Carg14556 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg14556
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Eukaryotic translation initiation factor 4E
Location	Cucurbita_argyrosperma_scaffold_181 : 266220 .. 269120 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGGTGCCGTTCTTCTTCCCTTCGGTTTCCTTCCATTAATTCCATTTCTCTGATTCGCCCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGGTAGAGTTTCTTTTGATGTGTTTTATCTCTTGCTTTCGGTTCTTATGTTTTTGGTGTTTCTTGGTTCGTTTTTTTTTTTTTCCCCTTTTTGTGGGAAATTTTAGGAGACTTCAGGTGAAAACCGTTCGATATAGCTTTAAGAAATTGAAATTTCTTCCATGTTTTGTAGTGGTTTAGTTACCTTGGTCTTGTTCTATTTAATTCGAAGAGCACTGAGACAAAGAAGGGATTGGGATTGCGAGGGCTGCAGAGAAGGGGCTTATTGATGGAGAAAATGTGAAAGAAAAATATTCTTTTCGCGTGTAATGAAGGAATCGAGTTTATGGGCTAATGTTCTTGATATTTGCTTGCAATTAAAGGTCTAAAATCTATGCTGCGATGTTTCTGCTATCTGCGTTGTCCTGTTCTTGTGTGTACTTCCAAACCCTCTTAGGGTTTTATTTGGGAGTTCTGTTGAACACTTCACTTTTTACGTTCATATACATAGTCTTTGTGAATTTTCTCAGATTTAGTCTGAAATACTTTGACTATATCCTGGTGTGTAGACCTAAGAATCAGACAGGAGTAAGACATACTTGCAATTTTACCAACTATGGTGTTAGAAAATTGCTTTGAATTTATATAAACAGCCGCTTCTGCCAATTCATCTGGACTTTATTATCCTTCGGCGATTTATTTCAGCAACTTAAATTTCGATGAGTTTGGATGTTCATTTGATGTAGCGATTTTCATGTTGTTTTCCTTTCTTGTTTTGCAGCTATGGTTACTTTTTTAGCTTACCATCTTTGCCTCCTTCCTTCTTGTTCGTTCTATTTTGTGGTGTTCACTGATTACCAGAGTTTTTGACATCGTAAATTATACTTTTTGAATAAAGTACCATGGGTTAAATTAGGACCCATGTTATGAGTGATCACTCACTTGGATTCGATGTCCTACTATTGTCTCGTGAGAATAGTCGAAGATGCATATAAGCCGACCCGTAAACTTAGTGATTTCCATAAAAAGGAGAATCTTTTTAACATAATAGAAAGTTGGTGAAGCATTTGCGTACGTGGTATGCTTCTGAAACGTTCCTGTCTAGATGCTTATTCCGTTTGCTTTTATATTGTTGACAATCCTTCTTTTGTTTGTGAATGTAATGTTTAGTTTCCGGGTCCGTTCGTTACTTATAATTATAAATGGTTACTTCACTAAGACATTGACAAAAGTTTCTACTTGCAAGTACTACATCTTTTGTATTTAATAGGTTGTTAACTTATGTCTCTATTGTCTTTTTGTTTTCACTTTCCCTCAGATTGGTTGACCCATTTGTTCGTGTTTGTTTCCCTCATTTTTTTAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGGTACTATGAACTGCACATACAATTTGACACGAGCAAAATATTTGAGACACTAGTCTTTTATCTCTAACAATCAGTTACTTCCATCCAGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGTAATAGCCACTAAACCAATAGTTACTAGATTTTCATCAATACAATACTCTGTTCTTGCACACGCAATGAACTTCATTTGTGAACAATAATCTTACTCATGTTCAATGGTGGAAATTGTTTGCTGTTCGGATTCTGTTCGTTCATCAGTTAATGTCTCTGCATCCCGTTCTCTTTTTTCTGGTTAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGTATGTACGCTGCCACATAGGTTTCATTTGCATTTCTTGTGGTTAGAACTCGAATCTTTTGTTTCGTGTTTCTGATATCATGTTGTTTCTTGTTCAGGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGATCAGTATGGCAGGAGGATACTCGTCCGTCCTAAATGTGCAAAGCATGCTCTGCATCAGCATGTTAATCTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCTTGAGATATGGGACAGGATGATGCTCCTCTACAATCAAATGATGTTTTAGCTTGATCCGAATATTAAAATTTGATCTGGGTGATAAATTATACGAAATAACATAACATTCAAGTCGATCTTTAAACTAAAATCTCTT

mRNA sequence

GCGGTGCCGTTCTTCTTCCCTTCGGTTTCCTTCCATTAATTCCATTTCTCTGATTCGCCCAATCCCACAACGAATTAGTGAAAGAAAAATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGATCAGTATGGCAGGAGGATACTCGTCCGTCCTAAATGTGCAAAGCATGCTCTGCATCAGCATGTTAATCTTAGTTTGAGTTGTGGCTTCTTCTTTCTTTAGTTTCAACCCCTCCCCCTCAAGCAAACACACCACACACCACCTAGTGTTGAACAATGTTTTGTGCGATTTGATTTGGAATTTTTGTGTGGAAATCGCCATTGCTGCACATTACAAGCACCTGAATCTCAGATTCTTGTTCTGTACTTGACAGTTCTAGCTTGAGATATGGGACAGGATGATGCTCCTCTACAATCAAATGATGTTTTAGCTTGATCCGAATATTAAAATTTGATCTGGGTGATAAATTATACGAAATAACATAACATTCAAGTCGATCTTTAAACTAAAATCTCTT

Coding sequence (CDS)

ATGGTAGTCGAAGAGACGATCAAGGCTCCATCGGCGGAAGATCTCTCCAATTCCATTGGAAATCAAAACCCTAGGGGACGAGGCGCTGAGGAAGATGAGGAGCTTGAGGAAGGAGAGATCGTCGGCGCCGACGACCTCGACGCGTCCAATTTATCGGCGGCGATAGTGCACCAGCCTCACCCTCTGGAGCACTCTTGGACCTTCTGGTTCGATAACCCTTCTGCCAAATCTAAACAGGCCACATGGGGTGCGTCTATCCGACCGATTTATACCTTCTCTACTGTTGAGGAGTTTTGGAGTGTTTACAACAATATTCATCATCCAAGTAAATTGGCATTGAGGGCAGATTTGTACTGCTTTAAACATCACATTGAGCCAAAATGGGAGGATCCTGTTTGTGCGAATGGAGGGAAATGGACTGTTAACTTTTCAAGGGGTAAATCCGATAATGGCTGGCTGTACACGCTGCTTGCTATGATCGGAGAACAGTTTGATTGCGGCGACGAAATTTGTGGAGCAGTTGTTAATGTCAGATCTGGGCAGGATAAAATATCGATTTGGACAAAGAATGCTTCTAATGAAGCTGCGCAGGCGAGCATTGGAAAGCAGTGGAAGGAGTTCCTTGATTACAATGACAGCATTGGCTTTATATTCCATGACGATGCGAAGAAACTTGACAGACATGCGAAGAGCCGGTATACCGTTTGA

Protein sequence

MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV

Homology

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BLAST of Carg14556 vs. NCBI nr
Match: XP_022994876.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita maxima] >XP_023541524.1 eukaryotic translation initiation factor 4E-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497.7 bits (1280), Expect = 2.2e-137
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH
Sbjct: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 235

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BLAST of Carg14556 vs. NCBI nr
Match: XP_022954765.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata])

HSP 1 Score: 496.1 bits (1276), Expect = 6.5e-137
Identity = 234/235 (99.57%), Postives = 234/235 (99.57%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIK PSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH
Sbjct: 1   MVVEETIKVPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 235

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BLAST of Carg14556 vs. NCBI nr
Match: XP_022927466.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata])

HSP 1 Score: 475.3 bits (1222), Expect = 1.2e-130
Identity = 224/235 (95.32%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSNSI NQNPRGRG EEDE+LEEGEIVG DDLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDDDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEH WTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKK DRHAK+RYTV
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTV 235

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BLAST of Carg14556 vs. NCBI nr
Match: ACN51299.1 (eukaryotic translation inititation factor 4E [Citrullus lanatus] >ACN51301.1 eukaryotic translation inititation factor 4E [Citrullus lanatus] >AJA90795.1 eukaryotic translation inititation factor 4E [Citrullus lanatus])

HSP 1 Score: 473.0 bits (1216), Expect = 5.9e-130
Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSN+I NQNPRGRG +EDEELEEGEIVG DDLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFH+DAKK DRHAK++Y+V
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV 235

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BLAST of Carg14556 vs. NCBI nr
Match: XP_023519487.1 (eukaryotic translation initiation factor 4E-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.6 bits (1215), Expect = 7.6e-130
Identity = 223/235 (94.89%), Postives = 226/235 (96.17%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSNSI NQNPRGRG EEDE+LEEGEIVG  DLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSMEDLSNSIANQNPRGRGNEEDEDLEEGEIVGDHDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEH WTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHPWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKK DRHAK+RYTV
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKFDRHAKNRYTV 235

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BLAST of Carg14556 vs. TAIR10
Match: AT4G18040.1 (eukaryotic translation initiation factor 4E)

HSP 1 Score: 339.0 bits (868), Expect = 2.4e-93
Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLS-NSIGNQNPRGRGAEEDEELEEGEIVGAD-DLDASNLSAAIVHQ 60
           M VE+T K+   E+   NSI  +NP  R  EE ++ EEGEI G + D +    S + V +
Sbjct: 1   MAVEDTPKSVVTEEAKPNSI--ENPIDRYHEEGDDAEEGEIAGGEGDGNVDESSKSGVPE 60

Query: 61  PHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLY 120
            HPLEHSWTFWFDNP+ KSKQ +WG+S+RP++TFSTVEEFWS+YNN+ HPSKLA  AD Y
Sbjct: 61  SHPLEHSWTFWFDNPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFY 120

Query: 121 CFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVR 180
           CFKH IEPKWEDP+CANGGKWT+ F + KSD  WLYTLLA+IGEQFD GDEICGAVVN+R
Sbjct: 121 CFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIR 180

Query: 181 SGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYT 235
             Q++ISIWTKNASNEAAQ SIGKQWKEFLDYN+SIGFI H+DAKKLDR+AK+ YT
Sbjct: 181 GKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNSIGFIIHEDAKKLDRNAKNAYT 234

[Close]

BLAST of Carg14556 vs. TAIR10
Match: AT1G29590.2 (Eukaryotic initiation factor 4E protein)

HSP 1 Score: 281.2 bits (718), Expect = 5.9e-76
Identity = 121/188 (64.36%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 48  ASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHH 107
           AS  S  ++ + H  ++SWTFWFDNPS+KS Q  WG+S+R +YTF+T+EEFWS+YNNIH 
Sbjct: 53  ASKKSTTVIQKSHCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFATIEEFWSLYNNIHP 112

Query: 108 PSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCG 167
           P+K    +DLYCFK  IEPKWEDP+CANGGKWT+ F R   ++ WL TLLA++GEQFD G
Sbjct: 113 PTKWVSGSDLYCFKDKIEPKWEDPICANGGKWTMFFPRATLESNWLNTLLALVGEQFDQG 172

Query: 168 DEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDR 227
           DEICGAV+N R+  D+IS+WTK A+NE AQ SIGKQWKE L YND+IGFI H+DAK LDR
Sbjct: 173 DEICGAVLNFRTRGDRISLWTKKAANEEAQLSIGKQWKELLGYNDTIGFIVHEDAKTLDR 232

Query: 228 HAKSRYTV 236
            AK RYT+
Sbjct: 233 DAKRRYTI 240

[Close]

BLAST of Carg14556 vs. TAIR10
Match: AT1G29550.1 (Eukaryotic initiation factor 4E protein)

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-75
Identity = 121/188 (64.36%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 48  ASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHH 107
           AS  S  ++ + H  ++SWTFWFDNPS+KS Q  WG+S+R +YTF T+EEFWS+YNNIH 
Sbjct: 53  ASKKSTTVIQKSHCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFGTIEEFWSLYNNIHP 112

Query: 108 PSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCG 167
           P+K    ADLYCFK  IEPKWEDP+CANGGKW++ F +   +  WL TLLA++GEQFD G
Sbjct: 113 PTKWVSGADLYCFKDKIEPKWEDPICANGGKWSMMFPKATLECNWLNTLLALVGEQFDQG 172

Query: 168 DEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDR 227
           DEICGAV+N R+  D+IS+WTKNA+NE AQ SIGKQWKE L YN++IGFI H+DAK LDR
Sbjct: 173 DEICGAVLNFRARGDRISLWTKNAANEEAQLSIGKQWKELLGYNETIGFIVHEDAKTLDR 232

Query: 228 HAKSRYTV 236
            AK RYTV
Sbjct: 233 DAKRRYTV 240

[Close]

BLAST of Carg14556 vs. TAIR10
Match: AT5G35620.1 (Eukaryotic initiation factor 4E protein)

HSP 1 Score: 205.7 bits (522), Expect = 3.2e-53
Identity = 101/183 (55.19%), Postives = 124/183 (67.76%), Query Frame = 0


Query: 58  QPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADL 117
           QPH LE  W+FWFDN S K   A WGAS+R  YTF TVE+FW ++  I   SKL   A++
Sbjct: 24  QPHKLERKWSFWFDNQSKKG--AAWGASLRKAYTFDTVEDFWGLHETIFQTSKLTANAEI 83

Query: 118 YCFKHHIEPKWEDPVCANGGKWT--VNFSRGKS-DNGWLYTLLAMIGEQFDCGDEICGAV 177
           + FK  +EPKWEDP CANGGKWT  V  +R ++ D GWL TL+A+IGEQFD  DEICG V
Sbjct: 84  HLFKAGVEPKWEDPECANGGKWTWVVTANRKEALDKGWLETLMALIGEQFDEADEICGVV 143

Query: 178 VNVR--SGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSR 236
            +VR  S QDK+S+WT+  SNEA    IGK+WKE LD  D I F  HDD++      +SR
Sbjct: 144 ASVRPQSKQDKLSLWTRTKSNEAVLMGIGKKWKEILDVTDKITFNNHDDSR------RSR 198

[Close]

BLAST of Carg14556 vs. TAIR10
Match: AT5G18110.1 (novel cap-binding protein)

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-28
Identity = 59/165 (35.76%), Postives = 88/165 (53.33%), Query Frame = 0


Query: 44  DDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYN 103
           D +     S  +    HPL + ++ W+   +   +  ++  +I+ +  FSTVE FW+ Y 
Sbjct: 27  DSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQSYEDNIKKMVEFSTVEGFWACYC 86

Query: 104 NIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQ 163
           ++   S L    DL+ FK  I P WED    NGGKW + FS+  S   W   LLA++G+Q
Sbjct: 87  HLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQ 146

Query: 164 FDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFL 209
            D  D ICGAV++VR  +D IS+W +NAS+  A   +    K  L
Sbjct: 147 LDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHL 191

[Close]

BLAST of Carg14556 vs. Swiss-Prot
Match: sp|O23252|IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana OX=3702 GN=EIF4E1 PE=1 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 4.3e-92
Identity = 161/236 (68.22%), Postives = 190/236 (80.51%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLS-NSIGNQNPRGRGAEEDEELEEGEIVGAD-DLDASNLSAAIVHQ 60
           M VE+T K+   E+   NSI  +NP  R  EE ++ EEGEI G + D +    S + V +
Sbjct: 1   MAVEDTPKSVVTEEAKPNSI--ENPIDRYHEEGDDAEEGEIAGGEGDGNVDESSKSGVPE 60

Query: 61  PHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLY 120
            HPLEHSWTFWFDNP+ KSKQ +WG+S+RP++TFSTVEEFWS+YNN+ HPSKLA  AD Y
Sbjct: 61  SHPLEHSWTFWFDNPAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFY 120

Query: 121 CFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVR 180
           CFKH IEPKWEDP+CANGGKWT+ F + KSD  WLYTLLA+IGEQFD GDEICGAVVN+R
Sbjct: 121 CFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIR 180

Query: 181 SGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYT 235
             Q++ISIWTKNASNEAAQ SIGKQWKEFLDYN+SIGFI H+DAKKLDR+AK+ YT
Sbjct: 181 GKQERISIWTKNASNEAAQVSIGKQWKEFLDYNNSIGFIIHEDAKKLDRNAKNAYT 234

[Close]

BLAST of Carg14556 vs. Swiss-Prot
Match: sp|P48599|IF4E1_ORYSJ (Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0970400 PE=2 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 8.4e-88
Identity = 150/207 (72.46%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 29  AEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRP 88
           A++ +E EEGEI  ADD        A    PHPLEH+WTFWFDNP  KSKQATWG+SIRP
Sbjct: 23  ADDADEREEGEI--ADDDSGHAPPQANPAAPHPLEHAWTFWFDNPQGKSKQATWGSSIRP 82

Query: 89  IYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKS 148
           I+TFSTVE+FWS+YNNIHHPSKL + AD +CFK+ IEPKWEDP+CANGGKWT +  RGKS
Sbjct: 83  IHTFSTVEDFWSLYNNIHHPSKLVVGADFHCFKNKIEPKWEDPICANGGKWTFSCGRGKS 142

Query: 149 DNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFL 208
           D  WL+TLLAMIGEQFD GDEICGAVV+VR  Q++I+IWTKNA+NEAAQ SIGKQWKEFL
Sbjct: 143 DTMWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNAANEAAQISIGKQWKEFL 202

Query: 209 DYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           DY DSIGFI HDDAKK+D+  K+RYTV
Sbjct: 203 DYKDSIGFIVHDDAKKMDKGLKNRYTV 227

[Close]

BLAST of Carg14556 vs. Swiss-Prot
Match: sp|O81481|IF4E1_MAIZE (Eukaryotic translation initiation factor 4E-1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 7.1e-87
Identity = 152/224 (67.86%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 12  AEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFD 71
           AE+      +   RGR A ED++ EEGEI    DL  +    A     HPLEHSWTFWFD
Sbjct: 2   AEETDTRPASAGSRGRPAPEDDDREEGEIT---DLACAPSPPA----THPLEHSWTFWFD 61

Query: 72  NPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDP 131
           NP +KSKQA WG+SIRPI+TFSTVEEFW +YNNI+HPSKL + AD +CFK+ IEPKWEDP
Sbjct: 62  NPQSKSKQAAWGSSIRPIHTFSTVEEFWGLYNNINHPSKLIVGADFHCFKNKIEPKWEDP 121

Query: 132 VCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNA 191
           +CANGGKWT++  RGKSD  WL+TLLAMIGEQFD GDEICGAVV+VR  Q++I+IWTKNA
Sbjct: 122 ICANGGKWTISCGRGKSDTFWLHTLLAMIGEQFDYGDEICGAVVSVRGKQERIAIWTKNA 181

Query: 192 SNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           +NEAAQ SIGKQWKE LDY DSIGFI HDDAKK+D+  K RYTV
Sbjct: 182 ANEAAQVSIGKQWKELLDYKDSIGFIVHDDAKKMDKGLKERYTV 218

[Close]

BLAST of Carg14556 vs. Swiss-Prot
Match: sp|P29557|IF4E1_WHEAT (Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum OX=4565 PE=1 SV=3)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-83
Identity = 144/212 (67.92%), Postives = 172/212 (81.13%), Query Frame = 0


Query: 24  PRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWG 83
           P   GA   EE EEGEI  ADD D S+ +AA     HPLE++WTFWFDNP  KS+Q  WG
Sbjct: 9   PASAGA---EEREEGEI--ADDGDGSSAAAAGRITAHPLENAWTFWFDNPQGKSRQVAWG 68

Query: 84  ASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNF 143
           ++I PI+TFSTVE+FW +YNNIH+PSKL + AD +CFK+ IEPKWEDP+CANGGKWT++ 
Sbjct: 69  STIHPIHTFSTVEDFWGLYNNIHNPSKLNVGADFHCFKNKIEPKWEDPICANGGKWTISC 128

Query: 144 SRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQ 203
            RGKSD  WL+TLLAMIGEQFD GDEICGAVV+VR  Q++++IWTKNA+NEAAQ SIGKQ
Sbjct: 129 GRGKSDTFWLHTLLAMIGEQFDFGDEICGAVVSVRQKQERVAIWTKNAANEAAQISIGKQ 188

Query: 204 WKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           WKEFLDY DSIGFI H+DAK+ D+  K+RYTV
Sbjct: 189 WKEFLDYKDSIGFIVHEDAKRSDKGPKNRYTV 215

[Close]

BLAST of Carg14556 vs. Swiss-Prot
Match: sp|Q9C7P2|IF4E2_ARATH (Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana OX=3702 GN=EIF4E2 PE=1 SV=2)

HSP 1 Score: 281.6 bits (719), Expect = 8.2e-75
Identity = 122/188 (64.89%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 48  ASNLSAAIVHQPHPLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHH 107
           AS  S  ++ + H  ++SWTFWFDNPS+KS Q  WG+S+R +YTF+T+EEFWS+YNNIH 
Sbjct: 53  ASKKSTTVIQKSHCFQNSWTFWFDNPSSKSNQVIWGSSLRSLYTFATIEEFWSLYNNIHP 112

Query: 108 PSKLALRADLYCFKHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCG 167
           P+K    +DLYCFK  IEPKWEDP+CANGGKWT+ F R   ++ WL TLLA++GEQFD G
Sbjct: 113 PTKWVSGSDLYCFKDKIEPKWEDPICANGGKWTMFFPRATLESNWLNTLLALVGEQFDQG 172

Query: 168 DEICGAVVNVRSGQDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDR 227
           DEICGAV+N R+  D+IS+WTK A+NE AQ SIGKQWKE L YND+IGFI H+DAK LDR
Sbjct: 173 DEICGAVLNFRTRGDRISLWTKKAANEEAQLSIGKQWKELLGYNDTIGFIVHEDAKTLDR 232

Query: 228 HAKSRYTV 236
            AK RYTV
Sbjct: 233 DAKRRYTV 240

[Close]

BLAST of Carg14556 vs. TrEMBL
Match: tr|C7SG33|C7SG33_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus OX=3654 GN=eIF4E PE=2 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 3.9e-130
Identity = 221/235 (94.04%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSN+I NQNPRGRG +EDEELEEGEIVG DDLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFH+DAKK DRHAK++Y+V
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV 235

[Close]

BLAST of Carg14556 vs. TrEMBL
Match: tr|C7SG34|C7SG34_CITLA (Eukaryotic translation inititation factor 4E OS=Citrullus lanatus OX=3654 GN=eIF4E PE=2 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.9e-129
Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSN+I NQNPRGRG +EDEELEEGEIVG DDLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQA WGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQAPWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFH+DAKK DRHAK++Y+V
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV 235

[Close]

BLAST of Carg14556 vs. TrEMBL
Match: tr|G1FG56|G1FG56_9ROSI (Eukaryotic translation initiation factor 4E OS=Citrullus mucosospermus OX=519315 GN=eIF4e PE=2 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 2.5e-129
Identity = 220/235 (93.62%), Postives = 227/235 (96.60%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVEETIKA S EDLSN+I NQNPRGRG +EDEELEEGEIVG DDLD+SNLSAAIVHQPH
Sbjct: 1   MVVEETIKATSTEDLSNTIANQNPRGRGGDEDEELEEGEIVGDDDLDSSNLSAAIVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWF NPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFGNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFH+DAKK DRHAK++Y+V
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHEDAKKFDRHAKNKYSV 235

[Close]

BLAST of Carg14556 vs. TrEMBL
Match: tr|B0F6T5|B0F6T5_CUCSA (Eukaryotic initiation factor 4E OS=Cucumis sativus OX=3659 GN=eIF4E PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 3.3e-129
Identity = 219/235 (93.19%), Postives = 228/235 (97.02%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVE+TIKA SAEDLSNSI NQNPRGRG EEDEELEEGEIVG DDLD+SNL+AA+VHQPH
Sbjct: 1   MVVEDTIKATSAEDLSNSIANQNPRGRGGEEDEELEEGEIVGDDDLDSSNLTAALVHQPH 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGAS+RPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASMRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCA+GGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCASGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRYTV 236
           QDKISIWTKNASNEAAQASIGKQWKEFLDYN+SIGFIFHDDAKK DRHAK++Y V
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNESIGFIFHDDAKKFDRHAKNKYMV 235

[Close]

BLAST of Carg14556 vs. TrEMBL
Match: tr|A7KWF8|A7KWF8_9ROSI (Translation initiation factor OS=Cucumis zeyherii OX=61887 GN=eIF4E PE=2 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 2.1e-128
Identity = 218/233 (93.56%), Postives = 226/233 (97.00%), Query Frame = 0


Query: 1   MVVEETIKAPSAEDLSNSIGNQNPRGRGAEEDEELEEGEIVGADDLDASNLSAAIVHQPH 60
           MVVE+TIKA SAEDLSNSI NQNPRGRG EEDEELEEGEIVG DDLD+SNLSAA+VHQP+
Sbjct: 1   MVVEDTIKATSAEDLSNSIANQNPRGRGGEEDEELEEGEIVGDDDLDSSNLSAALVHQPN 60

Query: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLALRADLYCF 120
           PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLA+RADLYCF
Sbjct: 61  PLEHSWTFWFDNPSAKSKQATWGASIRPIYTFSTVEEFWSVYNNIHHPSKLAMRADLYCF 120

Query: 121 KHHIEPKWEDPVCANGGKWTVNFSRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180
           KH IEPKWEDPVCANGGKWTVNF RGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG
Sbjct: 121 KHKIEPKWEDPVCANGGKWTVNFPRGKSDNGWLYTLLAMIGEQFDCGDEICGAVVNVRSG 180

Query: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNDSIGFIFHDDAKKLDRHAKSRY 234
           QDKISIWTKNASNEAAQASIGKQWKEFLDYN+SIGFIFHDDAKK DRHAK++Y
Sbjct: 181 QDKISIWTKNASNEAAQASIGKQWKEFLDYNESIGFIFHDDAKKFDRHAKNKY 233

The following BLAST results are available for this feature:

BLAST of Carg14556 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022994876.1	2.2e-137	100.00	eukaryotic translation initiation factor 4E-1-like [Cucurbita maxima] >XP_023541...	[more]
XP_022954765.1	6.5e-137	99.57	eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata]	[more]
XP_022927466.1	1.2e-130	95.32	eukaryotic translation initiation factor 4E-1-like [Cucurbita moschata]	[more]
ACN51299.1	5.9e-130	94.04	eukaryotic translation inititation factor 4E [Citrullus lanatus] >ACN51301.1 euk...	[more]
XP_023519487.1	7.6e-130	94.89	eukaryotic translation initiation factor 4E-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg14556 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G18040.1	2.4e-93	68.22	eukaryotic translation initiation factor 4E	[more]
AT1G29590.2	5.9e-76	64.36	Eukaryotic initiation factor 4E protein	[more]
AT1G29550.1	2.3e-75	64.36	Eukaryotic initiation factor 4E protein	[more]
AT5G35620.1	3.2e-53	55.19	Eukaryotic initiation factor 4E protein	[more]
AT5G18110.1	4.6e-28	35.76	novel cap-binding protein	[more]

BLAST of Carg14556 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23252\|IF4E1_ARATH	4.3e-92	68.22	Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|P48599\|IF4E1_ORYSJ	8.4e-88	72.46	Eukaryotic translation initiation factor 4E-1 OS=Oryza sativa subsp. japonica OX...	[more]
sp\|O81481\|IF4E1_MAIZE	7.1e-87	67.86	Eukaryotic translation initiation factor 4E-1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
sp\|P29557\|IF4E1_WHEAT	1.3e-83	67.92	Eukaryotic translation initiation factor 4E-1 OS=Triticum aestivum OX=4565 PE=1 ...	[more]
sp\|Q9C7P2\|IF4E2_ARATH	8.2e-75	64.89	Eukaryotic translation initiation factor 4E-2 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg14556 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|C7SG33\|C7SG33_CITLA	3.9e-130	94.04	Eukaryotic translation inititation factor 4E OS=Citrullus lanatus OX=3654 GN=eIF...	[more]
tr\|C7SG34\|C7SG34_CITLA	1.9e-129	93.62	Eukaryotic translation inititation factor 4E OS=Citrullus lanatus OX=3654 GN=eIF...	[more]
tr\|G1FG56\|G1FG56_9ROSI	2.5e-129	93.62	Eukaryotic translation initiation factor 4E OS=Citrullus mucosospermus OX=519315...	[more]
tr\|B0F6T5\|B0F6T5_CUCSA	3.3e-129	93.19	Eukaryotic initiation factor 4E OS=Cucumis sativus OX=3659 GN=eIF4E PE=3 SV=1	[more]
tr\|A7KWF8\|A7KWF8_9ROSI	2.1e-128	93.56	Translation initiation factor OS=Cucumis zeyherii OX=61887 GN=eIF4E PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0003743	translation initiation factor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **INTERPRO**
Term	Definition
IPR019770	TIF_eIF_4E_CS
IPR023398	TIF_eIF4e-like
IPR001040	TIF_eIF_4E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg14556-RA	Carg14556-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001040	Translation Initiation factor eIF- 4e	PFAM	PF01652	IF4E	coord: 61..213 e-value: 8.8E-55 score: 184.7
IPR001040	Translation Initiation factor eIF- 4e	PANTHER	PTHR11960	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	coord: 43..235
IPR023398	Translation Initiation factor eIF- 4e-like	GENE3D	G3DSA:3.30.760.10		coord: 58..235 e-value: 1.6E-73 score: 248.1
IPR023398	Translation Initiation factor eIF- 4e-like	SUPERFAMILY	SSF55418	eIF4e-like	coord: 56..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR11960:SF12	EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E	coord: 43..235
IPR019770	Eukaryotic translation initiation factor 4E (eIF-4E), conserved site	PROSITE	PS00813	IF4E	coord: 116..139

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg14556	Cla019623	Watermelon (97103) v1	carwmB0141
Carg14556	Csa1G464540	Cucumber (Chinese Long) v2	carcuB0162
Carg14556	MELO3C002698	Melon (DHL92) v3.5.1	carmeB0150
Carg14556	ClCG03G007240	Watermelon (Charleston Gray)	carwcgB0144
Carg14556	CSPI01G21630	Wild cucumber (PI 183967)	carcpiB0168
Carg14556	Cucsa.212630	Cucumber (Gy14) v1	carcgyB0184
Carg14556	CmaCh18G004460	Cucurbita maxima (Rimu)	carcmaB0198
Carg14556	CmaCh13G005700	Cucurbita maxima (Rimu)	carcmaB0196
Carg14556	CmoCh18G004220	Cucurbita moschata (Rifu)	carcmoB0204
Carg14556	CmoCh13G005990	Cucurbita moschata (Rifu)	carcmoB0202
Carg14556	Lsi02G008510	Bottle gourd (USVL1VR-Ls)	carlsiB135
Carg14556	Cp4.1LG09g07710	Cucurbita pepo (Zucchini)	carcpeB0211
Carg14556	Cp4.1LG20g04920	Cucurbita pepo (Zucchini)	carcpeB0215
Carg14556	CsGy1G021300	Cucumber (Gy14) v2	carcgybB0160
Carg14556	MELO3C002698.2	Melon (DHL92) v3.6.1	carmedB0153
Carg14556	CsaV3_1G032830	Cucumber (Chinese Long) v3	carcucB0169
Carg14556	Cla97C03G058500	Watermelon (97103) v2	carwmbB0156
Carg14556	Bhi08G001746	Wax gourd	carwgoB0192

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg14556	Carg19909	Silver-seed gourd	carcarB177

The following block(s) are covering this gene:


Gene	Organism	Block
Carg14556	Silver-seed gourd	carcarB174
Carg14556	Cucumber (Gy14) v2	carcgybB0164
Carg14556	Cucumber (Gy14) v1	carcgyB0180
Carg14556	Cucurbita maxima (Rimu)	carcmaB0199
Carg14556	Cucurbita moschata (Rifu)	carcmoB0205
Carg14556	Cucurbita moschata (Rifu)	carcmoB0210
Carg14556	Cucurbita pepo (Zucchini)	carcpeB0212
Carg14556	Cucurbita pepo (Zucchini)	carcpeB0214
Carg14556	Wild cucumber (PI 183967)	carcpiB0175
Carg14556	Cucumber (Chinese Long) v2	carcuB0169
Carg14556	Cucumber (Chinese Long) v3	carcucB0175
Carg14556	Bottle gourd (USVL1VR-Ls)	carlsiB133
Carg14556	Melon (DHL92) v3.5.1	carmeB0154
Carg14556	Melon (DHL92) v3.6.1	carmedB0157
Carg14556	Watermelon (Charleston Gray)	carwcgB0143
Carg14556	Watermelon (97103) v1	carwmB0143
Carg14556	Watermelon (97103) v2	carwmbB0153
Carg14556	Wax gourd	carwgoB0190