Cp4.1LG09g05410 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g05410
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFe-S metabolism associated domain, SufE-like protein
LocationCp4.1LG09 : 3625542 .. 3626216 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCAAGCATTGAGTATCAATCGAAACTCGTGATTAGGAATGTGAAATACTTCCGGTTCAAATCGCTGAAATGCATTCGATATTGTGATTCTGATTCTGATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAGGCTTTTGCATTACGCTACGTTTCTGGCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACCAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGCCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACAAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

mRNA sequence

ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCAAGCATTGAGTATCAATCGAAACTCGTGATTAGGAATGTGAAATACTTCCGGTTCAAATCGCTGAAATGCATTCGATATTGTGATTCTGATTCTGATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAGGCTTTTGCATTACGCTACGTTTCTGGCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACCAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGCCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACAAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

Coding sequence (CDS)

ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCAAGCATTGAGTATCAATCGAAACTCGTGATTAGGAATGTGAAATACTTCCGGTTCAAATCGCTGAAATGCATTCGATATTGTGATTCTGATTCTGATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAGGCTTTTGCATTACGCTACGTTTCTGGCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACCAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGCCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACAAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

Protein sequence

MSSITSFRNASPYYNCFSKSSKRYNRSSIEYQSKLVIRNVKYFRFKSLKCIRYCDSDSDSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP
Homology
[Close]
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match: SUFE2_ARATH (SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=SUFE2 PE=2 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.4e-49
Identity = 101/176 (57.39%), Postives = 129/176 (73.30%), Query Frame = 1 

Query: 43  FRFKSLKCIR-YCDSDSDSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDR 102
           F  K + C+R   +  S+  + S   + +      +    +DKL  LVSEF +L +PIDR
Sbjct: 35  FSPKPITCMRDSLNLGSNPKAPSPFSLATVSVDAPLGTKTSDKLRILVSEFRSLTEPIDR 94

Query: 103 VKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCS 162
           VKRLL+YA  LAP+DESAR+SENRV GCT +VWLE+KMD+ GRMRFKADSDSEI+KGFCS
Sbjct: 95  VKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKADSDSEISKGFCS 154

Query: 163 CLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVS 218
           CLIW+L+GA+  EV+ V+ EDL+ MN+G   K QSRVNTW NVL+SMQ+RT  LV+
Sbjct: 155 CLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQKRTMTLVA 210

[Close]
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match: NADA_ARATH (Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana GN=QS PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.7e-40
Identity = 92/223 (41.26%), Postives = 138/223 (61.88%), Query Frame = 1 

Query: 2   SSITSFRNASPYYNCFSKSSKRYNRSSIEYQSKLVIRNVKYFRFKSLKCIRYCDSDSDSD 61
           SS++S  + +P        S  +  + + + S+  I  +     +S KC++    D ++ 
Sbjct: 12  SSLSSLLSRTP------NPSPNFRTTHLNFGSQRRIYTINPL-LRSFKCLQSSSRDVNAS 71

Query: 62  SSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARV 121
             S   + S   S    ELV  KL+RLV EF++L +PIDR+K +LHYA+ L  M ES++ 
Sbjct: 72  PFSISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKT 131

Query: 122 SENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIE 181
             NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +L+ A   EV+ +K E
Sbjct: 132 ESNRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTE 191

Query: 182 DLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 225
           DLA +N+G     +SRVNTW NVL+SMQ++T  LV+E+ G+ P
Sbjct: 192 DLAELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

[Close]
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match: NADA_ORYSJ (Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290150 PE=3 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 5.6e-25
Identity = 61/139 (43.88%), Postives = 83/139 (59.71%), Query Frame = 1 

Query: 84  KLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNG 143
           ++ RL  EF       DR +RLL  A  L  + E+ RV+ NRV GC  +VWL  + D  G
Sbjct: 69  RVSRLAEEFRVSPDAADRARRLLARAAALPRLGEADRVAANRVMGCVAQVWLVGRCDGAG 128

