Cp4.1LG09g02290 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG09g02290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein CRABS CLAW, putative
LocationCp4.1LG09 : 1313947 .. 1316378 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGGTACGATGCTGAGTATGGTAACACTAGATTTGCTTTTTGACTCCATTCCAACATTTCTCCTTTATTCACCTTCTTCTTAATCATTTCAAAAACCCTAACCCTAACAACACTCTGCCCCACTCTCTCAAACCCTTCCTCCCCCAATTTTCCTCTTCACCTTCTTCTTCTTCCCTTCCCTTTCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTAAAACCCTCTTGATTTTACTGAATTCTACGTCCAAAATTATTACTCTCCTATTTTTTTGTTCATGAAACGACAGTTCATATGATTCCTTTCATACCCTTTTGATCATAATTGATTGTAATGGTAAAAACAAGGTTGATTTGTGGACTAAGAATAGTAAATTTCTTTCTGTCCTTAACTTCTCCGAATTGACAGCTAAAATTCACGTTTAGATTGTTTTGTGTTGGGAATTTAACGTTGAATTTGGGTAAATTTGTTCGGATTCTTTGACGTTTTTTTTTTTGTTTGTTTTTTGTTGGATTTGGTAGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGGTGAATTTTGTAATAATTACAGTGACAGTGAATTTATAAGGTTTTTTTTTCAATGGCTAAAAGATTATTTTTTGAAACTAGCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAGTCCCCTTCTGCAAATTTTGTTGTGAAACGTATGTTTGTACTGTTCTATTACGATAGAGAATTAATGTGAGATCCCACATTTATTGGAGAGAGGAACGAAGCATTTATTATATTAAGAATGTGGAAATCTCTCCATAGTAGTAGACGCTTTTTGAAATCTTGAGAGGAAGTTTGGAAGGGAAAACCTAAAGAGGACAATGTCTGCTAGCAGTGAGCTTGGGCTGTTACAAATGGGTATTAGAGCCAAACACTGGGCGGTGTGCCAGCGAGAACACTGGGCCATAAAGGGATGGATTGTGAGGTCCCATATCAGTTGGAGAGGGGGACGAAGCATTCCTTGTATGGGTGTGGAAACCTCTCTCTAATAGATGCCTTTCACAGCCTCCGGGAAAAGTACAAATATGACAATATTTGCTAGCGGTGGGCTTAAGTTATTACAAACGATATCATAGCTAAACACTGGGTGGTGTGCTAGCAAGAACGTTGGGCCTCCAAGGGGGGTGAATTATGAGATGCTACATCGGTTGGAGAGAGGAACGAATCATTCCTTACACGGGTGTGGAAACCTCTCCCTAATCCCTAATAGACGTGTTTTAAAACTTGGAGGGGAAGCACAAAAACGACAATATCTACTAGCGATGAGTTTAGACTGTTCAAATTAAATTTACCGTACCTCTGATTTGCATGTTTTTGCAGCACCTGAGAAGAAACACAGGCTGCCATCTGCATACAATCGTTTCATGAAGTAAGAAAAGTTATTTAATTAATCAAAAAAGTCAGAAATTTTACCACTTTTTTTAAAAAAAACTTGAAACTTTACCATATGGGTTTGTTAGAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACGTAATCAAACCCTTTTTTTGTTGCATTTTTCTTACATTTGAATCATATTAACTGCTTGAATTAATGTTGTCACGACAGTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGTAAGAAAACGTTGTTAATTTAACTGTTTTAGCTGTGTCTGAGACTTATGGTTCTTAGGGTTGTCGATTTTGCAGGAATGAAAAGGGTTTAGGGCAAATCAAGTGGATGTCTAGGGTTTCATAAAGTTTAAGATTGGCCATGTTTGTGTCTCGATGTCTTCTCCAATTTCATGTCTTGATTAGTGTTGTGTTTTTTTTTTTTCATTAATGTACTTTGTTGGCTGTGGATTAACAGCTATAAGAGTTGTAATTTCTGATATCATGATCAATGCTAATATTTTCGATCGGACTTCGAGAATTTTTTTTCGTGTTGAATATGTGGAGAGTGACGATTCAAATATCTAGCTTTTTAGTTGAAGGTGTATGCCTAAATCAATTGAGTTATGCTCGTGTTATTGACAATGAGACATGTATGAATTGATAGTATAAAACATATATTGCATTTGTCGAG

mRNA sequence

GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGAATGAAAAGGGTTTAGGGCAAATCAAGTGGATGTCTAGGGTTTCATAAAGTTTAAGATTGGCCATGTTTGTGTCTCGATGTCTTCTCCAATTTCATGTCTTGATTAGTGTTGTGTTTTTTTTTTTTCATTAATGTACTTTGTTGGCTGTGGATTAACAGCTATAAGAGTTGTAATTTCTGATATCATGATCAATGCTAATATTTTCGATCGGACTTCGAGAATTTTTTTTCGTGTTGAATATGTGGAGAGTGACGATTCAAATATCTAGCTTTTTAGTTGAAGGTGTATGCCTAAATCAATTGAGTTATGCTCGTGTTATTGACAATGAGACATGTATGAATTGATAGTATAAAACATATATTGCATTTGTCGAG

Coding sequence (CDS)

GGTTTGTCTGGTGGAGGTGATGGGTCTGCAAAAGTGCAGTGCAGACAACAACACTTAATGAGCTCCGAAGACAAATCTTCCATGGATTTGGTCCAACCTTCTGACCATCTCTGCTATGTCAAATGCAACTTTTGCAACACTGTTCTTGCGGTTGGAATTCCATGCAGACGTTTGTTGGATACAGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCCTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGTATTGATCATCCTCTCAGTTTTCAGTCTCAGGTTGGCTTCTCCACTGATATCCGAAAGGGGGCATCGACATCGTCATCGTCATCGTCGTCTTCAATGGCTAATGAAGAGGAGATTCAACGAATCAAAGCTGCCAACCCAGAAATCCCACATCGAGAAGCATTCAGTGCAGCAGCCAAGAACTGGGCTCGATACATTCCAAATTCAGCTGATGGGTCGGCTTCTGGGACTCACGACAATGAATGA

Protein sequence

GLSGGGDGSAKVQCRQQHLMSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSSMANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE
BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: CRC_ARATH (Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-36
Identity = 89/173 (51.45%), Postives = 110/173 (63.58%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPS---DHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLS 79
           M+ E+K +M   + S   +HL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+
Sbjct: 1   MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT 60

Query: 80  TRPPLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS-------------------- 139
           T PPLQG      L+ Q Q    +D +KG+S+SSSSS+SS                    
Sbjct: 61  TTPPLQGHV---SLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQR 120

Query: 140 ------MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHD 164
                     +EIQRIK+ANPEIPHREAFSAAAKNWA+YIPNS     SG H+
Sbjct: 121 LPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN 170

BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YABDL_ORYSJ (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.9e-32
Identity = 81/165 (49.09%), Postives = 99/165 (60.00%), Query Frame = 1

Query: 28  MDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQC-- 87
           MDLV PS+HLCYV+C +CNTVLAVG+PC+RL+DTVTVKCGHC+NLSFLS RPP+      
Sbjct: 1   MDLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSP 60

Query: 88  IDHPLS-FQSQVGFSTDIRKGASTSSSSSSSSMAN------------------------E 147
            DHPL  FQ   G  TD R+       S +S+  +                         
Sbjct: 61  TDHPLGPFQ---GPCTDCRRNQPLPLVSPTSNEGSPRAPFVVKPPEKKHRLPSAYNRFMR 120

Query: 148 EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
           EEIQRIKAA P+IPHREAFS AAKNWA+  P  +   ++   + E
Sbjct: 121 EEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSSTVSTSNSNPE 162

BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1

Query: 31  VQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQG------Q 90
           V  ++ LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ       Q
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ 64

Query: 91  CIDHPL-SFQSQVGFSTDIRKGASTSSSS----------------SSSSMANEEEIQRIK 150
             ++ +  + S     T I    ST + +                S+ +   +EEIQRIK
Sbjct: 65  ATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIK 124

BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-18
Identity = 62/168 (36.90%), Postives = 89/168 (52.98%), Query Frame = 1

Query: 27  SMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR-------- 86
           S  +V   +H+CYV CNFCNT+ AV +P   +L+ VTV+CGHC++L  ++ R        
Sbjct: 2   SAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPA 61

Query: 87  -PPLQGQCIDHPLSFQ---SQVGFSTDIRKGASTSSSSSSSSMAN--------------- 146
              LQ     H +SF+   S+ G S+   +     S + +  M +               
Sbjct: 62  EDHLQDNLKMHNMSFRENYSEYGSSSRYGRVPMMFSKNDTEHMLHVRPPEKRQRVPSAYN 121

Query: 147 ---EEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 165
              +EEI+RIKA NP+I HREAFS AAKNWA + PN   G   G+H++
Sbjct: 122 RFIKEEIRRIKANNPDISHREAFSTAAKNWAHF-PNIHFG--LGSHES 166

BLAST of Cp4.1LG09g02290 vs. Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17
Identity = 69/181 (38.12%), Postives = 87/181 (48.07%), Query Frame = 1

Query: 31  VQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR------PPLQGQ 90
           + P++ +CYV CNFCNT+LAV +P   +L+ VTV+CGHC+NL  ++ R      P LQ  
Sbjct: 5   IAPAEQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQ-- 64

Query: 91  CIDHPLSFQSQVGFSTDIRK-------GASTSSSSS------------SSSMANE----- 150
             DH      + G S   R        G S +SSSS            S S  N+     
Sbjct: 65  --DHHHHHLQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQA 124

Query: 151 ---------------------EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSAS 161
                                EEI+RIKA NP+I HREAFS AAKNWA Y PN   G + 
Sbjct: 125 LHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHY-PNIHFGLSP 180

BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A0A0KQW3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606780 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 4.7e-60
Identity = 127/173 (73.41%), Postives = 138/173 (79.77%), Query Frame = 1

Query: 19  LMSSEDKSSM-DLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLST 78
           + +SEDKSSM DLVQPS+H CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 79  RPPLQGQCIDHPLSFQSQVGFSTD--IRKGASTSSSSSSSSMANE--------------- 138
           RPPLQGQCIDHPL+FQSQVGFS +  IRKGASTSS+S++SS+ N+               
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 139 ---------EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 165
                    EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSA GS SGTH+N
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173

BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A067KYR0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15738 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-53
Identity = 114/179 (63.69%), Postives = 132/179 (73.74%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K +MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNLEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQ--------SQVGFSTDIRKGASTSSSSSSSS--------------- 139
           PLQGQC+DHPL+ Q         + GF +D+RKG S+SSSSS+SS               
Sbjct: 61  PLQGQCLDHPLTLQVLIYVCTKKKQGFFSDLRKGQSSSSSSSTSSEPLSPKAPFVVKPPE 120

Query: 140 ----------MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
                        +EEIQRIKAANPEIPHREAFS AAKNWARYIPNSA GS SG+++N+
Sbjct: 121 KKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYIPNSAGGSVSGSNNND 179

BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: B9REB6_RICCO (Protein CRABS CLAW, putative OS=Ricinus communis GN=RCOM_1620070 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 8.8e-51
Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K +MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNLEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS----------------------- 139
           PLQGQC+DH L+ QS   F +D++KG S+SSSSS+SS                       
Sbjct: 61  PLQGQCLDHQLTLQS---FFSDLKKGQSSSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSA 120

Query: 140 --MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 165
                +EEIQRIKAANPEIPHREAFS AAKNWARYIPNS  GS SG+  N
Sbjct: 121 YNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYIPNSTAGSVSGSSCN 167

BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A059D6Y4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-49
Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 1

Query: 23  EDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQ 82
           EDK+SM+   PS+HLCYV+CNFCNTVLAVGIPC+R+LDTVTVKCGHCSNLSFLSTR PLQ
Sbjct: 2   EDKASME-APPSEHLCYVRCNFCNTVLAVGIPCKRMLDTVTVKCGHCSNLSFLSTRTPLQ 61

Query: 83  GQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSS--------------------------- 142
           GQC+DHPLS Q   GFS+D R+G S+SSSSS+S                           
Sbjct: 62  GQCLDHPLSLQQ--GFSSDFRRGQSSSSSSSTSGDQPLSPKAAPFVVKPPEKKHRLPSAY 121

Query: 143 SMANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
           +   +EEIQRIKAANPEIPHREAFSAAAKNWARYIP+S  GSA G+  +E
Sbjct: 122 NRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPHSPSGSAPGSSSHE 168

BLAST of Cp4.1LG09g02290 vs. TrEMBL
Match: A0A059D7D2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-49
Identity = 109/170 (64.12%), Postives = 125/170 (73.53%), Query Frame = 1

Query: 23  EDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQ 82
           EDK+SM+   PS+HLCYV+CNFCNTVLAVGIPC+R+LDTVTVKCGHCSNLSFLSTR PLQ
Sbjct: 2   EDKASME-APPSEHLCYVRCNFCNTVLAVGIPCKRMLDTVTVKCGHCSNLSFLSTRTPLQ 61

Query: 83  GQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSS--------------------------- 142
           GQC+DHPLS Q   GFS+D R+G S+SSSSS+S                           
Sbjct: 62  GQCLDHPLSLQ---GFSSDFRRGQSSSSSSSTSGDQPLSPKAAPFVVKPPEKKHRLPSAY 121

Query: 143 SMANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
           +   +EEIQRIKAANPEIPHREAFSAAAKNWARYIP+S  GSA G+  +E
Sbjct: 122 NRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPHSPSGSAPGSSSHE 167

BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT1G69180.1 (AT1G69180.1 Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 152.5 bits (384), Expect = 2.2e-37
Identity = 89/173 (51.45%), Postives = 110/173 (63.58%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPS---DHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLS 79
           M+ E+K +M   + S   +HL YV+C+ CNT+LAVGIP +R+LDTVTVKCGHC NLSFL+
Sbjct: 1   MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT 60

Query: 80  TRPPLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS-------------------- 139
           T PPLQG      L+ Q Q    +D +KG+S+SSSSS+SS                    
Sbjct: 61  TTPPLQGHV---SLTLQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQR 120

Query: 140 ------MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHD 164
                     +EIQRIK+ANPEIPHREAFSAAAKNWA+YIPNS     SG H+
Sbjct: 121 LPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN 170

BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT2G26580.1 (AT2G26580.1 plant-specific transcription factor YABBY family protein)

HSP 1 Score: 94.4 bits (233), Expect = 7.2e-20
Identity = 57/142 (40.14%), Postives = 77/142 (54.23%), Query Frame = 1

Query: 31  VQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQG------Q 90
           V  ++ LCY+ CNFCN +LAV +PC  L D VTV+CGHC+NL  ++    LQ       Q
Sbjct: 5   VMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQ 64

Query: 91  CIDHPL-SFQSQVGFSTDIRKGASTSSSS----------------SSSSMANEEEIQRIK 150
             ++ +  + S     T I    ST + +                S+ +   +EEIQRIK
Sbjct: 65  ATNYAVPEYGSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQFIKEEIQRIK 124

BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT1G08465.1 (AT1G08465.1 Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 89.7 bits (221), Expect = 1.8e-18
Identity = 58/152 (38.16%), Postives = 75/152 (49.34%), Query Frame = 1

Query: 34  SDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFL--------STRPPLQGQC 93
           S+ +CYV C+FC T+LAV +P   L   VTV+CGHC+NL  L        ++ PP+    
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 94  IDHPLSFQSQVGFSTDIRKGASTSSSSSSSSMAN-------------------------- 150
             H     S V      RK  ++SS S+++   N                          
Sbjct: 67  QPHRQHTTSLV-----TRKDCASSSRSTNNLSENIDREAPRMPPIRPPEKRQRVPSAYNR 126

BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT2G45190.1 (AT2G45190.1 Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 87.4 bits (215), Expect = 8.8e-18
Identity = 60/168 (35.71%), Postives = 76/168 (45.24%), Query Frame = 1

Query: 27  SMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRPPLQGQCI 86
           S D   PSDHLCYV+CNFC T+LAV +P   L  TVTV+CG C+NL  ++ R  +     
Sbjct: 15  SPDHFSPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASN 74

Query: 87  DHPLSFQSQVGFS-TDIRKGASTSSSSSSSSMANEE------------------------ 146
              L       F+  DI +    + S+ +  M N+                         
Sbjct: 75  QLQLQLGPHSYFNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPV 134

Query: 147 --------------------EIQRIKAANPEIPHREAFSAAAKNWARY 150
                               EIQRIKA NP+I HREAFSAAAKNWA +
Sbjct: 135 NRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 182

BLAST of Cp4.1LG09g02290 vs. TAIR10
Match: AT4G00180.1 (AT4G00180.1 Plant-specific transcription factor YABBY family protein)

HSP 1 Score: 83.2 bits (204), Expect = 1.7e-16
Identity = 66/178 (37.08%), Postives = 81/178 (45.51%), Query Frame = 1

Query: 29  DLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNL---------------- 88
           D    +D LCYV C+FC+TVLAV +P   L  TVTV+CGHCSNL                
Sbjct: 17  DHFSSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVS 76

Query: 89  ----SFLSTRPP-----------LQGQCID------------HP---LSFQSQVGFSTDI 148
               SFL   PP             GQ I+            HP   L   ++ G S D 
Sbjct: 77  NLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDH 136

Query: 149 RKGASTSSSS-----------SSSSMANEEEIQRIKAANPEIPHREAFSAAAKNWARY 150
            +       +           S+ +   +EEIQRIKA NP+I HREAFSAAAKNWA +
Sbjct: 137 LQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHF 194

BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|659091256|ref|XP_008446454.1| (PREDICTED: protein CRABS CLAW [Cucumis melo])

HSP 1 Score: 238.8 bits (608), Expect = 6.7e-60
Identity = 127/173 (73.41%), Postives = 138/173 (79.77%), Query Frame = 1

Query: 19  LMSSEDKSSM-DLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLST 78
           + +SEDKSSM DLVQPS+H CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 79  RPPLQGQCIDHPLSFQSQVGFSTD--IRKGASTSSSSSSSSMANE--------------- 138
           RPPLQGQCIDHPL+FQSQVGFS +  IRKGASTSS+S++SS+ N+               
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 139 ---------EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 165
                    EEIQRIKAANPEIPHREAFSAAAKNWARYIPNSA GS SGTH+N
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173

BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|802568623|ref|XP_012067815.1| (PREDICTED: protein CRABS CLAW isoform X1 [Jatropha curcas])

HSP 1 Score: 220.3 bits (560), Expect = 2.5e-54
Identity = 115/171 (67.25%), Postives = 132/171 (77.19%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K +MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNLEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS----------------------- 139
           PLQGQC+DHPL+ Q Q GF +D+RKG S+SSSSS+SS                       
Sbjct: 61  PLQGQCLDHPLTLQKQ-GFFSDLRKGQSSSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSA 120

Query: 140 --MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
                +EEIQRIKAANPEIPHREAFS AAKNWARYIPNSA GS SG+++N+
Sbjct: 121 YNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYIPNSAGGSVSGSNNND 170

BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|802568654|ref|XP_012067816.1| (PREDICTED: protein CRABS CLAW isoform X2 [Jatropha curcas])

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 114/171 (66.67%), Postives = 131/171 (76.61%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K +MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNLEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS----------------------- 139
           PLQGQC+DHPL+ Q   GF +D+RKG S+SSSSS+SS                       
Sbjct: 61  PLQGQCLDHPLTLQ---GFFSDLRKGQSSSSSSSTSSEPLSPKAPFVVKPPEKKHRLPSA 120

Query: 140 --MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
                +EEIQRIKAANPEIPHREAFS AAKNWARYIPNSA GS SG+++N+
Sbjct: 121 YNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYIPNSAGGSVSGSNNND 168

BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|643734661|gb|KDP41331.1| (hypothetical protein JCGZ_15738 [Jatropha curcas])

HSP 1 Score: 215.7 bits (548), Expect = 6.1e-53
Identity = 114/179 (63.69%), Postives = 132/179 (73.74%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K +MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNLEEKVTMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQ--------SQVGFSTDIRKGASTSSSSSSSS--------------- 139
           PLQGQC+DHPL+ Q         + GF +D+RKG S+SSSSS+SS               
Sbjct: 61  PLQGQCLDHPLTLQVLIYVCTKKKQGFFSDLRKGQSSSSSSSTSSEPLSPKAPFVVKPPE 120

Query: 140 ----------MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
                        +EEIQRIKAANPEIPHREAFS AAKNWARYIPNSA GS SG+++N+
Sbjct: 121 KKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYIPNSAGGSVSGSNNND 179

BLAST of Cp4.1LG09g02290 vs. NCBI nr
Match: gi|225423420|ref|XP_002263611.1| (PREDICTED: protein CRABS CLAW isoform X2 [Vitis vinifera])

HSP 1 Score: 208.4 bits (529), Expect = 9.7e-51
Identity = 111/171 (64.91%), Postives = 125/171 (73.10%), Query Frame = 1

Query: 20  MSSEDKSSMDLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 79
           M+ E+K++MDLV PS+HLCYV+CNFCNTVLAVGIPC+RLLDTVTVKCGHCSNLSFLSTRP
Sbjct: 1   MNPEEKATMDLVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRP 60

Query: 80  PLQGQCIDHPLSFQSQVGFSTDIRKGASTSSSSSSSS----------------------- 139
           PLQGQC+DH +S Q   G   D RKG S+SSSSS+SS                       
Sbjct: 61  PLQGQCLDHQMSLQ---GVCNDFRKGQSSSSSSSTSSEPVSPKAPFVVKPPEKKHRLPSA 120

Query: 140 --MANEEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDNE 166
                +EEIQRIK ANPEIPHREAFSAAAKNWARYIPNS  GS S + +NE
Sbjct: 121 YNRFMKEEIQRIKVANPEIPHREAFSAAAKNWARYIPNSPAGSVSESSNNE 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CRC_ARATH4.0e-3651.45Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2[more]
YABDL_ORYSJ5.9e-3249.09Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1 SV=1[more]
YAB5_ARATH1.3e-1840.14Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=1 SV=1[more]
YAB2_ORYSJ6.4e-1836.90Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1[more]
YAB6_ORYSJ1.4e-1738.12Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KQW3_CUCSA4.7e-6073.41Uncharacterized protein OS=Cucumis sativus GN=Csa_5G606780 PE=4 SV=1[more]
A0A067KYR0_JATCU4.2e-5363.69Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15738 PE=4 SV=1[more]
B9REB6_RICCO8.8e-5165.29Protein CRABS CLAW, putative OS=Ricinus communis GN=RCOM_1620070 PE=4 SV=1[more]
A0A059D6Y4_EUCGR2.8e-4964.12Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1[more]
A0A059D7D2_EUCGR2.8e-4964.12Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03140 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G69180.12.2e-3751.45 Plant-specific transcription factor YABBY family protein[more]
AT2G26580.17.2e-2040.14 plant-specific transcription factor YABBY family protein[more]
AT1G08465.11.8e-1838.16 Plant-specific transcription factor YABBY family protein[more]
AT2G45190.18.8e-1835.71 Plant-specific transcription factor YABBY family protein[more]
AT4G00180.11.7e-1637.08 Plant-specific transcription factor YABBY family protein[more]
Match NameE-valueIdentityDescription
gi|659091256|ref|XP_008446454.1|6.7e-6073.41PREDICTED: protein CRABS CLAW [Cucumis melo][more]
gi|802568623|ref|XP_012067815.1|2.5e-5467.25PREDICTED: protein CRABS CLAW isoform X1 [Jatropha curcas][more]
gi|802568654|ref|XP_012067816.1|1.2e-5366.67PREDICTED: protein CRABS CLAW isoform X2 [Jatropha curcas][more]
gi|643734661|gb|KDP41331.1|6.1e-5363.69hypothetical protein JCGZ_15738 [Jatropha curcas][more]
gi|225423420|ref|XP_002263611.1|9.7e-5164.91PREDICTED: protein CRABS CLAW isoform X2 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
Vocabulary: INTERPRO
TermDefinition
IPR006780YABBY
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0048437 floral organ development
biological_process GO:0007275 multicellular organism development
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0009889 regulation of biosynthetic process
biological_process GO:0003002 regionalization
biological_process GO:0009886 post-embryonic animal morphogenesis
biological_process GO:1901576 organic substance biosynthetic process
biological_process GO:0048507 meristem development
biological_process GO:0016043 cellular component organization
biological_process GO:0048440 carpel development
biological_process GO:0048479 style development
biological_process GO:0048443 stamen development
biological_process GO:0010093 specification of floral organ identity
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009909 regulation of flower development
biological_process GO:0031540 regulation of anthocyanin biosynthetic process
biological_process GO:0048438 floral whorl development
biological_process GO:0048827 phyllome development
biological_process GO:0006333 chromatin assembly or disassembly
biological_process GO:0010582 floral meristem determinacy
biological_process GO:0010254 nectary development
biological_process GO:0048441 petal development
biological_process GO:0048481 plant ovule development
biological_process GO:0009827 plant-type cell wall modification
biological_process GO:0009944 polarity specification of adaxial/abaxial axis
biological_process GO:0009860 pollen tube growth
biological_process GO:0008150 biological_process
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g02290.1Cp4.1LG09g02290.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006780YABBY proteinPANTHERPTHR31675FAMILY NOT NAMEDcoord: 11..155
score: 2.9
IPR006780YABBY proteinPFAMPF04690YABBYcoord: 33..114
score: 1.8E-21coord: 121..149
score: 1.1
NoneNo IPR availablePANTHERPTHR31675:SF3SUBFAMILY NOT NAMEDcoord: 11..155
score: 2.9

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g02290Cp4.1LG01g15160Cucurbita pepo (Zucchini)cpecpeB034
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g02290Cucurbita pepo (Zucchini)cpecpeB026
Cp4.1LG09g02290Cucurbita pepo (Zucchini)cpecpeB054
Cp4.1LG09g02290Cucumber (Gy14) v1cgycpeB0248
Cp4.1LG09g02290Cucurbita maxima (Rimu)cmacpeB072
Cp4.1LG09g02290Cucurbita maxima (Rimu)cmacpeB105
Cp4.1LG09g02290Cucurbita moschata (Rifu)cmocpeB046
Cp4.1LG09g02290Wild cucumber (PI 183967)cpecpiB018
Cp4.1LG09g02290Cucumber (Chinese Long) v2cpecuB026
Cp4.1LG09g02290Bottle gourd (USVL1VR-Ls)cpelsiB024
Cp4.1LG09g02290Bottle gourd (USVL1VR-Ls)cpelsiB041
Cp4.1LG09g02290Bottle gourd (USVL1VR-Ls)cpelsiB044
Cp4.1LG09g02290Watermelon (Charleston Gray)cpewcgB040
Cp4.1LG09g02290Watermelon (Charleston Gray)cpewcgB045
Cp4.1LG09g02290Watermelon (Charleston Gray)cpewcgB049
Cp4.1LG09g02290Watermelon (Charleston Gray)cpewcgB053
Cp4.1LG09g02290Watermelon (97103) v1cpewmB021
Cp4.1LG09g02290Watermelon (97103) v1cpewmB031
Cp4.1LG09g02290Watermelon (97103) v1cpewmB051
Cp4.1LG09g02290Watermelon (97103) v1cpewmB059
Cp4.1LG09g02290Melon (DHL92) v3.5.1cpemeB024
Cp4.1LG09g02290Melon (DHL92) v3.5.1cpemeB029
Cp4.1LG09g02290Melon (DHL92) v3.5.1cpemeB034
Cp4.1LG09g02290Melon (DHL92) v3.5.1cpemeB036
Cp4.1LG09g02290Cucumber (Gy14) v2cgybcpeB009
Cp4.1LG09g02290Melon (DHL92) v3.6.1cpemedB034
Cp4.1LG09g02290Melon (DHL92) v3.6.1cpemedB039
Cp4.1LG09g02290Melon (DHL92) v3.6.1cpemedB042
Cp4.1LG09g02290Silver-seed gourdcarcpeB0342
Cp4.1LG09g02290Silver-seed gourdcarcpeB0538
Cp4.1LG09g02290Silver-seed gourdcarcpeB0841
Cp4.1LG09g02290Cucumber (Chinese Long) v3cpecucB0020
Cp4.1LG09g02290Wax gourdcpewgoB0023
Cp4.1LG09g02290Wax gourdcpewgoB0051