Cp4.1LG08g07470.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAATTGTCAAAAAGAAAGAAGGAAACTGCATTCATCCGAATTGGCCAATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTGCGTTTTGGAATCGGATTCTTTTTTTTGCAATTTCGATATGTGATTTTGTATTGACGATTTCGAGTGCGTATGTTGATTCCTTTTAGGCCTTTTTCATTAGTTACTTTTGGGTTTGAAGGAATGGGTAGAATTGGATTAATGAGAGGAAATGTTTGGATCGAATGATGGCGTTTATTAAAATGCCTCTCTTCCTGAAAAAATTATTTCAGGGTGGAACAGTATGGCCAATGATTTTGCACCATTTGAAACTTATTGGATGCGAGAGAACTAAAAAATGTATTTCAAATCTTTATTGAATGGTTATTAGAGGTAGACATTTTGAACCTGAATTCAACGGTCATTAGAGAGCAGTCAGTGGCTTATTCGTTGAATCTAGTCTTTTTTTTTCCCTTCCTGAGTTATAACACTGTTGGGGAGGGACAAACATTTTCAGCTAGTTGAAAATTAAAATGAATTGAACCAAGCATTTATGTTGTGCTTTATTCAAGTCCTTATGTAATCATACTTCCAATGTAATTAGTACTAGTTGAGATTCTAGTTTTCTGTAATGAAAATGACATCGCATTACATTACATTGTGATCATATATGCTCTCGAGAATTCCTATGTTTTATGCTGGGTTGCTTGAGACCATCTCTTTGGTGGCAAACACGGGGCTTTTTGATAGCATCATGGGATCTTTGTGAAAAGCTTTGGTGTTGAAGGAGGATTTGAGATGGAACTGAACTATATTTGTATGATTTTCTCGGAGCTTGTGCATTTTGTAGTTTTTTTTTACTCTTATATATAATTTTTTTCTGTGCTAATCGGAGAGTGTGTTACATTCTTGAAAGGTTTCTATTCATCCTTATGTTAAATGGATTGATTTGGGAAATTTTCATAAAAGAACCAAATAATTCTTACAATACACAAGTATTTTCAGCTTCCAAATAGTTCTCGGCTTAGGCGTTCAAGGATTTTACTTTTAACAAAGTAAAATTTCTCATCAACACTTGAAAGGAAGAGAAAGGAGGGAAAGAAAAGGCCTTACTTTGTTCCTTTTGCATATATGTTGATATAATTTGACAATTGTTAGATGTATGACTGCCAGTTTAAAGATGATAGAAAAATTTCATTGTTAGCTACTGTATGGCTTATGGCATCCATTTTTAATCGAATTTTGGTTGATAACAACTCGACATTTATATATATTATATACCATATACCATATCTAGAAGTTCAATTAGGACCTCTCCTTCCTAGGCCATGCTTTTGTAGATGCTAAAACGTAACTGGGATCGCGTGTACTTCTGTTTTGTACTGTCAGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGGTATGCCTTCCTTTCTAATTTTCTCTAAACAGTTTGATCTAATGACCTGTATTCTCCTCTTTTAAAACATAACATTTCTTTATGTAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTGTAAGTTTTCTATTATCCTATTGGTGATGCCTTAATGGTTCTAAATGTGGTAATCCAAATTTTTAGTTTACTTGATTCATTAATTGTTCATATATTCACATCCATGCTTTGATTAAGTTAAGTGAGAAGGAGATCACGACACGATTCAAGCACCATTACTTTGTGCATGCTTTGCTTAATATAGATGAAAGAACAAGAGGGGGCCATAAAAACCAAGACCAAACCAACCACGAGAAAAAATTACTGAAAAAAAAGGAAAAAGGAAAATCTCTAAACAAATTATACTTGAAATGCCAAGGGTAGGCACTGATGTTTCAGATACTATAGTGGCTTGAAGTTTTCTTATTCATGGTTTCCTATTTACACAGTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGTAAGAATGTTAATGTTTGACTTGATAAATTGTAGATTTGAAAATTTTCTAGCTCGAGCAACCCATATTTAAATCTTTATTCTGCATTTTTACATATATGCTTTAATTTTTAAAGATCCCATCCCGTAATCGATATGCTCGTTTCTTAATTTGCCCCTAAATTTTCGAAGTGGTACATGTTATTTTGTGCAAATGTGATGATGGCCAATTTTGTTGTAGGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG TGAAAATTGTCAAAAAGAAAGAAGGAAACTGCATTCATCCGAATTGGCCAATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG ATGGGGACCGAGGCTGGAGCAATGGCAGAGCGAAACTCCATGGAAGCACTAGCGAAGCTCGAATATCGCCAGACCCTAATCATCAATCGAATTTTGAAGCTGGAGCTCGCTTATCTTCCAAATCTCGACTCGGAACCTTCTCCAATTTCCTCTGATGAGGCAGATGGCGACACTGTGTCTCGACTCTCCACCATTCTTCGAACCAACGCTGTCAATGACTTCTCCTTCAAGAGGGTTCCCTCTGATTACTACGATTGGTCTCTCGAAGCCCGACGGGACGTTCTTAATGCCGCTTCGGTTGACCATCTCTGCAAGAGCATTGTTCTGGTAAATACTCAAGCCCAATCCCATGTCGTTGATTGCAGTAACCGCAACAATTCAAAATACTATGTTGTCGTTGTTCAGTATTCTGCTAAATTCAATGCTGAAACTGTTAGAAGCTTCCTGTATTCACTCAACGATGGAAAGATACCAAAAAAGAAATTCAACTTGAGACTTGCTCCAGAGGAGATATCTGCAGAGCTAACTGGATATGTGCATAATGCAGTGACATGCATTGGCATGAAAACGGATATTCCAGGTTCTTCTTGTCTTCTCTTGCTGGATGCAAGGCTAATTCTTTAG MGTEAGAMAERNSMEALAKLEYRQTLIINRILKLELAYLPNLDSEPSPISSDEADGDTVSRLSTILRTNAVNDFSFKRVPSDYYDWSLEARRDVLNAASVDHLCKSIVLVNTQAQSHVVDCSNRNNSKYYVVVVQYSAKFNAETVRSFLYSLNDGKIPKKKFNLRLAPEEISAELTGYVHNAVTCIGMKTDIPGSSCLLLLDARLIL
