCTTACTTCCAACAGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCGGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGTAAGAACCACCAGACCAATAATTTATATATAGTTTTTCTCCAGCATAACATGCTCGACATCAATGCCATACTCTATTCTTGCACATGCAATTAACTGCATTTAAGTACGATAAATTTAAACATGTTCAATGGTGGGATTCTATTTATTCATCAGTTTAATGTCTGTTCCTACGTTCTATTTTTTTTGGCTAGGCGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGGTTTATATTCCACGTATGTATGCTACTATATAGGTTTTTTTAACTTGATCTTTTGTTTTATGTTTCTGATACCATGTTGTTTCCTCGTTCAGGAGGATGCAAAGAAATTCGACAGACATGCAAAGAACAAATATTCAGTGTGATCTGTACGGATGGTAGCGCGCGTAGCGTGGGAGGAGGGTACTTGTCGTATTCGTGCAAAGCATGCTGCTGCATCTCAGCATGGAAGGTTGAGCTGTGGCTGCTACTTCCTTTAGTTTCAACCCCCCTCCCCAAAAAACAAACGCACCACTCAGAGAAAAAAGGAAATTTTATTCGGTAAACAATGTTTCTGTGCGATTAGGAATTTGTGGAAATCGCCATTGCTCATAACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTTTAGCAATGAGATGAAATGGATGCTCTTCTATAATCAAATGATATTAGCTTGATCTGAGTTTATGT GTCCAAAATCCTACGGAAGAAAATCAAAATCCTACGGAAGGCCGACTCAAACTCCTAACAGAAAATCCGAGGGCGGTGCCATTCTTCGGTTCCTTCCATTGATTCGATTCTTCAGATACGCTCAATTCCACAAGTAGTGAAAGGAAAATGGTAGTCGAAGAGACGATCAAAGCTACATCCACGGAAGATCTTTCTAATACCATTGCAAATCAAAACCCTAGAGGACGAGGCGGTGATGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGAGACGACGACCTTGACTCGTCCAATTTGTCGGCGGCGATAGTGCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCTAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCGGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGGTTTATATTCCACGAGGATGCAAAGAAATTCGACAGACATGCAAAGAACAAATATTCAGTGTGATCTGTACGGATGGTAGCGCGCGTAGCGTGGGAGGAGGGTACTTGTCGTATTCGTGCAAAGCATGCTGCTGCATCTCAGCATGGAAGGTTGAGCTGTGGCTGCTACTTCCTTTAGTTTCAACCCCCCTCCCCAAAAAACAAACGCACCACTCAGAGAAAAAAGGAAATTTTATTCGGTAAACAATGTTTCTGTGCGATTAGGAATTTGTGGAAATCGCCATTGCTCATAACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTTTAGCAATGAGATGAAATGGATGCTCTTCTATAATCAAATGATATTAGCTTGATCTGAGTTTATGT ATGGTAGTCGAAGAGACGATCAAAGCTACATCCACGGAAGATCTTTCTAATACCATTGCAAATCAAAACCCTAGAGGACGAGGCGGTGATGAAGATGAGGAACTTGAGGAAGGAGAGATCGTCGGAGACGACGACCTTGACTCGTCCAATTTGTCGGCGGCGATAGTGCATCAGCCTCACCCTCTTGAGCACTCTTGGACCTTTTGGTTCGATAACCCATCCGCCAAGTCTAAGCAAGCCACCTGGGGTGCGTCTATCCGACCGATCTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGCAAATTGGCGTTGAGGGCAGATTTGTACTGCTTCAAACATAAAATTGAGCCTAAATGGGAAGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTAAACTTTTCAAGGGGCAAATCTGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGTGGTGATGAAATTTGTGGAGCGGTTGTTAATGTTAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCCAATGAAGCTGCGCAGGCGAGCATTGGGAAACAGTGGAAGGAGTTTCTTGATTACAATGACAGCATTGGGTTTATATTCCACGAGGATGCAAAGAAATTCGACAGACATGCAAAGAACAAATATTCAGTGTGA MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV
BLAST of ClCG03G007240 vs. Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=1 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 3.3e-92 Identity = 162/238 (68.07%), Postives = 190/238 (79.83%), Query Frame = 1
BLAST of ClCG03G007240 vs. Swiss-Prot
Match: IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica GN=Os01g0970400 PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 8.3e-88 Identity = 152/211 (72.04%), Postives = 171/211 (81.04%), Query Frame = 1
BLAST of ClCG03G007240 vs. Swiss-Prot
Match: IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.9e-85 Identity = 149/223 (66.82%), Postives = 173/223 (77.58%), Query Frame = 1
BLAST of ClCG03G007240 vs. Swiss-Prot
Match: IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum PE=1 SV=3) HSP 1 Score: 308.5 bits (789), Expect = 6.1e-83 Identity = 141/203 (69.46%), Postives = 167/203 (82.27%), Query Frame = 1
BLAST of ClCG03G007240 vs. Swiss-Prot
Match: IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana GN=EIF4E2 PE=1 SV=2) HSP 1 Score: 275.0 bits (702), Expect = 7.5e-73 Identity = 120/188 (63.83%), Postives = 147/188 (78.19%), Query Frame = 1
BLAST of ClCG03G007240 vs. TrEMBL
Match: C7SG33_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus GN=eIF4E PE=2 SV=1) HSP 1 Score: 497.7 bits (1280), Expect = 8.0e-138 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of ClCG03G007240 vs. TrEMBL
Match: C7SG34_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus GN=eIF4E PE=2 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 3.9e-137 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1
BLAST of ClCG03G007240 vs. TrEMBL
Match: G1FG56_9ROSI (Eukaryotic translation initiation factor 4E OS=Citrullus mucosospermus GN=eIF4e PE=2 SV=1) HSP 1 Score: 495.0 bits (1273), Expect = 5.2e-137 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1
BLAST of ClCG03G007240 vs. TrEMBL
Match: B0F6T5_CUCSA (Eukaryotic initiation factor 4E OS=Cucumis sativus GN=eIF4E PE=3 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 4.5e-133 Identity = 224/235 (95.32%), Postives = 233/235 (99.15%), Query Frame = 1
BLAST of ClCG03G007240 vs. TrEMBL
Match: Q00LS8_CUCME (Eukaryotic transcription initiation factor 4E OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 7.7e-133 Identity = 223/235 (94.89%), Postives = 232/235 (98.72%), Query Frame = 1
BLAST of ClCG03G007240 vs. TAIR10
Match: AT4G18040.1 (AT4G18040.1 eukaryotic translation initiation factor 4E) HSP 1 Score: 339.3 bits (869), Expect = 1.8e-93 Identity = 162/238 (68.07%), Postives = 190/238 (79.83%), Query Frame = 1
BLAST of ClCG03G007240 vs. TAIR10
Match: AT1G29590.2 (AT1G29590.2 Eukaryotic initiation factor 4E protein) HSP 1 Score: 274.6 bits (701), Expect = 5.5e-74 Identity = 119/188 (63.30%), Postives = 147/188 (78.19%), Query Frame = 1
BLAST of ClCG03G007240 vs. TAIR10
Match: AT1G29550.1 (AT1G29550.1 Eukaryotic initiation factor 4E protein) HSP 1 Score: 272.7 bits (696), Expect = 2.1e-73 Identity = 119/188 (63.30%), Postives = 146/188 (77.66%), Query Frame = 1
BLAST of ClCG03G007240 vs. TAIR10
Match: AT5G35620.1 (AT5G35620.1 Eukaryotic initiation factor 4E protein) HSP 1 Score: 198.7 bits (504), Expect = 3.9e-51 Identity = 96/172 (55.81%), Postives = 117/172 (68.02%), Query Frame = 1
BLAST of ClCG03G007240 vs. TAIR10
Match: AT5G18110.1 (AT5G18110.1 novel cap-binding protein) HSP 1 Score: 118.2 bits (295), Expect = 6.6e-27 Identity = 59/165 (35.76%), Postives = 86/165 (52.12%), Query Frame = 1
BLAST of ClCG03G007240 vs. NCBI nr
Match: gi|224999213|gb|ACN51299.1| (eukaryotic translation inititation factor 4E [Citrullus lanatus]) HSP 1 Score: 497.7 bits (1280), Expect = 1.1e-137 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 1
BLAST of ClCG03G007240 vs. NCBI nr
Match: gi|224483518|gb|ACN51300.1| (eukaryotic translation inititation factor 4E [Citrullus lanatus]) HSP 1 Score: 495.4 bits (1274), Expect = 5.7e-137 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1
BLAST of ClCG03G007240 vs. NCBI nr
Match: gi|341867156|gb|AEK98516.1| (eukaryotic translation initiation factor 4E [Citrullus mucosospermus]) HSP 1 Score: 495.0 bits (1273), Expect = 7.4e-137 Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 1
BLAST of ClCG03G007240 vs. NCBI nr
Match: gi|449459326|ref|XP_004147397.1| (PREDICTED: eukaryotic translation initiation factor 4E-1 [Cucumis sativus]) HSP 1 Score: 481.9 bits (1239), Expect = 6.5e-133 Identity = 224/235 (95.32%), Postives = 233/235 (99.15%), Query Frame = 1
BLAST of ClCG03G007240 vs. NCBI nr
Match: gi|661902932|ref|NP_001284409.1| (eukaryotic translation initiation factor 4E [Cucumis melo]) HSP 1 Score: 481.1 bits (1237), Expect = 1.1e-132 Identity = 223/235 (94.89%), Postives = 232/235 (98.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |