Cp4.1LG09g02290 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGGTACGATGCTGAGTATGGTAACACTAGATTTGCTTTTTGACTCCATTCCAACATTTCTCCTTTATTCACCTTCTTCTTAATCATTTCAAAAACCCTAACCCTAACAACACTCTGCCCCACTCTCTCAAACCCTTCCTCCCCCAATTTTCCTCTTCACCTTCTTCTTCTTCCCTTCCCTTTCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTAAAACCCTCTTGATTTTACTGAATTCTACGTCCAAAATTATTACTCTCCTATTTTTTTGTTCATGAAACGACAGTTCATATGATTCCTTTCATACCCTTTTGATCATAATTGATTGTAATGGTAAAAACAAGGTTGATTTGTGGACTAAGAATAGTAAATTTCTTTCTGTCCTTAACTTCTCCGAATTGACAGCTAAAATTCACGTTTAGATTGTTTTGTGTTGGGAATTTAACGTTGAATTTGGGTAAATTTGTTCGGATTCTTTGACGTTTTTTTTTTTGTTTGTTTTTTGTTGGATTTGGTAGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGGTGAATTTTGTAATAATTACAGTGACAGTGAATTTATAAGGTTTTTTTTTCAATGGCTAAAAGATTATTTTTTGAAACTAGCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAGTCCCCTTCTGCAAATTTTGTTGTGAAACGTATGTTTGTACTGTTCTATTACGATAGAGAATTAATGTGAGATCCCACATTTATTGGAGAGAGGAACGAAGCATTTATTATATTAAGAATGTGGAAATCTCTCCATAGTAGTAGACGCTTTTTGAAATCTTGAGAGGAAGTTTGGAAGGGAAAACCTAAAGAGGACAATGTCTGCTAGCAGTGAGCTTGGGCTGTTACAAATGGGTATTAGAGCCAAACACTGGGCGGTGTGCCAGCGAGAACACTGGGCCATAAAGGGATGGATTGTGAGGTCCCATATCAGTTGGAGAGGGGGACGAAGCATTCCTTGTATGGGTGTGGAAACCTCTCTCTAATAGATGCCTTTCACAGCCTCCGGGAAAAGTACAAATATGACAATATTTGCTAGCGGTGGGCTTAAGTTATTACAAACGATATCATAGCTAAACACTGGGTGGTGTGCTAGCAAGAACGTTGGGCCTCCAAGGGGGGTGAATTATGAGATGCTACATCGGTTGGAGAGAGGAACGAATCATTCCTTACACGGGTGTGGAAACCTCTCCCTAATCCCTAATAGACGTGTTTTAAAACTTGGAGGGGAAGCACAAAAACGACAATATCTACTAGCGATGAGTTTAGACTGTTCAAATTAAATTTACCGTACCTCTGATTTGCATGTTTTTGCAGCACCTGAGAAGAAACACAGGCTGCCATCTGCATACAATCGTTTCATGAAGTAAGAAAAGTTATTTAATTAATCAAAAAAGTCAGAAATTTTACCACTTTTTTTAAAAAAAACTTGAAACTTTACCATATGGGTTTGTTAGAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACGTAATCAAACCCTTTTTTTGTTGCATTTTTCTTACATTTGAATCATATTAACTGCTTGAATTAATGTTGTCACGACAGTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGTAAGAAAACGTTGTTAATTTAACTGTTTTAGCTGTGTCTGAGACTTATGGTTCTTAGGGTTGTCGATTTTGCAGGAATGAAAAGGGTTTAGGGCAAATCAAGTGGATGTCTAGGGTTTCATAAAGTTTAAGATTGGCCATGTTTGTGTCTCGATGTCTTCTCCAATTTCATGTCTTGATTAGTGTTGTGTTTTTTTTTTTTCATTAATGTACTTTGTTGGCTGTGGATTAACAGCTATAAGAGTTGTAATTTCTGATATCATGATCAATGCTAATATTTTCGATCGGACTTCGAGAATTTTTTTTCGTGTTGAATATGTGGAGAGTGACGATTCAAATATCTAGCTTTTTAGTTGAAGGTGTATGCCTAAATCAATTGAGTTATGCTCGTGTTATTGACAATGAGACATGTATGAATTGATAGTATAAAACATATATTGCATTTGTCGAG GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGAATGAAAAGGGTTTAGGGCAAATCAAGTGGATGTCTAGGGTTTCATAAAGTTTAAGATTGGCCATGTTTGTGTCTCGATGTCTTCTCCAATTTCATGTCTTGATTAGTGTTGTGTTTTTTTTTTTTCATTAATGTACTTTGTTGGCTGTGGATTAACAGCTATAAGAGTTGTAATTTCTGATATCATGATCAATGCTAATATTTTCGATCGGACTTCGAGAATTTTTTTTCGTGTTGAATATGTGGAGAGTGACGATTCAAATATCTAGCTTTTTAGTTGAAGGTGTATGCCTAAATCAATTGAGTTATGCTCGTGTTATTGACAATGAGACATGTATGAATTGATAGTATAAAACATATATTGCATTTGTCGAG GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGAATGA GLSGGGDGSAKVQCRQQHLMSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSSMANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: CRC_ARATH (Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2) HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36 Identity = 89/173 (51.45%), Postives = 110/173 (63.58%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YABDL_ORYSJ (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.9e-32 Identity = 81/165 (49.09%), Postives = 99/165 (60.00%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 6.4e-18 Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 69/181 (38.12%), Postives = 87/181 (48.07%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A0A0KQW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606780 PE=4 SV=1) HSP 1 Score: 238.8 bits (608), Expect = 4.7e-60 Identity = 127/173 (73.41%), Postives = 138/173 (79.77%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A067KYR0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15738 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.2e-53 Identity = 114/179 (63.69%), Postives = 132/179 (73.74%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: B9REB6_RICCO (Protein CRABS CLAW, putative OS=Ricinus communis GN=RCOM_1620070 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 8.8e-51 Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A059D6Y4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.8e-49 Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A059D7D2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 2.8e-49 Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT1G69180.1 (AT1G69180.1 Plant-specific transcription factor YABBY family protein) HSP 1 Score: 152.5 bits (384), Expect = 2.2e-37 Identity = 89/173 (51.45%), Postives = 110/173 (63.58%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT2G26580.1 (AT2G26580.1 plant-specific transcription factor YABBY family protein) HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20 Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT1G08465.1 (AT1G08465.1 Plant-specific transcription factor YABBY family protein) HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18 Identity = 58/152 (38.16%), Postives = 75/152 (49.34%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT2G45190.1 (AT2G45190.1 Plant-specific transcription factor YABBY family protein) HSP 1 Score: 87.4 bits (215), Expect = 8.8e-18 Identity = 60/168 (35.71%), Postives = 76/168 (45.24%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT4G00180.1 (AT4G00180.1 Plant-specific transcription factor YABBY family protein) HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16 Identity = 66/178 (37.08%), Postives = 81/178 (45.51%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|659091256|ref|XP_008446454.1| (PREDICTED: protein CRABS CLAW [Cucumis melo]) HSP 1 Score: 238.8 bits (608), Expect = 6.7e-60 Identity = 127/173 (73.41%), Postives = 138/173 (79.77%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|802568623|ref|XP_012067815.1| (PREDICTED: protein CRABS CLAW isoform X1 [Jatropha curcas]) HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54 Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|802568654|ref|XP_012067816.1| (PREDICTED: protein CRABS CLAW isoform X2 [Jatropha curcas]) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53 Identity = 114/171 (66.67%), Postives = 131/171 (76.61%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|643734661|gb|KDP41331.1| (hypothetical protein JCGZ_15738 [Jatropha curcas]) HSP 1 Score: 215.7 bits (548), Expect = 6.1e-53 Identity = 114/179 (63.69%), Postives = 132/179 (73.74%), Query Frame = 1
BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|225423420|ref|XP_002263611.1| (PREDICTED: protein CRABS CLAW isoform X2 [Vitis vinifera]) HSP 1 Score: 208.4 bits (529), Expect = 9.7e-51 Identity = 111/171 (64.91%), Postives = 125/171 (73.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |