CmaCh14G020710 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G020710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ring finger protein, putative
Location	Cma_Chr14 : 14374980 .. 14375549 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

mRNA sequence

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

Coding sequence (CDS)

ATGTCCATCTCCCCTTCTTCCTCCTCCTCCTATTACTCCTTCTCTAAGATCGGCCTCGGCTACGCCATTGCCATAGCCCTCGCCTTCCTCGTCCTCCTTTCCGCTCTTCTTCTCGCCTTCTACGTCTGCTGTCGCGCCTCCCGCTCCCGCTCCCGCTATCTCCACCGCCACCCCGCTCCCTCTCGTTCCGATGCCGGAATCATTCTCCCTCAGATCATCTTCGTCGCCGAGGACGACGCCTCTCCAGATCCCAACGATGATAACGGCGTCCTTGGCCTCGACCAGGCTGTCATTAACTCTTACCCTAAATTCCCCTTCTCCAGGGATAAATCCATGGCCGGAGCCGATTGCGTCTGCTCCATCTGCCTCTGTGAGTATAAGGACGCGGAGATGCTGAGGATGATGCCCGAGTGTCGACACTGCTTCCATCTCTGTTGCATCGATGCTTGGTTGAAGCTTAATTGCTCTTGTCCGGTTTGCCGGAATTCGCCACTCCCGACGCCGCTTTCCACTCCTCTTCAGGAGGTTGTGCCGCTCTCCCAATACATGGCGGATCGGAGAAGGAGATGA

Protein sequence

MSISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRRR

Homology

[Close]

BLAST of CmaCh14G020710 vs. Swiss-Prot
Match: ATL67_ARATH (RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 8.0e-57
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 1


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRS 63
           SP  + ++   + +G GY+IAIAL FLVLLS +LL+ Y+CCR SR R+  +      S  
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVE-----STG 79

Query: 64  DAG--IILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMA-------G 123
           D G  +ILP+IIFVAE+D + D    + V+GLDQAVINSYPKF FS+D S A       G
Sbjct: 80  DRGGSVILPRIIFVAEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG 139

Query: 124 ADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLS 183
            D  CSICLCEYK+AEMLRMMPEC+H FHLCC+DAWLKLN SCPVCRNSPLP    TPLS
Sbjct: 140 GDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLS 199

Query: 184 TPLQEVVPLSQYMADRRR 189
           TPL EVVPLSQY ADRRR
Sbjct: 200 TPLSEVVPLSQYAADRRR 211

[Close]

BLAST of CmaCh14G020710 vs. Swiss-Prot
Match: ATL68_ARATH (RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.9e-51
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = 1


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR--SRYLHRHPAPSRSDAGIILPQI 74
           + +GLGY+IAIAL FLVL+S ++L+ Y+CCRASR R  +   + +   S SD G+I+P+I
Sbjct: 22  TSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRI 81

Query: 75  IFVAEDDASPDPNDDNGVLG-LDQAVINSYPKFPFSRDKSMA----------GADCVCSI 134
           IFVAEDD   D    N V+G LD +VINSYPKF F++D +            G +  CSI
Sbjct: 82  IFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSI 141

Query: 135 CLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLSTPLQEVV 189
           CLCEY + EMLRMMPEC+H FH+ C+DAWLKLN SCPVCRNSPLP    TP STPL EVV
Sbjct: 142 CLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVV 201

[Close]

BLAST of CmaCh14G020710 vs. Swiss-Prot
Match: ATL70_ARATH (RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 1


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAE 77
           G  Y I +++  L+L++ + L  Y C R   S S      P+ +  D+  I      V  
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS------PSQTNQDSTRIHHHHHHVII 122

Query: 78  DDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPE 137
           D           V GLD+  I SYPK  +S  K    A C C+ICL +YK   +LR +P+
Sbjct: 123 DV----------VPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPD 182

Query: 138 CRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 188
           C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]

BLAST of CmaCh14G020710 vs. Swiss-Prot
Match: ATL69_ARATH (Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.0e-27
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIF 74
           S +GLGY IAIA++ LVL+S ++LA Y+C R S+S  R        + SD  + LP    
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIR-SKSTGR------DEATSDVVLDLPSPAA 68

Query: 75  VAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADC-VCSICLCEYKDAEMLR 134
             +             LGLD+ VI SYP+      + +   +   CSICLC+Y+  E +R
Sbjct: 69  EVK-------------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVR 128

Query: 135 MMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 181
            +PEC HCFH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 129 CIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of CmaCh14G020710 vs. Swiss-Prot
Match: ATL71_ARATH (Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.0e-25
Identity = 67/173 (38.73%), Postives = 97/173 (56.07%), Query Frame = 1


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILP--QIIFV 77
           GL Y I +++  L+L++ + L  Y C R+  S S          + ++   LP  Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDASPDPNDDNGVLGLDQAVINSYPKFPF-------SRDKSMAGADCVCSICLCEYKD 137
            EDD S     +  VLGL + VI  +PK P+       S  K  +   C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 138 AEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQ 182
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

[Close]

BLAST of CmaCh14G020710 vs. TrEMBL
Match: A0A0A0L7B6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121045 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.2e-85
Identity = 166/185 (89.73%), Postives = 173/185 (93.51%), Query Frame = 1


Query: 6   SSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPS-RSD 65
           SS SS YSFS+IGLGY+IAIALAFLVLLSALLLAFYVCCRASRSR  +L R P PS RSD
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSR--HLRRPPPPSSRSD 61

Query: 66  AGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLC 125
           AGIILPQIIFVAEDDA+PD +DDNGV+GLDQ VINSYPKFPFSRDKSMAGA+CVCSICLC
Sbjct: 62  AGIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLC 121

Query: 126 EYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 185
           EYKDAEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQYMA
Sbjct: 122 EYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 181

Query: 186 DRRRR 190
           DRRRR
Sbjct: 182 DRRRR 184

[Close]

BLAST of CmaCh14G020710 vs. TrEMBL
Match: A0A151RYI3_CAJCA (RING-H2 finger protein ATL3K OS=Cajanus cajan GN=KK1_030715 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 3.5e-59
Identity = 121/187 (64.71%), Postives = 147/187 (78.61%), Query Frame = 1


Query: 3   ISPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSR 62
           +SP    SY  FS +GLGY+IAIALAFL LLS LLL+ Y+CCRA R+R+R   +  + +R
Sbjct: 1   MSPPHPHSY--FSNLGLGYSIAIALAFLFLLSTLLLSSYLCCRARRNRTRAAAQAASRAR 60

Query: 63  S-DAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSI 122
           S D G+ILP++IFVAED+   D  +++  +GL+Q+VINSYP+F FS  +     +  CSI
Sbjct: 61  SADGGVILPRVIFVAEDE---DEEEESAAVGLEQSVINSYPRFEFSNREGARSNNTTCSI 120

Query: 123 CLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQ 182
           CLCEYKD+EMLRMMPECRH FH CC+D+WLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQ
Sbjct: 121 CLCEYKDSEMLRMMPECRHFFHQCCLDSWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQ 180

Query: 183 YMADRRR 189
           Y ADRRR
Sbjct: 181 YAADRRR 182

[Close]

BLAST of CmaCh14G020710 vs. TrEMBL
Match: F6I654_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02070 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-59
Identity = 132/204 (64.71%), Postives = 150/204 (73.53%), Query Frame = 1


Query: 1   MSISPSSSSSYYS--------------FSKIGLGYAIAIALAFLVLLSALLLAFYVCCRA 60
           MS +P + SSY S               S +GLGYAIAIA AFLVLLS +LLA Y+CCR 
Sbjct: 1   MSTTPITPSSYASAAAAAAAAPPPPTYLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCR- 60

Query: 61  SRSRSRYLHRHPA-PSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFP 120
            R  S +  R+PA  + S  GI+LP+IIFVAED    +  D N V+GLDQAVI+SYPKFP
Sbjct: 61  RRPLSPHHSRNPASAANSSDGIVLPRIIFVAED----EDEDQNVVVGLDQAVIDSYPKFP 120

Query: 121 FSRDKSMAGADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPL 180
           FS  KS    D VCSICLCEYKD+EMLRM+P+CRHCFHL C+DAWLKLN SCPVCRNSPL
Sbjct: 121 FS--KSNTHLDSVCSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPL 180