Query: 144 RMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAM-NLGPPIKAQSRVNTWQ 203
           RMRF ADSDSE+++G+C+CL+  L+GA   EVL V   DLA +        A+SR +TW 
Sbjct: 129 RMRFAADSDSELSRGYCACLVSALDGARPEEVLDVDPADLAPLGGAAAGTGARSRASTWH 188

Query: 204 NVLISMQQRTSDLVSEKNG 222
           NVLI MQ+R    ++ + G
Sbjct: 189 NVLIGMQKRARAAIAAREG 207

[Close]
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match: SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 4.9e-13
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 1 

Query: 79  ELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVK 138
           E +  KL+ +V  F+++++P  + ++L+ Y   L P+D   +  EN+V GC  +VW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRV 198
            D+   + ++ADSDS +TKG  + L+  L+G    E+L +  +    + L   + + SR 
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSL-SPSRN 200

Query: 199 NTWQNVLISMQQRTSDLVSEKNGE 223
           N   N+L  MQ++   L  E  GE
Sbjct: 201 NGLLNMLKLMQKKALHL--EVKGE 221

[Close]
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match: Y1419_SYNY3 (Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1419 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 1 

Query: 85  LERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGR 144
           L ++V  F+    P  R ++LL Y   L PM E  +++ N+V GC  +V++   ++D G+
Sbjct: 22  LAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAANKVQGCVSQVYITADLED-GK 81

Query: 145 MRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNV 204
           + ++ DSD+++ KG  + LI  LNG   +E++ +  + + A  L   +   SR N + N+
Sbjct: 82  VMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVELTPDFIEATGLQVSL-TPSRANGFYNI 141

Query: 205 LISMQQR 212
              MQ +
Sbjct: 142 FKMMQTK 146

[Close]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match: R0HX30_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021937mg PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-48
Identity = 105/183 (57.38%), Postives = 135/183 (73.77%), Query Frame = 1 

Query: 46  KSLKCIRYCDSDSDSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRL 105
           K+++C+R  DS   + +++S  +        +    +DKL  LVSEF +L +PIDRVKRL
Sbjct: 42  KTIRCMR--DSSLSTPNATSPSLSFATVEAPLGTKTSDKLRILVSEFRSLTEPIDRVKRL 101

Query: 106 LHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIW 165
           L+YA  LAP+D+SARVS NRV GCT +VWLEVKMD+ GRMRFKADSDSEI+KGFCSCLIW
Sbjct: 102 LNYAADLAPLDDSARVSANRVTGCTTQVWLEVKMDEYGRMRFKADSDSEISKGFCSCLIW 161

Query: 166 MLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDL----VSEKNG 225
           +L+GA+  EV+ V+ EDL+ MN+G   K QSRVNTWQNVL+SMQ+RT  L    V+ + G
Sbjct: 162 ILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWQNVLMSMQKRTMTLVAADVAHRGG 221

[Close]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match: B9IF02_POPTR (Quinolinate synthetase A-related family protein OS=Populus trichocarpa GN=POPTR_0015s09690g PE=4 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-48
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 1 

Query: 45  FKSLKCIRYCDSDSDSDSSSSMIMRSQKPS-GMIPELVADKLERLVSEFEALEKPIDRVK 104
           FKS+KCI     +    +SS  I  +   S   I ELV  KL  L++EF++L +P+DRVK
Sbjct: 44  FKSVKCIHSPPPNPKPSNSSPFICTAVTFSPSQITELVPSKLHHLITEFQSLSQPVDRVK 103

Query: 105 RLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCL 164
           RLLHYATFL+P+ +S RV  NRV GCT +VWLE ++D  G+MRF ADSDSEIT+GFC+CL
Sbjct: 104 RLLHYATFLSPLPDSYRVDSNRVMGCTAQVWLEAQLDQYGKMRFWADSDSEITRGFCACL 163

Query: 165 IWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGE 223
           IW+L+GA   EVL V  EDL A+N+G P+ A+SRVNTW NVL+SMQ+R   LV+E++G+
Sbjct: 164 IWVLDGAVPEEVLKVTTEDLTALNVGLPVGARSRVNTWHNVLVSMQKRARMLVAERDGK 222

[Close]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match: A0A061E8L8_THECC (Sulfur E2 OS=Theobroma cacao GN=TCM_010587 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 5.6e-48
Identity = 94/146 (64.38%), Postives = 118/146 (80.82%), Query Frame = 1 

Query: 79  ELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVK 138
           E V+DK++ LVSEF++L +P+DRVKRLLHYA  LAP DESARV ENRV GC  +VWL+ +
Sbjct: 78  EGVSDKIQLLVSEFKSLTEPVDRVKRLLHYAAMLAPFDESARVPENRVKGCATQVWLDAR 137

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRV 198
           +D NG++RF+ADSDSEITKGFCSCLIWM++GA+  EV+ V+ EDL  +N+G   KAQSRV
Sbjct: 138 IDQNGKVRFRADSDSEITKGFCSCLIWMMDGADPEEVVEVRAEDLVELNVGVHGKAQSRV 197

Query: 199 NTWQNVLISMQQRTSDLVSEKNGESP 225
           NTWQNVLISM+ RT  L+ E+  E P
Sbjct: 198 NTWQNVLISMRDRTEGLMLERQRELP 223

[Close]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match: A0A140B478_PRUPE (NFS2 activator 4 OS=Prunus persica var. persica GN=SUFE3 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1 

Query: 46  KSLKCIRYCDSDSDSDSSSSMIMRSQKP---------SGMIPELVADKLERLVSEFEALE 105
           KSLKCI+   S+S+         RS  P         S    ELV  KL+ L+SEF+AL 
Sbjct: 53  KSLKCIQTPPSNSNPLKQPLKNPRSASPLSCSALTLSSSQTTELVPCKLQTLISEFQALS 112

Query: 106 KPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEIT 165
           +PIDRVKRLLHYAT L P ++S RV  NRV GCT +VWLE KMD  G+MRF ADSDSEIT
Sbjct: 113 EPIDRVKRLLHYATLLPPFNDSDRVDSNRVMGCTAQVWLEAKMDKEGKMRFSADSDSEIT 172

Query: 166 KGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLV 225
           KGFCSCL+ +L+GA   EVL VK +DL+++N+G P   +SRVNTW NVL+SMQ++T  LV
Sbjct: 173 KGFCSCLVSVLDGASPDEVLMVKTDDLSSLNVGLPGAQRSRVNTWHNVLVSMQKKTKALV 232

[Close]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match: M5WG82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001921mg PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.8e-47
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1 

Query: 46  KSLKCIRYCDSDSDSDSSSSMIMRSQKP---------SGMIPELVADKLERLVSEFEALE 105
           KSLKCI+   S+S+         RS  P         S    ELV  KL+ L+SEF+AL 
Sbjct: 53  KSLKCIQTPPSNSNPLKQPLKNPRSASPLSCSALTLSSSQTTELVPCKLQTLISEFQALS 112

Query: 106 KPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEIT 165
           +PIDRVKRLLHYAT L P ++S RV  NRV GCT +VWLE KMD  G+MRF ADSDSEIT
Sbjct: 113 EPIDRVKRLLHYATLLPPFNDSDRVDSNRVMGCTAQVWLEAKMDKEGKMRFSADSDSEIT 172

Query: 166 KGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLV 225
           KGFCSCL+ +L+GA   EVL VK +DL+++N+G P   +SRVNTW NVL+SMQ++T  LV
Sbjct: 173 KGFCSCLVSVLDGASPDEVLMVKTDDLSSLNVGLPGAQRSRVNTWHNVLVSMQKKTKALV 232

[Close]
BLAST of Cp4.1LG09g05410 vs. TAIR10
Match: AT1G67810.1 (AT1G67810.1 sulfur E2)

HSP 1 Score: 194.9 bits (494), Expect = 5.3e-50
Identity = 101/176 (57.39%), Postives = 129/176 (73.30%), Query Frame = 1 

Query: 43  FRFKSLKCIR-YCDSDSDSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDR 102
           F  K + C+R   +  S+  + S   + +      +    +DKL  LVSEF +L +PIDR
Sbjct: 35  FSPKPITCMRDSLNLGSNPKAPSPFSLATVSVDAPLGTKTSDKLRILVSEFRSLTEPIDR 94

Query: 103 VKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCS 162
           VKRLL+YA  LAP+DESAR+SENRV GCT +VWLE+KMD+ GRMRFKADSDSEI+KGFCS
Sbjct: 95  VKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKADSDSEISKGFCS 154

Query: 163 CLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVS 218
           CLIW+L+GA+  EV+ V+ EDL+ MN+G   K QSRVNTW NVL+SMQ+RT  LV+
Sbjct: 155 CLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQKRTMTLVA 210

[Close]
BLAST of Cp4.1LG09g05410 vs. TAIR10
Match: AT5G50210.1 (AT5G50210.1 quinolinate synthase)

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-41
Identity = 92/223 (41.26%), Postives = 138/223 (61.88%), Query Frame = 1 

Query: 2   SSITSFRNASPYYNCFSKSSKRYNRSSIEYQSKLVIRNVKYFRFKSLKCIRYCDSDSDSD 61
           SS++S  + +P        S  +  + + + S+  I  +     +S KC++    D ++ 
Sbjct: 12  SSLSSLLSRTP------NPSPNFRTTHLNFGSQRRIYTINPL-LRSFKCLQSSSRDVNAS 71

Query: 62  SSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARV 121
             S   + S   S    ELV  KL+RLV EF++L +PIDR+K +LHYA+ L  M ES++ 
Sbjct: 72  PFSISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKT 131

Query: 122 SENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIE 181
             NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +L+ A   EV+ +K E
Sbjct: 132 ESNRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTE 191

Query: 182 DLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 225
           DLA +N+G     +SRVNTW NVL+SMQ++T  LV+E+ G+ P
Sbjct: 192 DLAELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

[Close]
BLAST of Cp4.1LG09g05410 vs. TAIR10
Match: AT4G26500.1 (AT4G26500.1 chloroplast sulfur E)

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-14
Identity = 44/144 (30.56%), Postives = 78/144 (54.17%), Query Frame = 1 

Query: 79  ELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVK 138
           E +  KL+ +V  F+++++P  + ++L+ Y   L P+D   +  EN+V GC  +VW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRV 198
            D+   + ++ADSDS +TKG  + L+  L+G    E+L +  +    + L   + + SR 
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSL-SPSRN 200

Query: 199 NTWQNVLISMQQRTSDLVSEKNGE 223
           N   N+L  MQ++   L  E  GE
Sbjct: 201 NGLLNMLKLMQKKALHL--EVKGE 221

[Close]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match: gi|359491073|ref|XP_002276849.2| (PREDICTED: quinolinate synthase, chloroplastic [Vitis vinifera])

HSP 1 Score: 206.1 bits (523), Expect = 6.5e-50
Identity = 108/190 (56.84%), Postives = 132/190 (69.47%), Query Frame = 1 

Query: 45  FKSLKCIRYCDSDSDSDSSSSMIMRSQKPS------------GMIPELVADKLERLVSEF 104
           FKS++CI+    DS   S S +   S+ P                 EL + KL RL+SEF
Sbjct: 48  FKSIRCIQSPPPDSAPSSQSPLKPNSRSPGFSFSCSAVSFSPSRTSELASCKLGRLISEF 107

Query: 105 EALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSD 164
             LE+P+DRVKRLLHYA+ L P++ESARV+ NRV GCT +VWLEVKMD  GRMRF ADSD
Sbjct: 108 RTLEEPVDRVKRLLHYASVLPPLEESARVAGNRVMGCTAQVWLEVKMDGEGRMRFAADSD 167

Query: 165 SEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRT 223
           SEITKGFCSCLIW+L+GA   EVLA+K +DLAA+N+G P    SRVNTW NVLI M +RT
Sbjct: 168 SEITKGFCSCLIWVLDGAAPEEVLALKTDDLAALNVGLPGAGHSRVNTWHNVLIVMHKRT 227

[Close]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match: gi|747050189|ref|XP_011071158.1| (PREDICTED: sufE-like protein 2, chloroplastic [Sesamum indicum])

HSP 1 Score: 202.2 bits (513), Expect = 9.5e-49
Identity = 100/158 (63.29%), Postives = 121/158 (76.58%), Query Frame = 1 

Query: 63  SSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVS 122
           S S +  +Q P   IP  V++K++ L  EF++L +PIDRVKRLLHYA  L P DES R  
Sbjct: 122 SLSCLTINQHPVAQIPS-VSEKVQNLDFEFKSLPEPIDRVKRLLHYAALLPPFDESLRTQ 181

Query: 123 ENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIED 182
           ENRV GCT +VWLEVKMD NG MRF+ DSDSEITKGF SCL+W+L+GAEA EVL+VKI+D
Sbjct: 182 ENRVFGCTAQVWLEVKMDGNGAMRFRVDSDSEITKGFSSCLVWLLDGAEAEEVLSVKIDD 241

Query: 183 LAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKN 221
           L  MN+G P +  SRVNTW NVLISMQ+RT DLV E++
Sbjct: 242 LVEMNVGLPSRGNSRVNTWHNVLISMQRRTKDLVEERS 278

[Close]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match: gi|645230340|ref|XP_008221892.1| (PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Prunus mume])

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 1 

Query: 20  SSKRYNRSSIEYQSKLVIR-NVKYFRFKSLKCIRYCDSDSDSDSSSSMIMRSQKPSGMIP 79
           SSKR   +    Q KL  R N + F  KS+KCI+     + + + +S +  ++ P   + 
Sbjct: 24  SSKRQAHNPRHVQLKLDKRQNGRNFLSKSIKCIQNRGIRNPT-ALASCLAATEAPPSKVA 83

Query: 80  ELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVK 139
           ELVADKL+RLV EF++L +PIDRVKRLLHYA  L P +ES R  E+RV GC+ +VW+E +
Sbjct: 84  ELVADKLKRLVLEFKSLAEPIDRVKRLLHYAAGLPPYNESTRKPESRVPGCSTQVWVEAE 143

Query: 140 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRV 199
           MD+ GRMRF+ADSDSEI+KGFCSCLIWML+GAEA+EVL VK  DL  +N+G   K  SRV
Sbjct: 144 MDELGRMRFRADSDSEISKGFCSCLIWMLDGAEAAEVLEVKTRDLEDVNVGVYGKVNSRV 203

Query: 200 NTWQNVLISMQQRTSDLVSEKNGE 223
           NTW NVL++MQ++T  LV+E+ G+
Sbjct: 204 NTWHNVLLAMQRKTEALVAEREGK 226

[Close]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match: gi|645230335|ref|XP_008221890.1| (PREDICTED: sufE-like protein 2, chloroplastic isoform X1 [Prunus mume])

HSP 1 Score: 201.4 bits (511), Expect = 1.6e-48
Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 1 

Query: 20  SSKRYNRSSIEYQSKLVIR-NVKYFRFKSLKCIRYCDSDSDSDSSSSMIMRSQKPSGMIP 79
           SSKR   +    Q KL  R N + F  KS+KCI+     + + + +S +  ++ P   + 
Sbjct: 24  SSKRQAHNPRHVQLKLDKRQNGRNFLSKSIKCIQNRGIRNPT-ALASCLAATEAPPSKVA 83

Query: 80  ELVADKLERLVSEFEALEKPIDRVKRLLHYATFLAPMDESARVSENRVAGCTVEVWLEVK 139
           ELVADKL+RLV EF++L +PIDRVKRLLHYA  L P +ES R  E+RV GC+ +VW+E +
Sbjct: 84  ELVADKLKRLVLEFKSLAEPIDRVKRLLHYAAGLPPYNESTRKPESRVPGCSTQVWVEAE 143

Query: 140 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRV 199
           MD+ GRMRF+ADSDSEI+KGFCSCLIWML+GAEA+EVL VK  DL  +N+G   K  SRV
Sbjct: 144 MDELGRMRFRADSDSEISKGFCSCLIWMLDGAEAAEVLEVKTRDLEDVNVGVYGKVNSRV 203

Query: 200 NTWQNVLISMQQRTSDLVSEKNGE 223
           NTW NVL++MQ++T  LV+E+ G+
Sbjct: 204 NTWHNVLLAMQRKTEALVAEREGK 226

[Close]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match: gi|566206811|ref|XP_002322206.2| (quinolinate synthetase A-related family protein [Populus trichocarpa])

HSP 1 Score: 199.9 bits (507), Expect = 4.7e-48
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 1 

Query: 45  FKSLKCIRYCDSDSDSDSSSSMIMRSQKPS-GMIPELVADKLERLVSEFEALEKPIDRVK 104
           FKS+KCI     +    +SS  I  +   S   I ELV  KL  L++EF++L +P+DRVK
Sbjct: 44  FKSVKCIHSPPPNPKPSNSSPFICTAVTFSPSQITELVPSKLHHLITEFQSLSQPVDRVK 103

Query: 105 RLLHYATFLAPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCL 164
           RLLHYATFL+P+ +S RV  NRV GCT +VWLE ++D  G+MRF ADSDSEIT+GFC+CL
Sbjct: 104 RLLHYATFLSPLPDSYRVDSNRVMGCTAQVWLEAQLDQYGKMRFWADSDSEITRGFCACL 163

Query: 165 IWMLNGAEASEVLAVKIEDLAAMNLGPPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGE 223
           IW+L+GA   EVL V  EDL A+N+G P+ A+SRVNTW NVL+SMQ+R   LV+E++G+
Sbjct: 164 IWVLDGAVPEEVLKVTTEDLTALNVGLPVGARSRVNTWHNVLVSMQKRARMLVAERDGK 222

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g05410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SUFE2_ARATH9.4e-4957.39SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=SUFE2 PE=2 SV=1[more]
NADA_ARATH4.7e-4041.26Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana GN=QS PE=1 SV=1[more]
NADA_ORYSJ5.6e-2543.88Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290... [more]
SUFE1_ARATH4.9e-1330.56SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE... [more]
Y1419_SYNY33.5e-1129.92Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 ... [more]
BLAST of Cp4.1LG09g05410 vs. TrEMBL
Match NameE-valueIdentityDescription
R0HX30_9BRAS3.3e-4857.38Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021937mg PE=4 SV=1[more]
B9IF02_POPTR3.3e-4855.87Quinolinate synthetase A-related family protein OS=Populus trichocarpa GN=POPTR_... [more]
A0A061E8L8_THECC5.6e-4864.38Sulfur E2 OS=Theobroma cacao GN=TCM_010587 PE=4 SV=1[more]
A0A140B478_PRUPE2.8e-4755.32NFS2 activator 4 OS=Prunus persica var. persica GN=SUFE3 PE=2 SV=1[more]
M5WG82_PRUPE2.8e-4755.32Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001921mg PE=4 SV=1[more]
BLAST of Cp4.1LG09g05410 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67810.15.3e-5057.39 sulfur E2[more]
AT5G50210.12.6e-4141.26 quinolinate synthase[more]
AT4G26500.12.8e-1430.56 chloroplast sulfur E[more]
BLAST of Cp4.1LG09g05410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|359491073|ref|XP_002276849.2|6.5e-5056.84PREDICTED: quinolinate synthase, chloroplastic [Vitis vinifera][more]
gi|747050189|ref|XP_011071158.1|9.5e-4963.29PREDICTED: sufE-like protein 2, chloroplastic [Sesamum indicum][more]
gi|645230340|ref|XP_008221892.1|1.6e-4853.92PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Prunus mume][more]
gi|645230335|ref|XP_008221890.1|1.6e-4853.92PREDICTED: sufE-like protein 2, chloroplastic isoform X1 [Prunus mume][more]
gi|566206811|ref|XP_002322206.2|4.7e-4855.87quinolinate synthetase A-related family protein [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003808Fe-S_metab-assoc_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0044711 single-organism biosynthetic process
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0051176 positive regulation of sulfur metabolic process
biological_process GO:0019805 quinolinate biosynthetic process
biological_process GO:0008150 biological_process
biological_process GO:0044281 small molecule metabolic process
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0009435 NAD biosynthetic process
biological_process GO:0044763 single-organism cellular process
biological_process GO:0072525 pyridine-containing compound biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
cellular_component GO:0009507 chloroplast
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008987 quinolinate synthetase A activity
molecular_function GO:0008047 enzyme activator activity
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g05410.1Cp4.1LG09g05410.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003808Fe-S metabolism associated domain, SufE-likePFAMPF02657SufEcoord: 90..210
score: 4.8
NoneNo IPR availableGENE3DG3DSA:3.90.1010.10coord: 81..220
score: 8.7
NoneNo IPR availablePANTHERPTHR30573QUINOLINATE SYNTHETASE Acoord: 136..224
score: 9.6
NoneNo IPR availablePANTHERPTHR30573:SF3QUINOLINATE SYNTHASE, CHLOROPLASTICcoord: 136..224
score: 9.6
NoneNo IPR availableunknownSSF82649SufE/NifUcoord: 83..217
score: 6.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g05410Cucsa.394570Cucumber (Gy14) v1cgycpeB1037
Cp4.1LG09g05410CmaCh12G000380Cucurbita maxima (Rimu)cmacpeB167
Cp4.1LG09g05410CmaCh18G007570Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g05410CmoCh18G007610Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g05410Cla022736Watermelon (97103) v1cpewmB022
Cp4.1LG09g05410Cla010033Watermelon (97103) v1cpewmB028
Cp4.1LG09g05410Csa2G349630Cucumber (Chinese Long) v2cpecuB034
Cp4.1LG09g05410MELO3C010697Melon (DHL92) v3.5.1cpemeB037
Cp4.1LG09g05410ClCG05G025860Watermelon (Charleston Gray)cpewcgB041
Cp4.1LG09g05410ClCG08G017640Watermelon (Charleston Gray)cpewcgB054
Cp4.1LG09g05410CSPI02G17390Wild cucumber (PI 183967)cpecpiB030
Cp4.1LG09g05410Lsi04G006030Bottle gourd (USVL1VR-Ls)cpelsiB030
Cp4.1LG09g05410Lsi08G016380Bottle gourd (USVL1VR-Ls)cpelsiB045
Cp4.1LG09g05410MELO3C010697.2Melon (DHL92) v3.6.1cpemedB043
Cp4.1LG09g05410CsaV3_2G025000Cucumber (Chinese Long) v3cpecucB0035
Cp4.1LG09g05410Bhi07G001445Wax gourdcpewgoB0054
Cp4.1LG09g05410Bhi04G000581Wax gourdcpewgoB0031
Cp4.1LG09g05410CsGy2G017370Cucumber (Gy14) v2cgybcpeB154
Cp4.1LG09g05410Carg20488Silver-seed gourdcarcpeB0886
Cp4.1LG09g05410Carg14508Silver-seed gourdcarcpeB1017
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g05410Cucumber (Chinese Long) v3cpecucB0051
Cp4.1LG09g05410Cucurbita pepo (Zucchini)cpecpeB020
Cp4.1LG09g05410Cucurbita pepo (Zucchini)cpecpeB033
Cp4.1LG09g05410Cucumber (Gy14) v1cgycpeB0744
Cp4.1LG09g05410Cucurbita maxima (Rimu)cmacpeB694
Cp4.1LG09g05410Cucurbita maxima (Rimu)cmacpeB764
Cp4.1LG09g05410Cucurbita moschata (Rifu)cmocpeB646
Cp4.1LG09g05410Cucurbita moschata (Rifu)cmocpeB718
Cp4.1LG09g05410Wild cucumber (PI 183967)cpecpiB042
Cp4.1LG09g05410Cucumber (Chinese Long) v2cpecuB047
Cp4.1LG09g05410Melon (DHL92) v3.5.1cpemeB021
Cp4.1LG09g05410Cucumber (Gy14) v2cgybcpeB588
Cp4.1LG09g05410Melon (DHL92) v3.6.1cpemedB025
Cp4.1LG09g05410Silver-seed gourdcarcpeB0341