Cp4.1LG08g13480 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g13480
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Remorin
Location	Cp4.1LG08 : 9791225 .. 9793322 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCTATTTTAAAAATAAAAAGAATAGTGAGAGGGGGAAAAAACAAAGAGAGAAAAAAGAAATTAATGAAGAAAAGTAAAATAATAATGTTGATATTTTTTATTGGAAATGTGTTCCACGTAATACATTTTGTGGCTAATAATTCCCAAATTTCAAATCAAACAAACTATTCATTTTGGAATTATATTCTCAAAGGGACTCTCTCTCTTTCCCCTTCCTTCACTCAAAATCTTCTCATTACTCATAAAAACACTCTCTGCATTTCTTCAATTCCCACCATGTTCAACGATCAAGCACTACCAGCAGGAACCTCCAGACCTACTCATGCCGGAGACGGTGAAGATCAAATCCGCGAAATCCACGCTCTGACTCCCACACCACCACCGCCGGTGACGGAGAATCGGAACCGCCGCGGAGAGGCTTGGGAAACGGCGAGCCAGAGATCGACTTCAATGGCGAGCGAAGGCGCTTCCAGTGAGAATTTTACTTCCATAAGTAGAGAGTTCAATGCTCTGGTAATCGCCGGCGCGGAGATCGGCGACGGTTATCGCCAGGACCGGCCGATTAACGAACCTCCGAATAACTTGAGCAGGATTGGAGAGGAAGATCAGGCTACGCCTGAGGAGGAGACGAATCCGTTGGCGATCGTACCGGACGGTCATCCGTTTGATGATCAATTAACGCTGTCGTCAATCACGAGACAGGAGAACAGTAGCGGCGGAGGAGCAGCAGCGACAAGAGAGATTTCGTTGCAGATGGTGAAGAAGGAGGAGGTGGAGACGAAGATTAGCGCATGGCAGAACGCGAAGATTGCAAAGATTAACAATCGGTTCAAGAGAGAAGATGCAGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCATCTTCGTGGATGAAGAAGGTCGAGGTACGTGATTTGAAATTGAAAATGGCGATTTCTGTTTGAAGTAATGCGTTGTGTTAGTTGATAGATTGATTCAATAATTAATTGCTCTACTTTGTTTTTCAAGGTCATTCATGATCAATTAGTTATTGCATGAGTGTGTGGTTGAACATGTGAATGTTTTTTTCAATCTGATTCACTTTTTAACCACAACTTTCCTTCCTATTTCATTATACTTTTTCACCTTTTCAATATTCTATTTCTCTCTCTAAAATCTGAGTAAAAAACACGTTTAGTTTTACTGTCCTTTTTTGAAAAATTCCTTGGTTGATTCTTCAATACAAGTCTAGATTCATTTGAAACCTAACGCATCATCTACTACAAGAAGTGAAAATCACTTTTGATTTCTAAATTTTTTTTGTGAAACTAATAGTGTGCTTCTGGAATTTTAGAACAATTTAGTTTTAAACTCAGCTGTTCACTTTAAATTCTGCCACACTTTGTTTATTATAGTGAAACATATTATTCGAATCATTAATTTGATACCAAATGTGTTAAGAAACTATGTTACCTAATAAACAAAATTAACACTTAATTTAGATAAGAGTTTTCATAGTAGATGATTAAGTTAAAATAAAAATAACATGATGATTCATACATTATGAATGGGATGAAGTGAGAATTTGAATATGTGCAGAGGAGGTTGGAAGAGAGGAGAGCAAAAGCGCTTGAAAAGATGGAGAATGAAGTAGCGAAGGCGCGCAGAAAAGCAGAGGAAAGAAGAGCATCGGCTGAGGCCAAGAGGGGAACAAAAGTTGCGAAGGTCATTGAAATATCAAACCTGATGAGAGCAGTTGGAAGGCCACCAGCCAAGCGCTCCTTCTTCTGAATTCCTCTCTCTTTTGATCAGAGCAGTTGGAATTCGTCTCTCTTTGTAATTAATTAAGGAGATGGATAATCAAAACCCTCCGAAAACAGTTTTACATTTTTCTTTTACTTGAAAGAACAAAGGAAAGCTATATTATACATCCTCTCTACCAAGATCAAATCTTGGTTTCTAGTTGGTTTTAGTTTAAGAACTTGTAAGTAAGAAATGGGCAATTAGTCTATGTGTTTATACAAGTTTGTCTTTACCAGACTTCTCTTAGTTGTTAATCATCTTTTTGCATAGTAATAGATATATATATAGTTGAATTATATACTTAATTTCT

mRNA sequence

AATCTATTTTAAAAATAAAAAGAATAGTGAGAGGGGGAAAAAACAAAGAGAGAAAAAAGAAATTAATGAAGAAAAGTAAAATAATAATGTTGATATTTTTTATTGGAAATGTGTTCCACGTAATACATTTTGTGGCTAATAATTCCCAAATTTCAAATCAAACAAACTATTCATTTTGGAATTATATTCTCAAAGGGACTCTCTCTCTTTCCCCTTCCTTCACTCAAAATCTTCTCATTACTCATAAAAACACTCTCTGCATTTCTTCAATTCCCACCATGTTCAACGATCAAGCACTACCAGCAGGAACCTCCAGACCTACTCATGCCGGAGACGGTGAAGATCAAATCCGCGAAATCCACGCTCTGACTCCCACACCACCACCGCCGGTGACGGAGAATCGGAACCGCCGCGGAGAGGCTTGGGAAACGGCGAGCCAGAGATCGACTTCAATGGCGAGCGAAGGCGCTTCCAGTGAGAATTTTACTTCCATAAGTAGAGAGTTCAATGCTCTGGTAATCGCCGGCGCGGAGATCGGCGACGGTTATCGCCAGGACCGGCCGATTAACGAACCTCCGAATAACTTGAGCAGGATTGGAGAGGAAGATCAGGCTACGCCTGAGGAGGAGACGAATCCGTTGGCGATCGTACCGGACGGTCATCCGTTTGATGATCAATTAACGCTGTCGTCAATCACGAGACAGGAGAACAGTAGCGGCGGAGGAGCAGCAGCGACAAGAGAGATTTCGTTGCAGATGGTGAAGAAGGAGGAGGTGGAGACGAAGATTAGCGCATGGCAGAACGCGAAGATTGCAAAGATTAACAATCGGTTCAAGAGAGAAGATGCAGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCATCTTCGTGGATGAAGAAGGTCGAGAGGAGGTTGGAAGAGAGGAGAGCAAAAGCGCTTGAAAAGATGGAGAATGAAGTAGCGAAGGCGCGCAGAAAAGCAGAGGAAAGAAGAGCATCGGCTGAGGCCAAGAGGGGAACAAAAGTTGCGAAGGTCATTGAAATATCAAACCTGATGAGAGCAGTTGGAAGGCCACCAGCCAAGCGCTCCTTCTTCTGAATTCCTCTCTCTTTTGATCAGAGCAGTTGGAATTCGTCTCTCTTTGTAATTAATTAAGGAGATGGATAATCAAAACCCTCCGAAAACAGTTTTACATTTTTCTTTTACTTGAAAGAACAAAGGAAAGCTATATTATACATCCTCTCTACCAAGATCAAATCTTGGTTTCTAGTTGGTTTTAGTTTAAGAACTTGTAAGTAAGAAATGGGCAATTAGTCTATGTGTTTATACAAGTTTGTCTTTACCAGACTTCTCTTAGTTGTTAATCATCTTTTTGCATAGTAATAGATATATATATAGTTGAATTATATACTTAATTTCT

Coding sequence (CDS)

ATGAAGAAAAGTAAAATAATAATGTTGATATTTTTTATTGGAAATGTGTTCCACGTAATACATTTTGTGGCTAATAATTCCCAAATTTCAAATCAAACAAACTATTCATTTTGGAATTATATTCTCAAAGGGACTCTCTCTCTTTCCCCTTCCTTCACTCAAAATCTTCTCATTACTCATAAAAACACTCTCTGCATTTCTTCAATTCCCACCATGTTCAACGATCAAGCACTACCAGCAGGAACCTCCAGACCTACTCATGCCGGAGACGGTGAAGATCAAATCCGCGAAATCCACGCTCTGACTCCCACACCACCACCGCCGGTGACGGAGAATCGGAACCGCCGCGGAGAGGCTTGGGAAACGGCGAGCCAGAGATCGACTTCAATGGCGAGCGAAGGCGCTTCCAGTGAGAATTTTACTTCCATAAGTAGAGAGTTCAATGCTCTGGTAATCGCCGGCGCGGAGATCGGCGACGGTTATCGCCAGGACCGGCCGATTAACGAACCTCCGAATAACTTGAGCAGGATTGGAGAGGAAGATCAGGCTACGCCTGAGGAGGAGACGAATCCGTTGGCGATCGTACCGGACGGTCATCCGTTTGATGATCAATTAACGCTGTCGTCAATCACGAGACAGGAGAACAGTAGCGGCGGAGGAGCAGCAGCGACAAGAGAGATTTCGTTGCAGATGGTGAAGAAGGAGGAGGTGGAGACGAAGATTAGCGCATGGCAGAACGCGAAGATTGCAAAGATTAACAATCGGTTCAAGAGAGAAGATGCAGTGATCAGTGGATGGGAGAGGGAGCAGGTTCAGAAGGCATCTTCGTGGATGAAGAAGGTCGAGAGGAGGTTGGAAGAGAGGAGAGCAAAAGCGCTTGAAAAGATGGAGAATGAAGTAGCGAAGGCGCGCAGAAAAGCAGAGGAAAGAAGAGCATCGGCTGAGGCCAAGAGGGGAACAAAAGTTGCGAAGGTCATTGAAATATCAAACCTGATGAGAGCAGTTGGAAGGCCACCAGCCAAGCGCTCCTTCTTCTGA

Protein sequence

MKKSKIIMLIFFIGNVFHVIHFVANNSQISNQTNYSFWNYILKGTLSLSPSFTQNLLITHKNTLCISSIPTMFNDQALPAGTSRPTHAGDGEDQIREIHALTPTPPPPVTENRNRRGEAWETASQRSTSMASEGASSENFTSISREFNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPEEETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF

Homology

[Close]

BLAST of Cp4.1LG08g13480 vs. Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-10
Identity = 48/148 (32.43%), Postives = 85/148 (57.43%), Query Frame = 1


Query: 196 PDGHPFDDQLTLSSITR--QENSSGGGAAAT--REISLQMVKKEEVETKISAWQNAKIAK 255
           P    FDD   L+ + +  +E +    A+A+  R++ L  + KE+  + + AW+ ++ +K
Sbjct: 58  PPEQIFDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSK 117

Query: 256 INNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERR 315
             N+ +++ A +  WE  +     + +KK+E +LE+++A+  E+M+N+VA   ++AEERR
Sbjct: 118 AENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERR 177

Query: 316 ASAEAKRGTKVAKVIEISNLMRAVGRPP 340
           A  EAKRG  V K  E +   RA G  P
Sbjct: 178 AMIEAKRGEDVLKAEETAAKYRATGIVP 205

