Cp4.1LG08g01260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionReticulon-like protein
LocationCp4.1LG08 : 3680188 .. 3682454 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATCCAATTGTCATTCTTGCTTCCATTTTCGTTACTTTTCAAATTCCTTCAACTCTTCTTCTAAAACCCTAGTCTCTCTCTCTCTCTCTGCATCGAGTTGCTTGATTTTTCTTCTTCAGATCTTGGTCACTGCAATCGATCAATCATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACGTACGGAATCTCACCTCTCTGATTTGAACTCATTGAATAATTGTTTTGTTTTTTTCTATTACATTTCCTAAGTTTTACACTGCTTCTATTCGTTTTGTTCGACCTTCGTCTTGATTGGTGTTTCTTAGGCTTCTTTTTGCTCTTTGGATTCGTTCTAGCTTGTTTCCCTATTCTTTGCTTGGATTTAGAATATATAAATAATTAGAAATTATAGATCTGCTTGCTTTACCTTACTGTGACTCATTGATAGTTCAGATCGAGTGTACGCTATAATTGAGTGATTCATTGAGCTTCCAGAGCAGAGTATTTATTATATTCATTGATAGTTCAGATCGAGCGTACGCTATAATAGAGTGATTCATTGAGCTTCCAGAACAGAGTATTTATTATTTTCTTCCCCGAACTTGTTATATTTGTTCCTTGTCCCGGTTTCGATACTTCTACTTCATTTTTTTTCTGCGTTGCACATTTCTGATTTCACATTTGAATATGTTCTGATGACGATACTTGTCTTGCTTAAGTCGTATGGTACTTTATTTTTTGTTTGGCGGTTGGTAATGTTGATGACCGTTTCTGGCCCCTGTTGCATATGCAGCTGCTGATTTATTGTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACATTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAAGTGAGTTACTGAATCTCAACTTCCTTTTATCAATAATTAAGTTTCTAGCGACTTCAAATTATGCTCTTCTTTCCACTGTTTAACAAATGTAGTTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCAACTGGAAGAGATTTGAAGAAATTCATCACTGTACGTATCTGCTATTGATGCACTCTATTTGTCTTTTTATTGTGGTTATTTTACTTGTTGGGTTTATCTCAACTCTCAAGTAGCAACCGAGCCTGAACAAGTTGCAACTTAATATATATACCTTGATTGGACTACAGATTCGACCATAATACTTAATATGCTAATTTGTAGTCTCAGATATCGAAGTTAGAGTAATTGAATTTTATCTAGATTATAGAAATGTTATGTCTCTGTATCAGGCAATCGCTGGCTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGCTGTTCTACATAAGTAACGACAACTCGAACTCTATCTTCATATTTATAGCCATCTTTTTATCATCCTTTGTTGATTCTGACGTTTGACAACAACTTTGAAAACGCAGACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTACGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAAACTGGGTCTGGTTGGGTGTCTTCTTCCCTCACAAAAAAGCGGTAACCACATGCTTATTGATCTCTTTCTCGTTGTCTTTTGGCTGCACTCATCCATCATAGTATAGTTGTTGTTCAATCACAAGGGTGGTTTTCGCAATTTAGTGGGTTTGTTCTACAAATGTTGAATTTGTAAGTTATGTTATAAGTTATATGGGAACTTTCATGAGGGGAAGTACTTTTGTTTGTGGTTAGCTTAGCTAATTTTATATACTTTTTTTTTCTCTCTTTCGTTCCAATTTGGGTGATGCCTTGAGGGAAAGAATTATTAAACTAATTTTAATAATATTCAAACTTTTGAATTGAAA

mRNA sequence

TATCCAATTGTCATTCTTGCTTCCATTTTCGTTACTTTTCAAATTCCTTCAACTCTTCTTCTAAAACCCTAGTCTCTCTCTCTCTCTCTGCATCGAGTTGCTTGATTTTTCTTCTTCAGATCTTGGTCACTGCAATCGATCAATCATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACCTGCTGATTTATTGTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACATTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAATTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCAACTGGAAGAGATTTGAAGAAATTCATCACTGCAATCGCTGGCTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGCTGTTCTACATAAACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTACGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAAACTGGGTCTGGTTGGGTGTCTTCTTCCCTCACAAAAAAGCGGTAACCACATGCTTATTGATCTCTTTCTCGTTGTCTTTTGGCTGCACTCATCCATCATAGTATAGTTGTTGTTCAATCACAAGGGTGGTTTTCGCAATTTAGTGGGTTTGTTCTACAAATGTTGAATTTGTAAGTTATGTTATAAGTTATATGGGAACTTTCATGAGGGGAAGTACTTTTGTTTGTGGTTAGCTTAGCTAATTTTATATACTTTTTTTTTCTCTCTTTCGTTCCAATTTGGGTGATGCCTTGAGGGAAAGAATTATTAAACTAATTTTAATAATATTCAAACTTTTGAATTGAAA

Coding sequence (CDS)

ATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACCTGCTGATTTATTGTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACATTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAATTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCAACTGGAAGAGATTTGAAGAAATTCATCACTGCAATCGCTGGCTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGCTGTTCTACATAAACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTACGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAA

Protein sequence

MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSETEGSLKEKVFRLFGRERPVHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIPKGPLKGKKA
Homology
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BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-79
Identity = 159/252 (63.10%), Postives = 187/252 (74.21%), Query Frame = 1 

Query: 13  ESLIDKIVEKIH---DHDSSSSGSDSETE-----------GSLKEKVFRLFGRERPVHHV 72
           ESL+DKI EKIH   D  SSSS SD E E            S+K KV+RLFGRE+PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 73  FGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNA 132
            GGGKPAD+ +W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGL 192
             FI   +SPP+IPEV +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKF+ AIAGL
Sbjct: 144 TMFIN--KSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGL 203

Query: 193 WVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL 251
           WVLSI+G   NFLTL YI  VLL TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVL
Sbjct: 204 WVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVL 263

[Close]
BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.6e-76
Identity = 149/254 (58.66%), Postives = 189/254 (74.41%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSETE-----GSLKEKVFRLFGRERPV 60
           MA+  +      ESL++KI EKIH HDSSSS S+SE E      ++K K++R+FGRE+PV
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSS-SESEYEKPDSPSAVKAKIYRMFGREKPV 60

Query: 61  HHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLW 120
           H V GGGKPAD+ LWR+KK+S  VL  AT IWV FEL+E HLL+ +    IL+LG LFLW
Sbjct: 61  HKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLW 120

Query: 121 SNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAI 180
           SNAHT I   ++ P+IPE+ +P + FL  AS+LR E+N  F +LR IA GRDLKKF+  +
Sbjct: 121 SNAHTLIN--KTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 180

Query: 181 AGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEE 240
            GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DPLAEKA+ E +K Y VF+E
Sbjct: 181 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 240

Query: 241 KVLSKIPKGPLKGK 250
           KVLSKIP   LK K
Sbjct: 241 KVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 4.6e-76
Identity = 149/254 (58.66%), Postives = 186/254 (73.23%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSETE-----GSLKEKVFRLFGRERPV 60
           MA+  +    K ESL++KI +KIHDHDSSSS SDSE E      +LK K++RLFGRE+PV
Sbjct: 1   MAEELEKSMHKEESLMEKIADKIHDHDSSSS-SDSEHEKPESPSALKAKIYRLFGREKPV 60

Query: 61  HHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLW 120
           H V GGG PAD+ LWR+KK+SA VL  AT IWV FEL+E H L+ V   LI +L  LFL 
Sbjct: 61  HKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLL 120

Query: 121 SNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAI 180
           SNAH F+   ++PP+IPE+ +  + FL   S LR E+N  F +LR IA GRDLKKF+  +
Sbjct: 121 SNAHAFMN--KTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVV 180

Query: 181 AGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEE 240
            GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DP+AEK L E KKHY VF+E
Sbjct: 181 FGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDE 240

Query: 241 KVLSKIPKGPLKGK 250
           KVLSK+P   LK K
Sbjct: 241 KVLSKLPVASLKAK 251

[Close]
BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 147/248 (59.27%), Postives = 183/248 (73.79%), Query Frame = 1 

Query: 13  ESLIDKIVEKIHDHDSSSSGSDSETEG----------SLKEKVFRLFGRERPVHHVFGGG 72
           ESL++K+ EKIH    SSS S S+ E           SLK KV+RLFGRERPVH V GGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFI 132
           KPAD+ +W++KK+S GV  GATV WV FEL+E HLLT +   +I++L +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLS 192
           +  +SPP+IPEV +P +P L+ AS LR EIN G + LR+IA+GRD+KKF++AIAGLWVLS
Sbjct: 144 H--KSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLS 203

Query: 193 IVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIP 251
           I+G   +FLTL YI  VLL TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP
Sbjct: 204 ILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 263

[Close]
BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 8.6e-75
Identity = 151/250 (60.40%), Postives = 177/250 (70.80%), Query Frame = 1 

Query: 13  ESLIDKIVEKIHDHDSSSSGSDSETE--------GSLKEKVFRLFGRERPVHHVFGGGKP 72
           ES+++KIVEKIH H  SSS SDS+ +         S K K++RLFGRE+PVH V GGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 73  ADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYN 132
           AD+ LWRNKK+S GVL   T  WV FEL E HLL F+    I +L  LFLWSNA TFI+ 
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIH- 128

Query: 133 YRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIV 192
            +S P IPEV +P DP L+  S LR EIN G  LLR+IA+G+D+KKFI  IAGLWVLSI+
Sbjct: 129 -KSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSII 188

Query: 193 GSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL----SK 251
           GS  NFLTLFY   VLL T+PVLYEKYEDK+D   EKA+ E KK YAV +EKVL    SK
Sbjct: 189 GSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISK 248

[Close]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match: A0A0A0L627_CUCSA (Reticulon-like protein OS=Cucumis sativus GN=Csa_3G121020 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 6.5e-122
Identity = 227/257 (88.33%), Postives = 241/257 (93.77%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSS-GSDSETEGS-----LKEKVFRLFGRERP 60
           M+DH++  E KSESLIDKIVEKIHDHDSSSS GSD+ETEGS     LKEKVFR+FGRERP
Sbjct: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHV GGGKPADL LWRNKKISAGVL+GAT+IWVFFELLECHLLTF+SRSLIL+LGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFIY  +SPPRIP VQLPADPFLEFAS LRAEINCGFALLRDIATGRDLKKF+TA
Sbjct: 121 WSNAHTFIY--KSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLL+TVPV+YEKYEDKIDPLAEKA+IEFKKHYAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match: A0A151RYH5_CAJCA (Reticulon-like protein OS=Cajanus cajan GN=KK1_030714 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 5.8e-94
Identity = 178/247 (72.06%), Postives = 204/247 (82.59%), Query Frame = 1 

Query: 12  SESLIDKIVEKIHDHDSSSSGSDSETEG--------SLKEKVFRLFGRERPVHHVFGGGK 71
           +ESL+DKI EK+H HDSSSS S S+++         S+K+KVFRLFGRERPVH VFG GK
Sbjct: 15  AESLLDKISEKLHGHDSSSSSSSSDSDSDSEKTVTSSVKDKVFRLFGRERPVHSVFGAGK 74

Query: 72  PADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIY 131
           PAD+LLWRNKKISAGVL GAT +WV FELLE HLLT VS  LIL L +LFLWSNAHTFI+
Sbjct: 75  PADVLLWRNKKISAGVLGGATAVWVLFELLEYHLLTLVSHILILLLAVLFLWSNAHTFIH 134

Query: 132 NYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSI 191
             +SPPRIPEV LP +PFL+ AS L AEIN GFA+L +I +GRDLKKF+  IAG+W+LSI
Sbjct: 135 --KSPPRIPEVHLPQEPFLQVASALLAEINRGFAVLHNIGSGRDLKKFLVVIAGVWILSI 194

Query: 192 VGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIPK 251
           +G+WCNFLTLFYI F+LLHTVPVLYEKYEDKIDPLAEKA+ E KK Y VF+ KVLSKIP 
Sbjct: 195 LGNWCNFLTLFYITFILLHTVPVLYEKYEDKIDPLAEKAVFEIKKQYVVFDAKVLSKIPA 254

[Close]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match: I1KI22_SOYBN (Reticulon-like protein OS=Glycine max GN=GLYMA_07G062600 PE=4 SV=2)

HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93
Identity = 181/256 (70.70%), Postives = 207/256 (80.86%), Query Frame = 1 

Query: 1   MADHSDNVESKS--ESLIDKIVEKIHDHDSSSSGSDSETE----GSLKEKVFRLFGRERP 60
           MAD S++  + +  ESL+DKI EKIH HD SSS SDS+++     S+KEKVFRLFGRE+P
Sbjct: 59  MADESEHTAAPAAGESLLDKIAEKIHGHDDSSSSSDSDSDKKESSSIKEKVFRLFGREKP 118

Query: 61  VHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VH V GGGKPAD+LLWRNKKISAGVL  AT IW+FFELLE HLLT V    IL L +LFL
Sbjct: 119 VHSVLGGGKPADVLLWRNKKISAGVLGVATAIWIFFELLEYHLLTLVCHISILLLAVLFL 178

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI+  ++PPRIP V +P +P L+FAS L  EIN GFA LR I +GRDLK F+  
Sbjct: 179 WSNAHTFIH--KAPPRIPVVHIPEEPILQFASALTIEINRGFAALRAIGSGRDLKTFLIV 238

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           I G W++SIVGSWCNFLTLFYI FVLLHTVPVLY+KYEDKIDPLAEKAL+EFKK YAVF+
Sbjct: 239 IVGTWIISIVGSWCNFLTLFYIAFVLLHTVPVLYDKYEDKIDPLAEKALVEFKKQYAVFD 298

Query: 241 EKVLSKIPKGPLKGKK 251
           EKVLSKIPKGPLK KK
Sbjct: 299 EKVLSKIPKGPLKEKK 312

[Close]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match: A0A0D2ML17_GOSRA (Reticulon-like protein OS=Gossypium raimondii GN=B456_003G084400 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.4e-93
Identity = 183/254 (72.05%), Postives = 206/254 (81.10%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSE----TEGSLKEKVFRLFGRERPVH 60
           MA+H +  + + ESL++KI EKIH HDSSSS SDS+    +E S+K+KVFRLFGRE+PVH
Sbjct: 1   MAEHEE--KKQEESLMEKIAEKIHGHDSSSSSSDSDDDKPSESSIKDKVFRLFGREKPVH 60

Query: 61  HVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
           HVFGGGKPAD+LLWRNKKISAG L  ATVIWV FELLE HLLT V   LIL+L LLFLWS
Sbjct: 61  HVFGGGKPADILLWRNKKISAGALGVATVIWVLFELLEYHLLTLVCHLLILALALLFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NA  FI   +S P IPEVQ+P +P LEF   LR EIN  FA+LRDIA GRDLK F++ IA
Sbjct: 121 NATQFIN--KSTPHIPEVQIPKEPVLEFVMALRFEINRAFAVLRDIALGRDLKMFLSVIA 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLWVLSIVGSWCNFLTLFYI FVLLHTVPVLYEKYEDK+DP AEKA+ E KK YAVF+ K
Sbjct: 181 GLWVLSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDKVDPFAEKAMHEIKKQYAVFDAK 240

Query: 241 VLSKIPKGPLKGKK 251
           VLSKIP+GPLK KK
Sbjct: 241 VLSKIPRGPLKQKK 250

[Close]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match: A0A0B0N8Z9_GOSAR (Reticulon-like protein OS=Gossypium arboreum GN=F383_09671 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 1.9e-92
Identity = 183/254 (72.05%), Postives = 205/254 (80.71%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSE----TEGSLKEKVFRLFGRERPVH 60
           MA+H +  +   ESL++KI EKIH HDSSSS SDS+    +E S+K+KVFRLFGRE+PVH
Sbjct: 1   MAEHEE--KKHEESLMEKIAEKIHGHDSSSSSSDSDDDKQSESSIKDKVFRLFGREKPVH 60

Query: 61  HVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
           HVFGGGKPAD+LLWRNKKISAG L  ATVIWV FELLE HLLT V   LIL+L LLFLWS
Sbjct: 61  HVFGGGKPADILLWRNKKISAGALGVATVIWVLFELLEYHLLTLVCHLLILALALLFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NA  FI   +S P IPEVQ+P +P LEFA  LR EIN  FA+LRDIA GRDLK F++ IA
Sbjct: 121 NATQFIN--KSTPHIPEVQIPKEPVLEFAMALRFEINRAFAVLRDIALGRDLKMFLSVIA 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLWVLSIVGSWCNFLTLFYI FV+LHTVPVLYEKYEDK+DP AEKA+ E KK YAVF+ K
Sbjct: 181 GLWVLSIVGSWCNFLTLFYIVFVVLHTVPVLYEKYEDKVDPFAEKAMHEIKKQYAVFDAK 240

Query: 241 VLSKIPKGPLKGKK 251
           VLSKIP GPLK KK
Sbjct: 241 VLSKIPMGPLKQKK 250

[Close]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match: AT4G23630.1 (AT4G23630.1 VIRB2-interacting protein 1)

HSP 1 Score: 297.0 bits (759), Expect = 1.1e-80
Identity = 159/252 (63.10%), Postives = 187/252 (74.21%), Query Frame = 1 

Query: 13  ESLIDKIVEKIH---DHDSSSSGSDSETE-----------GSLKEKVFRLFGRERPVHHV 72
           ESL+DKI EKIH   D  SSSS SD E E            S+K KV+RLFGRE+PVH V
Sbjct: 24  ESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPSSPSSSMKSKVYRLFGREQPVHKV 83

Query: 73  FGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNA 132
            GGGKPAD+ +W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGL 192
             FI   +SPP+IPEV +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKF+ AIAGL
Sbjct: 144 TMFIN--KSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGL 203

Query: 193 WVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL 251
           WVLSI+G   NFLTL YI  VLL TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVL
Sbjct: 204 WVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVL 263

[Close]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match: AT2G46170.1 (AT2G46170.1 Reticulon family protein)

HSP 1 Score: 285.8 bits (730), Expect = 2.6e-77
Identity = 149/254 (58.66%), Postives = 189/254 (74.41%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSETE-----GSLKEKVFRLFGRERPV 60
           MA+  +      ESL++KI EKIH HDSSSS S+SE E      ++K K++R+FGRE+PV
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHHHDSSSS-SESEYEKPDSPSAVKAKIYRMFGREKPV 60

Query: 61  HHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLW 120
           H V GGGKPAD+ LWR+KK+S  VL  AT IWV FEL+E HLL+ +    IL+LG LFLW
Sbjct: 61  HKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLW 120

Query: 121 SNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAI 180
           SNAHT I   ++ P+IPE+ +P + FL  AS+LR E+N  F +LR IA GRDLKKF+  +
Sbjct: 121 SNAHTLIN--KTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVV 180

Query: 181 AGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEE 240
            GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DPLAEKA+ E +K Y VF+E
Sbjct: 181 VGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDE 240

Query: 241 KVLSKIPKGPLKGK 250
           KVLSKIP   LK K
Sbjct: 241 KVLSKIPIASLKAK 251

[Close]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match: AT4G11220.1 (AT4G11220.1 VIRB2-interacting protein 2)

HSP 1 Score: 283.9 bits (725), Expect = 9.8e-77
Identity = 147/248 (59.27%), Postives = 183/248 (73.79%), Query Frame = 1 

Query: 13  ESLIDKIVEKIHDHDSSSSGSDSETEG----------SLKEKVFRLFGRERPVHHVFGGG 72
           ESL++K+ EKIH    SSS S S+ E           SLK KV+RLFGRERPVH V GGG
Sbjct: 24  ESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFI 132
           KPAD+ +W++KK+S GV  GATV WV FEL+E HLLT +   +I++L +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLS 192
           +  +SPP+IPEV +P +P L+ AS LR EIN G + LR+IA+GRD+KKF++AIAGLWVLS
Sbjct: 144 H--KSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLS 203

Query: 193 IVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIP 251
           I+G   +FLTL YI  VLL TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP
Sbjct: 204 ILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 263

[Close]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match: AT5G41600.1 (AT5G41600.1 VIRB2-interacting protein 3)

HSP 1 Score: 281.6 bits (719), Expect = 4.8e-76
Identity = 151/250 (60.40%), Postives = 177/250 (70.80%), Query Frame = 1 

Query: 13  ESLIDKIVEKIHDHDSSSSGSDSETE--------GSLKEKVFRLFGRERPVHHVFGGGKP 72
           ES+++KIVEKIH H  SSS SDS+ +         S K K++RLFGRE+PVH V GGGKP
Sbjct: 9   ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFGREKPVHKVLGGGKP 68

Query: 73  ADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYN 132
           AD+ LWRNKK+S GVL   T  WV FEL E HLL F+    I +L  LFLWSNA TFI+ 
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIH- 128

Query: 133 YRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIV 192
            +S P IPEV +P DP L+  S LR EIN G  LLR+IA+G+D+KKFI  IAGLWVLSI+
Sbjct: 129 -KSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSII 188

Query: 193 GSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL----SK 251
           GS  NFLTLFY   VLL T+PVLYEKYEDK+D   EKA+ E KK YAV +EKVL    SK
Sbjct: 189 GSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISK 248

[Close]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match: AT1G64090.2 (AT1G64090.2 Reticulan like protein B3)

HSP 1 Score: 267.7 bits (683), Expect = 7.2e-72
Identity = 148/256 (57.81%), Postives = 176/256 (68.75%), Query Frame = 1 

Query: 13  ESLIDKIVEKIHDHDSSSSGS----DSETEGSLKEKVFRLFGRERPVHHVFGGGK----- 72
           ES+++KI EKIH HD SSS S    D +   SLK K++RLFGRE+P+H +FGGGK     
Sbjct: 9   ESIMEKISEKIHGHDDSSSSSSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKHSENQ 68

Query: 73  -----------PADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLL 132
                       AD+ LWRNKK+S GVL  ATV W+ FELLE +LLT      IL+L +L
Sbjct: 69  DINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVL 128

Query: 133 FLWSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFI 192
           FLWS+A TFI+  +SP  IPEV +P D  L+ AS LR EIN GF +LRDIA+GRDLKKF+
Sbjct: 129 FLWSSASTFIH--KSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFL 188

Query: 193 TAIAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAV 245
             IAGLWVLS VGS CNFLTL YI  VLL T+PVLYEKYEDK+D   EKA+ E KK Y  
Sbjct: 189 LVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVE 248

[Close]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match: gi|659075127|ref|XP_008437980.1| (PREDICTED: reticulon-like protein B5 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 3.2e-122
Identity = 228/257 (88.72%), Postives = 242/257 (94.16%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSS-GSDSETEGS-----LKEKVFRLFGRERP 60
           M+DH++N E KSESLIDKIVEKIHDHDSSSS GSD+ETEGS     LKEKVFR+FGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHV GGGKPADL LWRNKKISAGVL+GAT+IWVFFELLECHLLTF+SRSLIL+LGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFIY  +SPPRIP VQLPADPF+EFASTLRAEINCGFALLRDIATGRDLKKF+TA
Sbjct: 121 WSNAHTFIY--KSPPRIPVVQLPADPFMEFASTLRAEINCGFALLRDIATGRDLKKFLTA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLLHTVPV+YEKYEDKIDPLAEKA+IEFKK YAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKLYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match: gi|449432104|ref|XP_004133840.1| (PREDICTED: reticulon-like protein B1 [Cucumis sativus])

HSP 1 Score: 444.9 bits (1143), Expect = 9.4e-122
Identity = 227/257 (88.33%), Postives = 241/257 (93.77%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSS-GSDSETEGS-----LKEKVFRLFGRERP 60
           M+DH++  E KSESLIDKIVEKIHDHDSSSS GSD+ETEGS     LKEKVFR+FGRERP
Sbjct: 1   MSDHAETAEPKSESLIDKIVEKIHDHDSSSSSGSDAETEGSASSSTLKEKVFRIFGRERP 60

Query: 61  VHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHV GGGKPADL LWRNKKISAGVL+GAT+IWVFFELLECHLLTF+SRSLIL+LGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFIY  +SPPRIP VQLPADPFLEFAS LRAEINCGFALLRDIATGRDLKKF+TA
Sbjct: 121 WSNAHTFIY--KSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLL+TVPV+YEKYEDKIDPLAEKA+IEFKKHYAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match: gi|1012336304|gb|KYP47608.1| (Reticulon-like protein B5 [Cajanus cajan])

HSP 1 Score: 352.1 bits (902), Expect = 8.3e-94
Identity = 178/247 (72.06%), Postives = 204/247 (82.59%), Query Frame = 1 

Query: 12  SESLIDKIVEKIHDHDSSSSGSDSETEG--------SLKEKVFRLFGRERPVHHVFGGGK 71
           +ESL+DKI EK+H HDSSSS S S+++         S+K+KVFRLFGRERPVH VFG GK
Sbjct: 15  AESLLDKISEKLHGHDSSSSSSSSDSDSDSEKTVTSSVKDKVFRLFGRERPVHSVFGAGK 74

Query: 72  PADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIY 131
           PAD+LLWRNKKISAGVL GAT +WV FELLE HLLT VS  LIL L +LFLWSNAHTFI+
Sbjct: 75  PADVLLWRNKKISAGVLGGATAVWVLFELLEYHLLTLVSHILILLLAVLFLWSNAHTFIH 134

Query: 132 NYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSI 191
             +SPPRIPEV LP +PFL+ AS L AEIN GFA+L +I +GRDLKKF+  IAG+W+LSI
Sbjct: 135 --KSPPRIPEVHLPQEPFLQVASALLAEINRGFAVLHNIGSGRDLKKFLVVIAGVWILSI 194

Query: 192 VGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIPK 251
           +G+WCNFLTLFYI F+LLHTVPVLYEKYEDKIDPLAEKA+ E KK Y VF+ KVLSKIP 
Sbjct: 195 LGNWCNFLTLFYITFILLHTVPVLYEKYEDKIDPLAEKAVFEIKKQYVVFDAKVLSKIPA 254

[Close]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match: gi|571465124|ref|XP_003528823.2| (PREDICTED: reticulon-like protein B5 [Glycine max])

HSP 1 Score: 349.7 bits (896), Expect = 4.1e-93
Identity = 181/256 (70.70%), Postives = 207/256 (80.86%), Query Frame = 1 

Query: 1   MADHSDNVESKS--ESLIDKIVEKIHDHDSSSSGSDSETE----GSLKEKVFRLFGRERP 60
           MAD S++  + +  ESL+DKI EKIH HD SSS SDS+++     S+KEKVFRLFGRE+P
Sbjct: 59  MADESEHTAAPAAGESLLDKIAEKIHGHDDSSSSSDSDSDKKESSSIKEKVFRLFGREKP 118

Query: 61  VHHVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VH V GGGKPAD+LLWRNKKISAGVL  AT IW+FFELLE HLLT V    IL L +LFL
Sbjct: 119 VHSVLGGGKPADVLLWRNKKISAGVLGVATAIWIFFELLEYHLLTLVCHISILLLAVLFL 178

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI+  ++PPRIP V +P +P L+FAS L  EIN GFA LR I +GRDLK F+  
Sbjct: 179 WSNAHTFIH--KAPPRIPVVHIPEEPILQFASALTIEINRGFAALRAIGSGRDLKTFLIV 238

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           I G W++SIVGSWCNFLTLFYI FVLLHTVPVLY+KYEDKIDPLAEKAL+EFKK YAVF+
Sbjct: 239 IVGTWIISIVGSWCNFLTLFYIAFVLLHTVPVLYDKYEDKIDPLAEKALVEFKKQYAVFD 298

Query: 241 EKVLSKIPKGPLKGKK 251
           EKVLSKIPKGPLK KK
Sbjct: 299 EKVLSKIPKGPLKEKK 312

[Close]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match: gi|823141406|ref|XP_012470522.1| (PREDICTED: reticulon-like protein B4 [Gossypium raimondii])

HSP 1 Score: 348.6 bits (893), Expect = 9.1e-93
Identity = 183/254 (72.05%), Postives = 206/254 (81.10%), Query Frame = 1 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSE----TEGSLKEKVFRLFGRERPVH 60
           MA+H +  + + ESL++KI EKIH HDSSSS SDS+    +E S+K+KVFRLFGRE+PVH
Sbjct: 1   MAEHEE--KKQEESLMEKIAEKIHGHDSSSSSSDSDDDKPSESSIKDKVFRLFGREKPVH 60

Query: 61  HVFGGGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
           HVFGGGKPAD+LLWRNKKISAG L  ATVIWV FELLE HLLT V   LIL+L LLFLWS
Sbjct: 61  HVFGGGKPADILLWRNKKISAGALGVATVIWVLFELLEYHLLTLVCHLLILALALLFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NA  FI   +S P IPEVQ+P +P LEF   LR EIN  FA+LRDIA GRDLK F++ IA
Sbjct: 121 NATQFIN--KSTPHIPEVQIPKEPVLEFVMALRFEINRAFAVLRDIALGRDLKMFLSVIA 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLWVLSIVGSWCNFLTLFYI FVLLHTVPVLYEKYEDK+DP AEKA+ E KK YAVF+ K
Sbjct: 181 GLWVLSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDKVDPFAEKAMHEIKKQYAVFDAK 240

Query: 241 VLSKIPKGPLKGKK 251
           VLSKIP+GPLK KK
Sbjct: 241 VLSKIPRGPLKQKK 250

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RTNLA_ARATH2.0e-7963.10Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1[more]
RTNLE_ARATH4.6e-7658.66Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1[more]
RTNLF_ARATH4.6e-7658.66Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1[more]
RTNLB_ARATH1.7e-7559.27Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1[more]
RTNLD_ARATH8.6e-7560.40Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1[more]
BLAST of Cp4.1LG08g01260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L627_CUCSA6.5e-12288.33Reticulon-like protein OS=Cucumis sativus GN=Csa_3G121020 PE=4 SV=1[more]
A0A151RYH5_CAJCA5.8e-9472.06Reticulon-like protein OS=Cajanus cajan GN=KK1_030714 PE=4 SV=1[more]
I1KI22_SOYBN2.9e-9370.70Reticulon-like protein OS=Glycine max GN=GLYMA_07G062600 PE=4 SV=2[more]
A0A0D2ML17_GOSRA6.4e-9372.05Reticulon-like protein OS=Gossypium raimondii GN=B456_003G084400 PE=4 SV=1[more]
A0A0B0N8Z9_GOSAR1.9e-9272.05Reticulon-like protein OS=Gossypium arboreum GN=F383_09671 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01260 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23630.11.1e-8063.10 VIRB2-interacting protein 1[more]
AT2G46170.12.6e-7758.66 Reticulon family protein[more]
AT4G11220.19.8e-7759.27 VIRB2-interacting protein 2[more]
AT5G41600.14.8e-7660.40 VIRB2-interacting protein 3[more]
AT1G64090.27.2e-7257.81 Reticulan like protein B3[more]
BLAST of Cp4.1LG08g01260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075127|ref|XP_008437980.1|3.2e-12288.72PREDICTED: reticulon-like protein B5 [Cucumis melo][more]
gi|449432104|ref|XP_004133840.1|9.4e-12288.33PREDICTED: reticulon-like protein B1 [Cucumis sativus][more]
gi|1012336304|gb|KYP47608.1|8.3e-9472.06Reticulon-like protein B5 [Cajanus cajan][more]
gi|571465124|ref|XP_003528823.2|4.1e-9370.70PREDICTED: reticulon-like protein B5 [Glycine max][more]
gi|823141406|ref|XP_012470522.1|9.1e-9372.05PREDICTED: reticulon-like protein B4 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01260.1Cp4.1LG08g01260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 65..222
score: 2.5
IPR003388ReticulonPROFILEPS50845RETICULONcoord: 64..251
score: 42
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 1..250
score: 2.0E
NoneNo IPR availablePANTHERPTHR10994:SF70RETICULON-LIKE PROTEIN B4coord: 1..250
score: 2.0E