CmoCh18G007610 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh18G007610
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cysteine desulfuration protein sufE, putative
Location	Cmo_Chr18 : 9223954 .. 9224628 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCGAACATTGAGTATCAATCGAAACTCGTGATTGGGAATGTGAAATACTTCCGGTTCAAATCTCTGAAATGCATTCGATATTGTGATTCTGATTCTAATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAAGCTTTTGCATTACGCTACGTTTCTGTCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACAAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGTCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACCAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

mRNA sequence

ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCGAACATTGAGTATCAATCGAAACTCGTGATTGGGAATGTGAAATACTTCCGGTTCAAATCTCTGAAATGCATTCGATATTGTGATTCTGATTCTAATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAAGCTTTTGCATTACGCTACGTTTCTGTCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACAAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGTCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACCAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

Coding sequence (CDS)

ATGAGTTCGATCACATCCTTTAGAAATGCTTCTCCGTACTATAACTGCTTCTCGAAATCATCGAAACGCTATAATCGTTCGAACATTGAGTATCAATCGAAACTCGTGATTGGGAATGTGAAATACTTCCGGTTCAAATCTCTGAAATGCATTCGATATTGTGATTCTGATTCTAATTCTGATTCAAGTTCCTCGATGATAATGCGATCTCAAAAACCTAGCGGAATGATACCTGAACTCGTCGCTGATAAACTTGAACGGCTTGTGAGTGAATTCGAGGCTCTTGAAAAGCCGATTGATCGAGTGAAGAAGCTTTTGCATTACGCTACGTTTCTGTCTCCAATGGATGAATCGGCTCGGGTTTCTGAAAACAGAGTCGCAGGATGTACGGTTGAGGTATGGTTGGAAGTGAAAATGGACGATAATGGAAGGATGAGATTCAAAGCGGACAGCGATTCTGAAATTACAAAAGGATTCTGTTCTTGCTTGATATGGATGCTGAACGGGGCGGAGGCTTCGGAGGTTTTGGCAGTGAAGATTGAGGATTTGGCGGCCATGAATTTGGGGTCTCCGATCAAGGCGCAATCCAGAGTAAATACTTGGCAAAATGTGTTGATTAGTATGCAACAAAGAACCAGTGATTTAGTTTCAGAGAAAAATGGAGAATCGCCTTAG

Homology

[Close]

BLAST of CmoCh18G007610 vs. Swiss-Prot
Match: SUFE2_ARATH (SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=SUFE2 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-48
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 1


Query: 43  FRFKSLKCIR-YCDSDSNSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDR 102
           F  K + C+R   +  SN  + S   + +      +    +DKL  LVSEF +L +PIDR
Sbjct: 35  FSPKPITCMRDSLNLGSNPKAPSPFSLATVSVDAPLGTKTSDKLRILVSEFRSLTEPIDR 94

Query: 103 VKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCS 162
           VK+LL+YA  L+P+DESAR+SENRV GCT +VWLE+KMD+ GRMRFKADSDSEI+KGFCS
Sbjct: 95  VKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKADSDSEISKGFCS 154

Query: 163 CLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVS 218
           CLIW+L+GA+  EV+ V+ EDL+ MN+G   K QSRVNTW NVL+SMQ+RT  LV+
Sbjct: 155 CLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQKRTMTLVA 210

[Close]

BLAST of CmoCh18G007610 vs. Swiss-Prot
Match: NADA_ARATH (Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana GN=QS PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.2e-41
Identity = 93/223 (41.70%), Postives = 139/223 (62.33%), Query Frame = 1


Query: 2   SSITSFRNASPYYNCFSKSSKRYNRSNIEYQSKLVIGNVKYFRFKSLKCIRYCDSDSNSD 61
           SS++S  + +P        S  +  +++ + S+  I  +     +S KC++    D N+ 
Sbjct: 12  SSLSSLLSRTP------NPSPNFRTTHLNFGSQRRIYTINPL-LRSFKCLQSSSRDVNAS 71

Query: 62  SSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARV 121
             S   + S   S    ELV  KL+RLV EF++L +PIDR+K +LHYA+ L  M ES++ 
Sbjct: 72  PFSISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKT 131

Query: 122 SENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIE 181
             NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +L+ A   EV+ +K E
Sbjct: 132 ESNRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTE 191

Query: 182 DLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 225
           DLA +N+G     +SRVNTW NVL+SMQ++T  LV+E+ G+ P
Sbjct: 192 DLAELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

[Close]

BLAST of CmoCh18G007610 vs. Swiss-Prot
Match: NADA_ORYSJ (Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290150 PE=3 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 9.5e-25
Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 1


Query: 84  KLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNG 143
           ++ RL  EF       DR ++LL  A  L  + E+ RV+ NRV GC  +VWL  + D  G
Sbjct: 69  RVSRLAEEFRVSPDAADRARRLLARAAALPRLGEADRVAANRVMGCVAQVWLVGRCDGAG 128

Query: 144 RMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAM-NLGSPIKAQSRVNTWQ 203
           RMRF ADSDSE+++G+C+CL+  L+GA   EVL V   DLA +    +   A+SR +TW 
Sbjct: 129 RMRFAADSDSELSRGYCACLVSALDGARPEEVLDVDPADLAPLGGAAAGTGARSRASTWH 188

Query: 204 NVLISMQQRTSDLVSEKNG 222
           NVLI MQ+R    ++ + G
Sbjct: 189 NVLIGMQKRARAAIAAREG 207

[Close]

BLAST of CmoCh18G007610 vs. Swiss-Prot
Match: SUFE1_ARATH (SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE1 PE=1 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.9e-13
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 1


Query: 79  ELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVK 138
           E +  KL+ +V  F+++++P  + ++L+ Y   L+P+D   +  EN+V GC  +VW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRV 198
            D+   + ++ADSDS +TKG  + L+  L+G    E+L +  +    + L   + + SR 
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSL-SPSRN 200

Query: 199 NTWQNVLISMQQRTSDLVSEKNGE 223
           N   N+L  MQ++   L  E  GE
Sbjct: 201 NGLLNMLKLMQKKALHL--EVKGE 221

[Close]

BLAST of CmoCh18G007610 vs. Swiss-Prot
Match: Y1419_SYNY3 (Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1419 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.6e-11
Identity = 38/127 (29.92%), Postives = 70/127 (55.12%), Query Frame = 1


Query: 85  LERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGR 144
           L ++V  F+    P  R ++LL Y   L PM E  +++ N+V GC  +V++   ++D G+
Sbjct: 22  LAKIVERFQRHTDPKKRYEQLLWYGKKLEPMMEEGKIAANKVQGCVSQVYITADLED-GK 81

Query: 145 MRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNV 204
           + ++ DSD+++ KG  + LI  LNG   +E++ +  + + A  L   +   SR N + N+
Sbjct: 82  VMYQGDSDAQLVKGLVALLIQGLNGLTPTEIVELTPDFIEATGLQVSL-TPSRANGFYNI 141

Query: 205 LISMQQR 212
              MQ +
Sbjct: 142 FKMMQTK 146

[Close]

BLAST of CmoCh18G007610 vs. TrEMBL
Match: B9IF02_POPTR (Quinolinate synthetase A-related family protein OS=Populus trichocarpa GN=POPTR_0015s09690g PE=4 SV=2)

HSP 1 Score: 199.9 bits (507), Expect = 3.3e-48
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 45  FKSLKCIRYCDSDSNSDSSSSMIMRSQKPS-GMIPELVADKLERLVSEFEALEKPIDRVK 104
           FKS+KCI     +    +SS  I  +   S   I ELV  KL  L++EF++L +P+DRVK
Sbjct: 44  FKSVKCIHSPPPNPKPSNSSPFICTAVTFSPSQITELVPSKLHHLITEFQSLSQPVDRVK 103

Query: 105 KLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCL 164
           +LLHYATFLSP+ +S RV  NRV GCT +VWLE ++D  G+MRF ADSDSEIT+GFC+CL
Sbjct: 104 RLLHYATFLSPLPDSYRVDSNRVMGCTAQVWLEAQLDQYGKMRFWADSDSEITRGFCACL 163

Query: 165 IWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGE 223
           IW+L+GA   EVL V  EDL A+N+G P+ A+SRVNTW NVL+SMQ+R   LV+E++G+
Sbjct: 164 IWVLDGAVPEEVLKVTTEDLTALNVGLPVGARSRVNTWHNVLVSMQKRARMLVAERDGK 222

[Close]

BLAST of CmoCh18G007610 vs. TrEMBL
Match: A0A140B478_PRUPE (NFS2 activator 4 OS=Prunus persica var. persica GN=SUFE3 PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1


Query: 46  KSLKCIRYCDSDSNSDSSSSMIMRSQKP---------SGMIPELVADKLERLVSEFEALE 105
           KSLKCI+   S+SN         RS  P         S    ELV  KL+ L+SEF+AL 
Sbjct: 53  KSLKCIQTPPSNSNPLKQPLKNPRSASPLSCSALTLSSSQTTELVPCKLQTLISEFQALS 112

Query: 106 KPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEIT 165
           +PIDRVK+LLHYAT L P ++S RV  NRV GCT +VWLE KMD  G+MRF ADSDSEIT
Sbjct: 113 EPIDRVKRLLHYATLLPPFNDSDRVDSNRVMGCTAQVWLEAKMDKEGKMRFSADSDSEIT 172

Query: 166 KGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLV 225
           KGFCSCL+ +L+GA   EVL VK +DL+++N+G P   +SRVNTW NVL+SMQ++T  LV
Sbjct: 173 KGFCSCLVSVLDGASPDEVLMVKTDDLSSLNVGLPGAQRSRVNTWHNVLVSMQKKTKALV 232

[Close]

BLAST of CmoCh18G007610 vs. TrEMBL
Match: M5WG82_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001921mg PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 104/188 (55.32%), Postives = 129/188 (68.62%), Query Frame = 1


Query: 46  KSLKCIRYCDSDSNSDSSSSMIMRSQKP---------SGMIPELVADKLERLVSEFEALE 105
           KSLKCI+   S+SN         RS  P         S    ELV  KL+ L+SEF+AL 
Sbjct: 53  KSLKCIQTPPSNSNPLKQPLKNPRSASPLSCSALTLSSSQTTELVPCKLQTLISEFQALS 112

Query: 106 KPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEIT 165
           +PIDRVK+LLHYAT L P ++S RV  NRV GCT +VWLE KMD  G+MRF ADSDSEIT
Sbjct: 113 EPIDRVKRLLHYATLLPPFNDSDRVDSNRVMGCTAQVWLEAKMDKEGKMRFSADSDSEIT 172

Query: 166 KGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLV 225
           KGFCSCL+ +L+GA   EVL VK +DL+++N+G P   +SRVNTW NVL+SMQ++T  LV
Sbjct: 173 KGFCSCLVSVLDGASPDEVLMVKTDDLSSLNVGLPGAQRSRVNTWHNVLVSMQKKTKALV 232

[Close]

BLAST of CmoCh18G007610 vs. TrEMBL
Match: A0A061E8L8_THECC (Sulfur E2 OS=Theobroma cacao GN=TCM_010587 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.6e-47
Identity = 92/146 (63.01%), Postives = 118/146 (80.82%), Query Frame = 1


Query: 79  ELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVK 138
           E V+DK++ LVSEF++L +P+DRVK+LLHYA  L+P DESARV ENRV GC  +VWL+ +
Sbjct: 78  EGVSDKIQLLVSEFKSLTEPVDRVKRLLHYAAMLAPFDESARVPENRVKGCATQVWLDAR 137

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRV 198
           +D NG++RF+ADSDSEITKGFCSCLIWM++GA+  EV+ V+ EDL  +N+G   KAQSRV
Sbjct: 138 IDQNGKVRFRADSDSEITKGFCSCLIWMMDGADPEEVVEVRAEDLVELNVGVHGKAQSRV 197

Query: 199 NTWQNVLISMQQRTSDLVSEKNGESP 225
           NTWQNVLISM+ RT  L+ E+  E P
Sbjct: 198 NTWQNVLISMRDRTEGLMLERQRELP 223

[Close]

BLAST of CmoCh18G007610 vs. TrEMBL
Match: R0HX30_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021937mg PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-47
Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 18  SKSSKRYNRSNIEYQSKLVIGNVKYFRFKSLKCIRYCDSDSNSDSSSSMIMRSQKPSGMI 77
           S    R +  N  + SKL          K+++C+R  DS  ++ +++S  +        +
Sbjct: 19  SSGPTRKSLQNPRFSSKL-----PRLCLKTIRCMR--DSSLSTPNATSPSLSFATVEAPL 78

Query: 78  PELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEV 137
               +DKL  LVSEF +L +PIDRVK+LL+YA  L+P+D+SARVS NRV GCT +VWLEV
Sbjct: 79  GTKTSDKLRILVSEFRSLTEPIDRVKRLLNYAADLAPLDDSARVSANRVTGCTTQVWLEV 138

Query: 138 KMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSR 197
           KMD+ GRMRFKADSDSEI+KGFCSCLIW+L+GA+  EV+ V+ EDL+ MN+G   K QSR
Sbjct: 139 KMDEYGRMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSR 198

Query: 198 VNTWQNVLISMQQRTSDL----VSEKNGESP 225
           VNTWQNVL+SMQ+RT  L    V+ + GE P
Sbjct: 199 VNTWQNVLMSMQKRTMTLVAADVAHRGGERP 222

[Close]

BLAST of CmoCh18G007610 vs. TAIR10
Match: AT1G67810.1 (AT1G67810.1 sulfur E2)

HSP 1 Score: 194.1 bits (492), Expect = 9.1e-50
Identity = 100/176 (56.82%), Postives = 129/176 (73.30%), Query Frame = 1


Query: 43  FRFKSLKCIR-YCDSDSNSDSSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDR 102
           F  K + C+R   +  SN  + S   + +      +    +DKL  LVSEF +L +PIDR
Sbjct: 35  FSPKPITCMRDSLNLGSNPKAPSPFSLATVSVDAPLGTKTSDKLRILVSEFRSLTEPIDR 94

Query: 103 VKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCS 162
           VK+LL+YA  L+P+DESAR+SENRV GCT +VWLE+KMD+ GRMRFKADSDSEI+KGFCS
Sbjct: 95  VKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFGRMRFKADSDSEISKGFCS 154

Query: 163 CLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVS 218
           CLIW+L+GA+  EV+ V+ EDL+ MN+G   K QSRVNTW NVL+SMQ+RT  LV+
Sbjct: 155 CLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVLMSMQKRTMTLVA 210

[Close]

BLAST of CmoCh18G007610 vs. TAIR10
Match: AT5G50210.1 (AT5G50210.1 quinolinate synthase)

HSP 1 Score: 168.7 bits (426), Expect = 4.1e-42
Identity = 93/223 (41.70%), Postives = 139/223 (62.33%), Query Frame = 1


Query: 2   SSITSFRNASPYYNCFSKSSKRYNRSNIEYQSKLVIGNVKYFRFKSLKCIRYCDSDSNSD 61
           SS++S  + +P        S  +  +++ + S+  I  +     +S KC++    D N+ 
Sbjct: 12  SSLSSLLSRTP------NPSPNFRTTHLNFGSQRRIYTINPL-LRSFKCLQSSSRDVNAS 71

Query: 62  SSSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARV 121
             S   + S   S    ELV  KL+RLV EF++L +PIDR+K +LHYA+ L  M ES++ 
Sbjct: 72  PFSISAIASSSSSSQTTELVPYKLQRLVKEFKSLTEPIDRLKWVLHYASLLPQMPESSKT 131

Query: 122 SENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIE 181
             NRV GCT  VWL+ ++  +G+MRF ADSDS+++KG CSCLI +L+ A   EV+ +K E
Sbjct: 132 ESNRVMGCTARVWLDAELGQDGKMRFCADSDSDVSKGMCSCLIQVLDEASPVEVMELKTE 191

Query: 182 DLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGESP 225
           DLA +N+G     +SRVNTW NVL+SMQ++T  LV+E+ G+ P
Sbjct: 192 DLAELNVGLLGGERSRVNTWYNVLVSMQKKTRRLVAEREGKVP 227

[Close]

BLAST of CmoCh18G007610 vs. TAIR10
Match: AT4G26500.1 (AT4G26500.1 chloroplast sulfur E)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-14
Identity = 44/144 (30.56%), Postives = 79/144 (54.86%), Query Frame = 1


Query: 79  ELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVK 138
           E +  KL+ +V  F+++++P  + ++L+ Y   L+P+D   +  EN+V GC  +VW+   
Sbjct: 81  EELPPKLQEIVKLFQSVQEPKAKYEQLMFYGKNLTPLDSQFKTRENKVEGCVSQVWVRAF 140

Query: 139 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRV 198
            D+   + ++ADSDS +TKG  + L+  L+G    E+L +  +    + L   + + SR 
Sbjct: 141 FDEERNVVYEADSDSVLTKGLAALLVKGLSGRPVPEILRITPDFAVLLGLQQSL-SPSRN 200

Query: 199 NTWQNVLISMQQRTSDLVSEKNGE 223
           N   N+L  MQ++   L  E  GE
Sbjct: 201 NGLLNMLKLMQKKALHL--EVKGE 221

[Close]

BLAST of CmoCh18G007610 vs. NCBI nr
Match: gi|359491073|ref|XP_002276849.2| (PREDICTED: quinolinate synthase, chloroplastic [Vitis vinifera])

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-49
Identity = 107/190 (56.32%), Postives = 132/190 (69.47%), Query Frame = 1


Query: 45  FKSLKCIRYCDSDSNSDSSSSMIMRSQKPS------------GMIPELVADKLERLVSEF 104
           FKS++CI+    DS   S S +   S+ P                 EL + KL RL+SEF
Sbjct: 48  FKSIRCIQSPPPDSAPSSQSPLKPNSRSPGFSFSCSAVSFSPSRTSELASCKLGRLISEF 107

Query: 105 EALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSD 164
             LE+P+DRVK+LLHYA+ L P++ESARV+ NRV GCT +VWLEVKMD  GRMRF ADSD
Sbjct: 108 RTLEEPVDRVKRLLHYASVLPPLEESARVAGNRVMGCTAQVWLEVKMDGEGRMRFAADSD 167

Query: 165 SEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRT 223
           SEITKGFCSCLIW+L+GA   EVLA+K +DLAA+N+G P    SRVNTW NVLI M +RT
Sbjct: 168 SEITKGFCSCLIWVLDGAAPEEVLALKTDDLAALNVGLPGAGHSRVNTWHNVLIVMHKRT 227

[Close]

BLAST of CmoCh18G007610 vs. NCBI nr
Match: gi|747050189|ref|XP_011071158.1| (PREDICTED: sufE-like protein 2, chloroplastic [Sesamum indicum])

HSP 1 Score: 200.7 bits (509), Expect = 2.7e-48
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = 1


Query: 63  SSSMIMRSQKPSGMIPELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVS 122
           S S +  +Q P   IP  V++K++ L  EF++L +PIDRVK+LLHYA  L P DES R  
Sbjct: 122 SLSCLTINQHPVAQIPS-VSEKVQNLDFEFKSLPEPIDRVKRLLHYAALLPPFDESLRTQ 181

Query: 123 ENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIED 182
           ENRV GCT +VWLEVKMD NG MRF+ DSDSEITKGF SCL+W+L+GAEA EVL+VKI+D
Sbjct: 182 ENRVFGCTAQVWLEVKMDGNGAMRFRVDSDSEITKGFSSCLVWLLDGAEAEEVLSVKIDD 241

Query: 183 LAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKN 221
           L  MN+G P +  SRVNTW NVLISMQ+RT DLV E++
Sbjct: 242 LVEMNVGLPSRGNSRVNTWHNVLISMQRRTKDLVEERS 278

[Close]

BLAST of CmoCh18G007610 vs. NCBI nr
Match: gi|566206811|ref|XP_002322206.2| (quinolinate synthetase A-related family protein [Populus trichocarpa])

HSP 1 Score: 199.9 bits (507), Expect = 4.7e-48
Identity = 100/179 (55.87%), Postives = 131/179 (73.18%), Query Frame = 1


Query: 45  FKSLKCIRYCDSDSNSDSSSSMIMRSQKPS-GMIPELVADKLERLVSEFEALEKPIDRVK 104
           FKS+KCI     +    +SS  I  +   S   I ELV  KL  L++EF++L +P+DRVK
Sbjct: 44  FKSVKCIHSPPPNPKPSNSSPFICTAVTFSPSQITELVPSKLHHLITEFQSLSQPVDRVK 103

Query: 105 KLLHYATFLSPMDESARVSENRVAGCTVEVWLEVKMDDNGRMRFKADSDSEITKGFCSCL 164
           +LLHYATFLSP+ +S RV  NRV GCT +VWLE ++D  G+MRF ADSDSEIT+GFC+CL
Sbjct: 104 RLLHYATFLSPLPDSYRVDSNRVMGCTAQVWLEAQLDQYGKMRFWADSDSEITRGFCACL 163

Query: 165 IWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRVNTWQNVLISMQQRTSDLVSEKNGE 223
           IW+L+GA   EVL V  EDL A+N+G P+ A+SRVNTW NVL+SMQ+R   LV+E++G+
Sbjct: 164 IWVLDGAVPEEVLKVTTEDLTALNVGLPVGARSRVNTWHNVLVSMQKRARMLVAERDGK 222

[Close]

BLAST of CmoCh18G007610 vs. NCBI nr
Match: gi|645230335|ref|XP_008221890.1| (PREDICTED: sufE-like protein 2, chloroplastic isoform X1 [Prunus mume])

HSP 1 Score: 199.5 bits (506), Expect = 6.1e-48
Identity = 109/204 (53.43%), Postives = 144/204 (70.59%), Query Frame = 1


Query: 20  SSKRYNRSNIEYQSKL-VIGNVKYFRFKSLKCIRYCDSDSNSDSSSSMIMRSQKPSGMIP 79
           SSKR   +    Q KL    N + F  KS+KCI+      N  + +S +  ++ P   + 
Sbjct: 24  SSKRQAHNPRHVQLKLDKRQNGRNFLSKSIKCIQN-RGIRNPTALASCLAATEAPPSKVA 83

Query: 80  ELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVK 139
           ELVADKL+RLV EF++L +PIDRVK+LLHYA  L P +ES R  E+RV GC+ +VW+E +
Sbjct: 84  ELVADKLKRLVLEFKSLAEPIDRVKRLLHYAAGLPPYNESTRKPESRVPGCSTQVWVEAE 143

Query: 140 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRV 199
           MD+ GRMRF+ADSDSEI+KGFCSCLIWML+GAEA+EVL VK  DL  +N+G   K  SRV
Sbjct: 144 MDELGRMRFRADSDSEISKGFCSCLIWMLDGAEAAEVLEVKTRDLEDVNVGVYGKVNSRV 203

Query: 200 NTWQNVLISMQQRTSDLVSEKNGE 223
           NTW NVL++MQ++T  LV+E+ G+
Sbjct: 204 NTWHNVLLAMQRKTEALVAEREGK 226

[Close]

BLAST of CmoCh18G007610 vs. NCBI nr
Match: gi|645230340|ref|XP_008221892.1| (PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Prunus mume])

HSP 1 Score: 199.5 bits (506), Expect = 6.1e-48
Identity = 109/204 (53.43%), Postives = 144/204 (70.59%), Query Frame = 1


Query: 20  SSKRYNRSNIEYQSKL-VIGNVKYFRFKSLKCIRYCDSDSNSDSSSSMIMRSQKPSGMIP 79
           SSKR   +    Q KL    N + F  KS+KCI+      N  + +S +  ++ P   + 
Sbjct: 24  SSKRQAHNPRHVQLKLDKRQNGRNFLSKSIKCIQN-RGIRNPTALASCLAATEAPPSKVA 83

Query: 80  ELVADKLERLVSEFEALEKPIDRVKKLLHYATFLSPMDESARVSENRVAGCTVEVWLEVK 139
           ELVADKL+RLV EF++L +PIDRVK+LLHYA  L P +ES R  E+RV GC+ +VW+E +
Sbjct: 84  ELVADKLKRLVLEFKSLAEPIDRVKRLLHYAAGLPPYNESTRKPESRVPGCSTQVWVEAE 143

Query: 140 MDDNGRMRFKADSDSEITKGFCSCLIWMLNGAEASEVLAVKIEDLAAMNLGSPIKAQSRV 199
           MD+ GRMRF+ADSDSEI+KGFCSCLIWML+GAEA+EVL VK  DL  +N+G   K  SRV
Sbjct: 144 MDELGRMRFRADSDSEISKGFCSCLIWMLDGAEAAEVLEVKTRDLEDVNVGVYGKVNSRV 203

Query: 200 NTWQNVLISMQQRTSDLVSEKNGE 223
           NTW NVL++MQ++T  LV+E+ G+
Sbjct: 204 NTWHNVLLAMQRKTEALVAEREGK 226

The following BLAST results are available for this feature:

BLAST of CmoCh18G007610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SUFE2_ARATH	1.6e-48	56.82	SufE-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=SUFE2 PE=2 SV=1	[more]
NADA_ARATH	7.2e-41	41.70	Quinolinate synthase, chloroplastic OS=Arabidopsis thaliana GN=QS PE=1 SV=1	[more]
NADA_ORYSJ	9.5e-25	43.17	Quinolinate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os12g0290...	[more]
SUFE1_ARATH	2.9e-13	30.56	SufE-like protein 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SUFE...	[more]
Y1419_SYNY3	4.6e-11	29.92	Uncharacterized SufE-like protein slr1419 OS=Synechocystis sp. (strain PCC 6803 ...	[more]

BLAST of CmoCh18G007610 vs. TrEMBL


Match Name	E-value	Identity	Description
B9IF02_POPTR	3.3e-48	55.87	Quinolinate synthetase A-related family protein OS=Populus trichocarpa GN=POPTR_...	[more]
A0A140B478_PRUPE	1.6e-47	55.32	NFS2 activator 4 OS=Prunus persica var. persica GN=SUFE3 PE=2 SV=1	[more]
M5WG82_PRUPE	1.6e-47	55.32	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001921mg PE=4 SV=1	[more]
A0A061E8L8_THECC	3.6e-47	63.01	Sulfur E2 OS=Theobroma cacao GN=TCM_010587 PE=4 SV=1	[more]
R0HX30_9BRAS	4.7e-47	51.66	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021937mg PE=4 SV=1	[more]

BLAST of CmoCh18G007610 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67810.1	9.1e-50	56.82	sulfur E2	[more]
AT5G50210.1	4.1e-42	41.70	quinolinate synthase	[more]
AT4G26500.1	1.6e-14	30.56	chloroplast sulfur E	[more]

BLAST of CmoCh18G007610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|359491073\|ref\|XP_002276849.2\|	1.9e-49	56.32	PREDICTED: quinolinate synthase, chloroplastic [Vitis vinifera]	[more]
gi\|747050189\|ref\|XP_011071158.1\|	2.7e-48	62.66	PREDICTED: sufE-like protein 2, chloroplastic [Sesamum indicum]	[more]
gi\|566206811\|ref\|XP_002322206.2\|	4.7e-48	55.87	quinolinate synthetase A-related family protein [Populus trichocarpa]	[more]
gi\|645230335\|ref\|XP_008221890.1\|	6.1e-48	53.43	PREDICTED: sufE-like protein 2, chloroplastic isoform X1 [Prunus mume]	[more]
gi\|645230340\|ref\|XP_008221892.1\|	6.1e-48	53.43	PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003808	Fe-S_metab-assoc_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0051176	positive regulation of sulfur metabolic process
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0072525	pyridine-containing compound biosynthetic process
biological_process	GO:0044711	single-organism biosynthetic process
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008047	enzyme activator activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh18G007610.1	CmoCh18G007610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003808	Fe-S metabolism associated domain, SufE-like	PFAM	PF02657	SufE	coord: 90..210 score: 3.6
None	No IPR available	GENE3D	G3DSA:3.90.1010.10		coord: 81..220 score: 7.1
None	No IPR available	PANTHER	PTHR30573	QUINOLINATE SYNTHETASE A	coord: 136..224 score: 1.1
None	No IPR available	PANTHER	PTHR30573:SF3	QUINOLINATE SYNTHASE, CHLOROPLASTIC	coord: 136..224 score: 1.1
None	No IPR available	unknown	SSF82649	SufE/NifU	coord: 83..217 score: 4.81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh18G007610	Cucsa.394570	Cucumber (Gy14) v1	cgycmoB1088
CmoCh18G007610	CmaCh12G000380	Cucurbita maxima (Rimu)	cmacmoB180
CmoCh18G007610	CmaCh18G007570	Cucurbita maxima (Rimu)	cmacmoB406
CmoCh18G007610	Cla010033	Watermelon (97103) v1	cmowmB367
CmoCh18G007610	Csa2G349630	Cucumber (Chinese Long) v2	cmocuB396
CmoCh18G007610	MELO3C010697	Melon (DHL92) v3.5.1	cmomeB364
CmoCh18G007610	ClCG05G025860	Watermelon (Charleston Gray)	cmowcgB360
CmoCh18G007610	ClCG08G017640	Watermelon (Charleston Gray)	cmowcgB370
CmoCh18G007610	CSPI02G17390	Wild cucumber (PI 183967)	cmocpiB399
CmoCh18G007610	CSPI01G08900	Wild cucumber (PI 183967)	cmocpiB398
CmoCh18G007610	Lsi04G006030	Bottle gourd (USVL1VR-Ls)	cmolsiB368
CmoCh18G007610	Lsi08G016380	Bottle gourd (USVL1VR-Ls)	cmolsiB379
CmoCh18G007610	Cp4.1LG09g05410	Cucurbita pepo (Zucchini)	cmocpeB376
CmoCh18G007610	MELO3C002307.2	Melon (DHL92) v3.6.1	cmomedB407
CmoCh18G007610	MELO3C010697.2	Melon (DHL92) v3.6.1	cmomedB417
CmoCh18G007610	CsaV3_2G025000	Cucumber (Chinese Long) v3	cmocucB0474
CmoCh18G007610	Cla97C08G161340	Watermelon (97103) v2	cmowmbB415
CmoCh18G007610	Cla97C05G108090	Watermelon (97103) v2	cmowmbB406
CmoCh18G007610	Bhi07G001445	Wax gourd	cmowgoB0539
CmoCh18G007610	Bhi04G000581	Wax gourd	cmowgoB0510
CmoCh18G007610	CsGy2G017370	Cucumber (Gy14) v2	cgybcmoB191
CmoCh18G007610	Carg20488	Silver-seed gourd	carcmoB0857
CmoCh18G007610	Carg14508	Silver-seed gourd	carcmoB0984

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh18G007610	Cucumber (Gy14) v2	cgybcmoB600
CmoCh18G007610	Melon (DHL92) v3.6.1	cmomedB398
CmoCh18G007610	Silver-seed gourd	carcmoB0341
CmoCh18G007610	Cucumber (Chinese Long) v3	cmocucB0484
CmoCh18G007610	Cucurbita moschata (Rifu)	cmocmoB341
CmoCh18G007610	Cucurbita moschata (Rifu)	cmocmoB347
CmoCh18G007610	Cucumber (Gy14) v1	cgycmoB0790
CmoCh18G007610	Cucurbita maxima (Rimu)	cmacmoB710
CmoCh18G007610	Cucurbita maxima (Rimu)	cmacmoB777
CmoCh18G007610	Wild cucumber (PI 183967)	cmocpiB407
CmoCh18G007610	Cucumber (Chinese Long) v2	cmocuB402
CmoCh18G007610	Melon (DHL92) v3.5.1	cmomeB347
CmoCh18G007610	Cucurbita pepo (Zucchini)	cmocpeB381
CmoCh18G007610	Cucurbita pepo (Zucchini)	cmocpeB396