Carg20863 (gene) Silver-seed gourd

Overview
NameCarg20863
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionReticulon-like protein
LocationCucurbita_argyrosperma_scaffold_141 : 9003 .. 11215 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCGAGTTGCTTGATTTTTCTTCTTCAGATCTTGGTCACTGCAATCGATCAATCATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACGTACGGAATCTCACCTCTCTGATTTGAACTCATTGAATAATTGTTTTGTTTTTTTCTATTACATTTCCTAAGTTTTACACTGCTTCTATTCGTTTTATTCGACCTTCGTCTTGATTGGTGTTTCTTAGGCTTCTTTTTGCTCTTTGGATTCGTTCTAGCTTGTTTCCCCATTCTTTGCTTGGATTTAGAATATATAAATAATTAGAAATTATAGATCTGCTTGCTTTACCTTACTGTGACTCATTGATAGTTCAGATCGAGTGTACGCTATAATTGAGTGATTCATTGAGCTTCCAGAGCAGAGTATTTATTATATTCATTGATAGTTCAGATCGAGCGTACGCTATAATAGAGTGATTCATTGAGCTTCCAGAACAGATTATTTATTATTTTCTTCCCCGAACTTGTTATATTTGTTCCTTGCCCCGGTTTCGATACTTCTACTTCATTTTTTTCTGCGTTGCACATTTCTGATTTCACATTTGAATATGTTCTGATGACGATACTTGTGTTGCTTATGTCGTATGGTAATTTATTTTTTGTTTGGCGGTTGGTAATGTTGATGACCGTTTCTGGCCCCTGTTGCATATGCAGCTGCTGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACGTTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAAGTGAGTTACTGAATCTCAACTTCCTTTTATCAATAATTAAGTTTCTAGCGACTTCAAATTATGCTCTTCTTTCCACTGTTTAACAAATGTAGTTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCTACCGGAAGAGATTTGAAGAAATTCATCACTGTACGTATCTGCTATTGATGCACTCTATTTGTCTTTTTATTGTGTGTATTTTACTTGTTGGGTTTATCTCAACTCTCAAGTAGCAACCGAGCCTGAACAAGTTGCAACTTAATATATATACCTTGATTGGACTACAGATTCGACCATAATACTCAATATGCTAATTTGTAGTCTCAGATATCGAAGTTAGAGTAATTGAATTTTATCTAGTTTATAGAAATGTTATGTCTCTGTATCAGGCAATTGCTGGGTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGTTGTTCTACATAAGTAACGACAACTCGAACTCTATCTTCATATTTATAGCCATCTTTTTATCATCCTTTGTTGATTCTGACGTTTGACAACAACTTTGAAAACGCAGACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTATGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAAACTGGGTCTGGTTGGGTGTCTTCTTCCCTCGCAAAAAAGCGGTAACCACATGCTTATTGATCTCTTTCTCGTTGTCTTTTGGCTGCACTCATCCATCATAGTATAGTTGTTGTTCAATCACAAGGGTGGTTTTCGCAATTTAGTGGGTTTGTTCTGCAAATGTTGAATTTGTAAGTTATGTTATTAGTTGTATGGGAACTTTCATGAGGGGAAGTACTTTGGTTTGTGGTTAGCTTTAGCTAATTTTATATACTTTTTTTTTCTCTCTTTCGTTCCAATTTGGGTGATGCCTTGAGGGAAAGAATTATTAAACTAATTTTAATAATATTCAAACTTTTGAATTGAAA

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCGAGTTGCTTGATTTTTCTTCTTCAGATCTTGGTCACTGCAATCGATCAATCATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACCTGCTGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACGTTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAATTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCTACCGGAAGAGATTTGAAGAAATTCATCACTGCAATTGCTGGGTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGTTGTTCTACATAAACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTATGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAAACTGGGTCTGGTTGGGTGTCTTCTTCCCTCGCAAAAAAGCGGTAACCACATGCTTATTGATCTCTTTCTCGTTGTCTTTTGGCTGCACTCATCCATCATAGTATAGTTGTTGTTCAATCACAAGGGTGGTTTTCGCAATTTAGTGGGTTTGTTCTGCAAATGTTGAATTTGTAAGTTATGTTATTAGTTGTATGGGAACTTTCATGAGGGGAAGTACTTTGGTTTGTGGTTAGCTTTAGCTAATTTTATATACTTTTTTTTTCTCTCTTTCGTTCCAATTTGGGTGATGCCTTGAGGGAAAGAATTATTAAACTAATTTTAATAATATTCAAACTTTTGAATTGAAA

Coding sequence (CDS)

ATGGCGGACCACTCTGACAACGTGGAGTCGAAATCGGAGTCATTGATCGACAAGATAGTCGAGAAGATTCATGATCATGATTCTTCTTCGTCCGGATCAGACTCTGAAACCGAGGGATCCTTGAAGGAGAAGGTCTTCCGCCTTTTTGGAAGGGAGAGGCCAGTTCATCATGTCTTCGGCGGTGGAAAACCTGCTGATTTATTCTTGTGGAGGAATAAGAAGATCTCAGCTGGTGTCCTTACTGGAGCCACTGTTATCTGGGTTTTCTTTGAACTGCTCGAGTGCCATCTGCTTACGTTTGTTTCTCGTTCTCTGATCCTCTCTCTTGGGCTCTTGTTTCTTTGGTCCAATGCCCACACATTTATCTACAATTACAGGAGTCCACCCCGAATCCCAGAAGTTCAACTTCCTGCGGACCCCTTCCTGGAGTTTGCTTCAACTTTGAGGGCGGAAATTAATTGTGGTTTTGCATTATTGCGGGACATTGCTACCGGAAGAGATTTGAAGAAATTCATCACTGCAATTGCTGGGTTGTGGGTCCTGTCGATCGTGGGAAGCTGGTGCAATTTCTTGACGTTGTTCTACATAAACTTTGTTTTGTTGCACACTGTTCCTGTTCTGTATGAGAAGTATGAAGATAAGATCGACCCATTAGCGGAAAAAGCATTAATTGAGTTCAAAAAGCACTACGCCGTGTTTGAAGAAAAGGTTTTGAGCAAGATCCCAAAAGGGCCATTGAAAGGTAAGAAGGCTTAA

Protein sequence

MADHSDNVESKSESLIDKIVEKIHDHDSSSSGSDSETEGSLKEKVFRLFGRERPVHHVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIPKGPLKGKKA
Homology
[Close]
BLAST of Carg20863 vs. NCBI nr
Match: XP_022933381.1 (reticulon-like protein B1 [Cucurbita moschata])

HSP 1 Score: 461.8 bits (1187), Expect = 1.4e-126
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60
           MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG
Sbjct: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60

Query: 61  GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT 120
           GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT
Sbjct: 61  GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT 120

Query: 121 FIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180
           FI  Y+SPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV
Sbjct: 121 FI--YKSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180

Query: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240
           LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK
Sbjct: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240

Query: 241 IPKGPLKGKKA 252
           IPKGPLKGKKA
Sbjct: 241 IPKGPLKGKKA 249

[Close]
BLAST of Carg20863 vs. NCBI nr
Match: XP_023540787.1 (reticulon-like protein B1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 459.5 bits (1181), Expect = 7.2e-126
Identity = 247/251 (98.41%), Postives = 248/251 (98.80%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60
           MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG
Sbjct: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60

Query: 61  GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT 120
           GGKPADL LWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT
Sbjct: 61  GGKPADLLLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT 120

Query: 121 FIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180
           FI  Y+SPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV
Sbjct: 121 FI--YKSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180

Query: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240
           LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK
Sbjct: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240

Query: 241 IPKGPLKGKKA 252
           IPKGPLKGKKA
Sbjct: 241 IPKGPLKGKKA 249

[Close]
BLAST of Carg20863 vs. NCBI nr
Match: XP_022974656.1 (reticulon-like protein B1 [Cucurbita maxima] >XP_022975040.1 reticulon-like protein B1 [Cucurbita maxima])

HSP 1 Score: 456.8 bits (1174), Expect = 4.6e-125
Identity = 245/251 (97.61%), Postives = 248/251 (98.80%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60
           MA+HSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG
Sbjct: 1   MAEHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFG 60

Query: 61  GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHT 120
           GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLF+WSNAHT
Sbjct: 61  GGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFVWSNAHT 120

Query: 121 FIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180
           FI  Y+SPPRIPEVQLPADPFLE ASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV
Sbjct: 121 FI--YKSPPRIPEVQLPADPFLELASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWV 180

Query: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240
           LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK
Sbjct: 181 LSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSK 240

Query: 241 IPKGPLKGKKA 252
           IPKGPLKGKKA
Sbjct: 241 IPKGPLKGKKA 249

[Close]
BLAST of Carg20863 vs. NCBI nr
Match: XP_022924602.1 (reticulon-like protein B5 [Cucurbita moschata])

HSP 1 Score: 426.0 bits (1094), Expect = 8.8e-116
Identity = 233/257 (90.66%), Postives = 239/257 (93.00%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHD------XXXXXXXXXXXXXGSLKEKVFRLFGRERP 60
           M+DHS+N E KSESLIDKIVEKIHD      XXXXXXXXXXXXX    EKVFRLFGRERP
Sbjct: 1   MSDHSENAEPKSESLIDKIVEKIHDXXXXXXXXXXXXXXXXXXXXXXXEKVFRLFGRERP 60

Query: 61  VHHVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHVFGGGKPADLFLWRNKKISAGVL+GATVIWVFFELLECHLLTFVSRSLIL+LGLLFL
Sbjct: 61  VHHVFGGGKPADLFLWRNKKISAGVLSGATVIWVFFELLECHLLTFVSRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI  Y+S PRIP VQLPADPFLEFASTLRAEINCG ALLRDIATGRDLKKFITA
Sbjct: 121 WSNAHTFI--YKSAPRIPVVQLPADPFLEFASTLRAEINCGIALLRDIATGRDLKKFITA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLLHTVPV+YEKYEDKIDPLAEKALIEFKKHYAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKALIEFKKHYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Carg20863 vs. NCBI nr
Match: XP_023528640.1 (reticulon-like protein B5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 424.1 bits (1089), Expect = 3.3e-115
Identity = 231/257 (89.88%), Postives = 238/257 (92.61%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHD------XXXXXXXXXXXXXGSLKEKVFRLFGRERP 60
           M+DHS+N E KSESLIDKIVEKIHD      XXXXXXXXXXXXX    EKVFRLFGRERP
Sbjct: 1   MSDHSENAEPKSESLIDKIVEKIHDXXXXXXXXXXXXXXXXXXXXXXXEKVFRLFGRERP 60

Query: 61  VHHVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHVFGGGKPADLFLWRNKKISAGVL+GAT+IWVFFELLECHLLTFVSRSLIL+LGLLFL
Sbjct: 61  VHHVFGGGKPADLFLWRNKKISAGVLSGATIIWVFFELLECHLLTFVSRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI  Y+S PRIP VQLPADPFLEFASTLRAEINCG ALLRDIATGRDLKKFITA
Sbjct: 121 WSNAHTFI--YKSAPRIPVVQLPADPFLEFASTLRAEINCGIALLRDIATGRDLKKFITA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLLHTVPV+YEKYEDKIDPLAEKALIEFKKHYAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKALIEFKKHYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGP KGKKA
Sbjct: 241 EKVLSKIPKGPFKGKKA 255

[Close]
BLAST of Carg20863 vs. TAIR10
Match: AT4G23630.1 (VIRB2-interacting protein 1)

HSP 1 Score: 282.0 bits (720), Expect = 3.7e-76
Identity = 163/252 (64.68%), Postives = 190/252 (75.40%), Query Frame = 0 

Query: 13  ESLIDKIVEKIH--------------DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHV 72
           ESL+DKI EKIH               XXXXXXXXXXXXX   K KV+RLFGRE+PVH V
Sbjct: 24  ESLMDKISEKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKVYRLFGREQPVHKV 83

Query: 73  FGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNA 132
            GGGKPAD+F+W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGL 192
             FI   +SPP+IPEV +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKF+ AIAGL
Sbjct: 144 TMFI--NKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGL 203

Query: 193 WVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL 251
           WVLSI+G   NFLTL YI  VLL TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVL
Sbjct: 204 WVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVL 263

[Close]
BLAST of Carg20863 vs. TAIR10
Match: AT4G11220.1 (VIRB2-interacting protein 2)

HSP 1 Score: 274.2 bits (700), Expect = 7.7e-74
Identity = 155/248 (62.50%), Postives = 190/248 (76.61%), Query Frame = 0 

Query: 13  ESLIDKIVEKIHDXXXXXXXXXXXXXG----------SLKEKVFRLFGRERPVHHVFGGG 72
           ESL++K+ EKIH XXXXXXXXXXXXX           SLK KV+RLFGRERPVH V GGG
Sbjct: 24  ESLMEKLSEKIHXXXXXXXXXXXXXXXXXXXXXXXXKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFI 132
           KPAD+F+W++KK+S GV  GATV WV FEL+E HLLT +   +I++L +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLS 192
             ++SPP+IPEV +P +P L+ AS LR EIN G + LR+IA+GRD+KKF++AIAGLWVLS
Sbjct: 144 --HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLS 203

Query: 193 IVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIP 251
           I+G   +FLTL YI  VLL TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP
Sbjct: 204 ILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 263

[Close]
BLAST of Carg20863 vs. TAIR10
Match: AT2G46170.1 (Reticulon family protein)

HSP 1 Score: 273.5 bits (698), Expect = 1.3e-73
Identity = 145/253 (57.31%), Postives = 184/253 (72.73%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIH----DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVH 60
           MA+  +      ESL++KI EKIH     XXXXX         ++K K++R+FGRE+PVH
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHXXXXXXXXXXEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query: 61  HVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
            V GGGKPAD+FLWR+KK+S  VL  AT IWV FEL+E HLL+ +    IL+LG LFLWS
Sbjct: 61  KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NAHT I   ++ P+IPE+ +P + FL  AS+LR E+N  F +LR IA GRDLKKF+  + 
Sbjct: 121 NAHTLI--NKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DPLAEKA+ E +K Y VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 240

Query: 241 VLSKIPKGPLKGK 250
           VLSKIP   LK K
Sbjct: 241 VLSKIPIASLKAK 251

[Close]
BLAST of Carg20863 vs. TAIR10
Match: AT5G41600.1 (VIRB2-interacting protein 3)

HSP 1 Score: 264.2 bits (674), Expect = 8.0e-71
Identity = 156/250 (62.40%), Postives = 180/250 (72.00%), Query Frame = 0 

Query: 13  ESLIDKIVEKIH--------DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFGGGKP 72
           ES+++KIVEKIH         XXXXXXXXXXXXX     K++RLFGRE+PVH V GGGKP
Sbjct: 9   ESILEKIVEKIHGXXXXXXXXXXXXXXXXXXXXXXXXXSKIYRLFGREKPVHKVLGGGKP 68

Query: 73  ADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYN 132
           AD+FLWRNKK+S GVL   T  WV FEL E HLL F+    I +L  LFLWSNA TFI  
Sbjct: 69  ADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFI-- 128

Query: 133 YRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIV 192
           ++S P IPEV +P DP L+  S LR EIN G  LLR+IA+G+D+KKFI  IAGLWVLSI+
Sbjct: 129 HKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSII 188

Query: 193 GSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL----SK 251
           GS  NFLTLFY   VLL T+PVLYEKYEDK+D   EKA+ E KK YAV +EKVL    SK
Sbjct: 189 GSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISK 248

[Close]
BLAST of Carg20863 vs. TAIR10
Match: AT1G64090.2 (Reticulan like protein B3)

HSP 1 Score: 251.1 bits (640), Expect = 7.0e-67
Identity = 154/256 (60.16%), Postives = 181/256 (70.70%), Query Frame = 0 

Query: 13  ESLIDKIVEKIH----DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFGGGK----- 72
           ES+++KI EKIH     XXXXXXXXXXXXX  LK K++RLFGRE+P+H +FGGGK     
Sbjct: 9   ESIMEKISEKIHGHXXXXXXXXXXXXXXXXXXLKTKIYRLFGREQPLHKLFGGGKHSENQ 68

Query: 73  -----------PADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLL 132
                       AD+FLWRNKK+S GVL  ATV W+ FELLE +LLT      IL+L +L
Sbjct: 69  DINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVL 128

Query: 133 FLWSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFI 192
           FLWS+A TFI  ++SP  IPEV +P D  L+ AS LR EIN GF +LRDIA+GRDLKKF+
Sbjct: 129 FLWSSASTFI--HKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFL 188

Query: 193 TAIAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAV 245
             IAGLWVLS VGS CNFLTL YI  VLL T+PVLYEKYEDK+D   EKA+ E KK Y  
Sbjct: 189 LVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVE 248

[Close]
BLAST of Carg20863 vs. Swiss-Prot
Match: sp|Q9SUR3|RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.7e-75
Identity = 163/252 (64.68%), Postives = 190/252 (75.40%), Query Frame = 0 

Query: 13  ESLIDKIVEKIH--------------DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHV 72
           ESL+DKI EKIH               XXXXXXXXXXXXX   K KV+RLFGRE+PVH V
Sbjct: 24  ESLMDKISEKIHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSKVYRLFGREQPVHKV 83

Query: 73  FGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNA 132
            GGGKPAD+F+W+NKK+S GVL GAT  WV FEL+E HLLT +   +I+ L +LFLWSNA
Sbjct: 84  LGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNA 143

Query: 133 HTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGL 192
             FI   +SPP+IPEV +P +P L+ AS LR EIN GF+ LR+IA+GRDLKKF+ AIAGL
Sbjct: 144 TMFI--NKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGL 203

Query: 193 WVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL 251
           WVLSI+G   NFLTL YI  VLL TVP+ Y+KYEDK+DPL EKA+IE KK YAV +EKVL
Sbjct: 204 WVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVL 263

[Close]
BLAST of Carg20863 vs. Swiss-Prot
Match: sp|Q9SUT9|RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.4e-72
Identity = 155/248 (62.50%), Postives = 190/248 (76.61%), Query Frame = 0 

Query: 13  ESLIDKIVEKIHDXXXXXXXXXXXXXG----------SLKEKVFRLFGRERPVHHVFGGG 72
           ESL++K+ EKIH XXXXXXXXXXXXX           SLK KV+RLFGRERPVH V GGG
Sbjct: 24  ESLMEKLSEKIHXXXXXXXXXXXXXXXXXXXXXXXXKSLKSKVYRLFGRERPVHKVLGGG 83

Query: 73  KPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFI 132
           KPAD+F+W++KK+S GV  GATV WV FEL+E HLLT +   +I++L +LFLWSNA  FI
Sbjct: 84  KPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFI 143

Query: 133 YNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLS 192
             ++SPP+IPEV +P +P L+ AS LR EIN G + LR+IA+GRD+KKF++AIAGLWVLS
Sbjct: 144 --HKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLS 203

Query: 193 IVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVLSKIP 251
           I+G   +FLTL YI  VLL TVP+ Y+KYEDK+D   EKA+ E KK YAV + KV SKIP
Sbjct: 204 ILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSKIP 263

[Close]
BLAST of Carg20863 vs. Swiss-Prot
Match: sp|O82352|RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.4e-72
Identity = 145/253 (57.31%), Postives = 184/253 (72.73%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIH----DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVH 60
           MA+  +      ESL++KI EKIH     XXXXX         ++K K++R+FGRE+PVH
Sbjct: 1   MAEEIEKSVPTEESLMEKISEKIHXXXXXXXXXXEYEKPDSPSAVKAKIYRMFGREKPVH 60

Query: 61  HVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
            V GGGKPAD+FLWR+KK+S  VL  AT IWV FEL+E HLL+ +    IL+LG LFLWS
Sbjct: 61  KVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NAHT I   ++ P+IPE+ +P + FL  AS+LR E+N  F +LR IA GRDLKKF+  + 
Sbjct: 121 NAHTLI--NKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVV 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DPLAEKA+ E +K Y VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEK 240

Query: 241 VLSKIPKGPLKGK 250
           VLSKIP   LK K
Sbjct: 241 VLSKIPIASLKAK 251

[Close]
BLAST of Carg20863 vs. Swiss-Prot
Match: sp|Q6DBN4|RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 6.9e-72
Identity = 150/253 (59.29%), Postives = 187/253 (73.91%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHD----XXXXXXXXXXXXXGSLKEKVFRLFGRERPVH 60
           MA+  +    K ESL++KI +KIHD    XXXXXXXXXXX   +LK K++RLFGRE+PVH
Sbjct: 1   MAEELEKSMHKEESLMEKIADKIHDXXXXXXXXXXXXXXXSPSALKAKIYRLFGREKPVH 60

Query: 61  HVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
            V GGG PAD+FLWR+KK+SA VL  AT IWV FEL+E H L+ V   LI +L  LFL S
Sbjct: 61  KVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NAH F+   ++PP+IPE+ +  + FL   S LR E+N  F +LR IA GRDLKKF+  + 
Sbjct: 121 NAHAFM--NKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVF 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLW++S+VG+W NFLTL YI FV+LHTVP+LYEK+EDK+DP+AEK L E KKHY VF+EK
Sbjct: 181 GLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEK 240

Query: 241 VLSKIPKGPLKGK 250
           VLSK+P   LK K
Sbjct: 241 VLSKLPVASLKAK 251

[Close]
BLAST of Carg20863 vs. Swiss-Prot
Match: sp|Q9SH59|RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.1e-69
Identity = 155/240 (64.58%), Postives = 182/240 (75.83%), Query Frame = 0 

Query: 13  ESLIDKIVEKIH----DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHVFGGGKPADLF 72
           ES+++KI EKIH     XXXXXXXXXXXXX  LK K++RLFGRE+P+H +FGGGKPAD+F
Sbjct: 9   ESIMEKISEKIHGHXXXXXXXXXXXXXXXXXXLKTKIYRLFGREQPLHKLFGGGKPADIF 68

Query: 73  LWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNAHTFIYNYRSP 132
           LWRNKK+S GVL  ATV W+ FELLE +LLT      IL+L +LFLWS+A TFI  ++SP
Sbjct: 69  LWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFI--HKSP 128

Query: 133 PRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGLWVLSIVGSWC 192
             IPEV +P D  L+ AS LR EIN GF +LRDIA+GRDLKKF+  IAGLWVLS VGS C
Sbjct: 129 LHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSC 188

Query: 193 NFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE----EKVLSKIPKG 245
           NFLTL YI  VLL T+PVLYEKYEDK+D   EKA+ E KK Y  F+     KV+SKIPKG
Sbjct: 189 NFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 246

[Close]
BLAST of Carg20863 vs. TrEMBL
Match: tr|A0A1S3AVW2|A0A1S3AVW2_CUCME (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103483236 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.9e-115
Identity = 228/257 (88.72%), Postives = 241/257 (93.77%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHD------XXXXXXXXXXXXXGSLKEKVFRLFGRERP 60
           M+DH++N E KSESLIDKIVEKIHD      XXXXXXXXXXXXX  LKEKVFR+FGRERP
Sbjct: 1   MSDHAENTEPKSESLIDKIVEKIHDXXXXXXXXXXXXXXXXXXXXXLKEKVFRIFGRERP 60

Query: 61  VHHVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHV GGGKPADLFLWRNKKISAGVL+GAT+IWVFFELLECHLLTF+SRSLIL+LGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI  Y+SPPRIP VQLPADPF+EFASTLRAEINCGFALLRDIATGRDLKKF+TA
Sbjct: 121 WSNAHTFI--YKSPPRIPVVQLPADPFMEFASTLRAEINCGFALLRDIATGRDLKKFLTA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLLHTVPV+YEKYEDKIDPLAEKA+IEFKK YAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLHTVPVVYEKYEDKIDPLAEKAVIEFKKLYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Carg20863 vs. TrEMBL
Match: tr|A0A0A0L627|A0A0A0L627_CUCSA (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G121020 PE=4 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 1.4e-114
Identity = 227/257 (88.33%), Postives = 240/257 (93.39%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHD------XXXXXXXXXXXXXGSLKEKVFRLFGRERP 60
           M+DH++  E KSESLIDKIVEKIHD      XXXXXXXXXXXXX  LKEKVFR+FGRERP
Sbjct: 1   MSDHAETAEPKSESLIDKIVEKIHDXXXXXXXXXXXXXXXXXXXXXLKEKVFRIFGRERP 60

Query: 61  VHHVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFL 120
           VHHV GGGKPADLFLWRNKKISAGVL+GAT+IWVFFELLECHLLTF+SRSLIL+LGLLFL
Sbjct: 61  VHHVLGGGKPADLFLWRNKKISAGVLSGATLIWVFFELLECHLLTFISRSLILALGLLFL 120

Query: 121 WSNAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITA 180
           WSNAHTFI  Y+SPPRIP VQLPADPFLEFAS LRAEINCGFALLRDIATGRDLKKF+TA
Sbjct: 121 WSNAHTFI--YKSPPRIPVVQLPADPFLEFASALRAEINCGFALLRDIATGRDLKKFLTA 180

Query: 181 IAGLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFE 240
           IA LWVLSIVGSWCNFLTLFYINFVLL+TVPV+YEKYEDKIDPLAEKA+IEFKKHYAVFE
Sbjct: 181 IAALWVLSIVGSWCNFLTLFYINFVLLYTVPVVYEKYEDKIDPLAEKAVIEFKKHYAVFE 240

Query: 241 EKVLSKIPKGPLKGKKA 252
           EKVLSKIPKGPLKGKKA
Sbjct: 241 EKVLSKIPKGPLKGKKA 255

[Close]
BLAST of Carg20863 vs. TrEMBL
Match: tr|A0A2I4FWU3|A0A2I4FWU3_9ROSI (Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC109002713 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89
Identity = 187/254 (73.62%), Postives = 212/254 (83.46%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIHDXXXXXXXXXXXXXG---SLKEKVFRLFGRERPVHH 60
           MA+HS++  S  ES+I+KI EKIH+XXXXXXXXXXXXX    S+K K++R+FGRE+PVH 
Sbjct: 1   MAEHSESAGSAVESMIEKISEKIHEXXXXXXXXXXXXXVSPLSVKAKIYRIFGREKPVHM 60

Query: 61  VFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSN 120
           V GGGKPAD+FLWRNKKISA VL GAT IWVFFELLE HLLT V   LIL+L +LFLWSN
Sbjct: 61  VLGGGKPADVFLWRNKKISASVLGGATAIWVFFELLEYHLLTLVCHVLILALAILFLWSN 120

Query: 121 AHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAG 180
           AHTFI   ++PPRIPEV LP +PFL+ A+ LR EIN GF +LRDI TGRDLKKF+  IAG
Sbjct: 121 AHTFI--NKTPPRIPEVHLPEEPFLQVAAALRIEINRGFVVLRDIMTGRDLKKFLIVIAG 180

Query: 181 LWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKV 240
            WVLSIVGSWCNFLTLFYI+FVLLHTVPVLYEKYEDK+DP AEKA+IE KK YAVF+ KV
Sbjct: 181 FWVLSIVGSWCNFLTLFYISFVLLHTVPVLYEKYEDKVDPFAEKAMIEIKKQYAVFDAKV 240

Query: 241 LSKIPKGPLKGKKA 252
           LSKI KG LKGK A
Sbjct: 241 LSKIRKGSLKGKLA 252

[Close]
BLAST of Carg20863 vs. TrEMBL
Match: tr|A0A2I4GMH0|A0A2I4GMH0_9ROSI (Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC109009168 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88
Identity = 188/255 (73.73%), Postives = 209/255 (81.96%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKIH----DXXXXXXXXXXXXXGSLKEKVFRLFGRERPVH 60
           MAD S++  S  ES+ +KI EKIH     XXXXXXXXXXXXX     KVFRLFGRE+PVH
Sbjct: 1   MADQSESAGSTVESVTEKISEKIHAXXXXXXXXXXXXXXXXXXXXXXKVFRLFGREKPVH 60

Query: 61  HVFGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWS 120
            VFGGGKPAD+FLWRNKKIS GVL GAT IWVFFELLE HLLT V   LIL+L +LFLWS
Sbjct: 61  QVFGGGKPADVFLWRNKKISGGVLGGATAIWVFFELLEYHLLTLVCHILILALAILFLWS 120

Query: 121 NAHTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIA 180
           NA+TFI   ++PPRIPEV LP +PFL+ A+ LR EIN  FA+LRDI TGRDLKKF+  IA
Sbjct: 121 NAYTFI--KKTPPRIPEVHLPEEPFLQVAAALRIEINHTFAVLRDIVTGRDLKKFLIVIA 180

Query: 181 GLWVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEK 240
           GLWV+SIVGSWCNFLTLFYI+FVLLHTVPVLYEK+EDK+DP AEKA IE KK YAVF+ K
Sbjct: 181 GLWVISIVGSWCNFLTLFYISFVLLHTVPVLYEKHEDKVDPFAEKATIEIKKQYAVFDAK 240

Query: 241 VLSKIPKGPLKGKKA 252
           VLSKIPKGPLKGK A
Sbjct: 241 VLSKIPKGPLKGKLA 253

[Close]
BLAST of Carg20863 vs. TrEMBL
Match: tr|A0A2P5X0W6|A0A2P5X0W6_GOSBA (Reticulon-like protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23696 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.3e-88
Identity = 178/252 (70.63%), Postives = 203/252 (80.56%), Query Frame = 0 

Query: 1   MADHSDNVESKSESLIDKIVEKI--HDXXXXXXXXXXXXXGSLKEKVFRLFGRERPVHHV 60
           MA+H +  +   ESL+++I EKI  HD    XXXXX     S+K KVFRLFGRE+PVHHV
Sbjct: 1   MAEHEE--KKHEESLMERIAEKIQGHDSSSSXXXXXKPSESSIKAKVFRLFGREKPVHHV 60

Query: 61  FGGGKPADLFLWRNKKISAGVLTGATVIWVFFELLECHLLTFVSRSLILSLGLLFLWSNA 120
            GGGKPAD+FLWRNKKISAG L  ATVIW+ FE+LE HLLT V   LIL+L +LFLWSNA
Sbjct: 61  LGGGKPADIFLWRNKKISAGALGVATVIWILFEMLEYHLLTLVCHLLILALAVLFLWSNA 120

Query: 121 HTFIYNYRSPPRIPEVQLPADPFLEFASTLRAEINCGFALLRDIATGRDLKKFITAIAGL 180
            TFI   +SPPRIPEVQ+P DP +EFA  LR EIN  FA+LRDIA+GR+LKKF++ IAGL
Sbjct: 121 ATFI--NKSPPRIPEVQIPKDPVMEFAQALRFEINRAFAVLRDIASGRELKKFLSVIAGL 180

Query: 181 WVLSIVGSWCNFLTLFYINFVLLHTVPVLYEKYEDKIDPLAEKALIEFKKHYAVFEEKVL 240
           WVLSIVGSWCNFLTLFYI FVLLHTVPVLYEKYEDK+DP AEKA+ E KK YAVF+ KVL
Sbjct: 181 WVLSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDKVDPFAEKAMHEIKKQYAVFDAKVL 240

Query: 241 SKIPKGPLKGKK 251
           SKIP+GPLK KK
Sbjct: 241 SKIPRGPLKEKK 248

The following BLAST results are available for this feature:
BLAST of Carg20863 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022933381.11.4e-12698.80reticulon-like protein B1 [Cucurbita moschata][more]
XP_023540787.17.2e-12698.41reticulon-like protein B1 [Cucurbita pepo subsp. pepo][more]
XP_022974656.14.6e-12597.61reticulon-like protein B1 [Cucurbita maxima] >XP_022975040.1 reticulon-like prot... [more]
XP_022924602.18.8e-11690.66reticulon-like protein B5 [Cucurbita moschata][more]
XP_023528640.13.3e-11589.88reticulon-like protein B5 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg20863 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23630.13.7e-7664.68VIRB2-interacting protein 1[more]
AT4G11220.17.7e-7462.50VIRB2-interacting protein 2[more]
AT2G46170.11.3e-7357.31Reticulon family protein[more]
AT5G41600.18.0e-7162.40VIRB2-interacting protein 3[more]
AT1G64090.27.0e-6760.16Reticulan like protein B3[more]
BLAST of Carg20863 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SUR3|RTNLA_ARATH6.7e-7564.68Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1[more]
sp|Q9SUT9|RTNLB_ARATH1.4e-7262.50Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1[more]
sp|O82352|RTNLE_ARATH2.4e-7257.31Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1[more]
sp|Q6DBN4|RTNLF_ARATH6.9e-7259.29Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1[more]
sp|Q9SH59|RTNLC_ARATH1.1e-6964.58Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1[more]
BLAST of Carg20863 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVW2|A0A1S3AVW2_CUCME4.9e-11588.72Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103483236 PE=4 SV=1[more]
tr|A0A0A0L627|A0A0A0L627_CUCSA1.4e-11488.33Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G121020 PE=4 SV=1[more]
tr|A0A2I4FWU3|A0A2I4FWU3_9ROSI1.6e-8973.62Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC109002713 PE=4 SV=1[more]
tr|A0A2I4GMH0|A0A2I4GMH0_9ROSI1.0e-8873.73Reticulon-like protein OS=Juglans regia OX=51240 GN=LOC109009168 PE=4 SV=1[more]
tr|A0A2P5X0W6|A0A2P5X0W6_GOSBA1.3e-8870.63Reticulon-like protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23696 PE=4 SV=... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003388Reticulon
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20863-RACarg20863-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003388ReticulonPFAMPF02453Reticuloncoord: 65..222
e-value: 6.4E-52
score: 175.5
IPR003388ReticulonPROSITEPS50845RETICULONcoord: 64..251
score: 41.948
NoneNo IPR availablePANTHERPTHR10994:SF70RETICULON-LIKE PROTEIN B1-RELATEDcoord: 1..250
NoneNo IPR availablePANTHERPTHR10994RETICULONcoord: 1..250