ClCG05G005800 (gene) Watermelon (Charleston Gray)

Overview
NameClCG05G005800
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionF-box domain containing protein
LocationCG_Chr05 : 5701113 .. 5703887 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCCATCGTCAAAGGCTTCGCCTCCAGTTCTCAACTTCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTCAATCCAATCGGTGGTTTTCCTTGTTAGATTTTCTTCTTCCTATGAAATTCATCATTCCAGGGCCTCGCCTGTTTCAATCTCTATTAACAATTTTCCCGTAGAAAGAAGAGAATTGAGAGCAATCGAAAATGGGTTTGGATCATCTTCCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGTTTCACGAAGTTTTCTGTTATTCTGATCATTTTTTCATTTTACTGGATATTTTTTGTGGATTAATTGATCTGTCTCTGTGTAATTTGGGGTTGTGATTCGAAACGAAGGCATCGGAAATTTGTTCTTTGGGCTGTTGCTCGCGGTTTTGCAGGCAACTCTGCGACTCCGATTACCTATGGGAATCTTTCGCAAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCCCCATCTCTATGGTGCTCTTTCCATTATCTTTATCTCCTTTTCCTTTTTTCTCTACTCAATTTATGAAATTGTTCCCATATTGGATGATTATTTTACTTGTTTTGTATATTTAGGTTTCTCGAAATCAATTGAGAGATTTGAAAGGTTCTTTTGTTCTTTCTGCCTCTTAATTCAAGTGTAGCTGAATGAGCCATTTCGGATTTTTCACTGTCCCTATCTGTAATGGTTGGACTATTTACTGAAACACACATTGGATATTTTTCACTGTCCCTTTAAATTTTGTCCATCCCTATCTGAAATGTTTGAACCTTTTTAGGCAAACGTGCACCGATTTTTATCTTGAGTTTGAACTTAAGTTTTGTCTGTCTCATTCGTGAATTTTCTTATACTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTTATAGCAATTAAGGGATCTGAAAGCTTGTTTTGTTCTGTAGTTGAATGAGATCTTTTGAATTTTCCCCATCTGAAACATACATCGGATGTTTACCTTGAGTTTGAACTTACGTTTTGTCTGTCTCATTCGTGAATTTTCTTATACTTTGAGTTTTTTTTTTTTTTTTTTTTTTTTATAGCAATTAAGGGATTTGAAAGCTTGTTTTGTTCTGTAGTTGAATGAGATCTTTTGAATTTTCCCCATCTGAAACATACATTGGATGTTTACCTTGAGTTTGAACTTATGTTGGATTTTTATCCAAGTCTTAACAAACAAAATGAAATATCTTTCAGGGATGGAAAAGCTTTTACATCCAGAGACATATTGAGATATTGGGAAGAGCCCAAGCCGCGGTAAAGTTTATAGAACAATGCTCTCCTTCTACTCCGATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAGACCCCAACTTAGTGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAACTTGGCTTCAAGTCCCTGTATGTCCTGCTGCTTTTGTCCTTTAACTTTCTAATTTTTTGTTATAGTCTCTTAAATATGCAGAAGTTTCAGTTTTAGTCTTTGCCATTAATTTTCTGTAGCCATTTATCAAGAAATCCAGGTCTTTTTGAAATTTGATACTTCTCTATCAGAGACACACAATTTCGAATAATTGTTTACGCGGTCATTTGCTTGTCAGATAAATAAACTAAGAACATATCTATGTCAATTTTTTTTGTTAAACAATTTGTAAAACAAATTCAATGGCAAGGACTTGACTGATTCTTTATGCAAAGATCAGGGACTAAAGCAAAATTTTTAAACTTTAAGGATCAAAGTAAAAGTTCAGAGTCCAAAATAGAACTTATGCCAATGGTTTATTTCATGTGTGTTTTGATAAAACATTCATAAATAATCCCTACGATAGGGACTATTTATGAGAATTTTAACAATTGGAGGGACTATTTATGAGGTCTTATCAAACCGTAGGGACCAAATTCTAACTTTTAAAACCATATGGACTAAATTCTAACTTTTTCCAAACTATAAAGACAACTTATAATTTAACCTCTTATTTACTATCAAATACGGAAGCTAATATTTTAGCTTTCAATGTTGAAGCTGAAGAACTTAGTGGTTAGCAATTTTTTGAGTGATAAAACTAAAACAGGTAGAAAAGAAAAGACTTAAATTGTTGAGTTGAATTTCAACTTCTGGCAGGCCAATCAAGTCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGCGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTCTGGCAGAACTCTTAATGGAAGAAGGGGAAGATGTTCTTGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTGCTTCGAGTTCAGGTTTCTGTAGGCGATCCCTTTGGCAGTCACTGGTCTCAGCAAAGCACATAAAATAAAAACCCTTGGCATCTCCCACGTAAGCATTCTGCAACTGCTATGATCTATATGCAAATAGTTGTTTCATTATGTATTTCAAATAATTGCTTGTAGATTATTCATGCAGATATCTAAATGTAAATATTTGTTGCCCATTCAGATTTGATTTATAAGCTGTATTTCACCAACTTATGCACATCAATAATTGGTGTGTTTTGTAAATTATTAAGAGCTTATGGCTCAAAGTACTGGGATTCTGACAATCTTATTCTTTAGCACTACTATTTCTGGG

mRNA sequence

CGCCATCGTCAAAGGCTTCGCCTCCAGTTCTCAACTTCAGCATACTCCGTTCGGAAGCAAGCTCGGTTAGGGATTCAATCCAATCGGTGGTTTTCCTTGTTAGATTTTCTTCTTCCTATGAAATTCATCATTCCAGGGCCTCGCCTGTTTCAATCTCTATTAACAATTTTCCCGTAGAAAGAAGAGAATTGAGAGCAATCGAAAATGGGTTTGGATCATCTTCCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGCATCGGAAATTTGTTCTTTGGGCTGTTGCTCGCGGTTTTGCAGGCAACTCTGCGACTCCGATTACCTATGGGAATCTTTCGCAAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCCCCATCTCTATGGGATGGAAAAGCTTTTACATCCAGAGACATATTGAGATATTGGGAAGAGCCCAAGCCGCGGTAAAGTTTATAGAACAATGCTCTCCTTCTACTCCGATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAGACCCCAACTTAGTGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAACTTGGCTTCAAGTCCCTGCCAATCAAGTCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGCGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTCTGGCAGAACTCTTAATGGAAGAAGGGGAAGATGTTCTTGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTGCTTCGAGTTCAGGTTTCTGTAGGCGATCCCTTTGGCAGTCACTGGTCTCAGCAAAGCACATAAAATAAAAACCCTTGGCATCTCCCACGTAAGCATTCTGCAACTGCTATGATCTATATGCAAATAGTTGTTTCATTATGTATTTCAAATAATTGCTTGTAGATTATTCATGCAGATATCTAAATGTAAATATTTGTTGCCCATTCAGATTTGATTTATAAGCTGTATTTCACCAACTTATGCACATCAATAATTGGTGTGTTTTGTAAATTATTAAGAGCTTATGGCTCAAAGTACTGGGATTCTGACAATCTTATTCTTTAGCACTACTATTTCTGGG

Coding sequence (CDS)

ATGGGTTTGGATCATCTTCCCATTGACACTGCACTGAAAATTGCTTCTTCCCTTCAGGCATCGGAAATTTGTTCTTTGGGCTGTTGCTCGCGGTTTTGCAGGCAACTCTGCGACTCCGATTACCTATGGGAATCTTTCGCAAGGGAAAGATGGCCTTATATCAATGGTTCTTCTTCGTCAACTCTCGCACAATCCCCCATCTCTATGGGATGGAAAAGCTTTTACATCCAGAGACATATTGAGATATTGGGAAGAGCCCAAGCCGCGGTAAAGTTTATAGAACAATGCTCTCCTTCTACTCCGATCGAGGGTGGAGACTATCTCAGGACAATTGGTGGCTTGTGGGATTTGAAGCTTAGTTTTATAGATGCTCAAATGGTGCTTTTCAGACCCCAACTTAGTGAGCTGCTGAACTTGGTTGGCTTACACTACTGTAGAACTTGGCTTCAAGTCCCTGCCAATCAAGTCATGGAAGCACTTCAAAGATGCAAGATAGCAGAGCGGCATATATGTGTGAAATGGTGGAAGCTGGGAAGATGGTTTTATGGATTCCGTATGAGAGACGAACAACAAACTCGTCGAGTCTCTCTGGCAGAACTCTTAATGGAAGAAGGGGAAGATGTTCTTGGGGTGCTTAGCCGAGGTGCTGTTCACGAGGTGCTTCGAGTTCAGGTTTCTGTAGGCGATCCCTTTGGCAGTCACTGGTCTCAGCAAAGCACATAA

Protein sequence

MGLDHLPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST
Homology
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BLAST of ClCG05G005800 vs. TrEMBL
Match: A0A0A0L7T9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151470 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 1.0e-127
Identity = 220/240 (91.67%), Postives = 230/240 (95.83%), Query Frame = 1 

Query: 1   MGLDHLPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSS 60
           MGLD+L IDTALKIASSLQ S+ICSLGCCSRFCRQLCDSDYLWES ARERWPYINGSSSS
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKSFYIQRHIEI GRAQAAVKF+EQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRW 180
           F+DAQMVLF+PQL+ELLNLVGLHYCR WLQ+PANQ+MEALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 240
           FYGFRMRDEQQTRRVSLAEL+ EEGEDVLGVLSRGAVHEVLRVQVSVGD F  HWS+QST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]
BLAST of ClCG05G005800 vs. TrEMBL
Match: W9SER4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008465 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.5e-70
Identity = 134/243 (55.14%), Postives = 170/243 (69.96%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPY--------INGS 65
           LP D A+KIASSLQ S++C+LG CSRF R+LC SD LWES A+ERWP+         + S
Sbjct: 11  LPDDIAVKIASSLQVSDLCALGSCSRFWRELCKSDCLWESLAKERWPFQALLEENPSSSS 70

Query: 66  SSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDL 125
           SSS   + P+  GW+ FYI+RH E+  R   AV F+EQ S    +E GDYL+ I  L  +
Sbjct: 71  SSSIATEIPLFQGWRDFYIERHNEMASRVMEAVGFVEQSSRCESLEVGDYLKAIEVLDAM 130

Query: 126 KLSFIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKL 185
           KL F D +M+LF P+L+ L NLVG+ YC +WL VPA  V++ALQ  KI++R +C++WWKL
Sbjct: 131 KLGFKDVEMLLFNPKLNSLPNLVGVQYCISWLGVPAEYVLQALQYRKISDRQVCIRWWKL 190

Query: 186 GRWFYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQ 241
           GRWFYGFRMRDE  +  VSLA+L   + E+VLGVL RGAVHEVLRVQ+S  DP  + W  
Sbjct: 191 GRWFYGFRMRDESHSHCVSLADLATAKAEEVLGVLYRGAVHEVLRVQISTADPSSASWYN 250

[Close]
BLAST of ClCG05G005800 vs. TrEMBL
Match: A0A067KV42_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02020 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 7.3e-70
Identity = 126/235 (53.62%), Postives = 166/235 (70.64%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQS 65
           LP D ALKIAS L+  ++C+LGCCSRF  +LC SD LWE   +ERWP ++  S  +    
Sbjct: 13  LPFDIALKIASHLEVLDVCALGCCSRFWSELCRSDCLWEFLTKERWPSVSFISDFSPCSV 72

Query: 66  PISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQ 125
           P+  GW+  YI+ H E+ G+A   ++F+E  S S  +E GDY + I  LW ++L+F D Q
Sbjct: 73  PVIKGWREIYIKMHREMAGKATTVIEFVEHRSLSQSLEIGDYNKAIQDLWLMRLAFKDIQ 132

Query: 126 MVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFR 185
           M LF+P L+ LLNLVGLHYC   L++PA  VM+AL  CKI+ER +CV WWKLGRWFYGFR
Sbjct: 133 MFLFKPNLNVLLNLVGLHYCIFCLKLPARNVMDALLSCKISEREVCVNWWKLGRWFYGFR 192

Query: 186 MRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 241
           MRDE  +R+VSL +L  ++GEDVLGVL RGA+HEVLRV++ + +   S WS QS+
Sbjct: 193 MRDESHSRKVSLTDLTTDKGEDVLGVLQRGAIHEVLRVEIFISNATTSPWSSQSS 247

[Close]
BLAST of ClCG05G005800 vs. TrEMBL
Match: A0A067G666_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025624mg PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 8.0e-69
Identity = 129/235 (54.89%), Postives = 164/235 (69.79%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQS 65
           LP D A KI S L+ SE+C+LGCCSRF R LC SD +WES +++RWP +N  SSS     
Sbjct: 12  LPEDIAFKIISFLEESEVCALGCCSRFWRNLCGSDCIWESLSKQRWPLLNNESSSVQNSD 71

Query: 66  PISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQ 125
           P S GW+ FY+ RHIEI+  A   VK +EQC+ S  +E GDYL+ I  L  + L F D Q
Sbjct: 72  PTSEGWRGFYMNRHIEIVNGATDVVKHVEQCTRSESLEVGDYLQAIEDLSTMHLGFKDVQ 131

Query: 126 MVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFR 185
           M LF+P+L+ LL+LVGLHYC   L VP   V EAL+  KI++R +C+KWWKLGRWFYGFR
Sbjct: 132 MFLFKPKLNVLLSLVGLHYCIFRLNVPPEYVAEALKSRKISDREVCIKWWKLGRWFYGFR 191

Query: 186 MRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 241
           MRDE  +R VSLA+L+ ++ E+VLGVL RGA+HEVLRVQ+S      + W  + T
Sbjct: 192 MRDEYHSRWVSLADLVTKKEEEVLGVLHRGAIHEVLRVQISFVISLDTPWFSRGT 246

[Close]
BLAST of ClCG05G005800 vs. TrEMBL
Match: V4S2E6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006777mg PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 4.0e-68
Identity = 128/235 (54.47%), Postives = 163/235 (69.36%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQS 65
           LP D A KI S L+ SE+C+LGCCSRF R LC SD +WES +++RWP +N  SSS     
Sbjct: 635 LPEDIAFKIISFLEESEVCALGCCSRFWRNLCGSDCIWESLSKQRWPLLNNESSSVQNSG 694

Query: 66  PISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQ 125
           P S GW+ FY+ RHIEI+  A   VK +E+C+ S  +E GDYL+ I  L  + L F D Q
Sbjct: 695 PTSEGWRGFYMNRHIEIVNGATDVVKHVERCTRSESLEVGDYLQAIEDLSTMHLGFKDVQ 754

Query: 126 MVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFR 185
           M LF+P+L+ LL+LVGLHYC   L VP   V EAL   KI++R +C+KWWKLGRWFYGFR
Sbjct: 755 MFLFKPKLNVLLSLVGLHYCIFRLNVPPEYVAEALTSRKISDREVCIKWWKLGRWFYGFR 814

Query: 186 MRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 241
           MRDE  +R VSLA+L+ ++ E+VLGVL RGA+HEVLRVQ+S      + W  + T
Sbjct: 815 MRDEYHSRWVSLADLVTKKEEEVLGVLHRGAIHEVLRVQISFVISLDTPWFSRGT 869

[Close]
BLAST of ClCG05G005800 vs. TAIR10
Match: AT4G15563.1 (AT4G15563.1 unknown protein)

HSP 1 Score: 122.5 bits (306), Expect = 3.6e-28
Identity = 62/152 (40.79%), Postives = 93/152 (61.18%), Query Frame = 1 

Query: 78  RHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQMVLFRPQLSELL 137
           +H E+  RA   +K++ +   +  +E G YL  +  +  ++  F D ++  F+P LS LL
Sbjct: 2   QHKEMASRASEVIKYVTKSPATLSLEAGIYLHAVETMSSMRFGFQDVELFFFKPNLSVLL 61

Query: 138 NLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFRMRDEQQTRRVSL 197
           NL+GL YC   L+    QV++ L++C I+E+ + VKW  LGRW  G RMRD+  +R+VSL
Sbjct: 62  NLIGLIYCIQHLKPRREQVVDVLRQCGISEQLVWVKWLTLGRWSGGSRMRDDIVSRQVSL 121

Query: 198 AELLMEEGEDVLGVLSRGAVHEVLRVQVSVGD 230
            +++  + E VL VL RG VHEVLRV +S  D
Sbjct: 122 VDVVTGKEETVLRVLQRGVVHEVLRVCISTVD 153

[Close]
BLAST of ClCG05G005800 vs. NCBI nr
Match: gi|659076667|ref|XP_008438803.1| (PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo])

HSP 1 Score: 472.2 bits (1214), Expect = 5.2e-130
Identity = 223/240 (92.92%), Postives = 231/240 (96.25%), Query Frame = 1 

Query: 1   MGLDHLPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSS 60
           MG DHLP DTALKIASSLQ SEICSLGCCSRFCRQLCDSDYLWES ARERWPYINGSSSS
Sbjct: 1   MGFDHLPTDTALKIASSLQVSEICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQSPISMGWKSFYIQRHIEILGRAQAAVKF+EQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRW 180
           F+DAQMVLF+PQL+ELLNLVGLHYCR WLQVPANQ++EALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQVPANQILEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 240
           FYGFRMRDEQQTRRVSLAEL+ EEGEDVLGVLSRGAVHEVLRVQVSVGD F  HWS+QST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]
BLAST of ClCG05G005800 vs. NCBI nr
Match: gi|449432801|ref|XP_004134187.1| (PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 1.4e-127
Identity = 220/240 (91.67%), Postives = 230/240 (95.83%), Query Frame = 1 

Query: 1   MGLDHLPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSS 60
           MGLD+L IDTALKIASSLQ S+ICSLGCCSRFCRQLCDSDYLWES ARERWPYINGSSSS
Sbjct: 1   MGLDNLSIDTALKIASSLQVSDICSLGCCSRFCRQLCDSDYLWESLARERWPYINGSSSS 60

Query: 61  TLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLS 120
           TLAQS ISMGWKSFYIQRHIEI GRAQAAVKF+EQCSPSTPIEGGDYLRTIGGLWDLKLS
Sbjct: 61  TLAQSSISMGWKSFYIQRHIEISGRAQAAVKFVEQCSPSTPIEGGDYLRTIGGLWDLKLS 120

Query: 121 FIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRW 180
           F+DAQMVLF+PQL+ELLNLVGLHYCR WLQ+PANQ+MEALQRCKIAERHICVKWWKLGRW
Sbjct: 121 FVDAQMVLFKPQLNELLNLVGLHYCRIWLQIPANQIMEALQRCKIAERHICVKWWKLGRW 180

Query: 181 FYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 240
           FYGFRMRDEQQTRRVSLAEL+ EEGEDVLGVLSRGAVHEVLRVQVSVGD F  HWS+QST
Sbjct: 181 FYGFRMRDEQQTRRVSLAELMTEEGEDVLGVLSRGAVHEVLRVQVSVGDSFAGHWSRQST 240

[Close]
BLAST of ClCG05G005800 vs. NCBI nr
Match: gi|703132014|ref|XP_010105024.1| (hypothetical protein L484_008465 [Morus notabilis])

HSP 1 Score: 274.2 bits (700), Expect = 2.1e-70
Identity = 134/243 (55.14%), Postives = 170/243 (69.96%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPY--------INGS 65
           LP D A+KIASSLQ S++C+LG CSRF R+LC SD LWES A+ERWP+         + S
Sbjct: 11  LPDDIAVKIASSLQVSDLCALGSCSRFWRELCKSDCLWESLAKERWPFQALLEENPSSSS 70

Query: 66  SSSTLAQSPISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDL 125
           SSS   + P+  GW+ FYI+RH E+  R   AV F+EQ S    +E GDYL+ I  L  +
Sbjct: 71  SSSIATEIPLFQGWRDFYIERHNEMASRVMEAVGFVEQSSRCESLEVGDYLKAIEVLDAM 130

Query: 126 KLSFIDAQMVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKL 185
           KL F D +M+LF P+L+ L NLVG+ YC +WL VPA  V++ALQ  KI++R +C++WWKL
Sbjct: 131 KLGFKDVEMLLFNPKLNSLPNLVGVQYCISWLGVPAEYVLQALQYRKISDRQVCIRWWKL 190

Query: 186 GRWFYGFRMRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQ 241
           GRWFYGFRMRDE  +  VSLA+L   + E+VLGVL RGAVHEVLRVQ+S  DP  + W  
Sbjct: 191 GRWFYGFRMRDESHSHCVSLADLATAKAEEVLGVLYRGAVHEVLRVQISTADPSSASWYN 250

[Close]
BLAST of ClCG05G005800 vs. NCBI nr
Match: gi|802578190|ref|XP_012069403.1| (PREDICTED: uncharacterized protein LOC105631825 [Jatropha curcas])

HSP 1 Score: 271.9 bits (694), Expect = 1.0e-69
Identity = 126/235 (53.62%), Postives = 166/235 (70.64%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQS 65
           LP D ALKIAS L+  ++C+LGCCSRF  +LC SD LWE   +ERWP ++  S  +    
Sbjct: 13  LPFDIALKIASHLEVLDVCALGCCSRFWSELCRSDCLWEFLTKERWPSVSFISDFSPCSV 72

