Cp4.1LG08g06170 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g06170
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionNuclear transport factor 2
LocationCp4.1LG08 : 462927 .. 467955 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAATGGATAAAGCAACATAATAAAATTAAAATAAAATAAAAAAGAAAATGTTGTCATTATAAACGAGATCTCCTTCTTACTTGCCGTTTACGAATGTTCAAACTTCAACCAAAGTATTATTCAGCCGCCATTTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCAGAGATGATGGAAAGTTACCCAGATTTTCTCTCAGCTTCATCGTCTTCAACCTCCCTCTCTTTCCAGAAAATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCAGTTCCGGGAGGCGGCCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTACGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGACGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGGTAACCTAATTAGTCAATAATTATTTCTTAGCATTAAAATCAACGCCTTAAAAGTCAAATTTTATGGTTAAGTATTGAATAATACCTCCAATTATTAGTAGAAATGTCGTTTTAGAACCGTCGCAAATCATATAAACATTAAAAGAAAGAGTTGAGAGAGATTTCTCTCCATTAGCTAAATAAGATTGGGTACAGGGATTACATTTCCCGTGACCCTTACCACACTTCACTCTAATAGAGAAAAACAATCAAATTCTCGAAAAATTCTCGTATGGATCCCTATAAGAATAAATGAAAATTTTTGTGAGATTAGAGAATGAAATAGGAGTCAAGGACAGAGACGGGAAACCCTTACCATACTGCTCCCTAATAGAGAAAAATAACCCAATTCTCGAAAAATTCTCGTATGGATCCCTGTAAGAATAAATGAATTTTTTTATGAGAATAGAGAATGAAATAGGAGGCGGAGACGGGAAACCCTTACCACACTGCACCCTAATAGAGAAAAACAACCCAATTCTCGAAAATTTCTCGTATGGATCCCTGTAAGAATAAATGAATTTTTTTTGTGAGAATAGAGAATGAAATAGGAGGTGAGGGCAGAGACGGGAAACCCTTACCACACTTCACCCTAATAGAGAAAAACAACTCAATTCTCGGACAATTCTCGTTTGGATCCCTGTAAGAATAAATGAAATTTTTTGTGAGAATAGAGAATGAAATAGGAGGTGAGGACGGAGACGGAGAACCCTTACCGCAGTGCACCCTAATATAGTAAAACAACCCAATTCTCGAAAAATTCTCGTCTCGATCCCTATAAGAATAAATAATTTTTTTTGTGAGAATAGAGAATAAAATAAGAGGCGAGGACGGAGACTGGGAACCCTTACCACACTGCACCCTAATAGAGAAAAAAAAAAATCCAATTCTCGAAAATTTCTCGTCACGATCCCTATAAGAATAAATGTTTTTTTTTTCTTTTTGTGAGAATAGAGAACGAAATAGGAGGCGAAGACGGGGACGGGGACGGGGAACCCATATCACACTGCACCCTAATTGGGAAAGACGATCCAATCCTCGGGAAATTCTTGTCTCCAGAATAAATAGAAAATTTTGTGGGAATAGAGAATGAAATAGGAGGCGAGGACGGGAATGAGGACCTCCGGATCGTGTCTATTGAATTATGAATTATTTGTTTGGTATTATATGTTGTAAGAAAAGGGTTGGTTAATGAATTGCAGAAGCTACTATAAATGCACACACCAAGGGTGCAAAGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGAGTGGTGGTGACAACTTACGAAGGCATTCACTCTCATCCCATTCAGAAATCCACAGATAACTTCGAGCATATTTTGACCCAGATGCAAATTTACACTTCTTATTGATTATTTTACGAATATTTACTCATGTCAAATTTATTACATTTTTTCTATACATATAAACAAGTATTTATTTCAGAATGAGATCGAAATTGAGTAGTGCCACTTGCACGAGCGAAATGTTGTCTAGCGTTCGTATGGATGTGGGTCGCATTCACGAGTTGAAATTCTTTGCTCATGTCGATTGCAGAGTTAAAAGAGACTGGAGGATAGTACGAGGATGAGGAAGTGAGAGCGAACTGAGAGTAATACTAAATATGATTTGTATAAGAGAAAAAAAAAATTTAAAAAAAAATTCTATGGAATTTAAATATATTCATTTTGATTTTATATTAATTTTATAATATAAATAAATTATTAAAAATTTAAAAATTTTGAAACTAAATAATTATAAAATATAAAAACTAAACTGTTATACTTCCATTAAAATCTTAAAACGCAATTTTAGGATTCAAAATAAATTTAAACCTAAATTNTTAATCATAATAATTAAAATATATACATATATTAGAAAAGCCCCACCGAAGACCTTACCAAAAAAAGAAACGAACCGGACGGGTCTAACCCTCGATATTGTCGACATTATAAATTCCCAATTAACCCTCCATCTCTCGAACCCTCGGCTCAAGCTGTCGTATCCAGGTTTTTCTCTGTAAAACTCTGCGTCGTTCTCAAGCAGGGCGGAGAAAAGTTGGTGTTTTTGCAGTTTACCGGCGGCAGAATCGAACGTTATGGGGATGGATCCCGACGCGGTGGCTAAGGCATTTGTCGATCATTATTACTCCACCTTCGACGCCAATCGAGGCGGTCTTGCTAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCGCAGAATATTGTCGCCAAGCTCACTAGCCTTCCCTTCCAGCAGTGCCAACACTCCGTTAGCACTGTCGATTGCCAGCCTTCTGGCCCTAGCGGTGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGCCGGAGAACAGCATGCTCTCAAATTCAGTCAGGTAATGTGTTTTCTTATTGAAGATATTGCTTGATTTGTTGCGGTTTTGTGAGCCTTGTGGTTATTGATGTTGAATTTATGGATTGATCTTGGTTGGATCTTGTGTTCTCTTGGAGTTAGCCGATCGATCCTTGTTATAGAGTTTCCTTGACTGAATTGATGTTGTGATTCTCTAATTTATGCGTTTGTGCTCTTGAAGTATCATTAGGTTTTGGGTAATTTGCGTCGTATTTGTTCATCATGTAGATCTAGGGGTTTTCGTTAGGATTTTTTGTATCATATTGGGATAACGGTACTGTAGATCAAGCTTGAGACCGTGATATGCTTGTTTACTACTTTTTATTGTATTTGGTATTTGGCGGGTTCGGCATGTCTGAGATGATTCATGTTTTACTATTGGGTTCTTATTTTTTTAGAAGAAATCTCGTGGATTAAGTTCATTTGACCATCTTGCTGATTTATCAGCATGGGCCTAGTTAGAGAAAAAAAGGTACTTGATTATTTAACCCTGAAAAGTTAGTGCTAAACTGGTCCTTAATGGATGCTGCTTTTATCCGTGGGAATTTGTGAGGCGACTAAGAAAGTTCCCCTGCTGTTATGTTTGAATAAAAACGTTGCCTCGTCCCATGTGTCTTTCTTCTAGTATCTATGCATGTTATGACTTCTCTTCTAGCTTATCATGATGACATCTTTGAGAGAAAGTAATGACGCATTGAATCTGTGATCATGATCTATATTCTCATTGACTATTTGGTGGTACTTTTAGATATAAGTTCACGTGGGAATTCAAGAACATGTATTTACTCGTTCTTCATTTACCTTTTCTAATTCTATATATACCCAAATTGCTTATGGAATGGAATTTGTTTTAGAATGATGAATCATGAAAGCATTGTTAAAACAAATTATGGAATGATGGTATTTATGACGGTATATTTTATAGTCTGTGAATAACAATATTAGTGAATATGTATTGTGTTTAATATAATGAAATAGAACACACTGATGAATAGGTATTACTTTTCTTGTTTATCTCATTATGAAACAAATTCAATTATGTCGAGAACTTCTGGGAAGAAAGAATTTAGAATTTGTTAATATATGTGCAAGATTGGAAAAGAAGGCACAGTTTTTAATAGTTAACTACAGGACATGAACTTATGGCTGAACGTGAAAATCGAATTACGATATGAACAATTCTCTTTTTTGTTGTTAGCTGTGAATCCATGTTCTTTGTAGGATTTGGTTAGGTTGTTCAACTCTGTCCTTGAGTTTTAAAGGGCTTAAATTGCTTAGTAAATTATTCTAACCAAAATGTATTTACTTTGTGCTTTTAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGAAGTTGAGATTAGTTCATGGCATTGGGAGGCCTGAAATGTGAGGTTATTCAACCAGTTTGTTAATCACCCTTCAGTTTTTTTAGACATTTTAAATTGGAACTTGGATTATATCTTATCGTGCTTATGCTTCAAATTGTGTGCCTATGCAAGGTTGAATTTCTTGGTTGTCATTGAGAATTGATGAAGTAGATTACTTTGTTCAAATTCTAGTGATTTGCTCAATACTCTTCGAATTCAAGTGATGAAACAGTGTGTGTGCTTATTCGAATGCGAGTGCATTATATGCAATTATACCTGTGGAAAAAATAATGTTTTATACTCATTCATCACATAATGTTGAAAGAACTTCCACTACATGGAAATTGAAATATGAATGTTCAAAATAAAATTGATTCCACCACAACGGAATCAAACAATGGAGCATGTTGGTGATCGAATGGAAAGGACGTTCGATGTTGATCGAGTGAGAGAAAGCCAAGCTGAAGGTAAAGGCAATAGCTAAACGGGATCCCGAGCTTACAAGTACTTGCTTGTGGATGCTATAAAAAACGGGATCCCTCCATTTTAAGTAGGTAC

mRNA sequence

TTAATGGATAAAGCAACATAATAAAATTAAAATAAAATAAAAAAGAAAATGTTGTCATTATAAACGAGATCTCCTTCTTACTTGCCGTTTACGAATGTTCAAACTTCAACCAAAGTATTATTCAGCCGCCATTTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCAGAGATGATGGAAAGTTACCCAGATTTTCTCTCAGCTTCATCGTCTTCAACCTCCCTCTCTTTCCAGAAAATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCAGTTCCGGGAGGCGGCCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTACGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGACGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGGGCGGAGAAAAGTTGGTGTTTTTGCAGTTTACCGGCGGCAGAATCGAACGTTATGGGGATGGATCCCGACGCGGTGGCTAAGGCATTTGTCGATCATTATTACTCCACCTTCGACGCCAATCGAGGCGGTCTTGCTAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCGCAGAATATTGTCGCCAAGCTCACTAGCCTTCCCTTCCAGCAGTGCCAACACTCCGTTAGCACTGTCGATTGCCAGCCTTCTGGCCCTAGCGGTGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGCCGGAGAACAGCATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGAAGTTGAGATTAGTTCATGGCATTGGGAGGCCTGAAATGTGAGGTTATTCAACCAGTTTGTTAATCACCCTTCAGTTTTTTTAGACATTTTAAATTGGAACTTGGATTATATCTTATCGTGCTTATGCTTCAAATTGTGTGCCTATGCAAGGTTGAATTTCTTGGTTGTCATTGAGAATTGATGAAGTAGATTACTTTGTTCAAATTCTAGTGATTTGCTCAATACTCTTCGAATTCAAGTGATGAAACAGTGTGTGTGCTTATTCGAATGCGAGTGCATTATATGCAATTATACCTGTGGAAAAAATAATGTTTTATACTCATTCATCACATAATGTTGAAAGAACTTCCACTACATGGAAATTGAAATATGAATGTTCAAAATAAAATTGATTCCACCACAACGGAATCAAACAATGGAGCATGTTGGTGATCGAATGGAAAGGACGTTCGATGTTGATCGAGTGAGAGAAAGCCAAGCTGAAGGTAAAGGCAATAGCTAAACGGGATCCCGAGCTTACAAGTACTTGCTTGTGGATGCTATAAAAAACGGGATCCCTCCATTTTAAGTAGGTAC

Coding sequence (CDS)

ATGATGGAAAGTTACCCAGATTTTCTCTCAGCTTCATCGTCTTCAACCTCCCTCTCTTTCCAGAAAATGCTGATTTCTCGAGCTTCCGAGCCCACCGGAATCCATGGAAGTCAGTTCCGGGAGGCGGCCATCTCCGGTGGGTTTCCGTTGTTTCCCGACGTGTCGGGGAGCTACATGTCTGTGGGTACGAGGAGTAGTACGAAGGAAGATATGGTTTCGGTTAGTAAAGGGTCAGCGGTGGAGGTGGTGGAGGGAGGAGCGGAGACGACGGAGATGACGGCGGCGAGACAGGGAGATAATGATAAGAAAAAGAAGACGAGAAGCCGGAGATTTGCTTTTCAAACAAGGAGTCAAGTTGATATTCTTGATGATGGATATCGATGGAGAAAGTATGGACAGAAGGGTGTGAAGAACAACAAATTCCCAAGGGCGGAGAAAAGTTGGTGTTTTTGCAGTTTACCGGCGGCAGAATCGAACGTTATGGGGATGGATCCCGACGCGGTGGCTAAGGCATTTGTCGATCATTATTACTCCACCTTCGACGCCAATCGAGGCGGTCTTGCTAATCTCTACCAGGACAATTCCATGTTGACGTTTGAAGGTCAGAAGATCCAAGGCTCGCAGAATATTGTCGCCAAGCTCACTAGCCTTCCCTTCCAGCAGTGCCAACACTCCGTTAGCACTGTCGATTGCCAGCCTTCTGGCCCTAGCGGTGGCGTGCTCGTCTTCGTCAGCGGCAATCTTCAACTCGCCGGAGAACAGCATGCTCTCAAATTCAGTCAGATGTTCCATTTGATGCCAACCCCACAGGGAAGCTTCTATGTGCTGAATGACATTTTCCGATTGAACTATGCCTGA

Protein sequence

MMESYPDFLSASSSSTSLSFQKMLISRASEPTGIHGSQFREAAISGGFPLFPDVSGSYMSVGTRSSTKEDMVSVSKGSAVEVVEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFPRAEKSWCFCSLPAAESNVMGMDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNYA
Homology
[Close]
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match: NTF2_ARATH (Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 3.2e-57
Identity = 106/123 (86.18%), Postives = 115/123 (93.50%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAV+KAFV+HYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLTSLPFQQC
Sbjct: 4   MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           +H +STVDCQPSGP+ G+LVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIFRL
Sbjct: 64  KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIFRL 123

Query: 283 NYA 286
           NYA
Sbjct: 124 NYA 126

[Close]
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match: NTF2_ORYSJ (Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.4e-41
Identity = 81/122 (66.39%), Postives = 95/122 (77.87%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MD DAVAKAFV+HYY TFD NR  L +LYQD SMLTFEGQ+  G+  I  KL SLPF QC
Sbjct: 1   MDADAVAKAFVEHYYRTFDTNRPALVSLYQDGSMLTFEGQQFLGAAAIAGKLGSLPFAQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
            H ++TVDCQPSGP GG+LVFVSG+L+   ++H LKFSQMF L+P   G+FYV ND+FRL
Sbjct: 61  HHDINTVDCQPSGPQGGMLVFVSGSLRTGPDEHPLKFSQMFQLLPA-GGNFYVQNDMFRL 120

Query: 283 NY 285
           NY
Sbjct: 121 NY 121

[Close]
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match: NTF2_ASHGO (Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NTF2 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.4e-33
Identity = 68/125 (54.40%), Postives = 94/125 (75.20%), Query Frame = 1 

Query: 161 MGMDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQ 220
           M MD  A+A+ F + YY+ FD +R  L NLY+D SMLTFE  ++QG+++IV KL SLPFQ
Sbjct: 1   MSMDFSALAQQFTEFYYNQFDTDRSQLGNLYRDQSMLTFETSQLQGAKDIVEKLVSLPFQ 60

Query: 221 QCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 280
           + QH ++T+D QP+ P+G VLV ++G+L +  EQ+A +FSQ+FHLMP    S+YV NDIF
Sbjct: 61  KVQHRITTLDAQPASPNGDVLVMITGDLLIDDEQNAQRFSQVFHLMP-EGNSYYVFNDIF 120

Query: 281 RLNYA 286
           RLNY+
Sbjct: 121 RLNYS 124

[Close]
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match: NTF2_EMENI (Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ntf2 PE=3 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.6e-32
Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = 1 

Query: 164 DPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQ 223
           D  ++A+ FV  YY TFD NR GLA LY+D+SMLTFE   IQG   I+ KLTSLPFQ+ Q
Sbjct: 3   DFQSIAQQFVTFYYQTFDGNRAGLAPLYRDHSMLTFETSAIQGVAGIIEKLTSLPFQKVQ 62

Query: 224 HSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 283
           H VST+D QPSG  GG+LV V+G L +  E++ + ++Q F LMP   GS++VLND+FRL 
Sbjct: 63  HQVSTLDAQPSGEHGGILVLVTGALLVDEEKNPMNYTQTFQLMPDGAGSYFVLNDVFRLI 122

Query: 284 Y 285
           Y
Sbjct: 123 Y 123

[Close]
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match: NTF2_CANGA (Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NTF2 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31
Identity = 65/125 (52.00%), Postives = 94/125 (75.20%), Query Frame = 1 

Query: 161 MGMDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQ 220
           M MD +A+A+ F + YY+ FD++R  L NLY+D SMLTFE  ++QG+++IV KL SLPFQ
Sbjct: 1   MSMDFNALAQQFTEFYYNQFDSDRSQLGNLYRDESMLTFETSQLQGAKSIVEKLVSLPFQ 60

Query: 221 QCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 280
           +  H ++T+D QP+ P+G VLV ++G+L +  EQ+  +FSQ+FHL+P    S+YV NDIF
Sbjct: 61  KVAHRITTLDAQPASPNGDVLVMITGDLLIDDEQNPQRFSQVFHLIP-DGNSYYVFNDIF 120

Query: 281 RLNYA 286
           RLNY+
Sbjct: 121 RLNYS 124

[Close]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match: A0A059D9S7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03507 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.6e-60
Identity = 113/123 (91.87%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANRGGLANLYQ+ SMLTFEGQKIQGSQ+IV+KLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRGGLANLYQEGSMLTFEGQKIQGSQSIVSKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQ+FHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQLFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match: A0A067H2C0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033259mg PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.1e-60
Identity = 113/123 (91.87%), Postives = 121/123 (98.37%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPD+VAKAFV+HYY+TFDANR GLANLYQ+ SMLTFEGQKIQGSQNIVAKLTSLPFQQC
Sbjct: 1   MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match: A0A0A0KW20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012400 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.1e-60
Identity = 116/134 (86.57%), Postives = 122/134 (91.04%), Query Frame = 1 

Query: 152 SLPAAESNVMGMDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIV 211
           SL     N+  MDPDAVAKAFVDHYYSTFDANR  L NLYQDNSMLTFEGQKIQGS NIV
Sbjct: 40  SLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIV 99

Query: 212 AKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQG 271
           AKL+SLPFQQC+HSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQG
Sbjct: 100 AKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQG 159

Query: 272 SFYVLNDIFRLNYA 286
           SF+V NDIFRLNYA
Sbjct: 160 SFFVQNDIFRLNYA 173

[Close]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match: V4TN55_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033081mg PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.1e-60
Identity = 113/123 (91.87%), Postives = 121/123 (98.37%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPD+VAKAFV+HYY+TFDANR GLANLYQ+ SMLTFEGQKIQGSQNIVAKLTSLPFQQC
Sbjct: 1   MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match: A5BM29_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03790 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.8e-59
Identity = 113/123 (91.87%), Postives = 120/123 (97.56%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANR  LANLYQ++SMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match: AT1G27310.1 (AT1G27310.1 nuclear transport factor 2A)

HSP 1 Score: 215.7 bits (548), Expect = 3.7e-56
Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANR GL +LYQ+ SMLTFEGQKIQGSQNIVAKLT LPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRPGLVSLYQEGSMLTFEGQKIQGSQNIVAKLTGLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           +H+++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHL+ + QG++YV NDIFRL
Sbjct: 61  KHNITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLI-SNQGNYYVFNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 122

[Close]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match: AT1G27970.2 (AT1G27970.2 nuclear transport factor 2B)

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-55
Identity = 101/118 (85.59%), Postives = 110/118 (93.22%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAV+KAFV+HYYSTFD NR GLA LYQ+ SMLTFEGQKIQG Q+IVAKLTSLPFQQC
Sbjct: 4   MDPDAVSKAFVEHYYSTFDTNRVGLAGLYQEASMLTFEGQKIQGVQSIVAKLTSLPFQQC 63

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIF 281
           +H +STVDCQPSGP+ G+LVFVSGNLQLAGE+HALKFSQMFHLMPTPQGSFYV NDIF
Sbjct: 64  KHHISTVDCQPSGPASGMLVFVSGNLQLAGEEHALKFSQMFHLMPTPQGSFYVFNDIF 121

[Close]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match: AT1G11570.2 (AT1G11570.2 NTF2-like)

HSP 1 Score: 148.3 bits (373), Expect = 7.3e-36
Identity = 73/122 (59.84%), Postives = 88/122 (72.13%), Query Frame = 1 

Query: 166 DAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHS 225
           + VA AFV+HYY  FD +R  L++LY   S+LTFEGQ I G  NI  KL  LPF QC H 
Sbjct: 10  EEVASAFVNHYYHLFDNDRSSLSSLYNPTSLLTFEGQTIYGVDNISNKLKQLPFDQCHHL 69

Query: 226 VSTVDCQPS---GPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 285
           +STVD QPS   G  GG+LVFVSG++QL GE H L+FSQ FHL+P  QGSF+V N++FRL
Sbjct: 70  ISTVDSQPSSMAGGCGGILVFVSGSIQLHGEDHPLRFSQTFHLIPVLQGSFFVQNEMFRL 129

[Close]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match: AT5G13080.1 (AT5G13080.1 WRKY DNA-binding protein 75)

HSP 1 Score: 76.6 bits (187), Expect = 2.7e-14
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 1 

Query: 72  VSVSKGSAVEVVEGGAETTEMTA--ARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWR 131
           +S+   S  E+ +G  E++++ +    +     KKK + +R+AFQTRSQVDILDDGYRWR
Sbjct: 14  LSLKSHSKPELHQGEEESSKVRSEGCSKSVESSKKKGKKQRYAFQTRSQVDILDDGYRWR 73

Query: 132 KYGQKGVKNNKFPRA 145
           KYGQK VKNNKFPR+
Sbjct: 74  KYGQKAVKNNKFPRS 88

[Close]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match: AT3G01970.1 (AT3G01970.1 WRKY DNA-binding protein 45)

HSP 1 Score: 76.3 bits (186), Expect = 3.5e-14
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 83  VEGGAETTEMTAARQGDNDKKKKTRSRRFAFQTRSQVDILDDGYRWRKYGQKGVKNNKFP 142
           V+  A+ T  ++  +  + KKKK R  R+AFQTRSQVDILDDGYRWRKYGQK VKNN FP
Sbjct: 26  VDNSAQPTT-SSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFP 85

Query: 143 RA 145
           R+
Sbjct: 86  RS 86

[Close]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match: gi|747101535|ref|XP_011098902.1| (PREDICTED: nuclear transport factor 2-like [Sesamum indicum])

HSP 1 Score: 240.4 bits (612), Expect = 4.0e-60
Identity = 114/123 (92.68%), Postives = 120/123 (97.56%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANR GLANLYQD SMLTFEGQKI GSQNIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRAGLANLYQDGSMLTFEGQKIMGSQNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QH+++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHAITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match: gi|702278137|ref|XP_010044826.1| (PREDICTED: nuclear transport factor 2 [Eucalyptus grandis])

HSP 1 Score: 240.0 bits (611), Expect = 5.2e-60
Identity = 113/123 (91.87%), Postives = 122/123 (99.19%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANRGGLANLYQ+ SMLTFEGQKIQGSQ+IV+KLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRGGLANLYQEGSMLTFEGQKIQGSQSIVSKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQ+FHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQLFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match: gi|700197886|gb|KGN53044.1| (hypothetical protein Csa_4G012400 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 116/134 (86.57%), Postives = 122/134 (91.04%), Query Frame = 1 

Query: 152 SLPAAESNVMGMDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIV 211
           SL     N+  MDPDAVAKAFVDHYYSTFDANR  L NLYQDNSMLTFEGQKIQGS NIV
Sbjct: 40  SLTPPNFNLTRMDPDAVAKAFVDHYYSTFDANRANLGNLYQDNSMLTFEGQKIQGSPNIV 99

Query: 212 AKLTSLPFQQCQHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQG 271
           AKL+SLPFQQC+HSVSTVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQG
Sbjct: 100 AKLSSLPFQQCKHSVSTVDCQPSGPTGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQG 159

Query: 272 SFYVLNDIFRLNYA 286
           SF+V NDIFRLNYA
Sbjct: 160 SFFVQNDIFRLNYA 173

[Close]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match: gi|567890971|ref|XP_006438006.1| (hypothetical protein CICLE_v10033081mg [Citrus clementina])

HSP 1 Score: 238.8 bits (608), Expect = 1.2e-59
Identity = 113/123 (91.87%), Postives = 121/123 (98.37%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPD+VAKAFV+HYY+TFDANR GLANLYQ+ SMLTFEGQKIQGSQNIVAKLTSLPFQQC
Sbjct: 1   MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

[Close]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match: gi|225425388|ref|XP_002276841.1| (PREDICTED: nuclear transport factor 2 [Vitis vinifera])

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 113/123 (91.87%), Postives = 120/123 (97.56%), Query Frame = 1 

Query: 163 MDPDAVAKAFVDHYYSTFDANRGGLANLYQDNSMLTFEGQKIQGSQNIVAKLTSLPFQQC 222
           MDPDAVAKAFV+HYYSTFDANR  LANLYQ++SMLTFEGQKIQGS NIVAKLTSLPFQQC
Sbjct: 1   MDPDAVAKAFVEHYYSTFDANRANLANLYQESSMLTFEGQKIQGSPNIVAKLTSLPFQQC 60

Query: 223 QHSVSTVDCQPSGPSGGVLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 282
           QHS++TVDCQPSGP+GG+LVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL
Sbjct: 61  QHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 120

Query: 283 NYA 286
           NYA
Sbjct: 121 NYA 123

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g06170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NTF2_ARATH3.2e-5786.18Nuclear transport factor 2 OS=Arabidopsis thaliana GN=NTF2 PE=1 SV=1[more]
NTF2_ORYSJ5.4e-4166.39Nuclear transport factor 2 OS=Oryza sativa subsp. japonica GN=NTF2 PE=2 SV=1[more]
NTF2_ASHGO5.4e-3354.40Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / ... [more]
NTF2_EMENI4.6e-3256.20Nuclear transport factor 2 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /... [more]
NTF2_CANGA1.7e-3152.00Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM... [more]
BLAST of Cp4.1LG08g06170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059D9S7_EUCGR3.6e-6091.87Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03507 PE=4 SV=1[more]
A0A067H2C0_CITSI8.1e-6091.87Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033259mg PE=4 SV=1[more]
A0A0A0KW20_CUCSA8.1e-6086.57Uncharacterized protein OS=Cucumis sativus GN=Csa_4G012400 PE=4 SV=1[more]
V4TN55_9ROSI8.1e-6091.87Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033081mg PE=4 SV=1[more]
A5BM29_VITVI1.8e-5991.87Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03790 PE=4 SV=... [more]
BLAST of Cp4.1LG08g06170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27310.13.7e-5683.74 nuclear transport factor 2A[more]
AT1G27970.21.8e-5585.59 nuclear transport factor 2B[more]
AT1G11570.27.3e-3659.84 NTF2-like[more]
AT5G13080.12.7e-1453.33 WRKY DNA-binding protein 75[more]
AT3G01970.13.5e-1462.90 WRKY DNA-binding protein 45[more]
BLAST of Cp4.1LG08g06170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|747101535|ref|XP_011098902.1|4.0e-6092.68PREDICTED: nuclear transport factor 2-like [Sesamum indicum][more]
gi|702278137|ref|XP_010044826.1|5.2e-6091.87PREDICTED: nuclear transport factor 2 [Eucalyptus grandis][more]
gi|700197886|gb|KGN53044.1|1.2e-5986.57hypothetical protein Csa_4G012400 [Cucumis sativus][more]
gi|567890971|ref|XP_006438006.1|1.2e-5991.87hypothetical protein CICLE_v10033081mg [Citrus clementina][more]
gi|225425388|ref|XP_002276841.1|2.6e-5991.87PREDICTED: nuclear transport factor 2 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: INTERPRO
TermDefinition
IPR018222Nuclear_transport_factor_2_euk
IPR003657WRKY_dom
IPR002075NTF2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006891 intra-Golgi vesicle-mediated transport
biological_process GO:0006810 transport
biological_process GO:0010351 lithium ion transport
biological_process GO:0006606 protein import into nucleus
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
biological_process GO:0006869 lipid transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005635 nuclear envelope
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008536 Ran GTPase binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g06170.1Cp4.1LG08g06170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002075Nuclear transport factor 2PFAMPF02136NTF2coord: 168..282
score: 1.1
IPR003657WRKY domainGENE3DG3DSA:2.20.25.80coord: 107..144
score: 2.4
IPR003657WRKY domainPFAMPF03106WRKYcoord: 123..143
score: 4.
IPR003657WRKY domainSMARTSM00774WRKY_clscoord: 122..184
score: 1.
IPR003657WRKY domainPROFILEPS50811WRKYcoord: 117..144
score: 12
IPR003657WRKY domainunknownSSF118290WRKY DNA-binding domaincoord: 114..152
score: 7.32
IPR018222Nuclear transport factor 2, eukaryotePROFILEPS50177NTF2_DOMAINcoord: 168..282
score: 34
NoneNo IPR availablePANTHERPTHR12612NUCLEAR TRANSPORT FACTOR 2coord: 159..285
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g06170Cucsa.095080Cucumber (Gy14) v1cgycpeB0200
Cp4.1LG08g06170CmaCh14G014570Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g06170CmaCh06G016710Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g06170CmoCh06G016640Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g06170CmoCh14G014940Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g06170Cla010866Watermelon (97103) v1cpewmB840
Cp4.1LG08g06170Csa4G012400Cucumber (Chinese Long) v2cpecuB869
Cp4.1LG08g06170MELO3C017742Melon (DHL92) v3.5.1cpemeB817
Cp4.1LG08g06170ClCG07G015450Watermelon (Charleston Gray)cpewcgB791
Cp4.1LG08g06170CSPI04G03060Wild cucumber (PI 183967)cpecpiB871
Cp4.1LG08g06170Lsi07G000190Bottle gourd (USVL1VR-Ls)cpelsiB723
Cp4.1LG08g06170MELO3C017742.2Melon (DHL92) v3.6.1cpemedB955
Cp4.1LG08g06170CsaV3_4G003030Cucumber (Chinese Long) v3cpecucB1065
Cp4.1LG08g06170CsGy4G002930Cucumber (Gy14) v2cgybcpeB575
Cp4.1LG08g06170Carg06608Silver-seed gourdcarcpeB0178
Cp4.1LG08g06170Carg15462Silver-seed gourdcarcpeB0974
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g06170Cp4.1LG03g12920Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g06170Wax gourdcpewgoB1099
Cp4.1LG08g06170Cucumber (Gy14) v1cgycpeB0915
Cp4.1LG08g06170Cucurbita maxima (Rimu)cmacpeB409
Cp4.1LG08g06170Cucurbita moschata (Rifu)cmocpeB372
Cp4.1LG08g06170Wild cucumber (PI 183967)cpecpiB877
Cp4.1LG08g06170Cucumber (Chinese Long) v2cpecuB874
Cp4.1LG08g06170Watermelon (Charleston Gray)cpewcgB789
Cp4.1LG08g06170Melon (DHL92) v3.5.1cpemeB794
Cp4.1LG08g06170Silver-seed gourdcarcpeB0027
Cp4.1LG08g06170Cucumber (Chinese Long) v3cpecucB1075