Cp4.1LG08g04650 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g04650
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionF-box domain containing protein
LocationCp4.1LG08 : 1423303 .. 1426187 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGCGTGCAAGAACTTCCACGTGTGTTCCATCGTCAAAGCCATTCTCCACGAGTCCTCAACTTCAGCATACTCCGTTGGGAAGCAAGCTCGGTTAGGGATTCAGTACAATCGGTGGTTTTCCTTCTTCATTTTCTTTCTTCCCATGAAATCGATCGTTGCTGATCGTTCGAGGATTCTCCAGGTTAAATTTCGATTGATAATTTTGAGCGGAGAAAGAAGAAAATTGAGAGTAATCGAAAATGGGGTTGCTCCATCTTCCACTTGATGTTGCCCTGAAAATTGCTTCTTCTCTTCAGGTTCAAGCGGATTTTTGTATCATTCTGATCTTCTTATTTTACTTGAAGGTTCTTTGGGATTAATCGATTTTTCTCTGTGGATTTTGGGCTGTGATGAAGGCATCGGACATTTGTGCTTTGGGCTGTTGCTCGCGGTTATGTCGGGAACTTTTCGATTCCGATTGTTTGTGGGAGTCTCTTGCAAGAGAAAGATGGCCTTATATCTATGCTTCTTCATCTACTGGTTCTTCTTCGTCAACTCCCGCAAAATTCCCCATCTCCATGGTGCTCTTTTCATATCTTAATCTCTTTTTTTTTTTTTGGTCCTCGGTTAATTATTTACCATATTGGATTATCCATTTACATGGTTGCTATATTTAGGATTCTTGAAATCAATTGAGAGATTTGAAAGGTTGTTATTTTGTTCTTTCTGCTTCGTAATTCAAATGTAGCTGTCTCTATCTGAAATGGTTGATTATTTAGTGAAACATACGGCGGATATATCTTAGTTATTTCACCATCACTTGAAGTCATCTTCATGTTATTTCATTGGCCTTATGATCATCCTATGATGTGTTAAGTGTCTCATTCGTGAATTTACGTGTATTTCTTAGTTTCTTGAAAGCAATGAAGAGATTTGAAAAAAATGTTGTTCAATAGTTGAATGAGCCCTTTCGAATTTTCTTCATCCCTGTATGTAATGATTTGAACATACATTGGATATTTATCTTGAGTGGTCTTAAGTTGGATGTTGATCTTGAGTCTGTTGTTGAATTCATTGTTATAATTATGTTTGTGAACGAACAAAATGAAACGTCTTCCAGGGATGGAAAAGCTTTTACATCCTGAGGCATATTGAGATATTGGGAAGAGCCCAAGCAGCAGTCAAGTTTATAGAACAATGCCCTCCTTCGACACCGATTGAGGGTGGAGACTATCTCAGGACAATACTCGGCTTGCGGGATTTGAAGCTTAGTTTTATAGATGTTCAAATGGTGCTTTTCAAACCTCAACTTAACGGGCTGCTGAACTTGGTTGGCTTACACTACTGCACAAATTTGCTTGAAATCCCTGTACGTCTGCTGCTTTTTACCATTTTTGTTCAATCATTTGTAGGTTTATAATGTATTTTGGTTGTGAACTTTTATACTTATTCCATTTTGACCCCCTTAAATCTTCGAAGGCTCTATTTTCGTCCTGAACTTTGCACAAAAATTCATTTTTAGTCTCAGCTATTGTTTCCTCTGTAGCCATTTGTTCAGAACTCCAAATATATTTGGGAAATTTGACACTGTCCTAATATACATAGTTTCAAACTGTTGTTTACATGGACATTTTCTTGTCAAATAAGTAAATTAAAGACTTCGATGTTGGGTTTTTGTTAAATACTTTGTAAAGCTTTAATCACTGATTCTTTATGCTAAGTTTAAGGACTAAAGCAAGATAGGACAAGATTAAAAGCTTAGAGTCTTAAGTAGACAAGATTCTAGCTTATGATTTCATGGCCAAAGAACTTAGTGGTTAGAAAATGTTTTGAGTGATAAAACAAAATTTGTATAGATGAAAGACTGTTTCGGCATTCAAATTGTATAGGATCATTATTATGATTCCAGCTTATTTTGCGTATCATGTATCTGAACTCTGAAGTTGTTGATTTGACTTCGATTCCTGGCAGGCCTATCGAGTCATGGAAGCACTTCAAAGATGCAAGATCTCAGAGAAACATGTATGTGTGAAATGGTGGAAGCTAGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAACATACTCGTCGAGTCTCTCTGGCAGAACTGTTAACGGCAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTCCTGTTCATGAGGTGCTCCGGGTTCAAGTTTCTGTAAGTGATCCCTTTGACAGTCACTGATCTCAACAAAGCACACAAAAACACCCGTAGCATCTCTATAAGCATTCTGCAACTGCAATGACTTGTGTGCTACTAGTTGTTCATGTATATCAAATACTTGCTTGTAAATTCATGTAGATATAAATATGTAAAGTATGTATCTGCCATTCAGATTTGATTGATAAGTTGTCATTCACCAACGTATGCACATCAATATTTAGTGTATTGTGTGAATTATCAAAGGCGTTTGGGTCAATGTATTGGATTTTACAATCCCTTCATTTATCACTATCCGATTATACTTGGGCTTTCACCATTTCTACATACATTATACTAGTATCTCTTATTTCTATCTACCAAATATACATCCTTTATTTTCAGGTGTCTAGAACCTATCTTTTTGGACTTTCAAAATCGACATTTGGTTTCGAAACAAACGTCTTCCTAAACCTTTTATTCTTTGAACTCGAGGACATAGTAGTACAACCTATAGACAGATTCCATTCGATCAAGGTCGTCCTAAACTTTTAATTCTAAAGCATCAAACATCTGTCAAGAAACTTGATTTGTCTTCAAATAAGTAGGTTTTTGTTGGTGTTATTTTTGAATATGTTGGTTTGGTGCATTAGCTATTGCAGCTTCCTTTTGATACATACTTCAAGAGCTCCAGGAAAATGGTTGTAAATCAGAAGCGCATACCATAG

mRNA sequence

TAATGCGTGCAAGAACTTCCACGTGTGTTCCATCGTCAAAGCCATTCTCCACGAGTCCTCAACTTCAGCATACTCCGTTGGGAAGCAAGCTCGGTTAGGGATTCAGTACAATCGGTGGTTTTCCTTCTTCATTTTCTTTCTTCCCATGAAATCGATCGTTGCTGATCGTTCGAGGATTCTCCAGGTTAAATTTCGATTGATAATTTTGAGCGGAGAAAGAAGAAAATTGAGAGTAATCGAAAATGGGGTTGCTCCATCTTCCACTTGATGTTGCCCTGAAAATTGCTTCTTCTCTTCAGGCATCGGACATTTGTGCTTTGGGCTGTTGCTCGCGGTTATGTCGGGAACTTTTCGATTCCGATTGTTTGTGGGAGTCTCTTGCAAGAGAAAGATGGCCTTATATCTATGCTTCTTCATCTACTGGTTCTTCTTCGTCAACTCCCGCAAAATTCCCCATCTCCATGGGATGGAAAAGCTTTTACATCCTGAGGCATATTGAGATATTGGGAAGAGCCCAAGCAGCAGTCAAGTTTATAGAACAATGCCCTCCTTCGACACCGATTGAGGGTGGAGACTATCTCAGGACAATACTCGGCTTGCGGGATTTGAAGCTTAGTTTTATAGATGTTCAAATGGTGCTTTTCAAACCTCAACTTAACGGGCTGCTGAACTTGGTTGGCTTACACTACTGCACAAATTTGCTTGAAATCCCTGCCTATCGAGTCATGGAAGCACTTCAAAGATGCAAGATCTCAGAGAAACATGTATGTGTGAAATGGTGGAAGCTAGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAACATACTCGTCGAGTCTCTCTGGCAGAACTGTTAACGGCAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTCCTGTTCATGAGGTGCTCCGGGTTCAAGTTTCTCTATTGCAGCTTCCTTTTGATACATACTTCAAGAGCTCCAGGAAAATGGTTGTAAATCAGAAGCGCATACCATAG

Coding sequence (CDS)

ATGGGGTTGCTCCATCTTCCACTTGATGTTGCCCTGAAAATTGCTTCTTCTCTTCAGGCATCGGACATTTGTGCTTTGGGCTGTTGCTCGCGGTTATGTCGGGAACTTTTCGATTCCGATTGTTTGTGGGAGTCTCTTGCAAGAGAAAGATGGCCTTATATCTATGCTTCTTCATCTACTGGTTCTTCTTCGTCAACTCCCGCAAAATTCCCCATCTCCATGGGATGGAAAAGCTTTTACATCCTGAGGCATATTGAGATATTGGGAAGAGCCCAAGCAGCAGTCAAGTTTATAGAACAATGCCCTCCTTCGACACCGATTGAGGGTGGAGACTATCTCAGGACAATACTCGGCTTGCGGGATTTGAAGCTTAGTTTTATAGATGTTCAAATGGTGCTTTTCAAACCTCAACTTAACGGGCTGCTGAACTTGGTTGGCTTACACTACTGCACAAATTTGCTTGAAATCCCTGCCTATCGAGTCATGGAAGCACTTCAAAGATGCAAGATCTCAGAGAAACATGTATGTGTGAAATGGTGGAAGCTAGGAAGATGGTTTTATGGCTTCCGCATGAGAGACGAACAACATACTCGTCGAGTCTCTCTGGCAGAACTGTTAACGGCAGAAGGGGAAGACGTTCTTGGGGTGCTTAGCCGAGGTCCTGTTCATGAGGTGCTCCGGGTTCAAGTTTCTCTATTGCAGCTTCCTTTTGATACATACTTCAAGAGCTCCAGGAAAATGGTTGTAAATCAGAAGCGCATACCATAG

Protein sequence

MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSLLQLPFDTYFKSSRKMVVNQKRIP
Homology
[Close]
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match: A0A0A0L7T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151470 PE=4 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-101
Identity = 187/232 (80.60%), Postives = 202/232 (87.07%), Query Frame = 1 

Query: 1   MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
           MGL +L +D ALKIASSLQ SDIC+LGCCSR CR+L DSD LWESLARERWPYI      
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYI-----N 60

Query: 61  GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLR 120
           GSSSST A+  ISMGWKSFYI RHIEI GRAQAAVKF+EQC PSTPIEGGDYLRTI GL 
Sbjct: 61  GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120

Query: 121 DLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWW 180
           DLKLSF+D QMVLFKPQLN LLNLVGLHYC   L+IPA ++MEALQRCKI+E+H+CVKWW
Sbjct: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWW 180

Query: 181 KLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSL 233
           KLGRWFYGFRMRDEQ TRRVSLAEL+T EGEDVLGVLSRG VHEVLRVQVS+
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSV 227

[Close]
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match: W9SER4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008465 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69
Identity = 135/245 (55.10%), Postives = 173/245 (70.61%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPY---IYASSSTGS 65
           LP D+A+KIASSLQ SD+CALG CSR  REL  SDCLWESLA+ERWP+   +  + S+ S
Sbjct: 11  LPDDIAVKIASSLQVSDLCALGSCSRFWRELCKSDCLWESLAKERWPFQALLEENPSSSS 70

Query: 66  SSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDL 125
           SSS   + P+  GW+ FYI RH E+  R   AV F+EQ      +E GDYL+ I  L  +
Sbjct: 71  SSSIATEIPLFQGWRDFYIERHNEMASRVMEAVGFVEQSSRCESLEVGDYLKAIEVLDAM 130

Query: 126 KLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKL 185
           KL F DV+M+LF P+LN L NLVG+ YC + L +PA  V++ALQ  KIS++ VC++WWKL
Sbjct: 131 KLGFKDVEMLLFNPKLNSLPNLVGVQYCISWLGVPAEYVLQALQYRKISDRQVCIRWWKL 190

Query: 186 GRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSLLQLPFDTYFK 245
           GRWFYGFRMRDE H+  VSLA+L TA+ E+VLGVL RG VHEVLRVQ+S       +++ 
Sbjct: 191 GRWFYGFRMRDESHSHCVSLADLATAKAEEVLGVLYRGAVHEVLRVQISTADPSSASWYN 250

Query: 246 SSRKM 248
            S ++
Sbjct: 251 QSTQI 255

[Close]
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match: A0A067KV42_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02020 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.2e-67
Identity = 128/225 (56.89%), Postives = 158/225 (70.22%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSS 65
           LP D+ALKIAS L+  D+CALGCCSR   EL  SDCLWE L +ERWP     S +  S  
Sbjct: 13  LPFDIALKIASHLEVLDVCALGCCSRFWSELCRSDCLWEFLTKERWP-----SVSFISDF 72

Query: 66  TPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLS 125
           +P   P+  GW+  YI  H E+ G+A   ++F+E    S  +E GDY + I  L  ++L+
Sbjct: 73  SPCSVPVIKGWREIYIKMHREMAGKATTVIEFVEHRSLSQSLEIGDYNKAIQDLWLMRLA 132

Query: 126 FIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRW 185
           F D+QM LFKP LN LLNLVGLHYC   L++PA  VM+AL  CKISE+ VCV WWKLGRW
Sbjct: 133 FKDIQMFLFKPNLNVLLNLVGLHYCIFCLKLPARNVMDALLSCKISEREVCVNWWKLGRW 192

Query: 186 FYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQV 231
           FYGFRMRDE H+R+VSL +L T +GEDVLGVL RG +HEVLRV++
Sbjct: 193 FYGFRMRDESHSRKVSLTDLTTDKGEDVLGVLQRGAIHEVLRVEI 232

[Close]
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match: A0A067G666_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025624mg PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 2.1e-67
Identity = 130/228 (57.02%), Postives = 163/228 (71.49%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSS 65
           LP D+A KI S L+ S++CALGCCSR  R L  SDC+WESL+++RWP +   SS+  +S 
Sbjct: 12  LPEDIAFKIISFLEESEVCALGCCSRFWRNLCGSDCIWESLSKQRWPLLNNESSSVQNSD 71

Query: 66  TPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLS 125
                P S GW+ FY+ RHIEI+  A   VK +EQC  S  +E GDYL+ I  L  + L 
Sbjct: 72  -----PTSEGWRGFYMNRHIEIVNGATDVVKHVEQCTRSESLEVGDYLQAIEDLSTMHLG 131

Query: 126 FIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRW 185
           F DVQM LFKP+LN LL+LVGLHYC   L +P   V EAL+  KIS++ VC+KWWKLGRW
Sbjct: 132 FKDVQMFLFKPKLNVLLSLVGLHYCIFRLNVPPEYVAEALKSRKISDREVCIKWWKLGRW 191

Query: 186 FYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSLL 234
           FYGFRMRDE H+R VSLA+L+T + E+VLGVL RG +HEVLRVQ+S +
Sbjct: 192 FYGFRMRDEYHSRWVSLADLVTKKEEEVLGVLHRGAIHEVLRVQISFV 234

[Close]
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match: D7T6I9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01850 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-66
Identity = 132/227 (58.15%), Postives = 164/227 (72.25%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSS 65
           LP D+ALKIASSLQASD+C+LG CSR  REL+ SD +WE L R+RW        + +S  
Sbjct: 591 LPYDIALKIASSLQASDLCSLGSCSRSWRELWGSDPIWERLCRDRWSVQCMLGESSASEL 650

Query: 66  TPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLS 125
            P K     GWKSFYI  H E+ GRA   V+F+E    S  +E GD+L+ I+GLRD +L 
Sbjct: 651 HPPK----EGWKSFYIKWHHEMAGRATDVVRFVESRSSSESLEVGDHLKAIVGLRDRQLG 710

Query: 126 FIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRW 185
           F DVQ+ LFKP+LN L+NLVGL YC   L++PA  VMEA+Q CKISE+ VCVKWWKLGRW
Sbjct: 711 FKDVQIFLFKPKLNVLINLVGLQYCIQWLKVPAEHVMEAIQSCKISERQVCVKWWKLGRW 770

Query: 186 FYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSL 233
           FYGFR+RDE H RRVSL ++  A+ ++VL VL RG +HEVLRVQ+S+
Sbjct: 771 FYGFRLRDESHCRRVSLRDV--AKEDEVLWVLHRGAIHEVLRVQISI 811

[Close]
BLAST of Cp4.1LG08g04650 vs. TAIR10
Match: AT4G15563.1 (AT4G15563.1 unknown protein)

HSP 1 Score: 132.9 bits (333), Expect = 2.8e-31
Identity = 66/154 (42.86%), Postives = 99/154 (64.29%), Query Frame = 1 

Query: 82  LRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLSFIDVQMVLFKPQLNGL 141
           ++H E+  RA   +K++ + P +  +E G YL  +  +  ++  F DV++  FKP L+ L
Sbjct: 1   MQHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVL 60

Query: 142 LNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRWFYGFRMRDEQHTRRVS 201
           LNL+GL YC   L+    +V++ L++C ISE+ V VKW  LGRW  G RMRD+  +R+VS
Sbjct: 61  LNLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVS 120

Query: 202 LAELLTAEGEDVLGVLSRGPVHEVLRVQVSLLQL 236
           L +++T + E VL VL RG VHEVLRV +S + L
Sbjct: 121 LVDVVTGKEETVLRVLQRGVVHEVLRVCISTVDL 154

[Close]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match: gi|659076667|ref|XP_008438803.1| (PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo])

HSP 1 Score: 382.1 bits (980), Expect = 7.6e-103
Identity = 187/232 (80.60%), Postives = 203/232 (87.50%), Query Frame = 1 

Query: 1   MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
           MG  HLP D ALKIASSLQ S+IC+LGCCSR CR+L DSD LWESLARERWPYI      
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYI-----N 60

Query: 61  GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLR 120
           GSSSST A+ PISMGWKSFYI RHIEILGRAQAAVKF+EQC PSTPIEGGDYLRTI GL 
Sbjct: 61  GSSSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120

Query: 121 DLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWW 180
           DLKLSF+D QMVLFKPQLN LLNLVGLHYC   L++PA +++EALQRCKI+E+H+CVKWW
Sbjct: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWW 180

Query: 181 KLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSL 233
           KLGRWFYGFRMRDEQ TRRVSLAEL+T EGEDVLGVLSRG VHEVLRVQVS+
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSV 227

[Close]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match: gi|449432801|ref|XP_004134187.1| (PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus])

HSP 1 Score: 376.7 bits (966), Expect = 3.2e-101
Identity = 187/232 (80.60%), Postives = 202/232 (87.07%), Query Frame = 1 

Query: 1   MGLLHLPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSST 60
           MGL +L +D ALKIASSLQ SDIC+LGCCSR CR+L DSD LWESLARERWPYI      
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYI-----N 60

Query: 61  GSSSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLR 120
           GSSSST A+  ISMGWKSFYI RHIEI GRAQAAVKF+EQC PSTPIEGGDYLRTI GL 
Sbjct: 61  GSSSSTLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLW 120

Query: 121 DLKLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWW 180
           DLKLSF+D QMVLFKPQLN LLNLVGLHYC   L+IPA ++MEALQRCKI+E+H+CVKWW
Sbjct: 121 DLKLSFVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWW 180

Query: 181 KLGRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSL 233
           KLGRWFYGFRMRDEQ TRRVSLAEL+T EGEDVLGVLSRG VHEVLRVQVS+
Sbjct: 181 KLGRWFYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSV 227

[Close]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match: gi|703132014|ref|XP_010105024.1| (hypothetical protein L484_008465 [Morus notabilis])

HSP 1 Score: 270.4 bits (690), Expect = 3.2e-69
Identity = 135/245 (55.10%), Postives = 173/245 (70.61%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPY---IYASSSTGS 65
           LP D+A+KIASSLQ SD+CALG CSR  REL  SDCLWESLA+ERWP+   +  + S+ S
Sbjct: 11  LPDDIAVKIASSLQVSDLCALGSCSRFWRELCKSDCLWESLAKERWPFQALLEENPSSSS 70

Query: 66  SSSTPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDL 125
           SSS   + P+  GW+ FYI RH E+  R   AV F+EQ      +E GDYL+ I  L  +
Sbjct: 71  SSSIATEIPLFQGWRDFYIERHNEMASRVMEAVGFVEQSSRCESLEVGDYLKAIEVLDAM 130

