CmoCh06G013690 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCTGCACCTCTCCCTTCTCTTTCACTCTCATAAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCCTCTTCCAATCTGGTGATCCCTTCGTTCCCTTCCCATGGCGAATTCCTCCCCTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAATTCCTCAAATTTCGACTTCTCCAGAGATTGACCCGATCACTCCGCCAGAGCTTCCGCCGTTAACTCCCGGGCCGGATTTTCCTGGATTGCCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTGCCGCCGCCACCACCGGAGTTTCCACCGCCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTATCTATGTTTTGA ATGTCCTGCACCTCTCCCTTCTCTTTCACTCTCATAAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCCTCTTCCAATCTGGTGATCCCTTCGTTCCCTTCCCATGGCGAATTCCTCCCCTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAATTCCTCAAATTTCGACTTCTCCAGAGATTGACCCGATCACTCCGCCAGAGCTTCCGCCGTTAACTCCCGGGCCGGATTTTCCTGGATTGCCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTGCCGCCGCCACCACCGGAGTTTCCACCGCCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTATCTATGTTTTGA ATGTCCTGCACCTCTCCCTTCTCTTTCACTCTCATAAGGAAAACGCTTCCCATTTATTATTCTTCGTCTTCCTCTTCCAATCTGGTGATCCCTTCGTTCCCTTCCCATGGCGAATTCCTCCCCTTTAAAAACTCTGCGCCTCTCTCGCGTTTTCTGCTTGTCGGGGACTCGCCGGAGTTTCCCCAAAAGAGCCCCATTCCGGAGCCTTCTGTCCCCCTCGAAATTCCTCAAATTTCGACTTCTCCAGAGATTGACCCGATCACTCCGCCAGAGCTTCCGCCGTTAACTCCCGGGCCGGATTTTCCTGGATTGCCGTCTCCCTTGCCTCCCGGACCCGACTTACCAGTTCCGCCGGTTCCATCCCCTCCAGGCATCGACGTACCCATACCACCCCATAAGCCTCCAGATATAGAGCCGCCAAGGCCTGGGTCGCCGGTGCCAGAACCGGACATATTGCCGCCGCCACCACCGGAGTTTCCACCGCCGAGGCCTCCCGGTCCGGAGATATTGACGTCACCGTCTTCCCCTGATATTCCTCCGGTATCTATGTTTTGA
BLAST of CmoCh06G013690 vs. TrEMBL
Match: A0A0A0L4M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144200 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41 Identity = 119/183 (65.03%), Postives = 131/183 (71.58%), Query Frame = 1
BLAST of CmoCh06G013690 vs. TrEMBL
Match: A0A166H4D3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_002360 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 3.9e-07 Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 1
BLAST of CmoCh06G013690 vs. TAIR10
Match: AT5G43770.1 (AT5G43770.1 proline-rich family protein) HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06 Identity = 67/155 (43.23%), Postives = 76/155 (49.03%), Query Frame = 1
BLAST of CmoCh06G013690 vs. NCBI nr
Match: gi|700201797|gb|KGN56930.1| (hypothetical protein Csa_3G144200 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 2.0e-41 Identity = 119/183 (65.03%), Postives = 131/183 (71.58%), Query Frame = 1
BLAST of CmoCh06G013690 vs. NCBI nr
Match: gi|645235327|ref|XP_008224213.1| (PREDICTED: vegetative cell wall protein gp1 [Prunus mume]) HSP 1 Score: 73.9 bits (180), Expect = 3.2e-10 Identity = 79/194 (40.72%), Postives = 105/194 (54.12%), Query Frame = 1
BLAST of CmoCh06G013690 vs. NCBI nr
Match: gi|694418606|ref|XP_009337298.1| (PREDICTED: vegetative cell wall protein gp1-like [Pyrus x bretschneideri]) HSP 1 Score: 67.4 bits (163), Expect = 3.0e-08 Identity = 71/163 (43.56%), Postives = 85/163 (52.15%), Query Frame = 1
BLAST of CmoCh06G013690 vs. NCBI nr
Match: gi|1021051926|gb|KZN09704.1| (hypothetical protein DCAR_002360 [Daucus carota subsp. sativus]) HSP 1 Score: 63.2 bits (152), Expect = 5.6e-07 Identity = 57/129 (44.19%), Postives = 75/129 (58.14%), Query Frame = 1
BLAST of CmoCh06G013690 vs. NCBI nr
Match: gi|698529722|ref|XP_009761679.1| (PREDICTED: proline-rich protein 2-like [Nicotiana sylvestris]) HSP 1 Score: 63.2 bits (152), Expect = 5.6e-07 Identity = 78/205 (38.05%), Postives = 104/205 (50.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |