Cp4.1LG09g00640 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG09g00640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ornithine cyclodeaminase/mu-crystallin
Location	Cp4.1LG09 : 377219 .. 379100 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGTAAGCAAAAATCCCTGAACGCCTAATTATTTTCTGAACTCTTTGATATTGTCCATAGTTAATTGAGCTTAAGAGTCAAATTGTTCTGCTCCCCTCTCTAAGCTCCACACCATTAGAGGATCGGTTTTATTAACACAAATAGGATAAATTTCTATCTCGATCGCTATTAGCCATGGTTCGAAACATGAAATTAAATAGTAATTTTACAAAAGCTTGACATAAATCTGTTACATTCAAAAGCGTCGCTATAGTAAATTAGCCCCCCACCTTTTGAAAATGAAAACTCAAGATATTACTAAATGTTAAAACTACCAGTTTTTCTTCCAATTTCATTCTCTTATTAAGCTGGTAAAATTGTGGTACAGCGGAAGGTTTTTAGCCTTGGTTGATATACACAAATGAAGAATAGGAAAAGGGAGGAAGAAGGAGGGGGTTACTGCCACCGTGAGTGTGGTGAGTAGAAAGAGAGAGTGAGTTAGTGAAAGGAGAGAGTAGATTTTTTTTTTTTTTTTTCATGTTAATTTAAATTAATTTAAATAAGTTGAGAGCCTTTTTTTAAACCTATTTCTCAAAATTTGTACCTTTTTTAATTTTCAAATCTATAGTTTGCATCTAAATATTATAAATTTATAATCAATAGATTTTTTTTCCATTTTTTTTTTTTTTAGTGTTAAATAGGTTCTGTCCTTTTTATATCTTTTAAAATTCCCCACAAAATAAAATTTTTTATATTACAGAATCTTTGCTTGTCTGATAAGTTTGTGAGTTTTAGGTGGAAAGTATTTAAGCCCAAAAGACGAAACAAATCTCTCAAAGAACATAAAAAGTAGATCTCCCATGTTTATCACCAAAGAAGCTTTTTGGCTCAAAGAACATAAAAAGTAGATCTCCCATGTTTATCACTAAAGAAGCTTTGGACTCCATTCTTTCCCACCAAAATCCAAAGCGAACACTTCCTATCCCCTCTCCCGATCGTCTCCCCCACAATTTCCAGCCCAATGCGTCAAAGCCTCGCCGTTCAGCCTCATTCCTCTCCTCCTCATGCTCTTTTGGTTTTCTTCACCATCTCTTCCCTACAATAGACGTCGAAGTTGTGACCCATTTCCCCCAAAATTCCGCCATAAGCTTACCTGCAACTCATGCAAGCTACTTGCACTTTTGCTCCACCACCTGCAAACTCTAGCCTCCATGGACGGCACTACCTTGACTCTTTACAGAACCTCGCGTCTCTGGTTTAGCTGCAAAATATTAGATAGCCCTGGTAGCAGCGTCATGCTTAGGGTGCGTGTGGGTGCTTTGGGACCCCATTAGATCCGGTGTGAAGAAAGTGACTATTTGGAACAGAACGGAGGAAAGGGCAAAAAATGCAGGGCTGGACGGGGTCTTCTTGAAGAGTTGTGGAACTCCGGATCGTGCAATTGTGTGTGCAACCAACTCAGAGCTTCCTCTGATGAAAGGTATTTTATCCCATATTATAATTTTTAGTGTATTTCGCTTCTGTCGCCTGTGGACTTGTATGTCTCTAACTTCGGATTAGTAAGATTGCATGAAGTCGAATTTGGAGCTTCTTGTTCGAATCTGATGGGATTGATTAACGGGGGGTCGGTGAGAAGAAGGAATAGGTAGGAAATAACTGCGTTCAGATCTGTTGTTGGCTCTGCAATGGCGGACCTTGTTGCGAGAGGAGCATCCGAGAGTTTTTCAAGCTTCCTTTGATTAACAGGTGATTCCTCTTTACTCCTGTTTTCTTGCTTGGTCTTCTGTTTAATTTTGAACTGGACGACCAATTTAGATTAAATCCTTTAATAGAAAATCAAAAATGTTTTTTTAGAGATATTTTGGGAGTTTTGTTAAATAGAAATAGGTGGACAGTGA

mRNA sequence

ATGCAAGGTGGAAAGTATTTAAGCCCAAAAGACGAAACAAATCTCTCAAAGAACATAAAAAGTAGATCTCCCATGTTTATCACCAAAGAAGCTTTTTGGCTCAAAGAACATAAAAAAAGCTTTGGACTCCATTCTTTCCCACCAAAATCCAAAGCGAACACTTCCTATCCCCTCTCCCGATCGTCTCCCCCACAATTTCCAGCCCAATGCGTCAAAGCCTCGCCGTTCAGCCTCATTCCTCTCCTCCTCATGCTCTTTTGGTTTTCTTCACCATCTCTTCCCTACAATAGACGTCGAAGTTGTGACCCATTTCCCCCAAAATTCCGCCATAAGCTTACCTGCAACTCATGCAAGCTACTTGCACTTTTGCTCCACCACCTGCAAACTCTAGCCTCCATGGACGGCACTACCTTGACTCTTTACAGAACCTCGCGTCTCTGGTTTAGCTGCAAAATATTAGATAGCCCTGCGTCATGCTTAGGGTGCGTGTGGGTGCTTTGGGACCCCATTAGATCCGGTGTGAAGAAAGTGACTATTTGGAACAGAACGGAGGAAAGGGCAAAAAATGCAGGGCTGGACGGGGTCTTCTTGAAGAGTTGTGGAACTCCGGATCGTGCAATTGTGTGTGCAACCAACTCAGAGCTTCCTCTGATGAAAGAAATAGGTGGACAGTGA

Coding sequence (CDS)

ATGCAAGGTGGAAAGTATTTAAGCCCAAAAGACGAAACAAATCTCTCAAAGAACATAAAAAGTAGATCTCCCATGTTTATCACCAAAGAAGCTTTTTGGCTCAAAGAACATAAAAAAAGCTTTGGACTCCATTCTTTCCCACCAAAATCCAAAGCGAACACTTCCTATCCCCTCTCCCGATCGTCTCCCCCACAATTTCCAGCCCAATGCGTCAAAGCCTCGCCGTTCAGCCTCATTCCTCTCCTCCTCATGCTCTTTTGGTTTTCTTCACCATCTCTTCCCTACAATAGACGTCGAAGTTGTGACCCATTTCCCCCAAAATTCCGCCATAAGCTTACCTGCAACTCATGCAAGCTACTTGCACTTTTGCTCCACCACCTGCAAACTCTAGCCTCCATGGACGGCACTACCTTGACTCTTTACAGAACCTCGCGTCTCTGGTTTAGCTGCAAAATATTAGATAGCCCTGCGTCATGCTTAGGGTGCGTGTGGGTGCTTTGGGACCCCATTAGATCCGGTGTGAAGAAAGTGACTATTTGGAACAGAACGGAGGAAAGGGCAAAAAATGCAGGGCTGGACGGGGTCTTCTTGAAGAGTTGTGGAACTCCGGATCGTGCAATTGTGTGTGCAACCAACTCAGAGCTTCCTCTGATGAAAGAAATAGGTGGACAGTGA

Protein sequence

MQGGKYLSPKDETNLSKNIKSRSPMFITKEAFWLKEHKKSFGLHSFPPKSKANTSYPLSRSSPPQFPAQCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASMDGTTLTLYRTSRLWFSCKILDSPASCLGCVWVLWDPIRSGVKKVTIWNRTEERAKNAGLDGVFLKSCGTPDRAIVCATNSELPLMKEIGGQ

Homology

[Close]

BLAST of Cp4.1LG09g00640 vs. TrEMBL
Match: A0A0A0L8U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G184010 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.1e-18
Identity = 100/246 (40.65%), Postives = 114/246 (46.34%), Query Frame = 1


Query: 8   SPKD--ETNLSKNIKSRSPMFITKEAFW-------LKEHKKSFGLHSFPPKSKANTSYPL 67
           +PKD  ETNL+K I  R+PM ITKEA         L EH +S     FP       S P+
Sbjct: 7   NPKDDTETNLTKKITVRTPMVITKEALDSILQHQNLIEHFQSSLPIVFP-----TISSPM 66

Query: 68  SRSSPPQFPAQCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCK 127
            +S   Q         P S   LLLM  W SSPSLPY   +    FP      L      
Sbjct: 67  RQSHAVQ---------PHS--SLLLMPSWSSSPSLPYIGVKLVTHFPQNSAINLPAIHAS 126

Query: 128 LLALLLHHLQTLASMDGTTLTLYRTSRL-WFSCKILDSP---------ASCLGCVWVLWD 187
                    QTL SMDGT LTLYRTS +   + K L  P         A  LG   +   
Sbjct: 127 YSLFSSTTGQTLGSMDGTALTLYRTSCISGLAAKYLARPDSRVMVMVGAGALGPHLIKAH 186

Query: 188 -PIRSGVKKVTIWNRTEERAK--------NAGLDGVFLKSCGTPDRAI------VCATNS 220
             +R  VKKV IWNRTEERAK        NAGLDGV  +S    D AI       CATNS
Sbjct: 187 LAVRPSVKKVIIWNRTEERAKKLADEMRENAGLDGVCFESSANLDDAISVADIVSCATNS 236

[Close]

BLAST of Cp4.1LG09g00640 vs. TrEMBL
Match: W9SGT1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_014224 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-11
Identity = 79/231 (34.20%), Postives = 106/231 (45.89%), Query Frame = 1


Query: 16  SKNIKSRSPMFITKEAFW-LKEHKKSFG-LHSFPPKSKANTSYPLSRSSPPQFPAQCVKA 75
           S  I   SP+FIT ++   +  H+      HS  P   A+ S PL ++            
Sbjct: 3   STTIAITSPIFITTQSLHTILSHQTLIDHFHSSLPTVSASLSTPLRQNHA---------V 62

Query: 76  SPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASM 135
           SP S   LLLM  W +SPSLPY   +    FP      L       +       QTLASM
Sbjct: 63  SPTS--SLLLMPSWSTSPSLPYIGVKLVTYFPQNSTLSLPGIHASYVLFSSATGQTLASM 122

Query: 136 DGTTLTLYRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKVTIWNR 195
           DGT LTL+RTS +   + +IL   DS    +     L   +       R G+++V IWNR
Sbjct: 123 DGTALTLFRTSCVSGLASRILARDDSKVLVMVGAGALAPHLIKAHLAARPGLERVVIWNR 182

Query: 196 TEERAKN--------AGLDGVFLKSCGTPDRA------IVCATNSELPLMK 220
           T E+A+N        +GLDGV  +S G  +        + CATNSE PL+K
Sbjct: 183 TVEKARNLAEQLQQSSGLDGVCFESNGCLEEVVGMGDIVSCATNSEAPLVK 222

[Close]

BLAST of Cp4.1LG09g00640 vs. TrEMBL
Match: M5XSR9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017527mg PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-09
Identity = 65/176 (36.93%), Postives = 81/176 (46.02%), Query Frame = 1


Query: 69  QCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQ 128
           Q    SP S   LLLM  W SSPSLPY   +    FP      L       +       Q
Sbjct: 47  QSYDVSPSS--SLLLMPSWSSSPSLPYLGVKLVTYFPQNSALNLPGVHASYVLFSSTTGQ 106

Query: 129 TLASMDGTTLTLYRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKV 188
           TLA+MDGT LTLYRTS +   + +IL   DS    +     L   +       R  +KKV
Sbjct: 107 TLATMDGTALTLYRTSCVSALASRILSRNDSQVLVMIGAGALAPHLIRAHLAARPSLKKV 166

Query: 189 TIWNRTEERAKN--------AGLDGVFLKSCGTPDRA------IVCATNSELPLMK 220
            IWNRT E+A+N           +GV  +S G  D        + CATNSE+PL+K
Sbjct: 167 IIWNRTVEKARNLAEKMQESVAFEGVCFESNGCLDEVVGMGDIVSCATNSEVPLVK 220

[Close]

BLAST of Cp4.1LG09g00640 vs. TrEMBL
Match: B9H3M5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s07100g PE=4 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-07
Identity = 75/231 (32.47%), Postives = 96/231 (41.56%), Query Frame = 1


Query: 23  SPMFITKEAFWLKEHKKSFGLH---SFPPKSKA-----NTSYPLSRSSPPQFPAQCVKAS 82
           SP+F+T E+        S   H   S P  S         SY LS+SS            
Sbjct: 18  SPLFLTNESLHSILAHNSLIQHFHTSLPTTSSTLHTPIRQSYDLSQSSS----------- 77

Query: 83  PFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASMD 142
                 LLLM  W S+PSLPY   +    FP      L       +       QTLASMD
Sbjct: 78  ------LLLMPSWSSTPSLPYIGVKLVTYFPQNSALNLPGIHASYVLFSSTTGQTLASMD 137

Query: 143 GTTLTLYRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKVTIWNRT 202
           GT LTLYRTS +   + KIL   DS    +     L   +       R  ++KV IWNRT
Sbjct: 138 GTVLTLYRTSCVSGLASKILARNDSKVLVMVGAGALAPHLIKAHLAARPSLQKVIIWNRT 197

Query: 203 EERAKN---------AGLDGVFLKSCGTPDRAI------VCATNSELPLMK 220
            ++A +          G DGV  +S G  +  I       CATN++ PL+K
Sbjct: 198 VKKASDLAEKLKKECIGNDGVCFESNGNLEEIIGLGDIVSCATNADAPLVK 231

[Close]

BLAST of Cp4.1LG09g00640 vs. TrEMBL
Match: A0A0L9TZS6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g207200 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-07
Identity = 78/243 (32.10%), Postives = 103/243 (42.39%), Query Frame = 1


Query: 10  KDETNLSKNIKSRSPMFITKEAFW-LKEHKKSFG-LHSFPPKSKA------NTSYPLSRS 69
           KDET++     S SP+FI+ ++   +  H+       S  P++ A         YPLS S
Sbjct: 6   KDETSIPN--ASSSPIFISADSLCSILTHQTLINHFRSTLPQASAILQTTIRQHYPLSSS 65

Query: 70  SPPQFPAQCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLA 129
           S                  LLLM  W SSPSLPY   +    FP      L       + 
Sbjct: 66  SS-----------------LLLMPCWSSSPSLPYVGVKLVTHFPQNSALNLPGVQGSYVL 125

Query: 130 LLLHHLQTLASMDGTTLTLYRTSRL-WFSCKILDSPAS----CLGCVWVLWDPIRS---- 189
                 QTLASMD T LTLYRTS +   + K L    S     +G   +    I++    
Sbjct: 126 FSSTTGQTLASMDSTELTLYRTSCVSGLASKYLARQDSEVLVMVGAGALAPHLIKAHLSA 185

Query: 190 --GVKKVTIWNRTEERA--------KNAGLDGVFLKSCGTPDRA------IVCATNSELP 220
              ++KV IWNRT E+A        +N    GV  + CG  D        + CATNSE P
Sbjct: 186 VPSLRKVFIWNRTVEKATTLADKLKENEEFAGVSFEGCGCLDEVVGLGDIVSCATNSEKP 229

[Close]

BLAST of Cp4.1LG09g00640 vs. TAIR10
Match: AT5G52810.1 (AT5G52810.1 NAD(P)-binding Rossmann-fold superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.5e-07
Identity = 55/164 (33.54%), Postives = 71/164 (43.29%), Query Frame = 1


Query: 81  LLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASMDGTTLTL 140
           LLLM  W SS SLPY   +    FP      L               QTLA+MDGT LTL
Sbjct: 53  LLLMPSWSSSSSLPYMGVKLVTYFPHNSSQNLPGIHGSYTLFSSTTGQTLATMDGTVLTL 112

Query: 141 YRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKVTIWNRTEERA-- 200
           YRTS +     KIL   DS    +     L   +       +  +++V IWNRT +RA  
Sbjct: 113 YRTSSVSGLGSKILARDDSQVLIMVGSGALAPHLIKSHLAAKPSLRRVIIWNRTPQRAQE 172

Query: 201 ------KNAGLDGVFLKSCGTPDR------AIVCATNSELPLMK 220
                 K+     +   S  + D+       I CATNS +PL+K
Sbjct: 173 LAETLSKDPQHKEISFDSHDSLDQIIPLGDIISCATNSTVPLVK 216

[Close]

BLAST of Cp4.1LG09g00640 vs. NCBI nr
Match: gi|449445983|ref|XP_004140751.1| (PREDICTED: uncharacterized protein P11E10.01 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18
Identity = 100/246 (40.65%), Postives = 114/246 (46.34%), Query Frame = 1


Query: 8   SPKD--ETNLSKNIKSRSPMFITKEAFW-------LKEHKKSFGLHSFPPKSKANTSYPL 67
           +PKD  ETNL+K I  R+PM ITKEA         L EH +S     FP       S P+
Sbjct: 7   NPKDDTETNLTKKITVRTPMVITKEALDSILQHQNLIEHFQSSLPIVFP-----TISSPM 66

Query: 68  SRSSPPQFPAQCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCK 127
            +S   Q         P S   LLLM  W SSPSLPY   +    FP      L      
Sbjct: 67  RQSHAVQ---------PHS--SLLLMPSWSSSPSLPYIGVKLVTHFPQNSAINLPAIHAS 126

Query: 128 LLALLLHHLQTLASMDGTTLTLYRTSRL-WFSCKILDSP---------ASCLGCVWVLWD 187
                    QTL SMDGT LTLYRTS +   + K L  P         A  LG   +   
Sbjct: 127 YSLFSSTTGQTLGSMDGTALTLYRTSCISGLAAKYLARPDSRVMVMVGAGALGPHLIKAH 186

Query: 188 -PIRSGVKKVTIWNRTEERAK--------NAGLDGVFLKSCGTPDRAI------VCATNS 220
             +R  VKKV IWNRTEERAK        NAGLDGV  +S    D AI       CATNS
Sbjct: 187 LAVRPSVKKVIIWNRTEERAKKLADEMRENAGLDGVCFESSANLDDAISVADIVSCATNS 236

[Close]

BLAST of Cp4.1LG09g00640 vs. NCBI nr
Match: gi|659077634|ref|XP_008439304.1| (PREDICTED: uncharacterized protein P11E10.01 [Cucumis melo])

HSP 1 Score: 96.3 bits (238), Expect = 7.3e-17
Identity = 98/244 (40.16%), Postives = 112/244 (45.90%), Query Frame = 1


Query: 10  KDET--NLSKNIKSRSPMFITKEAFW-------LKEHKKSFGLHSFPPKSKANTSYPLSR 69
           KD+T  NL+K I  R+PM ITKEA         L EH +S     FP       S P+ +
Sbjct: 74  KDDTKSNLTKKITVRTPMVITKEALDSILQHQNLIEHFQSSLPIVFP-----TISSPMRQ 133

Query: 70  SSPPQFPAQCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLL 129
           S   Q         P S   LLLM  W SSPSLPY   +    FP      L        
Sbjct: 134 SHVVQ---------PHS--SLLLMPSWSSSPSLPYIGVKLVTHFPQNSAINLPAIHASYS 193

Query: 130 ALLLHHLQTLASMDGTTLTLYRTSRL-WFSCKILDSP---------ASCLGCVWVLWD-P 189
                  QTL SMDGT LTLYRTS +   + K L  P         A  LG   +     
Sbjct: 194 LFSSTTGQTLGSMDGTALTLYRTSCISGLAAKYLARPDSRVMVMVGAGALGPHLIKAHLA 253

Query: 190 IRSGVKKVTIWNRTEERAK--------NAGLDGVFLKSCGTPDRAI------VCATNSEL 220
           +R  VKKV IWNRTEERAK        NAGLDGV  +S    D AI       CATNSE+
Sbjct: 254 VRPSVKKVIIWNRTEERAKRLADEMRENAGLDGVCFESSANLDDAISVADIVSCATNSEV 301

[Close]

BLAST of Cp4.1LG09g00640 vs. NCBI nr
Match: gi|703134833|ref|XP_010105735.1| (hypothetical protein L484_014224 [Morus notabilis])

HSP 1 Score: 77.0 bits (188), Expect = 4.6e-11
Identity = 79/231 (34.20%), Postives = 106/231 (45.89%), Query Frame = 1


Query: 16  SKNIKSRSPMFITKEAFW-LKEHKKSFG-LHSFPPKSKANTSYPLSRSSPPQFPAQCVKA 75
           S  I   SP+FIT ++   +  H+      HS  P   A+ S PL ++            
Sbjct: 3   STTIAITSPIFITTQSLHTILSHQTLIDHFHSSLPTVSASLSTPLRQNHA---------V 62

Query: 76  SPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASM 135
           SP S   LLLM  W +SPSLPY   +    FP      L       +       QTLASM
Sbjct: 63  SPTS--SLLLMPSWSTSPSLPYIGVKLVTYFPQNSTLSLPGIHASYVLFSSATGQTLASM 122

Query: 136 DGTTLTLYRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKVTIWNR 195
           DGT LTL+RTS +   + +IL   DS    +     L   +       R G+++V IWNR
Sbjct: 123 DGTALTLFRTSCVSGLASRILARDDSKVLVMVGAGALAPHLIKAHLAARPGLERVVIWNR 182

Query: 196 TEERAKN--------AGLDGVFLKSCGTPDRA------IVCATNSELPLMK 220
           T E+A+N        +GLDGV  +S G  +        + CATNSE PL+K
Sbjct: 183 TVEKARNLAEQLQQSSGLDGVCFESNGCLEEVVGMGDIVSCATNSEAPLVK 222

[Close]

BLAST of Cp4.1LG09g00640 vs. NCBI nr
Match: gi|470144819|ref|XP_004308045.1| (PREDICTED: uncharacterized protein P11E10.01 [Fragaria vesca subsp. vesca])

HSP 1 Score: 72.8 bits (177), Expect = 8.6e-10
Identity = 75/223 (33.63%), Postives = 100/223 (44.84%), Query Frame = 1


Query: 24  PMFITKEAFW-LKEHKKSFG-LHSFPPKSKANTSYPLSRSSPPQFPAQCVKASPFSLIPL 83
           P+FIT ++   +  H+      HS  P   ++   PL +S               S   L
Sbjct: 14  PVFITTDSLHSILSHQTLINHFHSSLPAVSSSLCSPLRQSHAVS-----------STSSL 73

Query: 84  LLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQTLASMDGTTLTLY 143
           LLM  W SSPSLPY   +    FP      L       +       QTLA+MDGT LTLY
Sbjct: 74  LLMPSWSSSPSLPYIGVKLVTYFPLNSAVSLPGIHGSYVLFSSTSGQTLATMDGTALTLY 133

Query: 144 RTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKVTIWNRTEERAK-- 203
           RT+ +   + +IL   DS    +     L   +       R G+K+V IWNRTEE+A+  
Sbjct: 134 RTACVSGLASRILSRNDSEVLVMVGAGALAPHLIRAHLAARPGLKRVIIWNRTEEKARAL 193

Query: 204 ------NAGLDGVFLKSCGTPDRA------IVCATNSELPLMK 220
                 + G DGV   SCG  D A      + CATNSE+ L+K
Sbjct: 194 AAEMRGSLGGDGVEFGSCGRLDEAVEMGDIVSCATNSEVALVK 225

[Close]

BLAST of Cp4.1LG09g00640 vs. NCBI nr
Match: gi|645258311|ref|XP_008234827.1| (PREDICTED: uncharacterized protein P11E10.01 [Prunus mume])

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-09
Identity = 65/176 (36.93%), Postives = 81/176 (46.02%), Query Frame = 1


Query: 69  QCVKASPFSLIPLLLMLFWFSSPSLPYNRRRSCDPFPPKFRHKLTCNSCKLLALLLHHLQ 128
           Q    SP S   LLLM  W SSPSLPY   +    FP      L       +       Q
Sbjct: 47  QSYDVSPSS--SLLLMPSWSSSPSLPYLGVKLVTYFPQNSALNLPGVHANYVLFSSTTGQ 106

Query: 129 TLASMDGTTLTLYRTSRL-WFSCKIL---DSPASCLGCVWVLWDPI-------RSGVKKV 188
           TLA+MDGT LTLYRTS +   + +IL   DS    +     L   +       R  +KKV
Sbjct: 107 TLATMDGTALTLYRTSCVSALASRILSRNDSQVLVMIGAGALAPHLIRAHLAARPSLKKV 166

Query: 189 TIWNRTEERAKN--------AGLDGVFLKSCGTPDRA------IVCATNSELPLMK 220
            IWNRT E+A+N           +GV  +S G  D        + CATNSE+PL+K
Sbjct: 167 IIWNRTVEKARNLAEKMQESVAFEGVCFESSGCLDEVVGMGDIVSCATNSEVPLVK 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG09g00640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG09g00640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8U0_CUCSA	2.1e-18	40.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G184010 PE=4 SV=1	[more]
W9SGT1_9ROSA	3.2e-11	34.20	Uncharacterized protein OS=Morus notabilis GN=L484_014224 PE=4 SV=1	[more]
M5XSR9_PRUPE	2.3e-09	36.93	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017527mg PE=4 SV=1	[more]
B9H3M5_POPTR	1.6e-07	32.47	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s07100g PE=4 SV=2	[more]
A0A0L9TZS6_PHAAN	2.1e-07	32.10	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g207200 PE=4 SV=1	[more]

BLAST of Cp4.1LG09g00640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52810.1	2.5e-07	33.54	NAD(P)-binding Rossmann-fold superfamily protein	[more]

BLAST of Cp4.1LG09g00640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449445983\|ref\|XP_004140751.1\|	3.0e-18	40.65	PREDICTED: uncharacterized protein P11E10.01 [Cucumis sativus]	[more]
gi\|659077634\|ref\|XP_008439304.1\|	7.3e-17	40.16	PREDICTED: uncharacterized protein P11E10.01 [Cucumis melo]	[more]
gi\|703134833\|ref\|XP_010105735.1\|	4.6e-11	34.20	hypothetical protein L484_014224 [Morus notabilis]	[more]
gi\|470144819\|ref\|XP_004308045.1\|	8.6e-10	33.63	PREDICTED: uncharacterized protein P11E10.01 [Fragaria vesca subsp. vesca]	[more]
gi\|645258311\|ref\|XP_008234827.1\|	1.9e-09	36.93	PREDICTED: uncharacterized protein P11E10.01 [Prunus mume]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0006560	proline metabolic process
biological_process	GO:0034976	response to endoplasmic reticulum stress
biological_process	GO:0009627	systemic acquired resistance
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008473	ornithine cyclodeaminase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG09g00640.1	Cp4.1LG09g00640.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG09g00640	Cucsa.108200	Cucumber (Gy14) v1	cgycpeB0240
Cp4.1LG09g00640	CmaCh16G000940	Cucurbita maxima (Rimu)	cmacpeB339
Cp4.1LG09g00640	CmaCh18G012740	Cucurbita maxima (Rimu)	cmacpeB415
Cp4.1LG09g00640	CmoCh18G013050	Cucurbita moschata (Rifu)	cmocpeB376
Cp4.1LG09g00640	CmoCh16G001000	Cucurbita moschata (Rifu)	cmocpeB303
Cp4.1LG09g00640	Cla006141	Watermelon (97103) v1	cpewmB032
Cp4.1LG09g00640	Csa3G184010	Cucumber (Chinese Long) v2	cpecuB039
Cp4.1LG09g00640	MELO3C006954	Melon (DHL92) v3.5.1	cpemeB041
Cp4.1LG09g00640	ClCG05G008460	Watermelon (Charleston Gray)	cpewcgB046
Cp4.1LG09g00640	CSPI03G17340	Wild cucumber (PI 183967)	cpecpiB034
Cp4.1LG09g00640	Lsi05G011860	Bottle gourd (USVL1VR-Ls)	cpelsiB035
Cp4.1LG09g00640	MELO3C006954.2	Melon (DHL92) v3.6.1	cpemedB047
Cp4.1LG09g00640	CsaV3_3G017540	Cucumber (Chinese Long) v3	cpecucB0039
Cp4.1LG09g00640	Bhi01G001035	Wax gourd	cpewgoB0028
Cp4.1LG09g00640	CsGy3G017390	Cucumber (Gy14) v2	cgybcpeB287
Cp4.1LG09g00640	Carg15103	Silver-seed gourd	carcpeB1373
Cp4.1LG09g00640	Carg22135	Silver-seed gourd	carcpeB1038

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG09g00640	Cp4.1LG14g06350	Cucurbita pepo (Zucchini)	cpecpeB023

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG09g00640	Cucurbita pepo (Zucchini)	cpecpeB021
Cp4.1LG09g00640	Cucurbita pepo (Zucchini)	cpecpeB052
Cp4.1LG09g00640	Cucurbita pepo (Zucchini)	cpecpeB057
Cp4.1LG09g00640	Cucurbita maxima (Rimu)	cmacpeB253
Cp4.1LG09g00640	Cucurbita maxima (Rimu)	cmacpeB301
Cp4.1LG09g00640	Cucurbita maxima (Rimu)	cmacpeB598
Cp4.1LG09g00640	Cucurbita moschata (Rifu)	cmocpeB264
Cp4.1LG09g00640	Cucurbita moschata (Rifu)	cmocpeB546
Cp4.1LG09g00640	Wild cucumber (PI 183967)	cpecpiB038
Cp4.1LG09g00640	Cucumber (Chinese Long) v2	cpecuB038
Cp4.1LG09g00640	Cucumber (Chinese Long) v2	cpecuB043
Cp4.1LG09g00640	Bottle gourd (USVL1VR-Ls)	cpelsiB019
Cp4.1LG09g00640	Bottle gourd (USVL1VR-Ls)	cpelsiB039
Cp4.1LG09g00640	Watermelon (Charleston Gray)	cpewcgB022
Cp4.1LG09g00640	Watermelon (Charleston Gray)	cpewcgB044
Cp4.1LG09g00640	Watermelon (97103) v1	cpewmB035
Cp4.1LG09g00640	Melon (DHL92) v3.5.1	cpemeB017
Cp4.1LG09g00640	Melon (DHL92) v3.5.1	cpemeB043
Cp4.1LG09g00640	Cucumber (Gy14) v2	cgybcpeB286
Cp4.1LG09g00640	Cucumber (Gy14) v2	cgybcpeB583
Cp4.1LG09g00640	Cucumber (Gy14) v2	cgybcpeB584
Cp4.1LG09g00640	Melon (DHL92) v3.6.1	cpemedB020
Cp4.1LG09g00640	Melon (DHL92) v3.6.1	cpemedB049
Cp4.1LG09g00640	Melon (DHL92) v3.6.1	cpemedB050
Cp4.1LG09g00640	Silver-seed gourd	carcpeB0994
Cp4.1LG09g00640	Cucumber (Chinese Long) v3	cpecucB0045
Cp4.1LG09g00640	Cucumber (Chinese Long) v3	cpecucB0046