Query: 126 KLSFIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKL 185
           KL F DV+M+LF P+LN L NLVG+ YC + L +PA  V++ALQ  KIS++ VC++WWKL
Sbjct: 131 KLGFKDVEMLLFNPKLNSLPNLVGVQYCISWLGVPAEYVLQALQYRKISDRQVCIRWWKL 190

Query: 186 GRWFYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSLLQLPFDTYFK 245
           GRWFYGFRMRDE H+  VSLA+L TA+ E+VLGVL RG VHEVLRVQ+S       +++ 
Sbjct: 191 GRWFYGFRMRDESHSHCVSLADLATAKAEEVLGVLYRGAVHEVLRVQISTADPSSASWYN 250

Query: 246 SSRKM 248
            S ++
Sbjct: 251 QSTQI 255

[Close]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match: gi|802578190|ref|XP_012069403.1| (PREDICTED: uncharacterized protein LOC105631825 [Jatropha curcas])

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 128/225 (56.89%), Postives = 158/225 (70.22%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSS 65
           LP D+ALKIAS L+  D+CALGCCSR   EL  SDCLWE L +ERWP     S +  S  
Sbjct: 13  LPFDIALKIASHLEVLDVCALGCCSRFWSELCRSDCLWEFLTKERWP-----SVSFISDF 72

Query: 66  TPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLS 125
           +P   P+  GW+  YI  H E+ G+A   ++F+E    S  +E GDY + I  L  ++L+
Sbjct: 73  SPCSVPVIKGWREIYIKMHREMAGKATTVIEFVEHRSLSQSLEIGDYNKAIQDLWLMRLA 132

Query: 126 FIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRW 185
           F D+QM LFKP LN LLNLVGLHYC   L++PA  VM+AL  CKISE+ VCV WWKLGRW
Sbjct: 133 FKDIQMFLFKPNLNVLLNLVGLHYCIFCLKLPARNVMDALLSCKISEREVCVNWWKLGRW 192

Query: 186 FYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQV 231
           FYGFRMRDE H+R+VSL +L T +GEDVLGVL RG +HEVLRV++
Sbjct: 193 FYGFRMRDESHSRKVSLTDLTTDKGEDVLGVLQRGAIHEVLRVEI 232

[Close]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match: gi|1009149863|ref|XP_015892706.1| (PREDICTED: uncharacterized protein LOC107426912 [Ziziphus jujuba])

HSP 1 Score: 264.6 bits (675), Expect = 1.8e-67
Identity = 128/236 (54.24%), Postives = 166/236 (70.34%), Query Frame = 1 

Query: 6   LPLDVALKIASSLQASDICALGCCSRLCRELFDSDCLWESLARERWPYIYASSSTGSSSS 65
           LP D+ALKIAS L+ SD+CALG CSR  + +  SDCLW+SL RERWP+   S  + SSSS
Sbjct: 11  LPDDIALKIASLLEVSDLCALGSCSRFWKGICGSDCLWKSLTRERWPFSDLSQGSSSSSS 70

Query: 66  TPAKFPISMGWKSFYILRHIEILGRAQAAVKFIEQCPPSTPIEGGDYLRTILGLRDLKLS 125
           T  + PIS GWKS+YI +H E+  R    V+F+ + P S  I+ GDYLR I  L  ++L 
Sbjct: 71  TSIEIPISKGWKSYYIKKHNEMADRVAEVVEFVRRSPTSESIQVGDYLRAIDNLHSMQLG 130

Query: 126 FIDVQMVLFKPQLNGLLNLVGLHYCTNLLEIPAYRVMEALQRCKISEKHVCVKWWKLGRW 185
           F DVQ+  F P+LN LLNLVGLHYC   L++ A +V+EAL+  +IS++ V V+WWK+GR 
Sbjct: 131 FKDVQLNFFNPKLNALLNLVGLHYCIKWLQVQAEKVLEALECSRISDRQVSVRWWKVGRR 190

Query: 186 FYGFRMRDEQHTRRVSLAELLTAEGEDVLGVLSRGPVHEVLRVQVSLLQLPFDTYF 242
           FYGFRMRDE H  RVSLA+L T  G++VLGVL RG +HEVL+VQ+S+       +F
Sbjct: 191 FYGFRMRDESHCCRVSLADLATERGDEVLGVLHRGAIHEVLQVQISVADCSCSPWF 246

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g04650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG08g04650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7T9_CUCSA2.2e-10180.60Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151470 PE=4 SV=1[more]
W9SER4_9ROSA2.2e-6955.10Uncharacterized protein OS=Morus notabilis GN=L484_008465 PE=4 SV=1[more]
A0A067KV42_JATCU1.2e-6756.89Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02020 PE=4 SV=1[more]
A0A067G666_CITSI2.1e-6757.02Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025624mg PE=4 SV=1[more]
D7T6I9_VITVI1.0e-6658.15Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0020g01850 PE=4 SV=... [more]
BLAST of Cp4.1LG08g04650 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15563.12.8e-3142.86 unknown protein[more]
BLAST of Cp4.1LG08g04650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076667|ref|XP_008438803.1|7.6e-10380.60PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo][more]
gi|449432801|ref|XP_004134187.1|3.2e-10180.60PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus][more]
gi|703132014|ref|XP_010105024.1|3.2e-6955.10hypothetical protein L484_008465 [Morus notabilis][more]
gi|802578190|ref|XP_012069403.1|1.8e-6756.89PREDICTED: uncharacterized protein LOC105631825 [Jatropha curcas][more]
gi|1009149863|ref|XP_015892706.1|1.8e-6754.24PREDICTED: uncharacterized protein LOC107426912 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0051744 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity
molecular_function GO:0033728 divinyl chlorophyllide a 8-vinyl-reductase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g04650.1Cp4.1LG08g04650.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 3..44
score: 5.
IPR001810F-box domainSMARTSM00256fbox_2coord: 6..46
score: 3.
IPR001810F-box domainPROFILEPS50181FBOXcoord: 1..46
score: 10
IPR001810F-box domainunknownSSF81383F-box domaincoord: 3..85
score: 2.88
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 4..83
score: 4.
NoneNo IPR availablePANTHERPTHR16008FAMILY NOT NAMEDcoord: 5..232
score: 8.0
NoneNo IPR availablePANTHERPTHR16008:SF5SUBFAMILY NOT NAMEDcoord: 5..232
score: 8.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g04650Cucsa.253560Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g04650CmaCh14G016430Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g04650CmaCh06G014670Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g04650CmoCh06G014670Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g04650CmoCh14G016860Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g04650Cla021705Watermelon (97103) v1cpewmB845
Cp4.1LG08g04650Csa3G151470Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g04650MELO3C006607Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g04650ClCG05G005800Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g04650CSPI03G13930Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g04650Lsi05G015030Bottle gourd (USVL1VR-Ls)cpelsiB718
Cp4.1LG08g04650MELO3C006607.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g04650CsaV3_3G014150Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g04650Bhi01G000677Wax gourdcpewgoB1110
Cp4.1LG08g04650CsGy3G014050Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g04650Carg20136Silver-seed gourdcarcpeB1165
Cp4.1LG08g04650Carg17368Silver-seed gourdcarcpeB0861
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g04650Cp4.1LG03g11270Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g04650Wax gourdcpewgoB1095
Cp4.1LG08g04650Wax gourdcpewgoB1096
Cp4.1LG08g04650Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g04650Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g04650Cucurbita pepo (Zucchini)cpecpeB343
Cp4.1LG08g04650Cucurbita maxima (Rimu)cmacpeB412
Cp4.1LG08g04650Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g04650Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g04650Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g04650Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g04650Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g04650Watermelon (97103) v1cpewmB853
Cp4.1LG08g04650Melon (DHL92) v3.5.1cpemeB793
Cp4.1LG08g04650Cucumber (Gy14) v2cgybcpeB885
Cp4.1LG08g04650Cucumber (Gy14) v2cgybcpeB894
Cp4.1LG08g04650Cucumber (Gy14) v2cgybcpeB989
Cp4.1LG08g04650Melon (DHL92) v3.6.1cpemedB933
Cp4.1LG08g04650Silver-seed gourdcarcpeB0109
Cp4.1LG08g04650Silver-seed gourdcarcpeB0456
Cp4.1LG08g04650Cucumber (Chinese Long) v3cpecucB1073
Cp4.1LG08g04650Cucumber (Chinese Long) v3cpecucB1081