Cp4.1LG08g07470 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g07470
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionYbaK/aminoacyl-tRNA synthetase-associated domain
LocationCp4.1LG08 : 5927944 .. 5930599 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAATTGTCAAAAAGAAAGAAGGAAACTGCATTCATCCGAATTGGCCAATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTGCGTTTTGGAATCGGATTCTTTTTTTTGCAATTTCGATATGTGATTTTGTATTGACGATTTCGAGTGCGTATGTTGATTCCTTTTAGGCCTTTTTCATTAGTTACTTTTGGGTTTGAAGGAATGGGTAGAATTGGATTAATGAGAGGAAATGTTTGGATCGAATGATGGCGTTTATTAAAATGCCTCTCTTCCTGAAAAAATTATTTCAGGGTGGAACAGTATGGCCAATGATTTTGCACCATTTGAAACTTATTGGATGCGAGAGAACTAAAAAATGTATTTCAAATCTTTATTGAATGGTTATTAGAGGTAGACATTTTGAACCTGAATTCAACGGTCATTAGAGAGCAGTCAGTGGCTTATTCGTTGAATCTAGTCTTTTTTTTTCCCTTCCTGAGTTATAACACTGTTGGGGAGGGACAAACATTTTCAGCTAGTTGAAAATTAAAATGAATTGAACCAAGCATTTATGTTGTGCTTTATTCAAGTCCTTATGTAATCATACTTCCAATGTAATTAGTACTAGTTGAGATTCTAGTTTTCTGTAATGAAAATGACATCGCATTACATTACATTGTGATCATATATGCTCTCGAGAATTCCTATGTTTTATGCTGGGTTGCTTGAGACCATCTCTTTGGTGGCAAACACGGGGCTTTTTGATAGCATCATGGGATCTTTGTGAAAAGCTTTGGTGTTGAAGGAGGATTTGAGATGGAACTGAACTATATTTGTATGATTTTCTCGGAGCTTGTGCATTTTGTAGTTTTTTTTTACTCTTATATATAATTTTTTTCTGTGCTAATCGGAGAGTGTGTTACATTCTTGAAAGGTTTCTATTCATCCTTATGTTAAATGGATTGATTTGGGAAATTTTCATAAAAGAACCAAATAATTCTTACAATACACAAGTATTTTCAGCTTCCAAATAGTTCTCGGCTTAGGCGTTCAAGGATTTTACTTTTAACAAAGTAAAATTTCTCATCAACACTTGAAAGGAAGAGAAAGGAGGGAAAGAAAAGGCCTTACTTTGTTCCTTTTGCATATATGTTGATATAATTTGACAATTGTTAGATGTATGACTGCCAGTTTAAAGATGATAGAAAAATTTCATTGTTAGCTACTGTATGGCTTATGGCATCCATTTTTAATCGAATTTTGGTTGATAACAACTCGACATTTATATATATTATATACCATATACCATATCTAGAAGTTCAATTAGGACCTCTCCTTCCTAGGCCATGCTTTTGTAGATGCTAAAACGTAACTGGGATCGCGTGTACTTCTGTTTTGTACTGTCAGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGGTATGCCTTCCTTTCTAATTTTCTCTAAACAGTTTGATCTAATGACCTGTATTCTCCTCTTTTAAAACATAACATTTCTTTATGTAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTGTAAGTTTTCTATTATCCTATTGGTGATGCCTTAATGGTTCTAAATGTGGTAATCCAAATTTTTAGTTTACTTGATTCATTAATTGTTCATATATTCACATCCATGCTTTGATTAAGTTAAGTGAGAAGGAGATCACGACACGATTCAAGCACCATTACTTTGTGCATGCTTTGCTTAATATAGATGAAAGAACAAGAGGGGGCCATAAAAACCAAGACCAAACCAACCACGAGAAAAAATTACTGAAAAAAAAGGAAAAAGGAAAATCTCTAAACAAATTATACTTGAAATGCCAAGGGTAGGCACTGATGTTTCAGATACTATAGTGGCTTGAAGTTTTCTTATTCATGGTTTCCTATTTACACAGTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGTAAGAATGTTAATGTTTGACTTGATAAATTGTAGATTTGAAAATTTTCTAGCTCGAGCAACCCATATTTAAATCTTTATTCTGCATTTTTACATATATGCTTTAATTTTTAAAGATCCCATCCCGTAATCGATATGCTCGTTTCTTAATTTGCCCCTAAATTTTCGAAGTGGTACATGTTATTTTGTGCAAATGTGATGATGGCCAATTTTGTTGTAGGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG

mRNA sequence

TGAAAATTGTCAAAAAGAAAGAAGGAAACTGCATTCATCCGAATTGGCCAATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG

Coding sequence (CDS)

ATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG

Protein sequence

MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDIPGSSCLLLLDARLIL
Homology
[Close]
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match: A0A0A0L4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020620 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 7.1e-74
Identity = 148/194 (76.29%), Postives = 161/194 (82.99%), Query Frame = 1 

Query: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGD-TV 60
           MGTE+ AMAE+NSMEA                 L+L  LPNLDS PS + SD AD D TV
Sbjct: 1   MGTESEAMAEQNSMEAQ---------------NLDLKCLPNLDSPPSSVPSDGADDDDTV 60

Query: 61  SRLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVV 120
           +RLS IL TNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+DHLCKSIVLVNTQA SH+V
Sbjct: 61  ARLSAILTTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLCKSIVLVNTQAPSHIV 120

Query: 121 DCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYV 180
           DCS+RNNSKYY+VVVQY+AKFNAET+RSFLYSLNDGKI KKKFNLRLAPEEISA+LTGY 
Sbjct: 121 DCSDRNNSKYYIVVVQYTAKFNAETIRSFLYSLNDGKIAKKKFNLRLAPEEISAKLTGYE 179

Query: 181 HNAVTCIGMKTDIP 194
           HN VTCIGMKTDIP
Sbjct: 181 HNGVTCIGMKTDIP 179

[Close]
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match: A0A061G4P8_THECC (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 OS=Theobroma cacao GN=TCM_015994 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65
Identity = 131/184 (71.20%), Postives = 154/184 (83.70%), Query Frame = 1 

Query: 13  SMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVN 72
           ++ ALA+LE  QT I+ RI KLEL++LP  ++EP P SS   + D  +RLS ILR+N VN
Sbjct: 4   ALAALAELERVQTQILERISKLELSHLPQ-NAEPLPSSSPLTNDDVEARLSNILRSNGVN 63

Query: 73  DFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVV 132
           DF FKRV SDYYDWSLE+RRDVL AASV HLCKSIVLVNTQA S+V+DCS+RNNSKYYVV
Sbjct: 64  DFFFKRVSSDYYDWSLESRRDVLGAASVHHLCKSIVLVNTQAPSNVIDCSDRNNSKYYVV 123

Query: 133 VVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDI 192
           VVQY+A+FNAETV++FLY+LN GKI KKKFNLRL PEE S +LTGY HNAVTCIGM+TDI
Sbjct: 124 VVQYTARFNAETVKNFLYALNSGKISKKKFNLRLTPEETSIKLTGYEHNAVTCIGMQTDI 183

Query: 193 PGSS 197
           P S+
Sbjct: 184 PVSN 186

[Close]
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match: A0A061G599_THECC (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 OS=Theobroma cacao GN=TCM_015994 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.1e-65
Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 1 

Query: 13  SMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVN 72
           ++ ALA+LE  QT I+ RI KLEL++LP  ++EP P SS   + D  +RLS ILR+N VN
Sbjct: 4   ALAALAELERVQTQILERISKLELSHLPQ-NAEPLPSSSPLTNDDVEARLSNILRSNGVN 63

Query: 73  DFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVV 132
           DF FKRV SDYYDWSLE+RRDVL AASV HLCKSIVLVNTQA S+V+DCS+RNNSKYYVV
Sbjct: 64  DFFFKRVSSDYYDWSLESRRDVLGAASVHHLCKSIVLVNTQAPSNVIDCSDRNNSKYYVV 123

Query: 133 VVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDI 192
           VVQY+A+FNAETV++FLY+LN GKI KKKFNLRL PEE S +LTGY HNAVTCIGM+TDI
Sbjct: 124 VVQYTARFNAETVKNFLYALNSGKISKKKFNLRLTPEETSIKLTGYEHNAVTCIGMQTDI 183

Query: 193 P 194
           P
Sbjct: 184 P 183

[Close]
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match: V7CFK4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G219500g PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64
Identity = 127/179 (70.95%), Postives = 151/179 (84.36%), Query Frame = 1 

Query: 15  EALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVNDF 74
           EALA+LE  QT ++ RI KL+ ++LP+  S+   +  D+A  DTVSRLS+IL TN V +F
Sbjct: 3   EALAELERVQTQLLQRISKLQHSHLPSSPSQNDTV--DDAGTDTVSRLSSILHTNGVPEF 62

Query: 75  SFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVVVV 134
           SFKRVPSDYYDW LEARRD L+AAS+ HLCKSIVLVNTQA ++VVDC+NRNNSKYYVVVV
Sbjct: 63  SFKRVPSDYYDWPLEARRDALSAASIHHLCKSIVLVNTQAPANVVDCTNRNNSKYYVVVV 122

Query: 135 QYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDIP 194
           QY+A+FNA+ V++FLYSLN+G I KKKFN+RLAPEE S ELTGY HNAVTCIGMKTDIP
Sbjct: 123 QYTARFNADAVKNFLYSLNNGSIAKKKFNMRLAPEETSMELTGYGHNAVTCIGMKTDIP 179

[Close]
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match: A0A0L9TQZ8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g215000 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 6.7e-64
Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 1 

Query: 15  EALAKLEYRQTLIINRILKLELAYLPNLDSEPSPI------SSDEADGDTVSRLSTILRT 74
           EALA+LE  QT ++ RI KLE +YLP+  S+   +      +  + D DTV+RLS+ILR+
Sbjct: 5   EALAELERVQTQLLQRISKLEHSYLPSSLSQNDTVHDAGTDTDTDTDTDTVARLSSILRS 64

Query: 75  NAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSK 134
           N V +FSFKRVPSDYYDW LEARRD L+AAS+ HLCKSIVLVNTQA ++VVDC+NRNNSK
Sbjct: 65  NGVPEFSFKRVPSDYYDWPLEARRDALSAASIHHLCKSIVLVNTQAPANVVDCTNRNNSK 124

Query: 135 YYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGM 194
           YYVVVVQY+A+FNAE V++FLYSLN+G I KKKFN+RLAPEE S ELTGY HNAVTCIGM
Sbjct: 125 YYVVVVQYTARFNAEAVKNFLYSLNNGSIAKKKFNMRLAPEETSMELTGYGHNAVTCIGM 184

[Close]
BLAST of Cp4.1LG08g07470 vs. TAIR10
Match: AT4G16510.1 (AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain)

HSP 1 Score: 235.3 bits (599), Expect = 3.3e-62
Identity = 123/188 (65.43%), Postives = 151/188 (80.32%), Query Frame = 1 

Query: 8   MAERNSME-ALAKLEYRQTLIINRILKLELAYLP-NLDSEPSPISSDEADGDTVSRLSTI 67
           M +   ME A A+LE  Q  I+++I  LE ++LP N  + PSP S    + +TV+RLSTI
Sbjct: 1   MDDGEGMETAAAELERLQIEILHKISILESSFLPQNSSAAPSP-SLPVDENETVTRLSTI 60

Query: 68  LRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRN 127
           L++  VNDF FKRV +DYYDW LE+RRDVL A+SVDHLCKSIVLVNTQA S+++DCS+ N
Sbjct: 61  LQSGGVNDFCFKRVATDYYDWPLESRRDVLGASSVDHLCKSIVLVNTQAASNILDCSDPN 120

Query: 128 NSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTC 187
           NSKYYVVVVQY+A+FNAE V+ FLYSLN+GKIPKK+FNLRLAPEE S +LTG+ HN VTC
Sbjct: 121 NSKYYVVVVQYTARFNAEAVKQFLYSLNEGKIPKKRFNLRLAPEETSIKLTGFEHNGVTC 180

Query: 188 IGMKTDIP 194
           IGMKT+IP
Sbjct: 181 IGMKTNIP 187

[Close]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match: gi|659095983|ref|XP_008448863.1| (PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo])

HSP 1 Score: 322.0 bits (824), Expect = 7.6e-85
Identity = 160/193 (82.90%), Postives = 176/193 (91.19%), Query Frame = 1 

Query: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVS 60
           MG+E+ AMAE+NSMEALAKLE+RQTLI++RI  LEL YLPNLDS PS + SD AD DTV+
Sbjct: 5   MGSESEAMAEQNSMEALAKLEHRQTLILHRISNLELKYLPNLDSPPSSVPSDGADDDTVA 64

Query: 61  RLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVD 120
           RLS ILRTNAVNDFSFKRVPSDYYDW+LEARRDVL+AAS+DHLCKSIVLVNTQA SHVVD
Sbjct: 65  RLSAILRTNAVNDFSFKRVPSDYYDWALEARRDVLDAASIDHLCKSIVLVNTQAPSHVVD 124

Query: 121 CSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVH 180
           CS+RNNSKYY+VVVQY+AKFNAE V+SFLYSLNDGKI KKKFNLRLAPEE S +LTGY H
Sbjct: 125 CSDRNNSKYYIVVVQYTAKFNAEAVKSFLYSLNDGKIAKKKFNLRLAPEETSVKLTGYEH 184

Query: 181 NAVTCIGMKTDIP 194
           N VTCIGMKTDIP
Sbjct: 185 NGVTCIGMKTDIP 197

[Close]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match: gi|449458934|ref|XP_004147201.1| (PREDICTED: uncharacterized protein LOC101218396 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 1.0e-73
Identity = 148/194 (76.29%), Postives = 161/194 (82.99%), Query Frame = 1 

Query: 1   MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGD-TV 60
           MGTE+ AMAE+NSMEA                 L+L  LPNLDS PS + SD AD D TV
Sbjct: 1   MGTESEAMAEQNSMEAQ---------------NLDLKCLPNLDSPPSSVPSDGADDDDTV 60

Query: 61  SRLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVV 120
           +RLS IL TNAVNDFSFKRVPSDYYDW LEARRDVL+AAS+DHLCKSIVLVNTQA SH+V
Sbjct: 61  ARLSAILTTNAVNDFSFKRVPSDYYDWPLEARRDVLDAASIDHLCKSIVLVNTQAPSHIV 120

Query: 121 DCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYV 180
           DCS+RNNSKYY+VVVQY+AKFNAET+RSFLYSLNDGKI KKKFNLRLAPEEISA+LTGY 
Sbjct: 121 DCSDRNNSKYYIVVVQYTAKFNAETIRSFLYSLNDGKIAKKKFNLRLAPEEISAKLTGYE 179

Query: 181 HNAVTCIGMKTDIP 194
           HN VTCIGMKTDIP
Sbjct: 181 HNGVTCIGMKTDIP 179

[Close]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match: gi|1009163966|ref|XP_015900246.1| (PREDICTED: uncharacterized protein LOC107433473 [Ziziphus jujuba])

HSP 1 Score: 259.2 bits (661), Expect = 6.0e-66
Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 1 

Query: 15  EALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSD----EADGDTVSRLSTILRTNA 74
           E+LA+LE  QT I+ RI  LEL++L N DS P P +SD    +A+ DT + LS ILRT+ 
Sbjct: 3   ESLAELERIQTRILQRISALELSHLHNPDSAPFPSTSDHSNYDAEADTEAHLSAILRTHG 62

Query: 75  VNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYY 134
           VNDFSFK+VP DYYDW LEARR+ L AASVDHLCKSIVLVNTQAQS++VDCS+  NSKYY
Sbjct: 63  VNDFSFKKVPGDYYDWPLEARREALAAASVDHLCKSIVLVNTQAQSNIVDCSDHRNSKYY 122

Query: 135 VVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKT 194
           VVVVQY+A+FNAETV++FLY LN+GKI KKKFNLRLAPEEIS +LTGY HNAVTCIGMKT
Sbjct: 123 VVVVQYTARFNAETVKNFLYLLNNGKIAKKKFNLRLAPEEISVKLTGYEHNAVTCIGMKT 182

[Close]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match: gi|590676926|ref|XP_007039877.1| (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 [Theobroma cacao])

HSP 1 Score: 256.5 bits (654), Expect = 3.9e-65
Identity = 131/184 (71.20%), Postives = 154/184 (83.70%), Query Frame = 1 

Query: 13  SMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVN 72
           ++ ALA+LE  QT I+ RI KLEL++LP  ++EP P SS   + D  +RLS ILR+N VN
Sbjct: 4   ALAALAELERVQTQILERISKLELSHLPQ-NAEPLPSSSPLTNDDVEARLSNILRSNGVN 63

Query: 73  DFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVV 132
           DF FKRV SDYYDWSLE+RRDVL AASV HLCKSIVLVNTQA S+V+DCS+RNNSKYYVV
Sbjct: 64  DFFFKRVSSDYYDWSLESRRDVLGAASVHHLCKSIVLVNTQAPSNVIDCSDRNNSKYYVV 123

Query: 133 VVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDI 192
           VVQY+A+FNAETV++FLY+LN GKI KKKFNLRL PEE S +LTGY HNAVTCIGM+TDI
Sbjct: 124 VVQYTARFNAETVKNFLYALNSGKISKKKFNLRLTPEETSIKLTGYEHNAVTCIGMQTDI 183

Query: 193 PGSS 197
           P S+
Sbjct: 184 PVSN 186

[Close]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match: gi|590676923|ref|XP_007039876.1| (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 [Theobroma cacao])

HSP 1 Score: 255.4 bits (651), Expect = 8.7e-65
Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 1 

Query: 13  SMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVN 72
           ++ ALA+LE  QT I+ RI KLEL++LP  ++EP P SS   + D  +RLS ILR+N VN
Sbjct: 4   ALAALAELERVQTQILERISKLELSHLPQ-NAEPLPSSSPLTNDDVEARLSNILRSNGVN 63

Query: 73  DFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVV 132
           DF FKRV SDYYDWSLE+RRDVL AASV HLCKSIVLVNTQA S+V+DCS+RNNSKYYVV
Sbjct: 64  DFFFKRVSSDYYDWSLESRRDVLGAASVHHLCKSIVLVNTQAPSNVIDCSDRNNSKYYVV 123

Query: 133 VVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDI 192
           VVQY+A+FNAETV++FLY+LN GKI KKKFNLRL PEE S +LTGY HNAVTCIGM+TDI
Sbjct: 124 VVQYTARFNAETVKNFLYALNSGKISKKKFNLRLTPEETSIKLTGYEHNAVTCIGMQTDI 183