Query: 66  PISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQ 125
           P+  GW+  YI+ H E+ G+A   ++F+E  S S  +E GDY + I  LW ++L+F D Q
Sbjct: 73  PVIKGWREIYIKMHREMAGKATTVIEFVEHRSLSQSLEIGDYNKAIQDLWLMRLAFKDIQ 132

Query: 126 MVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFR 185
           M LF+P L+ LLNLVGLHYC   L++PA  VM+AL  CKI+ER +CV WWKLGRWFYGFR
Sbjct: 133 MFLFKPNLNVLLNLVGLHYCIFCLKLPARNVMDALLSCKISEREVCVNWWKLGRWFYGFR 192

Query: 186 MRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 241
           MRDE  +R+VSL +L  ++GEDVLGVL RGA+HEVLRV++ + +   S WS QS+
Sbjct: 193 MRDESHSRKVSLTDLTTDKGEDVLGVLQRGAIHEVLRVEIFISNATTSPWSSQSS 247

[Close]
BLAST of ClCG05G005800 vs. NCBI nr
Match: gi|641856294|gb|KDO75074.1| (hypothetical protein CISIN_1g025624mg [Citrus sinensis])

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-68
Identity = 129/235 (54.89%), Postives = 164/235 (69.79%), Query Frame = 1 

Query: 6   LPIDTALKIASSLQASEICSLGCCSRFCRQLCDSDYLWESFARERWPYINGSSSSTLAQS 65
           LP D A KI S L+ SE+C+LGCCSRF R LC SD +WES +++RWP +N  SSS     
Sbjct: 12  LPEDIAFKIISFLEESEVCALGCCSRFWRNLCGSDCIWESLSKQRWPLLNNESSSVQNSD 71

Query: 66  PISMGWKSFYIQRHIEILGRAQAAVKFIEQCSPSTPIEGGDYLRTIGGLWDLKLSFIDAQ 125
           P S GW+ FY+ RHIEI+  A   VK +EQC+ S  +E GDYL+ I  L  + L F D Q
Sbjct: 72  PTSEGWRGFYMNRHIEIVNGATDVVKHVEQCTRSESLEVGDYLQAIEDLSTMHLGFKDVQ 131

Query: 126 MVLFRPQLSELLNLVGLHYCRTWLQVPANQVMEALQRCKIAERHICVKWWKLGRWFYGFR 185
           M LF+P+L+ LL+LVGLHYC   L VP   V EAL+  KI++R +C+KWWKLGRWFYGFR
Sbjct: 132 MFLFKPKLNVLLSLVGLHYCIFRLNVPPEYVAEALKSRKISDREVCIKWWKLGRWFYGFR 191

Query: 186 MRDEQQTRRVSLAELLMEEGEDVLGVLSRGAVHEVLRVQVSVGDPFGSHWSQQST 241
           MRDE  +R VSLA+L+ ++ E+VLGVL RGA+HEVLRVQ+S      + W  + T
Sbjct: 192 MRDEYHSRWVSLADLVTKKEEEVLGVLHRGAIHEVLRVQISFVISLDTPWFSRGT 246

The following BLAST results are available for this feature:
BLAST of ClCG05G005800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7T9_CUCSA1.0e-12791.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G151470 PE=4 SV=1[more]
W9SER4_9ROSA1.5e-7055.14Uncharacterized protein OS=Morus notabilis GN=L484_008465 PE=4 SV=1[more]
A0A067KV42_JATCU7.3e-7053.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02020 PE=4 SV=1[more]
A0A067G666_CITSI8.0e-6954.89Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025624mg PE=4 SV=1[more]
V4S2E6_9ROSI4.0e-6854.47Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006777mg PE=4 SV=1[more]
BLAST of ClCG05G005800 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15563.13.6e-2840.79 unknown protein[more]
BLAST of ClCG05G005800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076667|ref|XP_008438803.1|5.2e-13092.92PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo][more]
gi|449432801|ref|XP_004134187.1|1.4e-12791.67PREDICTED: uncharacterized protein LOC101218430 [Cucumis sativus][more]
gi|703132014|ref|XP_010105024.1|2.1e-7055.14hypothetical protein L484_008465 [Morus notabilis][more]
gi|802578190|ref|XP_012069403.1|1.0e-6953.62PREDICTED: uncharacterized protein LOC105631825 [Jatropha curcas][more]
gi|641856294|gb|KDO75074.1|1.2e-6854.89hypothetical protein CISIN_1g025624mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0006364 rRNA processing
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006098 pentose-phosphate shunt
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0016117 carotenoid biosynthetic process
biological_process GO:0009073 aromatic amino acid family biosynthetic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0016020 membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0051744 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity
molecular_function GO:0033728 divinyl chlorophyllide a 8-vinyl-reductase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG05G005800.1ClCG05G005800.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 3..46
score: 2.
IPR001810F-box domainSMARTSM00256fbox_2coord: 6..46
score: 0.
IPR001810F-box domainPROFILEPS50181FBOXcoord: 1..46
score: 8
IPR001810F-box domainunknownSSF81383F-box domaincoord: 3..80
score: 4.45
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 3..79
score: 8.
NoneNo IPR availablePANTHERPTHR16008FAMILY NOT NAMEDcoord: 5..240
score: 1.1
NoneNo IPR availablePANTHERPTHR16008:SF5SUBFAMILY NOT NAMEDcoord: 5..240
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG05G005800Csa3G151470Cucumber (Chinese Long) v2cuwcgB222
ClCG05G005800MELO3C006607Melon (DHL92) v3.5.1mewcgB427
ClCG05G005800Cla021705Watermelon (97103) v1wcgwmB286
ClCG05G005800Cla97C05G087240Watermelon (97103) v2wcgwmbB229
ClCG05G005800Bhi01G000677Wax gourdwcgwgoB426
ClCG05G005800CSPI03G13930Wild cucumber (PI 183967)cpiwcgB226
ClCG05G005800Cucsa.253560Cucumber (Gy14) v1cgywcgB451
ClCG05G005800CmaCh14G016430Cucurbita maxima (Rimu)cmawcgB233
ClCG05G005800CmaCh06G014670Cucurbita maxima (Rimu)cmawcgB737
ClCG05G005800CmoCh06G014670Cucurbita moschata (Rifu)cmowcgB743
ClCG05G005800CmoCh14G016860Cucurbita moschata (Rifu)cmowcgB219
ClCG05G005800Lsi05G015030Bottle gourd (USVL1VR-Ls)lsiwcgB333
ClCG05G005800Cp4.1LG03g11270Cucurbita pepo (Zucchini)cpewcgB559
ClCG05G005800Cp4.1LG08g04650Cucurbita pepo (Zucchini)cpewcgB787
ClCG05G005800CsGy3G014050Cucumber (Gy14) v2cgybwcgB203
ClCG05G005800MELO3C006607.2Melon (DHL92) v3.6.1medwcgB416
ClCG05G005800Carg20136Silver-seed gourdcarwcgB0807
ClCG05G005800Carg17368Silver-seed gourdcarwcgB0588
ClCG05G005800CsaV3_3G014150Cucumber (Chinese Long) v3cucwcgB225
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG05G005800Wax gourdwcgwgoB415
ClCG05G005800Wax gourdwcgwgoB418
ClCG05G005800Watermelon (Charleston Gray)wcgwcgB160
ClCG05G005800Cucumber (Gy14) v1cgywcgB618
ClCG05G005800Cucurbita maxima (Rimu)cmawcgB320
ClCG05G005800Cucurbita maxima (Rimu)cmawcgB796
ClCG05G005800Cucurbita moschata (Rifu)cmowcgB316
ClCG05G005800Cucurbita moschata (Rifu)cmowcgB792
ClCG05G005800Wild cucumber (PI 183967)cpiwcgB496
ClCG05G005800Cucumber (Chinese Long) v2cuwcgB472
ClCG05G005800Melon (DHL92) v3.5.1mewcgB121
ClCG05G005800Watermelon (97103) v1wcgwmB311
ClCG05G005800Cucurbita pepo (Zucchini)cpewcgB139
ClCG05G005800Cucurbita pepo (Zucchini)cpewcgB291
ClCG05G005800Bottle gourd (USVL1VR-Ls)lsiwcgB017
ClCG05G005800Cucumber (Gy14) v2cgybwcgB433
ClCG05G005800Melon (DHL92) v3.6.1medwcgB115
ClCG05G005800Silver-seed gourdcarwcgB0072
ClCG05G005800Silver-seed gourdcarwcgB0317
ClCG05G005800Cucumber (Chinese Long) v3cucwcgB492
ClCG05G005800Watermelon (97103) v2wcgwmbB238