Cp4.1LG08g01250 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01250
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING-H2 finger protein ATL68
LocationCp4.1LG08 : 3676698 .. 3677270 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCTCTTCCACCGCTTCTTCCTCCAATTACTCCTTCGCTAAGCTTGGTTTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTCTCCGCTCTCCTTCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCTTCGCGCTCCGATGCCGGAATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGCCTCGATCAGGCTGTGATAAACTCTTACCCTAAATTCCCCTTCTCCAAGGACAAATCCATGGCCGGGGCTAATTGCGTTTGTTCTATTTGCCTATGTGAGTATAAGGAGGCGGAGATGCTGAGGATGATGCCTGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCGCTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGA

mRNA sequence

ATGTCCTCCTCTTCCACCGCTTCTTCCTCCAATTACTCCTTCGCTAAGCTTGGTTTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTCTCCGCTCTCCTTCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCTTCGCGCTCCGATGCCGGAATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGCCTCGATCAGGCTGTGATAAACTCTTACCCTAAATTCCCCTTCTCCAAGGACAAATCCATGGCCGGGGCTAATTGCGTTTGTTCTATTTGCCTATGTGAGTATAAGGAGGCGGAGATGCTGAGGATGATGCCTGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCGCTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGA

Coding sequence (CDS)

ATGTCCTCCTCTTCCACCGCTTCTTCCTCCAATTACTCCTTCGCTAAGCTTGGTTTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTCTCCGCTCTCCTTCTCGCCTTCTACGTCTGCTGCCGCGCCTCCCGCTCCCGCAACCTCCGTCTCTCTTCTTCCAGGCCGCCTCCTTCGCGCTCCGATGCCGGAATCATTCTCCCGCAAATCATTTTTGTCGCCGAGGACGACGGCGCTCCAGATCGCGACGATGACAACGGCGTCGTTGGCCTCGATCAGGCTGTGATAAACTCTTACCCTAAATTCCCCTTCTCCAAGGACAAATCCATGGCCGGGGCTAATTGCGTTTGTTCTATTTGCCTATGTGAGTATAAGGAGGCGGAGATGCTGAGGATGATGCCTGAGTGTAGACATTACTTTCATCTCTGTTGCATCGACGCTTGGTTGAAGCTTAATGGCTCTTGCCCGGTTTGCCGGAATTCGCCGCTCCCGACGCCGCTTTCCACTCCTCTGCAGGAGGTTGTGCCGCTCTCACAATACATGGCGGATCGGAGAAGGAGATGA

Protein sequence

MSSSSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR
Homology
[Close]
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-60
Identity = 128/197 (64.97%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 5   STASSSNYSF-AKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSR 64
           S   + N+S+   LGFGY+IAIAL FLVLLS +LL+ Y+CCR SR R   + S+      
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVEST----GD 79

Query: 65  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMA-------GA 124
               +ILP+IIFVAE+D   D +  + VVGLDQAVINSYPKF FSKD S A       G 
Sbjct: 80  RGGSVILPRIIFVAEEDNE-DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGG 139

Query: 125 NCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLP----TPLST 184
           +  CSICLCEYKEAEMLRMMPEC+HYFHLCC+DAWLKLNGSCPVCRNSPLP    TPLST
Sbjct: 140 DTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLST 199

Query: 185 PLQEVVPLSQYMADRRR 190
           PL EVVPLSQY ADRRR
Sbjct: 200 PLSEVVPLSQYAADRRR 211

[Close]
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-55
Identity = 117/189 (61.90%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 17  LGFGYAIAIALAFLVLLSALLLAFYVCCRASRSR-NLRLSSSRPPPSRSDAGIILPQIIF 76
           LG GY+IAIAL FLVL+S ++L+ Y+CCRASR R +   +++    S SD G+I+P+IIF
Sbjct: 24  LGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIF 83

Query: 77  VAEDDGAPDRDDDNGVVG-LDQAVINSYPKFPFSKDKSMA----------GANCVCSICL 136
           VAEDD   D +  N VVG LD +VINSYPKF F+KD +            G    CSICL
Sbjct: 84  VAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICL 143

Query: 137 CEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLP----TPLSTPLQEVVPL 190
           CEY E EMLRMMPEC+HYFH+ C+DAWLKLNGSCPVCRNSPLP    TP STPL EVVPL
Sbjct: 144 CEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPL 203

[Close]
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.2e-29
Identity = 76/171 (44.44%), Postives = 99/171 (57.89%), Query Frame = 1 

Query: 18  GFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFVA 77
           GF Y I +++  L+L++ + L  Y C R       +LSSS P  +  D+  I      V 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRN------QLSSS-PSQTNQDSTRIHHHHHHVI 122

Query: 78  EDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLCEYKEAEMLRMMP 137
            D           V GLD+  I SYPK  +S+ K    A+C C+ICL +YK   +LR +P
Sbjct: 123 IDV----------VPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLP 182

Query: 138 ECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 189
           +C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1 

Query: 17  LGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFV 76
           +G GY IAIA++ LVL+S ++LA Y+C R+         S+    + SD  + LP     
Sbjct: 11  VGLGYGIAIAVSILVLISFIMLASYICIRSK--------STGRDEATSDVVLDLPSPAAE 70

Query: 77  AEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANC-VCSICLCEYKEAEMLRM 136
            +             +GLD+ VI SYP+      + +   N   CSICLC+Y+  E +R 
Sbjct: 71  VK-------------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRC 130

Query: 137 MPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 182
           +PEC H FH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 131 IPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.2e-25
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 1 

Query: 18  GFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILP-QIIFV 77
           G  Y I +++  L+L++ + L  Y C R+  S +   +       R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDGAPDRDDDNGVV---GLDQAVINSYPKFPF-------SKDKSMAGANCVCSICLCE 137
            EDD     + D  VV   GL + VI  +PK P+       S  K  +  +C CSICL +
Sbjct: 82  FEDD-----ESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLAD 141

Query: 138 YKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 183
           YK+ +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

[Close]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match: A0A0A0L7B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121045 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.2e-89
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 1 

Query: 6   TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SR 65
           ++ SS YSF+++G GY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SR
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSR 61

Query: 66  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 125
           SDAGIILPQIIFVAEDD APDRDDDNGVVGLDQ VINSYPKFPFS+DKSMAGANCVCSIC
Sbjct: 62  SDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSIC 121

Query: 126 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 185
           LCEYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY
Sbjct: 122 LCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 181

Query: 186 MADRRRR 191
           MADRRRR
Sbjct: 182 MADRRRR 184

[Close]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match: A0A067K9Q7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14325 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 4.0e-63
Identity = 128/194 (65.98%), Postives = 150/194 (77.32%), Query Frame = 1 

Query: 3   SSSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPS 62
           +++TA +S      LG GY+IAIAL FLVLLS +LLA Y+CCRASR+R+   + +    +
Sbjct: 16  TTTTAPTSPNYITNLGLGYSIAIALGFLVLLSTVLLASYMCCRASRNRSFNSNDNDNNGN 75

Query: 63  RSDA------GIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGA 122
            +D       GI+LP+IIFVAED+   +RD +   VGLDQAVINSYPKF F+KD S  G 
Sbjct: 76  DNDNSNSVPDGILLPRIIFVAEDEDDQERDLETSAVGLDQAVINSYPKFQFTKDGSSNGN 135

Query: 123 NCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 182
           +  CSICLCEYK+ EMLRMMPECRH+FHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPL E
Sbjct: 136 STTCSICLCEYKDLEMLRMMPECRHFFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLSE 195

Query: 183 VVPLSQYMADRRRR 191
           VVPLSQY ADRRRR
Sbjct: 196 VVPLSQYAADRRRR 209

[Close]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match: A0A067H3A6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029203mg PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 134/198 (67.68%), Postives = 151/198 (76.26%), Query Frame = 1 

Query: 3   SSSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRS-RNLRLSSSRPPP 62
           S+    S NY    +G GY+IAIAL FLVLLS +LLA Y+CCR + S  N   +      
Sbjct: 2   STPATPSPNY-LTNIGLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNN 61

Query: 63  SRSDAGIILPQIIFVAEDDGAPD---RDDDNGVVGLDQAVINSYPKFPFSKDKSMAG--- 122
           S S+ GIILP+IIFVAEDDG  +   +DDDN VVGLDQAVINSYPKF F+K+ S++G   
Sbjct: 62  SVSNDGIILPRIIFVAEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKE-SVSGNNN 121

Query: 123 ---ANCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLST 182
               N  CSICLCEYK+ EMLRMMPECRHYFHLCC+DAWLKLNGSCPVCRNSPLPTPLST
Sbjct: 122 SNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLST 181

Query: 183 PLQEVVPLSQYMADRRRR 191
           PLQEVVPLSQY ADRRRR
Sbjct: 182 PLQEVVPLSQYAADRRRR 197

[Close]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match: K7MUE9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 8.3e-61
Identity = 125/182 (68.68%), Postives = 145/182 (79.67%), Query Frame = 1 

Query: 10  SNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGII 69
           S+  F  LG GY+IAIALAFL LLS LLL+ Y+CCR +R R+ + ++S    + SD GI+
Sbjct: 2   SSDHFPHLGLGYSIAIALAFLFLLSTLLLSSYLCCRHNRRRHTQTTASA---AASDGGIV 61

Query: 70  LPQIIFVAEDDGAPDRDDDNG-VVGLDQAVINSYPKFPFSKDKSMAGA-NCVCSICLCEY 129
           LP++IFVAEDD   D D D   VVGLDQ+VINSYP+F F+KD       N  CSICLCEY
Sbjct: 62  LPRVIFVAEDD---DEDADACMVVGLDQSVINSYPRFQFNKDSDARNIINTTCSICLCEY 121

Query: 130 KEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADR 189
           K++EMLRMMPECRHYFHLCC+D+WLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY ADR
Sbjct: 122 KDSEMLRMMPECRHYFHLCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADR 177

[Close]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match: A0A151RYI3_CAJCA (RING-H2 finger protein ATL3K OS=Cajanus cajan GN=KK1_030715 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.1e-60
Identity = 115/176 (65.34%), Postives = 140/176 (79.55%), Query Frame = 1 

Query: 14  FAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQI 73
           F+ LG GY+IAIALAFL LLS LLL+ Y+CCRA R+R    + +      +D G+ILP++
Sbjct: 10  FSNLGLGYSIAIALAFLFLLSTLLLSSYLCCRARRNRTRAAAQAASRARSADGGVILPRV 69

Query: 74  IFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLCEYKEAEML 133
           IFVAED+   D ++++  VGL+Q+VINSYP+F FS  +     N  CSICLCEYK++EML
Sbjct: 70  IFVAEDE---DEEEESAAVGLEQSVINSYPRFEFSNREGARSNNTTCSICLCEYKDSEML 129

Query: 134 RMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRR 190
           RMMPECRH+FH CC+D+WLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY ADRRR
Sbjct: 130 RMMPECRHFFHQCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYAADRRR 182

[Close]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match: AT2G46160.1 (AT2G46160.1 RING/U-box superfamily protein)

HSP 1 Score: 234.2 bits (596), Expect = 6.7e-62
Identity = 128/197 (64.97%), Postives = 145/197 (73.60%), Query Frame = 1 

Query: 5   STASSSNYSF-AKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSR 64
           S   + N+S+   LGFGY+IAIAL FLVLLS +LL+ Y+CCR SR R   + S+      
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVEST----GD 79

Query: 65  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMA-------GA 124
               +ILP+IIFVAE+D   D +  + VVGLDQAVINSYPKF FSKD S A       G 
Sbjct: 80  RGGSVILPRIIFVAEEDNE-DLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGGG 139

Query: 125 NCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLP----TPLST 184
           +  CSICLCEYKEAEMLRMMPEC+HYFHLCC+DAWLKLNGSCPVCRNSPLP    TPLST
Sbjct: 140 DTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLST 199

Query: 185 PLQEVVPLSQYMADRRR 190
           PL EVVPLSQY ADRRR
Sbjct: 200 PLSEVVPLSQYAADRRR 211

[Close]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match: AT3G61550.1 (AT3G61550.1 RING/U-box superfamily protein)

HSP 1 Score: 215.3 bits (547), Expect = 3.2e-56
Identity = 117/189 (61.90%), Postives = 137/189 (72.49%), Query Frame = 1 

Query: 17  LGFGYAIAIALAFLVLLSALLLAFYVCCRASRSR-NLRLSSSRPPPSRSDAGIILPQIIF 76
           LG GY+IAIAL FLVL+S ++L+ Y+CCRASR R +   +++    S SD G+I+P+IIF
Sbjct: 24  LGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIF 83

Query: 77  VAEDDGAPDRDDDNGVVG-LDQAVINSYPKFPFSKDKSMA----------GANCVCSICL 136
           VAEDD   D +  N VVG LD +VINSYPKF F+KD +            G    CSICL
Sbjct: 84  VAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICL 143

Query: 137 CEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLP----TPLSTPLQEVVPL 190
           CEY E EMLRMMPEC+HYFH+ C+DAWLKLNGSCPVCRNSPLP    TP STPL EVVPL
Sbjct: 144 CEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPL 203

[Close]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match: AT2G35910.1 (AT2G35910.1 RING/U-box superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 5.2e-30
Identity = 76/171 (44.44%), Postives = 99/171 (57.89%), Query Frame = 1 

Query: 18  GFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFVA 77
           GF Y I +++  L+L++ + L  Y C R       +LSSS P  +  D+  I      V 
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRN------QLSSS-PSQTNQDSTRIHHHHHHVI 122

Query: 78  EDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLCEYKEAEMLRMMP 137
            D           V GLD+  I SYPK  +S+ K    A+C C+ICL +YK   +LR +P
Sbjct: 123 IDV----------VPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLP 182

Query: 138 ECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 189
           +C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 DCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 117.9 bits (294), Expect = 7.0e-27
Identity = 64/166 (38.55%), Postives = 95/166 (57.23%), Query Frame = 1 

Query: 17  LGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILPQIIFV 76
           +G GY IAIA++ LVL+S ++LA Y+C R+         S+    + SD  + LP     
Sbjct: 11  VGLGYGIAIAVSILVLISFIMLASYICIRSK--------STGRDEATSDVVLDLPSPAAE 70

Query: 77  AEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANC-VCSICLCEYKEAEMLRM 136
            +             +GLD+ VI SYP+      + +   N   CSICLC+Y+  E +R 
Sbjct: 71  VK-------------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVRC 130

Query: 137 MPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLS 182
           +PEC H FH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 131 IPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match: AT5G06490.1 (AT5G06490.1 RING/U-box superfamily protein)

HSP 1 Score: 115.5 bits (288), Expect = 3.5e-26
Identity = 66/176 (37.50%), Postives = 98/176 (55.68%), Query Frame = 1 

Query: 18  GFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSDAGIILP-QIIFV 77
           G  Y I +++  L+L++ + L  Y C R+  S +   +       R   G + P Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDGAPDRDDDNGVV---GLDQAVINSYPKFPF-------SKDKSMAGANCVCSICLCE 137
            EDD     + D  VV   GL + VI  +PK P+       S  K  +  +C CSICL +
Sbjct: 82  FEDD-----ESDTVVVEVLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLAD 141

Query: 138 YKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 183
           YK+ +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 YKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

[Close]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match: gi|449432106|ref|XP_004133841.1| (PREDICTED: RING-H2 finger protein ATL67 [Cucumis sativus])

HSP 1 Score: 335.5 bits (859), Expect = 6.1e-89
Identity = 167/187 (89.30%), Postives = 176/187 (94.12%), Query Frame = 1 

Query: 6   TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPP--SR 65
           ++ SS YSF+++G GY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR    RPPP  SR
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLR----RPPPPSSR 61

Query: 66  SDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSIC 125
           SDAGIILPQIIFVAEDD APDRDDDNGVVGLDQ VINSYPKFPFS+DKSMAGANCVCSIC
Sbjct: 62  SDAGIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSIC 121

Query: 126 LCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 185
           LCEYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY
Sbjct: 122 LCEYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQY 181

Query: 186 MADRRRR 191
           MADRRRR
Sbjct: 182 MADRRRR 184

[Close]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match: gi|659075129|ref|XP_008437981.1| (PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo])

HSP 1 Score: 335.1 bits (858), Expect = 7.9e-89
Identity = 164/185 (88.65%), Postives = 175/185 (94.59%), Query Frame = 1 

Query: 6   TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPSRSD 65
           ++ SS YSF+++G GY+IAIALAFLVLLSALLLAFYVCCRASRSR+LR     PPPSRS+
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSRHLRRPP--PPPSRSE 61

Query: 66  AGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSICLC 125
            GIILPQIIFVAEDD APDRDDDNGVVGLDQ+VINSYPKFPFS+DKSMAGANCVCSICLC
Sbjct: 62  TGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLC 121

Query: 126 EYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 185
           EYK+AEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA
Sbjct: 122 EYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 181

Query: 186 DRRRR 191
           DRRRR
Sbjct: 182 DRRRR 184

[Close]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match: gi|1009142685|ref|XP_015888853.1| (PREDICTED: RING-H2 finger protein ATL68-like [Ziziphus jujuba])

HSP 1 Score: 254.6 bits (649), Expect = 1.4e-64
Identity = 136/188 (72.34%), Postives = 151/188 (80.32%), Query Frame = 1 

Query: 6   TASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRN---LRLSSSRPPPS 65
           T +S  Y    LG GY+IAIAL FLVLLS LLLA Y+CCRASR R+      ++S P P+
Sbjct: 14  TPNSPTY-LTNLGLGYSIAIALGFLVLLSTLLLASYICCRASRHRSPPSQTNNTSDPNPA 73

Query: 66  RSDAGIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGANCVCSI 125
            SD GI+LP+IIFVAEDD   D DDD+ VVGLDQ+VINSYPKFP+SKD  +      CSI
Sbjct: 74  PSD-GIMLPRIIFVAEDDDQRD-DDDSAVVGLDQSVINSYPKFPWSKD--LDNKESTCSI 133

Query: 126 CLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 185
           CLCEYK+ EMLRMMPECRHYFHLCC+DAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ
Sbjct: 134 CLCEYKDFEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 193

Query: 186 YMADRRRR 191
           Y ADRRRR
Sbjct: 194 YAADRRRR 196

[Close]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match: gi|802694899|ref|XP_012083296.1| (PREDICTED: RING-H2 finger protein ATL67 [Jatropha curcas])

HSP 1 Score: 249.2 bits (635), Expect = 5.7e-63
Identity = 128/194 (65.98%), Postives = 150/194 (77.32%), Query Frame = 1 

Query: 3   SSSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRSRNLRLSSSRPPPS 62
           +++TA +S      LG GY+IAIAL FLVLLS +LLA Y+CCRASR+R+   + +    +
Sbjct: 16  TTTTAPTSPNYITNLGLGYSIAIALGFLVLLSTVLLASYMCCRASRNRSFNSNDNDNNGN 75

Query: 63  RSDA------GIILPQIIFVAEDDGAPDRDDDNGVVGLDQAVINSYPKFPFSKDKSMAGA 122
            +D       GI+LP+IIFVAED+   +RD +   VGLDQAVINSYPKF F+KD S  G 
Sbjct: 76  DNDNSNSVPDGILLPRIIFVAEDEDDQERDLETSAVGLDQAVINSYPKFQFTKDGSSNGN 135

Query: 123 NCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQE 182
           +  CSICLCEYK+ EMLRMMPECRH+FHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPL E
Sbjct: 136 STTCSICLCEYKDLEMLRMMPECRHFFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLSE 195

Query: 183 VVPLSQYMADRRRR 191
           VVPLSQY ADRRRR
Sbjct: 196 VVPLSQYAADRRRR 209

[Close]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match: gi|985466873|ref|XP_015389663.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC102624556 [Citrus sinensis])

HSP 1 Score: 247.3 bits (630), Expect = 2.2e-62
Identity = 134/198 (67.68%), Postives = 151/198 (76.26%), Query Frame = 1 

Query: 3   SSSTASSSNYSFAKLGFGYAIAIALAFLVLLSALLLAFYVCCRASRS-RNLRLSSSRPPP 62
           S+    S NY    +G GY+IAIAL FLVLLS +LLA Y+CCR + S  N   +      
Sbjct: 2   STPATPSPNY-LTNIGLGYSIAIALGFLVLLSTVLLASYICCRRNNSSHNSNANPHENNN 61

Query: 63  SRSDAGIILPQIIFVAEDDGAPD---RDDDNGVVGLDQAVINSYPKFPFSKDKSMAG--- 122
           S S+ GIILP+IIFVAEDDG  +   +DDDN VVGLDQAVINSYPKF F+K+ S++G   
Sbjct: 62  SVSNDGIILPRIIFVAEDDGQEENRNQDDDNLVVGLDQAVINSYPKFQFTKE-SVSGNNN 121

Query: 123 ---ANCVCSICLCEYKEAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLST 182
               N  CSICLCEYK+ EMLRMMPECRHYFHLCC+DAWLKLNGSCPVCRNSPLPTPLST
Sbjct: 122 SNNINTTCSICLCEYKDLEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLST 181

Query: 183 PLQEVVPLSQYMADRRRR 191
           PLQEVVPLSQY ADRRRR
Sbjct: 182 PLQEVVPLSQYAADRRRR 197

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL67_ARATH1.2e-6064.97RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1[more]
ATL68_ARATH5.7e-5561.90RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1[more]
ATL70_ARATH9.2e-2944.44RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1[more]
ATL69_ARATH1.2e-2538.55Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1[more]
ATL71_ARATH6.2e-2537.50Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1[more]
BLAST of Cp4.1LG08g01250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7B6_CUCSA4.2e-8989.30Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121045 PE=4 SV=1[more]
A0A067K9Q7_JATCU4.0e-6365.98Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14325 PE=4 SV=1[more]
A0A067H3A6_CITSI1.5e-6267.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029203mg PE=4 SV=1[more]
K7MUE9_SOYBN8.3e-6168.68Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A151RYI3_CAJCA1.1e-6065.34RING-H2 finger protein ATL3K OS=Cajanus cajan GN=KK1_030715 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01250 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46160.16.7e-6264.97 RING/U-box superfamily protein[more]
AT3G61550.13.2e-5661.90 RING/U-box superfamily protein[more]
AT2G35910.15.2e-3044.44 RING/U-box superfamily protein[more]
AT5G07040.17.0e-2738.55 RING/U-box superfamily protein[more]
AT5G06490.13.5e-2637.50 RING/U-box superfamily protein[more]
BLAST of Cp4.1LG08g01250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432106|ref|XP_004133841.1|6.1e-8989.30PREDICTED: RING-H2 finger protein ATL67 [Cucumis sativus][more]
gi|659075129|ref|XP_008437981.1|7.9e-8988.65PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo][more]
gi|1009142685|ref|XP_015888853.1|1.4e-6472.34PREDICTED: RING-H2 finger protein ATL68-like [Ziziphus jujuba][more]
gi|802694899|ref|XP_012083296.1|5.7e-6365.98PREDICTED: RING-H2 finger protein ATL67 [Jatropha curcas][more]
gi|985466873|ref|XP_015389663.1|2.2e-6267.68PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC102624556 [Citrus sin... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0032259 methylation
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01250.1Cp4.1LG08g01250.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 119..162
score: 3.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 120..161
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 120..162
score: 1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 119..163
score: 2.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 76..187
score: 7.6E-99coord: 3..56
score: 7.6
NoneNo IPR availablePANTHERPTHR14155:SF71RING-H2 FINGER PROTEIN ATL67-RELATEDcoord: 76..187
score: 7.6E-99coord: 3..56
score: 7.6
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 105..167
score: 1.64