BLAST of Cp4.1LG08g07470.1 vs. TrEMBL
Match: A0A0A0L4A0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G020620 PE=4 SV=1) HSP 1 Score: 285.0 bits (728), Expect = 7.1e-74 Identity = 148/194 (76.29%), Postives = 161/194 (82.99%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. TrEMBL
Match: A0A061G4P8_THECC (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 OS=Theobroma cacao GN=TCM_015994 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 2.7e-65 Identity = 131/184 (71.20%), Postives = 154/184 (83.70%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. TrEMBL
Match: A0A061G599_THECC (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 OS=Theobroma cacao GN=TCM_015994 PE=4 SV=1) HSP 1 Score: 255.4 bits (651), Expect = 6.1e-65 Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. TrEMBL
Match: V7CFK4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G219500g PE=4 SV=1) HSP 1 Score: 252.7 bits (644), Expect = 3.9e-64 Identity = 127/179 (70.95%), Postives = 151/179 (84.36%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. TrEMBL
Match: A0A0L9TQZ8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g215000 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 6.7e-64 Identity = 128/185 (69.19%), Postives = 152/185 (82.16%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. TAIR10
Match: AT4G16510.1 (AT4G16510.1 YbaK/aminoacyl-tRNA synthetase-associated domain) HSP 1 Score: 235.3 bits (599), Expect = 3.3e-62 Identity = 123/188 (65.43%), Postives = 151/188 (80.32%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. NCBI nr
Match: gi|659095983|ref|XP_008448863.1| (PREDICTED: uncharacterized protein LOC103490895 [Cucumis melo]) HSP 1 Score: 322.0 bits (824), Expect = 7.6e-85 Identity = 160/193 (82.90%), Postives = 176/193 (91.19%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. NCBI nr
Match: gi|449458934|ref|XP_004147201.1| (PREDICTED: uncharacterized protein LOC101218396 [Cucumis sativus]) HSP 1 Score: 285.0 bits (728), Expect = 1.0e-73 Identity = 148/194 (76.29%), Postives = 161/194 (82.99%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. NCBI nr
Match: gi|1009163966|ref|XP_015900246.1| (PREDICTED: uncharacterized protein LOC107433473 [Ziziphus jujuba]) HSP 1 Score: 259.2 bits (661), Expect = 6.0e-66 Identity = 132/183 (72.13%), Postives = 153/183 (83.61%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. NCBI nr
Match: gi|590676926|ref|XP_007039877.1| (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 2 [Theobroma cacao]) HSP 1 Score: 256.5 bits (654), Expect = 3.9e-65 Identity = 131/184 (71.20%), Postives = 154/184 (83.70%), Query Frame = 1
BLAST of Cp4.1LG08g07470.1 vs. NCBI nr
Match: gi|590676923|ref|XP_007039876.1| (YbaK/aminoacyl-tRNA synthetase-associated domain isoform 1 [Theobroma cacao]) HSP 1 Score: 255.4 bits (651), Expect = 8.7e-65 Identity = 130/181 (71.82%), Postives = 152/181 (83.98%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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