Cp4.1LG08g03700 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTGCACCTCACCCTTCTCTTTCACTCTCATGAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCTCCTTCTTCGTTCCTTTCCCATGGCGAATTCCTCCCGTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAGTTCCTCAAATTTCGATTTCTCCAGCGATTGACCCGATCACTCCGCCAGAGCTTCCGCCAATAACTCCCGGGCCGGATTTTCCTGGATTACCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTACCGCCGCCGCCACCGGAGTTTCCGCCACCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTAGCTATGTTTTGA ATGTCCTGCACCTCACCCTTCTCTTTCACTCTCATGAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCTCCTTCTTCGTTCCTTTCCCATGGCGAATTCCTCCCGTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAGTTCCTCAAATTTCGATTTCTCCAGCGATTGACCCGATCACTCCGCCAGAGCTTCCGCCAATAACTCCCGGGCCGGATTTTCCTGGATTACCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTACCGCCGCCGCCACCGGAGTTTCCGCCACCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTAGCTATGTTTTGA ATGTCCTGCACCTCACCCTTCTCTTTCACTCTCATGAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCTCCTTCTTCGTTCCTTTCCCATGGCGAATTCCTCCCGTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAGTTCCTCAAATTTCGATTTCTCCAGCGATTGACCCGATCACTCCGCCAGAGCTTCCGCCAATAACTCCCGGGCCGGATTTTCCTGGATTACCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTACCGCCGCCGCCACCGGAGTTTCCGCCACCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTAGCTATGTTTTGA MSCTSPFSFTLMRKTLPIYYSSSSPSSFLSHGEFLPFKNSAPLSRFLLVGDSPEFPQKSPIPEPSVPLEVPQISISPAIDPITPPELPPITPGPDFPGLPSPLPPGPDLPVPPVPSPPGIDVPIPPHKPPDIEPPRPGSPVPEPDILPPPPPEFPPPRPPGPEILTSPSSPDIPPVAMF
BLAST of Cp4.1LG08g03700 vs. Swiss-Prot
Match: GP1_CHLRE (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii GN=GP1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.0e-06 Identity = 58/127 (45.67%), Postives = 62/127 (48.82%), Query Frame = 1
BLAST of Cp4.1LG08g03700 vs. TrEMBL
Match: A0A0A0L4M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144200 PE=4 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.3e-39 Identity = 116/182 (63.74%), Postives = 128/182 (70.33%), Query Frame = 1
BLAST of Cp4.1LG08g03700 vs. TrEMBL
Match: A0A166H4D3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002360 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.2e-06 Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 1
BLAST of Cp4.1LG08g03700 vs. NCBI nr
Match: gi|700201797|gb|KGN56930.1| (hypothetical protein Csa_3G144200 [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 1.9e-39 Identity = 116/182 (63.74%), Postives = 128/182 (70.33%), Query Frame = 1
BLAST of Cp4.1LG08g03700 vs. NCBI nr
Match: gi|645235327|ref|XP_008224213.1| (PREDICTED: vegetative cell wall protein gp1 [Prunus mume]) HSP 1 Score: 69.7 bits (169), Expect = 5.8e-09 Identity = 80/191 (41.88%), Postives = 104/191 (54.45%), Query Frame = 1
BLAST of Cp4.1LG08g03700 vs. NCBI nr
Match: gi|694418606|ref|XP_009337298.1| (PREDICTED: vegetative cell wall protein gp1-like [Pyrus x bretschneideri]) HSP 1 Score: 60.1 bits (144), Expect = 4.6e-06 Identity = 60/130 (46.15%), Postives = 70/130 (53.85%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |