Cp4.1LG09g06590 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g06590
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG09 : 5168839 .. 5169144 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATATCATTACGCTTTCACTCAGCAATCACCGCAGCGGTGATTCTTATGACGGCCATCTGCCTGACTTCCCCTTGCCCGGCCGACGCCAAGCAGTGCGGGGACTGCATCAGGGACAGGATGGCGCTGCACTGCCCAGCCTGCGCACCGCCTCTGCGCTGCATGGCGCAGTGCCTGTGGGGCGGCGGTTCAAGGTGGAGGTGCGTTAAGCAGTGCGACGGCGGAGGTCAATGGGCGAGGCTGTCCACTTGTAAGCGTTGCATGTGGAGTTGCAAGTGCAGTTGTACCTCTTCTTCTTCTTAG

mRNA sequence

ATGGAGATATCATTACGCTTTCACTCAGCAATCACCGCAGCGGTGATTCTTATGACGGCCATCTGCCTGACTTCCCCTTGCCCGGCCGACGCCAAGCAGTGCGGGGACTGCATCAGGGACAGGATGGCGCTGCACTGCCCAGCCTGCGCACCGCCTCTGCGCTGCATGGCGCAGTGCCTGTGGGGCGGCGGTTCAAGGTGGAGGTGCGTTAAGCAGTGCGACGGCGGAGGTCAATGGGCGAGGCTGTCCACTTGTAAGCGTTGCATGTGGAGTTGCAAGTGCAGTTGTACCTCTTCTTCTTCTTAG

Coding sequence (CDS)

ATGGAGATATCATTACGCTTTCACTCAGCAATCACCGCAGCGGTGATTCTTATGACGGCCATCTGCCTGACTTCCCCTTGCCCGGCCGACGCCAAGCAGTGCGGGGACTGCATCAGGGACAGGATGGCGCTGCACTGCCCAGCCTGCGCACCGCCTCTGCGCTGCATGGCGCAGTGCCTGTGGGGCGGCGGTTCAAGGTGGAGGTGCGTTAAGCAGTGCGACGGCGGAGGTCAATGGGCGAGGCTGTCCACTTGTAAGCGTTGCATGTGGAGTTGCAAGTGCAGTTGTACCTCTTCTTCTTCTTAG

Protein sequence

MEISLRFHSAITAAVILMTAICLTSPCPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCVKQCDGGGQWARLSTCKRCMWSCKCSCTSSSS
Homology
[Close]
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match: A0A0A0LW71_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186620 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-28
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 1 

Query: 11  ITAAVILMTAICLTSPCPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCV 70
           IT  VILMTA+ LT  CPA+ K C DCIR+RM   CPACAPPLRCMAQCLWGG SR RCV
Sbjct: 8   ITEVVILMTAVWLTVGCPAEGKVCADCIRNRMEQDCPACAPPLRCMAQCLWGGDSRSRCV 67

Query: 71  KQCDGGGQWARLSTCKRCMWSCKCSCTSSS 101
            +CD GG WA L++CK+C+  CKC C+SSS
Sbjct: 68  NRCDSGGAWASLASCKQCITKCKCRCSSSS 97

[Close]
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match: A0A166H086_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002220 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.1e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 27 CPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGG-SRWRCVKQCDGGGQWARLSTC 86
          CPAD  +C DCI +RM   CPACAP +RCMAQCLW  G S+ +CVK+CD  G + R+S C
Sbjct: 28 CPADGSECKDCIANRMKSDCPACAPIMRCMAQCLWDKGMSQKQCVKKCDCDGGYPRVSDC 87

Query: 87 KRCMWSCKCSCT 98
          K+C+  CKCSC+
Sbjct: 88 KKCLLQCKCSCS 99

[Close]
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match: A5AHI4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033631 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-16
Identity = 46/89 (51.69%), Postives = 61/89 (68.54%), Query Frame = 1 

Query: 13 AAVILMTAI--CLTSP---CPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRW 72
          AAV+++  +   + SP   CP+D  +C DCI ++M   CP+CAP L CMA+CLWGG S+ 
Sbjct: 2  AAVLMLLLVFWLMISPALGCPSDGSECKDCIVNQMRNGCPSCAPVLXCMARCLWGGXSKS 61

Query: 73 RCVKQCDGGGQWARLSTCKRCMWSCKCSC 97
          +CVK+CD  G   RLS CK+CM  CKCSC
Sbjct: 62 KCVKRCDCYGGKPRLSDCKKCMSRCKCSC 90

[Close]
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match: M5WXW8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022792mg PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.3e-16
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 1 

Query: 27 CPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCVKQCD-GGGQWARLSTC 86
          CP+D  QC DC+ ++M   CP C P LRCMA+CLW G SR  CVK+C+ G G   +LS C
Sbjct: 17 CPSDGSQCRDCVANQMKFGCPECTPVLRCMARCLWRGSSRANCVKRCNCGSGGKPKLSDC 76

Query: 87 KRCMWSCKCSCTS 99
          K+CM  CKCSC S
Sbjct: 77 KKCMLRCKCSCMS 89

[Close]
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match: A0A0K9QPM4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155700 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.3e-16
Identity = 43/96 (44.79%), Postives = 60/96 (62.50%), Query Frame = 1 

Query: 2   EISLRFHSAITAAVILM-TAICLTSPCPADAKQCGDCIRDRMALHCPACAPPLRCMAQCL 61
           ++ L+  S + A +++   AI   S CP D+  C DCI  RM   CP+C   LRCMA+CL
Sbjct: 7   KMQLKLESFMLAVLLISWLAILPASACPNDSSDCKDCILRRMKYDCPSCVTALRCMAKCL 66

Query: 62  WGGGSRWRCVKQCDGGGQWARLSTCKRCMWSCKCSC 97
           W G SR +C+K+CD    + +LS CK+CM  C+CSC
Sbjct: 67  WAGTSRTKCIKRCDCNDGYPKLSDCKKCMSKCRCSC 102

[Close]
BLAST of Cp4.1LG09g06590 vs. TAIR10
Match: AT1G12064.1 (AT1G12064.1 unknown protein)

HSP 1 Score: 66.2 bits (160), Expect = 1.3e-11
Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 1 

Query: 28  PADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCVK--QCDGGGQWARLSTC 87
           P     C  C+ ++M   CP C P LRCMA+CLWGG ++ +C    +CD   +   L  C
Sbjct: 38  PPSQNSCKTCMAEQMKYDCPKCVPVLRCMARCLWGGVTQRKCTTTCRCDTAAK-PSLLEC 97

Query: 88  KRCMWSCKCSCTS 99
           KRC+  CKCSC +
Sbjct: 98  KRCVSRCKCSCAA 109

[Close]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match: gi|659118104|ref|XP_008458948.1| (PREDICTED: uncharacterized protein LOC103498207 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 5.8e-30
Identity = 65/91 (71.43%), Postives = 72/91 (79.12%), Query Frame = 1 

Query: 11  ITAAVILMTAICLTSPCPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCV 70
           I AAVILMTAI L   CPAD K C DCIR+RM   CPACAPPLRCMAQCLWGGGSR RCV
Sbjct: 8   IAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCV 67

Query: 71  KQCDGGGQWARLSTCKRCMWSCKCSCTSSSS 102
            +CD GG WA L++CK+C+  CKC C+SSSS
Sbjct: 68  NRCDSGGAWASLASCKQCISKCKCKCSSSSS 98

[Close]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match: gi|700209961|gb|KGN65057.1| (hypothetical protein Csa_1G186620 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 3.2e-28
Identity = 61/90 (67.78%), Postives = 70/90 (77.78%), Query Frame = 1 

Query: 11  ITAAVILMTAICLTSPCPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRWRCV 70
           IT  VILMTA+ LT  CPA+ K C DCIR+RM   CPACAPPLRCMAQCLWGG SR RCV
Sbjct: 8   ITEVVILMTAVWLTVGCPAEGKVCADCIRNRMEQDCPACAPPLRCMAQCLWGGDSRSRCV 67

Query: 71  KQCDGGGQWARLSTCKRCMWSCKCSCTSSS 101
            +CD GG WA L++CK+C+  CKC C+SSS
Sbjct: 68  NRCDSGGAWASLASCKQCITKCKCRCSSSS 97

[Close]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match: gi|1009107245|ref|XP_015878661.1| (PREDICTED: uncharacterized protein LOC107414952 [Ziziphus jujuba])

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-17
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 1 

Query: 11 ITAAVILMTAICLTSP---CPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGGSRW 70
          +   ++L+  + + SP   CP+D ++C  CI ++M   CPACAP LRCMA+CLW G SR 
Sbjct: 11 VVPMMLLVVWLMMISPAKGCPSDGRECKTCIVNQMKFGCPACAPILRCMARCLWSGSSRR 70

Query: 71 RCVKQCDGGGQWARLSTCKRCMWSCKCSC 97
           C+K+CD GG   +LS CK+CM  CKCSC
Sbjct: 71 NCIKRCDCGGGTPKLSDCKKCMSRCKCSC 99

[Close]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match: gi|731439325|ref|XP_010646205.1| (PREDICTED: uncharacterized protein LOC104878123 [Vitis vinifera])

HSP 1 Score: 95.5 bits (236), Expect = 5.6e-17
Identity = 47/99 (47.47%), Postives = 64/99 (64.65%), Query Frame = 1 

Query: 1  MEISLRFHSAITAAVILMTAICLTSP---CPADAKQCGDCIRDRMALHCPACAPPLRCMA 60
          ME + +  +     ++L+    + SP   CP+D  +C DCI ++M   CP+CAP LRCMA
Sbjct: 1  MEKNKQLSTMAAVLMLLLVFWLMISPALGCPSDGSECKDCIVNQMRNGCPSCAPVLRCMA 60

Query: 61 QCLWGGGSRWRCVKQCDGGGQWARLSTCKRCMWSCKCSC 97
          +CLWGG S+ +CVK+CD  G   RLS CK+CM  CKCSC
Sbjct: 61 RCLWGGTSKSKCVKRCDCYGGKPRLSDCKKCMSRCKCSC 99

[Close]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match: gi|1021051786|gb|KZN09564.1| (hypothetical protein DCAR_002220 [Daucus carota subsp. sativus])

HSP 1 Score: 95.1 bits (235), Expect = 7.3e-17
Identity = 42/72 (58.33%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 27 CPADAKQCGDCIRDRMALHCPACAPPLRCMAQCLWGGG-SRWRCVKQCDGGGQWARLSTC 86
          CPAD  +C DCI +RM   CPACAP +RCMAQCLW  G S+ +CVK+CD  G + R+S C
Sbjct: 28 CPADGSECKDCIANRMKSDCPACAPIMRCMAQCLWDKGMSQKQCVKKCDCDGGYPRVSDC 87

Query: 87 KRCMWSCKCSCT 98
          K+C+  CKCSC+
Sbjct: 88 KKCLLQCKCSCS 99

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g06590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG09g06590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW71_CUCSA2.2e-2867.78Uncharacterized protein OS=Cucumis sativus GN=Csa_1G186620 PE=4 SV=1[more]
A0A166H086_DAUCA5.1e-1758.33Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002220 PE=4 SV=1[more]
A5AHI4_VITVI1.5e-1651.69Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033631 PE=4 SV=1[more]
M5WXW8_PRUPE3.3e-1656.16Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022792mg PE=4 SV=1[more]
A0A0K9QPM4_SPIOL4.3e-1644.79Uncharacterized protein OS=Spinacia oleracea GN=SOVF_155700 PE=4 SV=1[more]
BLAST of Cp4.1LG09g06590 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12064.11.3e-1142.47 unknown protein[more]
BLAST of Cp4.1LG09g06590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118104|ref|XP_008458948.1|5.8e-3071.43PREDICTED: uncharacterized protein LOC103498207 [Cucumis melo][more]
gi|700209961|gb|KGN65057.1|3.2e-2867.78hypothetical protein Csa_1G186620 [Cucumis sativus][more]
gi|1009107245|ref|XP_015878661.1|1.9e-1749.44PREDICTED: uncharacterized protein LOC107414952 [Ziziphus jujuba][more]
gi|731439325|ref|XP_010646205.1|5.6e-1747.47PREDICTED: uncharacterized protein LOC104878123 [Vitis vinifera][more]
gi|1021051786|gb|KZN09564.1|7.3e-1758.33hypothetical protein DCAR_002220 [Daucus carota subsp. sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g06590.1Cp4.1LG09g06590.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g06590Cla009006Watermelon (97103) v1cpewmB041
Cp4.1LG09g06590Csa1G186620Cucumber (Chinese Long) v2cpecuB020
Cp4.1LG09g06590ClCG01G010240Watermelon (Charleston Gray)cpewcgB030
Cp4.1LG09g06590CSPI01G15960Wild cucumber (PI 183967)cpecpiB017
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g06590Cucumber (Gy14) v2cgybcpeB007
Cp4.1LG09g06590Cucumber (Chinese Long) v3cpecucB0021
Cp4.1LG09g06590Wax gourdcpewgoB0040
Cp4.1LG09g06590Cucurbita pepo (Zucchini)cpecpeB048
Cp4.1LG09g06590Cucurbita maxima (Rimu)cmacpeB212
Cp4.1LG09g06590Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g06590Cucurbita moschata (Rifu)cmocpeB182
Cp4.1LG09g06590Cucurbita moschata (Rifu)cmocpeB375
Cp4.1LG09g06590Bottle gourd (USVL1VR-Ls)cpelsiB027