[Close]

BLAST of Cp4.1LG08g13480 vs. Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 54/175 (30.86%), Postives = 96/175 (54.86%), Query Frame = 1


Query: 166 PINEP-PNNLSRIGEEDQATPEEETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAAT 225
           P  EP P  +    E+    P  E+  LA+V    P ++       T ++ SSG   +A 
Sbjct: 20  PAKEPTPAPVEVADEKIHNPPPVESKALAVVEK--PIEEH------TPKKASSG---SAD 79

Query: 226 REISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERR 285
           R++ L  ++KE+  + I AW+ ++ +K  NR +++ + +  WE  +     + ++K+E +
Sbjct: 80  RDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEK 139

Query: 286 LEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPP 340
           LE+++A+  EKM+N+VA   + AEE+RA  EAK+G ++ K  E+    RA G  P
Sbjct: 140 LEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVP 183

[Close]

BLAST of Cp4.1LG08g13480 vs. Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-09
Identity = 40/117 (34.19%), Postives = 70/117 (59.83%), Query Frame = 1


Query: 225 REISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERR 284
           R+  L  V  E+  + I AW+ ++ +K  N+ +++ + I  WE  +     + +KK+E +
Sbjct: 77  RDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQ 136

Query: 285 LEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAK 342
           LE+++A+  EKM+N++A   ++AEE+RA  EAKRG  + K  E++   RA G  P K
Sbjct: 137 LEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKK 193

[Close]

BLAST of Cp4.1LG08g13480 vs. TrEMBL
Match: A0A0A0LBJ6_CUCSA (Remorin OS=Cucumis sativus GN=Csa_3G816080 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 7.1e-111
Identity = 232/278 (83.45%), Postives = 243/278 (87.41%), Query Frame = 1


Query: 72  MFNDQALPAGTSRPTHAG-DGED-QIREIHALTPTPPPPVTENRNRRGEA-WETASQRST 131
           MFNDQ  P  TS   HAG D ED QIR+IHALT   PPPV  NRNRRGEA WET SQRST
Sbjct: 1   MFNDQP-PPSTSTAAHAGEDNEDVQIRDIHALTSPQPPPVNANRNRRGEANWETTSQRST 60

Query: 132 SMASEGASS-ENFTSISREFNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPEE 191
           S+ SE +SS ENFTS+SREFNALVIAGAEIGDGYR DR INE PNNLSRIGEE+  TPE 
Sbjct: 61  SIVSEASSSSENFTSMSREFNALVIAGAEIGDGYRHDRSINEAPNNLSRIGEEEDTTPEV 120

Query: 192 ETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKKEEVETKISAWQNA 251
           ETNPLAIVPDGHPFDD  T S+I+R EN  G GAAATREISL MVKKEEVETKISAWQNA
Sbjct: 121 ETNPLAIVPDGHPFDDLTTSSAISRTENRDG-GAAATREISLHMVKKEEVETKISAWQNA 180

Query: 252 KIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKA 311
           KIAKINNR+KREDAVISGWEREQVQKASSWMKK+ER+LEE+RAKALEKMENEVAKA RKA
Sbjct: 181 KIAKINNRYKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKA 240

Query: 312 EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF
Sbjct: 241 EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 276

[Close]

BLAST of Cp4.1LG08g13480 vs. TrEMBL
Match: E5GBY5_CUCME (Remorin OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 3.9e-109
Identity = 228/279 (81.72%), Postives = 242/279 (86.74%), Query Frame = 1


Query: 72  MFNDQALPA--GTSRPTHAGDGED-QIREIHALTPTPPPPVTENRNRRGEA-WETASQRS 131
           MFNDQ  P+    + P    D ED QIR+IHALT   PPPVT NRNRRGEA WET SQRS
Sbjct: 1   MFNDQPPPSTSAAAAPHAEEDNEDVQIRDIHALTSPQPPPVTANRNRRGEANWETTSQRS 60

Query: 132 TSMASEGASS-ENFTSISREFNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPE 191
            S+ASE +SS ENFTS+SREFNALVIAGAEIGDGYR DR INE PNNLSRIGEE+  TPE
Sbjct: 61  ASIASEASSSSENFTSMSREFNALVIAGAEIGDGYRHDRSINEAPNNLSRIGEEEDTTPE 120

Query: 192 EETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKKEEVETKISAWQN 251
            ETNPLAIVPDGHPFDD LT S+I+R   +  GGAAATREISL MVKKEEVETKISAWQN
Sbjct: 121 VETNPLAIVPDGHPFDD-LTTSAISRATENRDGGAAATREISLHMVKKEEVETKISAWQN 180

Query: 252 AKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRK 311
           AKIAKINNR+KREDAVISGWEREQVQKASSWMKK+ER+LEE+RAKALEKMENEVAKA RK
Sbjct: 181 AKIAKINNRYKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRK 240

Query: 312 AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF
Sbjct: 241 AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 278

[Close]

BLAST of Cp4.1LG08g13480 vs. TrEMBL
Match: A0A068VG41_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004146001 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.0e-77
Identity = 180/276 (65.22%), Postives = 211/276 (76.45%), Query Frame = 1


Query: 74  NDQALPAGTSRPTHAGDGEDQIREIHALTPTPPPPVTENRNRRGEAWETASQRSTS--MA 133
           NDQ   A TSR       +D IR+IHALTP  PP  + NR+R    WET S RS+S  MA
Sbjct: 2   NDQRTIATTSRDEEQEPEDDHIRDIHALTPPRPP--SANRSR---PWETNSHRSSSLSMA 61