Query: 193 P 194
           P
Sbjct: 184 P 183

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g07470 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g07470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4A0_CUCSA7.1e-7476.29Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020620 PE=4 SV=1[more]
A0A061G4P8_THECC2.7e-6571.20YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 OS=Theobroma cacao GN... [more]
A0A061G599_THECC6.1e-6571.82YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 OS=Theobroma cacao GN... [more]
V7CFK4_PHAVU3.9e-6470.95Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G219500g PE=4 SV=1[more]
A0A0L9TQZ8_PHAAN6.7e-6469.19Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g215000 PE=4 SV=1[more]
BLAST of Cp4.1LG08g07470 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G16510.13.3e-6265.43 YbaK/aminoacyl-tRNA synthetase-associated domain[more]
BLAST of Cp4.1LG08g07470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659095983|ref|XP_008448863.1|7.6e-8582.90PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo][more]
gi|449458934|ref|XP_004147201.1|1.0e-7376.29PREDICTED: uncharacterized protein LOC101218396 [Cucumis sativus][more]
gi|1009163966|ref|XP_015900246.1|6.0e-6672.13PREDICTED: uncharacterized protein LOC107433473 [Ziziphus jujuba][more]
gi|590676926|ref|XP_007039877.1|3.9e-6571.20YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 [Theobroma cacao][more]
gi|590676923|ref|XP_007039876.1|8.7e-6571.82YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0002161aminoacyl-tRNA editing activity
Vocabulary: INTERPRO
TermDefinition
IPR007214YbaK/aa-tRNA-synth-assoc-dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006450 regulation of translational fidelity
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0002161 aminoacyl-tRNA editing activity
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g07470.1Cp4.1LG08g07470.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainGENE3DG3DSA:3.90.960.10coord: 63..193
score: 7.2
IPR007214YbaK/aminoacyl-tRNA synthetase-associated domainunknownSSF55826YbaK/ProRS associated domaincoord: 74..193
score: 7.98
NoneNo IPR availablePANTHERPTHR30411UNCHARACTERIZEDcoord: 36..193
score: 1.1
NoneNo IPR availablePANTHERPTHR30411:SF4SUBFAMILY NOT NAMEDcoord: 36..193
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g07470Cucsa.320840Cucumber (Gy14) v1cgycpeB0857
Cp4.1LG08g07470CmaCh06G007770Cucurbita maxima (Rimu)cmacpeB852
Cp4.1LG08g07470CmoCh06G007970Cucurbita moschata (Rifu)cmocpeB797
Cp4.1LG08g07470Cla005650Watermelon (97103) v1cpewmB828
Cp4.1LG08g07470Csa3G020620Cucumber (Chinese Long) v2cpecuB850
Cp4.1LG08g07470MELO3C013948Melon (DHL92) v3.5.1cpemeB814
Cp4.1LG08g07470ClCG10G002780Watermelon (Charleston Gray)cpewcgB766
Cp4.1LG08g07470CSPI03G02780Wild cucumber (PI 183967)cpecpiB852
Cp4.1LG08g07470Lsi07G013080Bottle gourd (USVL1VR-Ls)cpelsiB721
Cp4.1LG08g07470MELO3C013948.2Melon (DHL92) v3.6.1cpemedB948
Cp4.1LG08g07470CsaV3_3G002820Cucumber (Chinese Long) v3cpecucB1047
Cp4.1LG08g07470Bhi11G000173Wax gourdcpewgoB1078
Cp4.1LG08g07470CsGy3G002710Cucumber (Gy14) v2cgybcpeB445
Cp4.1LG08g07470Carg25166Silver-seed gourdcarcpeB0750
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g07470Cucurbita pepo (Zucchini)cpecpeB230
Cp4.1LG08g07470Cucurbita pepo (Zucchini)cpecpeB250
Cp4.1LG08g07470Cucurbita pepo (Zucchini)cpecpeB508
Cp4.1LG08g07470Cucumber (Gy14) v1cgycpeB0796
Cp4.1LG08g07470Cucurbita maxima (Rimu)cmacpeB364
Cp4.1LG08g07470Cucurbita moschata (Rifu)cmocpeB328
Cp4.1LG08g07470Cucurbita moschata (Rifu)cmocpeB601
Cp4.1LG08g07470Wild cucumber (PI 183967)cpecpiB874
Cp4.1LG08g07470Cucumber (Chinese Long) v2cpecuB872
Cp4.1LG08g07470Watermelon (Charleston Gray)cpewcgB780
Cp4.1LG08g07470Watermelon (97103) v1cpewmB846
Cp4.1LG08g07470Melon (DHL92) v3.5.1cpemeB790
Cp4.1LG08g07470Cucumber (Gy14) v2cgybcpeB702
Cp4.1LG08g07470Melon (DHL92) v3.6.1cpemedB928
Cp4.1LG08g07470Cucumber (Chinese Long) v3cpecucB1070
Cp4.1LG08g07470Wax gourdcpewgoB1101