Carg20136 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20136
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box-like domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_168 : 327352 .. 330078 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTACGTTCCACTATAAATATTTTCGCCATCGTCAAATTCTCCGTCCCCAGTTCTCGACTCCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTGAATCCATGGGTTTGCACCTTCTTCCCATTGATGCTGCCTTGAAGATTGCTTCTTCGCTTCAGGTTCCAATGGAGTTTTGTGTGATTCTGTTTCCTTTTTTTTTTCTTACTGTAATAATGTCTGTGGATTAATTTATCTATCTCTCTGGAATTTGGGGATGTGATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGTGCTATTTCCATTATCTTTATCTCTTCTTAATTTAGTAAATTGTTTCTCATATTGGATGGAAATTTGACTTGTTTAGTATATTTAGGTTTCTTGGAATCGATTGAGAGATTTGGAAGGTTCTTTTGTTATTTCCGCCTCTTAATTCAAGTGTAGCTAATGCGCCTTTGGAATTTCCCCTGCCCCTACCTGAAATGGTTTGATTATTTTGTGAAACGTACATTGGATATTTATCTAGAGTTGAACGTAAGTATCTGTTCTTCTAATTCATGAATGTTTAGGCCATATACAGACACTGTTCGATTGTAATGTATTTCCAATGAAAACTCGTAGGATATTAAATCTTAGCCTATTATTGTTTATGTTGATCCTTTGATGATCATTTCCATAATGGTGTTAAGGATCTTTGTTTTTGAAATCAATCCAGAGATTTGAAAGCTTGTTTTGTTCTTTCTTTGTCGCATTACAAATGTTGTTGAATTAGCTCCTTTGATGTTTCTCCTTCCCTATCTGAAATGATTGAACAGCTTAGGGAAACGTGTTAGGGATTTCAGGTTGATTTAGAACTTAAGTTCTGTTATTCTCATTCTTGAATTTAGTTGTTCTACGTGTTTTTTGATACCTTATTTGTTCTGTAGTTGAATGGGCCCTTTCGAATTTTCTCCATCCTTTCTGAAATGGTTGGTTTTCTTAGTGAAACATATATTGGATGTTTATCTTGAGTTGAACTATTGTTGGATATTTATCCGAGTCTTTGTTCTTATATACGTTATGAGATTTCTGTTCATTAACAAACAAATGAAACGTCTTCCAGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGTATGTCCTGCTGCTTTTGCCATTTTAGTTCAATCATTTGTAGGTTTAAATCACATTTTGGTCGTGAACTTTTATACTCATTCCATTTCGATCCCTTAAATCTTCAAATGTTCTATTTTTGTAACAACCCACCGCTAGCTGATATTGTCTTCTTTGGGTTTTCCCCTTCGAGCTTTCCCTCAAAGTTTTTAAAGTGAGATCCTACATCGGTTGGAGAGGGGAACGAAAGATTATTTATAAGGTTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAATCTTGAGGGAAAGCTCGAAAGAGAGCTCAAAAACGACAATATCGAGAGAGCTAAAAAACGACAATATCAACTAACAGTGGGTGTGGTCTGTTACAGTTTTAGGGATTTAAACCGAAGAGCTTAGCAGTTAGGAAGTTTTTGAGTGATAAACTAAAAAGAGGTAAAAATGAAATACTGTATTATAGGAGAATTAGGATTCCTGCTTCTTTTGTATATGATGCGTCTGAAATTGTTGAGTTGATATCCAACTTGTGGCAGGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGATCTCAGGAAAGCACATAAAAACACCCTTTGCATCTCCTAAGTAAGCATTCTGCAGCAATGATCTATGTGCTAATTAATAGTTGCTTCATATATTTCAAATAAATGCTTATAGATTTATGCCTGCAGATTCCCAAATGCTAAATACTTGTTGCCCATTCAGGTTTGATTTATAATTGGTATATTTTGTAAATTATTAGGAGCTTTTGGCTCCCCAGTATTGCGTTTCGGACAATCTTAATATCTTAGGTCACAGAGTACTAATAGTATAGTCCATAGCTACAACATTACTTTTCTATTTTGTTCGATTAAATCTTTAACATTCAAGTTTGTGCTATTTTATGTTCTATATTTTTAGAATGATCGAGTTCATGAATATGAATTTGTTATTTGAAAACTTTTTGTTTTCAAAATTTATGAACTAAATAATACAAATT

mRNA sequence

ACTACGTTCCACTATAAATATTTTCGCCATCGTCAAATTCTCCGTCCCCAGTTCTCGACTCCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTGAATCCATGGGTTTGCACCTTCTTCCCATTGATGCTGCCTTGAAGATTGCTTCTTCGCTTCAGGTTCCAATGGAGTTTTGTGTGATTCTGTTTCCTTTTTTTTTTCTTACTGTAATAATGTCTGTGGATTAATTTATCTATCTCTCTGGAATTTGGGGATGTGATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGATCTCAGGAAAGCACATAAAAACACCCTTTGCATCTCCTAAGTAAGCATTCTGCAGCAATGATCTATGTGCTAATTAATAGTTGCTTCATATATTTCAAATAAATGCTTATAGATTTATGCCTGCAGATTCCCAAATGCTAAATACTTGTTGCCCATTCAGGTTTGATTTATAATTGGTATATTTTGTAAATTATTAGGAGCTTTTGGCTCCCCAGTATTGCGTTTCGGACAATCTTAATATCTTAGGTCACAGAGTACTAATAGTATAGTCCATAGCTACAACATTACTTTTCTATTTTGTTCGATTAAATCTTTAACATTCAAGTTTGTGCTATTTTATGTTCTATATTTTTAGAATGATCGAGTTCATGAATATGAATTTGTTATTTGAAAACTTTTTGTTTTCAAAATTTATGAACTAAATAATACAAATT

Coding sequence (CDS)

ATGCGAATCGGTACGAAGGCATCGGACATTTGTTCTTTGGGCTGTTGCTCGCGATTTTGTAAGCAACTCTGCGATTCCGATTACCTGTGGGAATCTCTCACTCGAGAAAGATGGCCTTATATCAATGTTGCTTCGTCTACTGGTTCTTCTTCATCAACTCTCGCACAATCGCCTATCTCCATGGGATGGAAAAGCTTTTACATCCAGAGACATATCGAGATATCAAGACGAGCCCAAGCAGCGGTAAAGTTTATAGAACAATACTCTCCTTCTTCCCCAATTGAGGGTGGAGACTATCTCAGGACAATTGTAGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTCTTCAAACCTCACCTGAATGAGCTGCTGAACTTGGTTGGCTTACACTACTGTCAAAGTTGGCTTCAAGTTCCTGGGAATGAAATCATAGAAGCACTTGAAAGATGCAAGATCTCAGAGAGGCAAGTAAGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGCTTCCGTATGAGAGACGAGCAACAAACTCGTCGAGTCTCTCTAGCAGCACTCGTAGCAGAAGAAGGGGAAGACGTTCTCGAGGTGCTTAGCCGAGGCGCTGTTAACGAGGTGCTTCGAGTTCAGGTATCTGTAGGTGAGCCCTTTGCCAGTAACTGA

Protein sequence

MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN

Homology

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BLAST of Carg20136 vs. NCBI nr
Match: XP_022979916.1 (uncharacterized protein LOC111479465 isoform X2 [Cucurbita maxima] >XP_023526477.1 uncharacterized protein LOC111789966 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 226

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BLAST of Carg20136 vs. NCBI nr
Match: XP_022979915.1 (uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476.1 uncharacterized protein LOC111789966 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 450.3 bits (1157), Expect = 3.9e-123
Identity = 220/221 (99.55%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 239

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BLAST of Carg20136 vs. NCBI nr
Match: XP_022955428.1 (uncharacterized protein LOC111457456 isoform X2 [Cucurbita moschata])

HSP 1 Score: 449.9 bits (1156), Expect = 5.1e-123
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPIS 60
           MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPIS
Sbjct: 1   MRIGTKASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPIS 60

Query: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120
           MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL
Sbjct: 61  MGWKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVL 120

Query: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180
           FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD
Sbjct: 121 FKPHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRD 180

Query: 181 EQQTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           EQQTRRVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 181 EQQTRRVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 224

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BLAST of Carg20136 vs. NCBI nr
Match: XP_022955427.1 (uncharacterized protein LOC111457456 isoform X1 [Cucurbita moschata])

HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119
Identity = 216/221 (97.74%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           +ASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVAS   SSSSTLAQSPISMGWKS
Sbjct: 19  QASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASV--SSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL
Sbjct: 79  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLAAL+AEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN
Sbjct: 199 RVSLAALIAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 237

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BLAST of Carg20136 vs. NCBI nr
Match: XP_004134187.1 (PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus] >KGN57069.1 hypothetical protein Csa_3G151470 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 184/221 (83.26%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           + SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     GSSSSTLAQS ISMGWKS
Sbjct: 19  QVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN-----GSSSSTLAQSSISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLWDLKLSF+DAQMVLFKP L
Sbjct: 79  FYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 199 RVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 234

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BLAST of Carg20136 vs. TAIR10
Match: AT4G15563.1 (unknown protein)

HSP 1 Score: 121.7 bits (304), Expect = 5.8e-28
Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = 0


Query: 70  RHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNELL 129
           +H E++ RA   +K++ +   +  +E G YL  +  +  ++  F D ++  FKP+L+ LL
Sbjct: 2   QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61

Query: 130 NLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVSL 189
           NL+GL YC   L+    ++++ L +C ISE+ V VKW  LGRW  G RMRD+  +R+VSL
Sbjct: 62  NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121

Query: 190 AALVAEEGEDVLEVLSRGAVNEVLRVQVS 219
             +V  + E VL VL RG V+EVLRV +S
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCIS 150

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BLAST of Carg20136 vs. TrEMBL
Match: tr|A0A1S3AXY1|A0A1S3AXY1_CUCME (uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 6.6e-103
Identity = 184/221 (83.26%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           + S+ICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     GSSSSTLAQSPISMGWKS
Sbjct: 19  QVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYIN-----GSSSSTLAQSPISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEI  RAQAAVKF+EQ SPS+PIEGGDYLRTI GLWDLKLSF+DAQMVLFKP L
Sbjct: 79  FYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYC+ WLQVP N+I+EAL+RCKI+ER + VKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 199 RVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 234

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BLAST of Carg20136 vs. TrEMBL
Match: tr|A0A0A0L7T9|A0A0A0L7T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 6.6e-103
Identity = 184/221 (83.26%), Postives = 200/221 (90.50%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKS 65
           + SDICSLGCCSRFC+QLCDSDYLWESL RERWPYIN     GSSSSTLAQS ISMGWKS
Sbjct: 19  QVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYIN-----GSSSSTLAQSSISMGWKS 78

Query: 66  FYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHL 125
           FYIQRHIEIS RAQAAVKF+EQ SPS+PIEGGDYLRTI GLWDLKLSF+DAQMVLFKP L
Sbjct: 79  FYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLSFVDAQMVLFKPQL 138

Query: 126 NELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTR 185
           NELLNLVGLHYC+ WLQ+P N+I+EAL+RCKI+ER + VKWWKLGRWFYGFRMRDEQQTR
Sbjct: 139 NELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTR 198

Query: 186 RVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
           RVSLA L+ EEGEDVL VLSRGAV+EVLRVQVSVG+ FA +
Sbjct: 199 RVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGH 234

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BLAST of Carg20136 vs. TrEMBL
Match: tr|W9SER4|W9SER4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008465 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 8.2e-61
Identity = 118/224 (52.68%), Postives = 156/224 (69.64%), Query Frame = 0


Query: 6   KASDICSLGCCSRFCKQLCDSDYLWESLTRERWPY---INVASSTGSSSSTLAQSPISMG 65
           + SD+C+LG CSRF ++LC SD LWESL +ERWP+   +    S+ SSSS   + P+  G
Sbjct: 24  QVSDLCALGSCSRFWRELCKSDCLWESLAKERWPFQALLEENPSSSSSSSIATEIPLFQG 83

Query: 66  WKSFYIQRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFK 125
           W+ FYI+RH E++ R   AV F+EQ S    +E GDYL+ I  L  +KL F D +M+LF 
Sbjct: 84  WRDFYIERHNEMASRVMEAVGFVEQSSRCESLEVGDYLKAIEVLDAMKLGFKDVEMLLFN 143

Query: 126 PHLNELLNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQ 185
           P LN L NLVG+ YC SWL VP   +++AL+  KIS+RQV ++WWKLGRWFYGFRMRDE 
Sbjct: 144 PKLNSLPNLVGVQYCISWLGVPAEYVLQALQYRKISDRQVCIRWWKLGRWFYGFRMRDES 203

Query: 186 QTRRVSLAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFASN 227
            +  VSLA L   + E+VL VL RGAV+EVLRVQ+S  +P +++
Sbjct: 204 HSHCVSLADLATAKAEEVLGVLYRGAVHEVLRVQISTADPSSAS 247

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BLAST of Carg20136 vs. TrEMBL
Match: tr|A0A067KV42|A0A067KV42_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02020 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 113/217 (52.07%), Postives = 149/217 (68.66%), Query Frame = 0


Query: 9   DICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKSFYI 68
           D+C+LGCCSRF  +LC SD LWE LT+ERWP ++  S     S      P+  GW+  YI
Sbjct: 29  DVCALGCCSRFWSELCRSDCLWEFLTKERWPSVSFISDFSPCS-----VPVIKGWREIYI 88

Query: 69  QRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNEL 128
           + H E++ +A   ++F+E  S S  +E GDY + I  LW ++L+F D QM LFKP+LN L
Sbjct: 89  KMHREMAGKATTVIEFVEHRSLSQSLEIGDYNKAIQDLWLMRLAFKDIQMFLFKPNLNVL 148

Query: 129 LNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVS 188
           LNLVGLHYC   L++P   +++AL  CKISER+V V WWKLGRWFYGFRMRDE  +R+VS
Sbjct: 149 LNLVGLHYCIFCLKLPARNVMDALLSCKISEREVCVNWWKLGRWFYGFRMRDESHSRKVS 208

Query: 189 LAALVAEEGEDVLEVLSRGAVNEVLRVQVSVGEPFAS 226
           L  L  ++GEDVL VL RGA++EVLRV++ +     S
Sbjct: 209 LTDLTTDKGEDVLGVLQRGAIHEVLRVEIFISNATTS 240

[Close]

BLAST of Carg20136 vs. TrEMBL
Match: tr|B9RT00|B9RT00_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0679740 PE=4 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.4e-59
Identity = 108/211 (51.18%), Postives = 153/211 (72.51%), Query Frame = 0


Query: 9   DICSLGCCSRFCKQLCDSDYLWESLTRERWPYINVASSTGSSSSTLAQSPISMGWKSFYI 68
           D+C+LG CSR  ++LC SD LWESLT++RWP +++     SSSST    P+  GW+  Y+
Sbjct: 29  DVCALGSCSRLWRELCRSDCLWESLTKQRWPSVSLPFLCNSSSST--TDPLVKGWREIYV 88

Query: 69  QRHIEISRRAQAAVKFIEQYSPSSPIEGGDYLRTIVGLWDLKLSFIDAQMVLFKPHLNEL 128
           + H E++ +A A V+F+E  SP   +E G+Y + +  L+ ++L+F D QM LFKP LN L
Sbjct: 89  RLHEEMAGKATALVEFVEHSSPYDSLEVGEYYKALQDLYSMQLAFTDVQMFLFKPRLNVL 148

Query: 129 LNLVGLHYCQSWLQVPGNEIIEALERCKISERQVSVKWWKLGRWFYGFRMRDEQQTRRVS 188
           LNLVGLHYC   L+VP   +++AL  CK+SERQV VKWWK+GRWF+GF M +E  +R VS
Sbjct: 149 LNLVGLHYCIFGLKVPAEHVMDALLSCKVSERQVCVKWWKIGRWFFGFHMTEEPHSRTVS 208

Query: 189 LAALVAEEGEDVLEVLSRGAVNEVLRVQVSV 220
           LA L  E+GE++L+VL RGA++EVLR+++S+
Sbjct: 209 LADLTTEKGEEILKVLHRGAIHEVLRIEISI 237

The following BLAST results are available for this feature:

BLAST of Carg20136 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979916.1	1.3e-126	100.00	uncharacterized protein LOC111479465 isoform X2 [Cucurbita maxima] >XP_023526477...	[more]
XP_022979915.1	3.9e-123	99.55	uncharacterized protein LOC111479465 isoform X1 [Cucurbita maxima] >XP_023526476...	[more]
XP_022955428.1	5.1e-123	98.23	uncharacterized protein LOC111457456 isoform X2 [Cucurbita moschata]	[more]
XP_022955427.1	1.5e-119	97.74	uncharacterized protein LOC111457456 isoform X1 [Cucurbita moschata]	[more]
XP_004134187.1	1.0e-102	83.26	PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus] >KGN57069.1 hy...	[more]

BLAST of Carg20136 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G15563.1	5.8e-28	40.94	unknown protein	[more]

BLAST of Carg20136 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg20136 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AXY1\|A0A1S3AXY1_CUCME	6.6e-103	83.26	uncharacterized protein LOC103483796 OS=Cucumis melo OX=3656 GN=LOC103483796 PE=...	[more]
tr\|A0A0A0L7T9\|A0A0A0L7T9_CUCSA	6.6e-103	83.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G151470 PE=4 SV=1	[more]
tr\|W9SER4\|W9SER4_9ROSA	8.2e-61	52.68	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008465 PE=4 SV=1	[more]
tr\|A0A067KV42\|A0A067KV42_JATCU	1.5e-59	52.07	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_02020 PE=4 SV=1	[more]
tr\|B9RT00\|B9RT00_RICCO	3.4e-59	51.18	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0679740 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20136-RA	Carg20136-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16008	FAMILY NOT NAMED	coord: 7..219
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 7..72

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20136	Cla021705	Watermelon (97103) v1	carwmB0834
Carg20136	Csa3G151470	Cucumber (Chinese Long) v2	carcuB0854
Carg20136	MELO3C006607	Melon (DHL92) v3.5.1	carmeB0828
Carg20136	ClCG05G005800	Watermelon (Charleston Gray)	carwcgB0807
Carg20136	CSPI03G13930	Wild cucumber (PI 183967)	carcpiB0874
Carg20136	Cucsa.253560	Cucumber (Gy14) v1	carcgyB0960
Carg20136	CmaCh06G014670	Cucurbita maxima (Rimu)	carcmaB1155
Carg20136	CmoCh14G016860	Cucurbita moschata (Rifu)	carcmoB1123
Carg20136	CmoCh06G014670	Cucurbita moschata (Rifu)	carcmoB1125
Carg20136	Lsi05G015030	Bottle gourd (USVL1VR-Ls)	carlsiB761
Carg20136	Cp4.1LG08g04650	Cucurbita pepo (Zucchini)	carcpeB1165
Carg20136	Cp4.1LG03g11270	Cucurbita pepo (Zucchini)	carcpeB1164
Carg20136	CsGy3G014050	Cucumber (Gy14) v2	carcgybB0828
Carg20136	MELO3C006607.2	Melon (DHL92) v3.6.1	carmedB0840
Carg20136	CsaV3_3G014150	Cucumber (Chinese Long) v3	carcucB0878
Carg20136	Cla97C05G087240	Watermelon (97103) v2	carwmbB0867
Carg20136	Bhi01G000677	Wax gourd	carwgoB0972

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20136	Carg17368	Silver-seed gourd	carcarB544

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20136	Watermelon (97103) v2	carwmbB0868
Carg20136	Silver-seed gourd	carcarB087
Carg20136	Cucurbita maxima (Rimu)	carcmaB1153
Carg20136	Cucurbita maxima (Rimu)	carcmaB1154
Carg20136	Cucurbita maxima (Rimu)	carcmaB1156
Carg20136	Cucurbita moschata (Rifu)	carcmoB1124
Carg20136	Cucurbita moschata (Rifu)	carcmoB1126
Carg20136	Cucurbita pepo (Zucchini)	carcpeB1163
Carg20136	Bottle gourd (USVL1VR-Ls)	carlsiB760
Carg20136	Melon (DHL92) v3.5.1	carmeB0827
Carg20136	Melon (DHL92) v3.6.1	carmedB0839
Carg20136	Watermelon (Charleston Gray)	carwcgB0808
Carg20136	Watermelon (97103) v1	carwmB0835