Query: 134 SEGASSENFTSISREFNALVIAGAEIGD-GYRQDRPINEPPNNLSRIGEEDQATPEEETN 193
           SEGASSENF+S+SREFNALV+AG+ I + G   D  +N   NNL RIGEE+     EETN
Sbjct: 62  SEGASSENFSSMSREFNALVLAGSTIANNGSEVDGTVNSSNNNLGRIGEEEIP---EETN 121

Query: 194 PLAIVPDGHPFDDQLTLSSITRQENSSGGGAAAT-REISLQMVKKEEVETKISAWQNAKI 253
           PLAIVPD HP      L+S  R+E +S   A    RE+S+Q VKKEEVE+KI+AWQ AK+
Sbjct: 122 PLAIVPDPHPLGP---LTSSPRREGASESLAHGNHREVSIQRVKKEEVESKINAWQTAKV 181

Query: 254 AKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEE 313
           AK+NNRFKREDA+ISGWE EQVQKA+SWMKKVER+LEE+RAKALEKMEN++AKARRKAEE
Sbjct: 182 AKVNNRFKREDAIISGWETEQVQKANSWMKKVERKLEEKRAKALEKMENDIAKARRKAEE 241

Query: 314 RRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           RRASAE KRGTKVAK++E++NLMRAVGR P KRSFF
Sbjct: 242 RRASAEGKRGTKVAKILEVANLMRAVGRAPVKRSFF 266

[Close]

BLAST of Cp4.1LG08g13480 vs. TrEMBL
Match: A0A059DIW0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02379 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 7.5e-76
Identity = 170/261 (65.13%), Postives = 195/261 (74.71%), Query Frame = 1


Query: 90  DGEDQIREIHALTPTPPPPVTENRNRRGEAWETASQ---RSTSMASEGASSENFTSISRE 149
           D E Q R+IHALTP  PPP   +  RR + WET S     S SM S+ ASSENFT++SRE
Sbjct: 23  DDEQQFRDIHALTPPRPPPPPPSSRRR-DPWETGSHGRSSSLSMGSDVASSENFTTMSRE 82

Query: 150 FNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPEEETNPLAIVPDGHPFDDQLT 209
           F+ALVIAG+ I              NNL+ IGEED  TP EETNPLAIVPD +P D+   
Sbjct: 83  FSALVIAGSAISTETEHGTSNGGNGNNLTMIGEEDDGTPVEETNPLAIVPDNNPLDEVRR 142

Query: 210 LSSITRQENSS--GGGAAATREISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVIS 269
             S  R+   S  GGG     ++++Q VKKEEVE KISAWQNAK+AKINNRFKREDAVI 
Sbjct: 143 SVSPPRRPGPSVAGGGGGPGDQVTVQRVKKEEVEAKISAWQNAKVAKINNRFKREDAVIG 202

Query: 270 GWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAK 329
           GWE EQV KASSWMKKVER+LEE+RAKALEKM+N++AKARRKAEERRASAEAKRGTK A+
Sbjct: 203 GWESEQVHKASSWMKKVERKLEEKRAKALEKMQNDIAKARRKAEERRASAEAKRGTKAAR 262

Query: 330 VIEISNLMRAVGRPPAKRSFF 346
           V+EI+NLMRAVGR PAKRSFF
Sbjct: 263 VLEIANLMRAVGRAPAKRSFF 282

[Close]

BLAST of Cp4.1LG08g13480 vs. TrEMBL
Match: A0A067K1A1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21068 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.8e-75
Identity = 175/284 (61.62%), Postives = 209/284 (73.59%), Query Frame = 1


Query: 79  PAGTSRPTHAGDGEDQ----IREIHALTPTPPPPVTENRNRRGEAWETASQRSTSMASEG 138
           P  ++  +H     DQ    IR+IHALTP PPP V   R      WET S RS SM+SEG
Sbjct: 7   PTTSTSTSHGETDHDQEHEDIRDIHALTPPPPPSVPRGR------WETGSHRSISMSSEG 66

Query: 139 ASSENFTSISREFNALVIAGAEIGDG---------YRQDRPINEPPNNLSRIGEEDQATP 198
           A+SENFTS+SREFNALV+AG+ IG           + +D  +N   N L+RIGE++    
Sbjct: 67  AASENFTSMSREFNALVLAGSAIGTSMNNNNSGSDHNEDSNLN---NLLARIGEDEVP-- 126

Query: 199 EEETNPLAIVPDGHPFDDQLTLSSITRQENS----SGGGAAATREISLQMVKKEEVETKI 258
            EETNPLAIVPD  P D + + SS     N     +GGG A   ++S+Q VKKEE+ETKI
Sbjct: 127 -EETNPLAIVPDTRPLDPEPSSSSRRVGSNQVVVGAGGGGA---DVSVQRVKKEEIETKI 186

Query: 259 SAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVA 318
           SAWQNAKIAKINNRFKREDA+I+GWE EQVQK+SSWMKKVER+LEE+RA+ALEKM+NEVA
Sbjct: 187 SAWQNAKIAKINNRFKREDAIINGWESEQVQKSSSWMKKVERKLEEKRARALEKMQNEVA 246

Query: 319 KARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           KA +KAE+RRASAEAKRGTKVA+V+EI+NLMRAVGR PAKRSFF
Sbjct: 247 KAHKKAEDRRASAEAKRGTKVARVLEIANLMRAVGRAPAKRSFF 275

[Close]

BLAST of Cp4.1LG08g13480 vs. TAIR10
Match: AT2G41870.1 (AT2G41870.1 Remorin family protein)

HSP 1 Score: 229.2 bits (583), Expect = 3.9e-60
Identity = 149/291 (51.20%), Postives = 186/291 (63.92%), Query Frame = 1


Query: 71  TMFNDQALPAGTSRPTHAGDGEDQIREIHALTPTP------------PPPVTENRNRRGE 130
           T+++ +  P  TS        E  +RE+HALTP P            PPP          
Sbjct: 3   TLYHQERSPDATSNDRDETP-ETVVREVHALTPAPEDNSRTMTATLPPPPAFRGY----- 62

Query: 131 AWETASQRSTSMASEGASSENFTSISREFNALVIAGAEIGDGYRQDRPI----NEPPNNL 190
               +  RS +  SEG   ENFT+ISREFNALVIAG+ + +     R +    +E  + L
Sbjct: 63  ---FSPPRSATTMSEG---ENFTTISREFNALVIAGSSMENNELMTRDVTQREDERQDEL 122

Query: 191 SRIGEEDQATPEEETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKK 250
            RI E+     EEETNPLAIVPD +P               S  G   +    ++Q VK+
Sbjct: 123 MRIHED--TDHEEETNPLAIVPDQYP--------GSGLDPGSDNGPGQSRVGSTVQRVKR 182

Query: 251 EEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALE 310
           EEVE KI+AWQ AK+AKINNRFKREDAVI+GW  EQV KA+SWMKK+ER+LEER+AKA+E
Sbjct: 183 EEVEAKITAWQTAKLAKINNRFKREDAVINGWFNEQVNKANSWMKKIERKLEERKAKAME 242

Query: 311 KMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           K +N VAKA+RKAEERRA+AEAKRGT+VAKV+E++NLMRA+GRPPAKRSFF
Sbjct: 243 KTQNNVAKAQRKAEERRATAEAKRGTEVAKVVEVANLMRALGRPPAKRSFF 271

[Close]

BLAST of Cp4.1LG08g13480 vs. TAIR10
Match: AT3G57540.1 (AT3G57540.1 Remorin family protein)

HSP 1 Score: 228.8 bits (582), Expect = 5.1e-60
Identity = 148/298 (49.66%), Postives = 195/298 (65.44%), Query Frame = 1


Query: 71  TMFNDQALPAG-TSRPTHAGDGEDQ-------IREIHALTPTPPPPVTENRNRRGEAWET 130
           T++  +  P   T+  T A D  D+       +R+IHA+T T    +T  + R       
Sbjct: 3   TLYGQERSPENSTTSTTDASDRRDETPSSEIVVRDIHAMTTTTE--LTRPQQRGSGGGYL 62

Query: 131 ASQRSTSMASEGASS-ENFTSISREFNALVIAGAEIGD---------GYRQDRPINEPPN 190
           +  RS + +    SS ENFT++SREFNALVIAG+ + +         G+R    I +  N
Sbjct: 63  SPSRSIAFSDGTTSSGENFTTVSREFNALVIAGSSMDNNSNGTNQSGGHRD--VIRDERN 122

Query: 191 NLSRIGEEDQA-----TPEEETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREI 250
            L+RIGE D        PEE++NP AIVPD +   D    + +     SSGG        
Sbjct: 123 ELTRIGENDDVGDHGQVPEEDSNPWAIVPDDYNNRDGSENNIVLA---SSGGQNRMVTTA 182

Query: 251 SLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEE 310
           S+Q VK+EEVE KI+AWQ AK+AKINNRFKR+DAVI+GW  EQV +A+SWMKK+ER+LE+
Sbjct: 183 SVQRVKREEVEAKITAWQTAKVAKINNRFKRQDAVINGWLNEQVHRANSWMKKIERKLED 242

Query: 311 RRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           RRAKA+EK +N+VAKA+RKAEERRA+AE KRGT+VA+V+E++NLMRAVGRPPAKRSFF
Sbjct: 243 RRAKAMEKTQNKVAKAQRKAEERRATAEGKRGTEVARVLEVANLMRAVGRPPAKRSFF 293

[Close]

BLAST of Cp4.1LG08g13480 vs. TAIR10
Match: AT5G23750.1 (AT5G23750.1 Remorin family protein)

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-12
Identity = 47/166 (28.31%), Postives = 90/166 (54.22%), Query Frame = 1


Query: 181 DQATPEEETNPLAIVPDGHPF-----DDQLTLSSITRQENSSGGGAAATREISLQMVKKE 240
           D A  E+   P  ++P   P      D +  +  + ++        +  R+  L  V+ E
Sbjct: 32  DVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKEVEEEKKEGSVNRDAVLARVETE 91

Query: 241 EVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEK 300
           +  + I AW+ A+  K+ N+ +++ + I  WE  +     + +KK+E +LE+++A+ +E+
Sbjct: 92  KRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKAEYVEQ 151

Query: 301 MENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAK 342
           M+N++A+  ++AEE+RA  EAKRG ++ K  E++   RA G  P K
Sbjct: 152 MKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKK 197

[Close]

BLAST of Cp4.1LG08g13480 vs. TAIR10
Match: AT1G67590.1 (AT1G67590.1 Remorin family protein)

HSP 1 Score: 69.3 bits (168), Expect = 5.2e-12
Identity = 59/191 (30.89%), Postives = 92/191 (48.17%), Query Frame = 1


Query: 167 INEPPNNLSRIGEEDQ---ATPEEETNPLAIVPDGHPFDDQL----------TLSSITRQ 226
           + +    ++ IG ++    ATP   T P+   P   P               T++ + R 
Sbjct: 149 VRDMGTEMTPIGSQEPSRTATPVRATTPVGRSPVTSPVRASQRGEAVGVVMETVTEVRRV 208

Query: 227 ENSSGGGAAATREISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVISGWEREQVQK 286
           E+++        E    M     +E +  AW  A+ AK   R+KRE+  I  WE  + +K
Sbjct: 209 ESNNSEKVNGFVESKKAM---SAMEARAMAWDEAERAKFMARYKREEVKIQAWENHEKRK 268

Query: 287 ASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAKVIEISNLMR 345
           A   MKK+E + E  +A+A EK+ N++A  +R AEERRA+AEAK   K  K  E ++ +R
Sbjct: 269 AEMEMKKMEVKAERMKARAEEKLANKLAATKRIAEERRANAEAKLNEKAVKTSEKADYIR 328

[Close]

BLAST of Cp4.1LG08g13480 vs. TAIR10
Match: AT3G61260.1 (AT3G61260.1 Remorin family protein)

HSP 1 Score: 67.8 bits (164), Expect = 1.5e-11
Identity = 48/148 (32.43%), Postives = 85/148 (57.43%), Query Frame = 1


Query: 196 PDGHPFDDQLTLSSITR--QENSSGGGAAAT--REISLQMVKKEEVETKISAWQNAKIAK 255
           P    FDD   L+ + +  +E +    A+A+  R++ L  + KE+  + + AW+ ++ +K
Sbjct: 58  PPEQIFDDSKALTVVEKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSK 117

Query: 256 INNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERR 315
             N+ +++ A +  WE  +     + +KK+E +LE+++A+  E+M+N+VA   ++AEERR
Sbjct: 118 AENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERR 177

Query: 316 ASAEAKRGTKVAKVIEISNLMRAVGRPP 340
           A  EAKRG  V K  E +   RA G  P
Sbjct: 178 AMIEAKRGEDVLKAEETAAKYRATGIVP 205

[Close]

BLAST of Cp4.1LG08g13480 vs. NCBI nr
Match: gi|449437674|ref|XP_004136616.1| (PREDICTED: remorin [Cucumis sativus])

HSP 1 Score: 408.7 bits (1049), Expect = 1.0e-110
Identity = 232/278 (83.45%), Postives = 243/278 (87.41%), Query Frame = 1


Query: 72  MFNDQALPAGTSRPTHAG-DGED-QIREIHALTPTPPPPVTENRNRRGEA-WETASQRST 131
           MFNDQ  P  TS   HAG D ED QIR+IHALT   PPPV  NRNRRGEA WET SQRST
Sbjct: 1   MFNDQP-PPSTSTAAHAGEDNEDVQIRDIHALTSPQPPPVNANRNRRGEANWETTSQRST 60

Query: 132 SMASEGASS-ENFTSISREFNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPEE 191
           S+ SE +SS ENFTS+SREFNALVIAGAEIGDGYR DR INE PNNLSRIGEE+  TPE 
Sbjct: 61  SIVSEASSSSENFTSMSREFNALVIAGAEIGDGYRHDRSINEAPNNLSRIGEEEDTTPEV 120

Query: 192 ETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKKEEVETKISAWQNA 251
           ETNPLAIVPDGHPFDD  T S+I+R EN  G GAAATREISL MVKKEEVETKISAWQNA
Sbjct: 121 ETNPLAIVPDGHPFDDLTTSSAISRTENRDG-GAAATREISLHMVKKEEVETKISAWQNA 180

Query: 252 KIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKA 311
           KIAKINNR+KREDAVISGWEREQVQKASSWMKK+ER+LEE+RAKALEKMENEVAKA RKA
Sbjct: 181 KIAKINNRYKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRKA 240

Query: 312 EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF
Sbjct: 241 EERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 276

[Close]

BLAST of Cp4.1LG08g13480 vs. NCBI nr
Match: gi|659085011|ref|XP_008443194.1| (PREDICTED: remorin [Cucumis melo])

HSP 1 Score: 402.9 bits (1034), Expect = 5.6e-109
Identity = 228/279 (81.72%), Postives = 242/279 (86.74%), Query Frame = 1


Query: 72  MFNDQALPA--GTSRPTHAGDGED-QIREIHALTPTPPPPVTENRNRRGEA-WETASQRS 131
           MFNDQ  P+    + P    D ED QIR+IHALT   PPPVT NRNRRGEA WET SQRS
Sbjct: 1   MFNDQPPPSTSAAAAPHAEEDNEDVQIRDIHALTSPQPPPVTANRNRRGEANWETTSQRS 60

Query: 132 TSMASEGASS-ENFTSISREFNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPE 191
            S+ASE +SS ENFTS+SREFNALVIAGAEIGDGYR DR INE PNNLSRIGEE+  TPE
Sbjct: 61  ASIASEASSSSENFTSMSREFNALVIAGAEIGDGYRHDRSINEAPNNLSRIGEEEDTTPE 120

Query: 192 EETNPLAIVPDGHPFDDQLTLSSITRQENSSGGGAAATREISLQMVKKEEVETKISAWQN 251
            ETNPLAIVPDGHPFDD LT S+I+R   +  GGAAATREISL MVKKEEVETKISAWQN
Sbjct: 121 VETNPLAIVPDGHPFDD-LTTSAISRATENRDGGAAATREISLHMVKKEEVETKISAWQN 180

Query: 252 AKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRK 311
           AKIAKINNR+KREDAVISGWEREQVQKASSWMKK+ER+LEE+RAKALEKMENEVAKA RK
Sbjct: 181 AKIAKINNRYKREDAVISGWEREQVQKASSWMKKIERKLEEKRAKALEKMENEVAKAHRK 240

Query: 312 AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF
Sbjct: 241 AEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 278

[Close]

BLAST of Cp4.1LG08g13480 vs. NCBI nr
Match: gi|661877530|emb|CDP18653.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 298.5 bits (763), Expect = 1.5e-77
Identity = 180/276 (65.22%), Postives = 211/276 (76.45%), Query Frame = 1


Query: 74  NDQALPAGTSRPTHAGDGEDQIREIHALTPTPPPPVTENRNRRGEAWETASQRSTS--MA 133
           NDQ   A TSR       +D IR+IHALTP  PP  + NR+R    WET S RS+S  MA
Sbjct: 2   NDQRTIATTSRDEEQEPEDDHIRDIHALTPPRPP--SANRSR---PWETNSHRSSSLSMA 61

Query: 134 SEGASSENFTSISREFNALVIAGAEIGD-GYRQDRPINEPPNNLSRIGEEDQATPEEETN 193
           SEGASSENF+S+SREFNALV+AG+ I + G   D  +N   NNL RIGEE+     EETN
Sbjct: 62  SEGASSENFSSMSREFNALVLAGSTIANNGSEVDGTVNSSNNNLGRIGEEEIP---EETN 121

Query: 194 PLAIVPDGHPFDDQLTLSSITRQENSSGGGAAAT-REISLQMVKKEEVETKISAWQNAKI 253
           PLAIVPD HP      L+S  R+E +S   A    RE+S+Q VKKEEVE+KI+AWQ AK+
Sbjct: 122 PLAIVPDPHPLGP---LTSSPRREGASESLAHGNHREVSIQRVKKEEVESKINAWQTAKV 181

Query: 254 AKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEE 313
           AK+NNRFKREDA+ISGWE EQVQKA+SWMKKVER+LEE+RAKALEKMEN++AKARRKAEE
Sbjct: 182 AKVNNRFKREDAIISGWETEQVQKANSWMKKVERKLEEKRAKALEKMENDIAKARRKAEE 241

Query: 314 RRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           RRASAE KRGTKVAK++E++NLMRAVGR P KRSFF
Sbjct: 242 RRASAEGKRGTKVAKILEVANLMRAVGRAPVKRSFF 266

[Close]

BLAST of Cp4.1LG08g13480 vs. NCBI nr
Match: gi|702247882|ref|XP_010057339.1| (PREDICTED: remorin [Eucalyptus grandis])

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 170/261 (65.13%), Postives = 195/261 (74.71%), Query Frame = 1


Query: 90  DGEDQIREIHALTPTPPPPVTENRNRRGEAWETASQ---RSTSMASEGASSENFTSISRE 149
           D E Q R+IHALTP  PPP   +  RR + WET S     S SM S+ ASSENFT++SRE
Sbjct: 23  DDEQQFRDIHALTPPRPPPPPPSSRRR-DPWETGSHGRSSSLSMGSDVASSENFTTMSRE 82

Query: 150 FNALVIAGAEIGDGYRQDRPINEPPNNLSRIGEEDQATPEEETNPLAIVPDGHPFDDQLT 209
           F+ALVIAG+ I              NNL+ IGEED  TP EETNPLAIVPD +P D+   
Sbjct: 83  FSALVIAGSAISTETEHGTSNGGNGNNLTMIGEEDDGTPVEETNPLAIVPDNNPLDEVRR 142

Query: 210 LSSITRQENSS--GGGAAATREISLQMVKKEEVETKISAWQNAKIAKINNRFKREDAVIS 269
             S  R+   S  GGG     ++++Q VKKEEVE KISAWQNAK+AKINNRFKREDAVI 
Sbjct: 143 SVSPPRRPGPSVAGGGGGPGDQVTVQRVKKEEVEAKISAWQNAKVAKINNRFKREDAVIG 202

Query: 270 GWEREQVQKASSWMKKVERRLEERRAKALEKMENEVAKARRKAEERRASAEAKRGTKVAK 329
           GWE EQV KASSWMKKVER+LEE+RAKALEKM+N++AKARRKAEERRASAEAKRGTK A+
Sbjct: 203 GWESEQVHKASSWMKKVERKLEEKRAKALEKMQNDIAKARRKAEERRASAEAKRGTKAAR 262

Query: 330 VIEISNLMRAVGRPPAKRSFF 346
           V+EI+NLMRAVGR PAKRSFF
Sbjct: 263 VLEIANLMRAVGRAPAKRSFF 282

[Close]

BLAST of Cp4.1LG08g13480 vs. NCBI nr
Match: gi|802727540|ref|XP_012086135.1| (PREDICTED: remorin-like [Jatropha curcas])

HSP 1 Score: 290.4 bits (742), Expect = 4.1e-75
Identity = 175/284 (61.62%), Postives = 209/284 (73.59%), Query Frame = 1


Query: 79  PAGTSRPTHAGDGEDQ----IREIHALTPTPPPPVTENRNRRGEAWETASQRSTSMASEG 138
           P  ++  +H     DQ    IR+IHALTP PPP V   R      WET S RS SM+SEG
Sbjct: 7   PTTSTSTSHGETDHDQEHEDIRDIHALTPPPPPSVPRGR------WETGSHRSISMSSEG 66

Query: 139 ASSENFTSISREFNALVIAGAEIGDG---------YRQDRPINEPPNNLSRIGEEDQATP 198
           A+SENFTS+SREFNALV+AG+ IG           + +D  +N   N L+RIGE++    
Sbjct: 67  AASENFTSMSREFNALVLAGSAIGTSMNNNNSGSDHNEDSNLN---NLLARIGEDEVP-- 126

Query: 199 EEETNPLAIVPDGHPFDDQLTLSSITRQENS----SGGGAAATREISLQMVKKEEVETKI 258
            EETNPLAIVPD  P D + + SS     N     +GGG A   ++S+Q VKKEE+ETKI
Sbjct: 127 -EETNPLAIVPDTRPLDPEPSSSSRRVGSNQVVVGAGGGGA---DVSVQRVKKEEIETKI 186

Query: 259 SAWQNAKIAKINNRFKREDAVISGWEREQVQKASSWMKKVERRLEERRAKALEKMENEVA 318
           SAWQNAKIAKINNRFKREDA+I+GWE EQVQK+SSWMKKVER+LEE+RA+ALEKM+NEVA
Sbjct: 187 SAWQNAKIAKINNRFKREDAIINGWESEQVQKSSSWMKKVERKLEEKRARALEKMQNEVA 246

Query: 319 KARRKAEERRASAEAKRGTKVAKVIEISNLMRAVGRPPAKRSFF 346
           KA +KAE+RRASAEAKRGTKVA+V+EI+NLMRAVGR PAKRSFF
Sbjct: 247 KAHKKAEDRRASAEAKRGTKVARVLEIANLMRAVGRAPAKRSFF 275

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g13480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y3126_ARATH	2.7e-10	32.43	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1	[more]
REMO_ARATH	1.0e-09	30.86	Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1	[more]
REMO_SOLTU	1.3e-09	34.19	Remorin OS=Solanum tuberosum PE=1 SV=1	[more]

BLAST of Cp4.1LG08g13480 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBJ6_CUCSA	7.1e-111	83.45	Remorin OS=Cucumis sativus GN=Csa_3G816080 PE=4 SV=1	[more]
E5GBY5_CUCME	3.9e-109	81.72	Remorin OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A068VG41_COFCA	1.0e-77	65.22	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00004146001 PE=4 SV=1	[more]
A0A059DIW0_EUCGR	7.5e-76	65.13	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02379 PE=4 SV=1	[more]
A0A067K1A1_JATCU	2.8e-75	61.62	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21068 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g13480 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G41870.1	3.9e-60	51.20	Remorin family protein	[more]
AT3G57540.1	5.1e-60	49.66	Remorin family protein	[more]
AT5G23750.1	1.4e-12	28.31	Remorin family protein	[more]
AT1G67590.1	5.2e-12	30.89	Remorin family protein	[more]
AT3G61260.1	1.5e-11	32.43	Remorin family protein	[more]

BLAST of Cp4.1LG08g13480 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449437674\|ref\|XP_004136616.1\|	1.0e-110	83.45	PREDICTED: remorin [Cucumis sativus]	[more]
gi\|659085011\|ref\|XP_008443194.1\|	5.6e-109	81.72	PREDICTED: remorin [Cucumis melo]	[more]
gi\|661877530\|emb\|CDP18653.1\|	1.5e-77	65.22	unnamed protein product [Coffea canephora]	[more]
gi\|702247882\|ref\|XP_010057339.1\|	1.1e-75	65.13	PREDICTED: remorin [Eucalyptus grandis]	[more]
gi\|802727540\|ref\|XP_012086135.1\|	4.1e-75	61.62	PREDICTED: remorin-like [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005516	Remorin_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g13480.1	Cp4.1LG08g13480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 236..340 score: 1.8
None	No IPR available	unknown	Coil	Coil	coord: 278..317 scor
None	No IPR available	PANTHER	PTHR31471	FAMILY NOT NAMED	coord: 92..345 score: 2.3
None	No IPR available	PANTHER	PTHR31471:SF14	SUBFAMILY NOT NAMED	coord: 92..345 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g13480	Cucsa.337370	Cucumber (Gy14) v1	cgycpeB0901
Cp4.1LG08g13480	CmaCh14G004760	Cucurbita maxima (Rimu)	cmacpeB297
Cp4.1LG08g13480	CmaCh06G000520	Cucurbita maxima (Rimu)	cmacpeB846
Cp4.1LG08g13480	CmoCh06G000430	Cucurbita moschata (Rifu)	cmocpeB794
Cp4.1LG08g13480	CmoCh14G004810	Cucurbita moschata (Rifu)	cmocpeB260
Cp4.1LG08g13480	Cla017458	Watermelon (97103) v1	cpewmB830
Cp4.1LG08g13480	Csa3G816080	Cucumber (Chinese Long) v2	cpecuB864
Cp4.1LG08g13480	MELO3C009714	Melon (DHL92) v3.5.1	cpemeB797
Cp4.1LG08g13480	ClCG10G016620	Watermelon (Charleston Gray)	cpewcgB767
Cp4.1LG08g13480	CSPI03G37370	Wild cucumber (PI 183967)	cpecpiB866
Cp4.1LG08g13480	Lsi03G016540	Bottle gourd (USVL1VR-Ls)	cpelsiB708
Cp4.1LG08g13480	MELO3C009714.2	Melon (DHL92) v3.6.1	cpemedB938
Cp4.1LG08g13480	CsaV3_3G039720	Cucumber (Chinese Long) v3	cpecucB1060
Cp4.1LG08g13480	Bhi11G002283	Wax gourd	cpewgoB1087
Cp4.1LG08g13480	CsGy3G034870	Cucumber (Gy14) v2	cgybcpeB457
Cp4.1LG08g13480	Carg03516	Silver-seed gourd	carcpeB0355
Cp4.1LG08g13480	Carg01274	Silver-seed gourd	carcpeB0234

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g13480	Cp4.1LG03g04130	Cucurbita pepo (Zucchini)	cpecpeB483

The following block(s) are covering this gene:

None