Query: 181 PTPLSTPLQEVVPLSQYMADRRRR 190
           PTPLSTPL E+VPLSQY ADRRRR
Sbjct: 181 PTPLSTPLSELVPLSQYPADRRRR 197

[Close]

BLAST of CmaCh14G020710 vs. TrEMBL
Match: A5CBV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040608 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-59
Identity = 132/204 (64.71%), Postives = 150/204 (73.53%), Query Frame = 1


Query: 1   MSISPSSSSSYYS--------------FSKIGLGYAIAIALAFLVLLSALLLAFYVCCRA 60
           MS +P + SSY S               S +GLGYAIAIA AFLVLLS +LLA Y+CCR 
Sbjct: 1   MSTTPITPSSYASAAAAAAAAPPPPTYLSNLGLGYAIAIAFAFLVLLSTVLLASYLCCR- 60

Query: 61  SRSRSRYLHRHPA-PSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFP 120
            R  S +  R+PA  + S  GI+LP+IIFVAED    +  D N V+GLDQAVI+SYPKFP
Sbjct: 61  RRPLSPHHSRNPASAANSSDGIVLPRIIFVAED----EDEDQNVVVGLDQAVIDSYPKFP 120

Query: 121 FSRDKSMAGADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPL 180
           FS  KS    D VCSICLCEYKD+EMLRM+P+CRHCFHL C+DAWLKLN SCPVCRNSPL
Sbjct: 121 FS--KSNTHLDSVCSICLCEYKDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRNSPL 180

Query: 181 PTPLSTPLQEVVPLSQYMADRRRR 190
           PTPLSTPL E+VPLSQY ADRRRR
Sbjct: 181 PTPLSTPLSELVPLSQYPADRRRR 197

[Close]

BLAST of CmaCh14G020710 vs. TrEMBL
Match: A0A067K9Q7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14325 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 7.7e-59
Identity = 121/182 (66.48%), Postives = 139/182 (76.37%), Query Frame = 1


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDA-------GI 74
           + +GLGY+IAIAL FLVLLS +LLA Y+CCRASR+RS   + +      +        GI
Sbjct: 28  TNLGLGYSIAIALGFLVLLSTVLLASYMCCRASRNRSFNSNDNDNNGNDNDNSNSVPDGI 87

Query: 75  ILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYK 134
           +LP+IIFVAED+   + + +   +GLDQAVINSYPKF F++D S  G    CSICLCEYK
Sbjct: 88  LLPRIIFVAEDEDDQERDLETSAVGLDQAVINSYPKFQFTKDGSSNGNSTTCSICLCEYK 147

Query: 135 DAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 190
           D EMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPL EVVPLSQY ADRR
Sbjct: 148 DLEMLRMMPECRHFFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLSEVVPLSQYAADRR 207

[Close]

BLAST of CmaCh14G020710 vs. TAIR10
Match: AT2G46160.1 (AT2G46160.1 RING/U-box superfamily protein)

HSP 1 Score: 221.5 bits (563), Expect = 4.5e-58
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 1


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRS 63
           SP  + ++   + +G GY+IAIAL FLVLLS +LL+ Y+CCR SR R+  +      S  
Sbjct: 20  SPPQAGNHSYLTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRRTTAVE-----STG 79

Query: 64  DAG--IILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMA-------G 123
           D G  +ILP+IIFVAE+D + D    + V+GLDQAVINSYPKF FS+D S A       G
Sbjct: 80  DRGGSVILPRIIFVAEED-NEDLEAGDVVVGLDQAVINSYPKFHFSKDTSAASSDGFGGG 139

Query: 124 ADCVCSICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLS 183
            D  CSICLCEYK+AEMLRMMPEC+H FHLCC+DAWLKLN SCPVCRNSPLP    TPLS
Sbjct: 140 GDTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRNSPLPTPTSTPLS 199

Query: 184 TPLQEVVPLSQYMADRRR 189
           TPL EVVPLSQY ADRRR
Sbjct: 200 TPLSEVVPLSQYAADRRR 211

[Close]

BLAST of CmaCh14G020710 vs. TAIR10
Match: AT3G61550.1 (AT3G61550.1 RING/U-box superfamily protein)

HSP 1 Score: 203.0 bits (515), Expect = 1.6e-52
Identity = 112/191 (58.64%), Postives = 136/191 (71.20%), Query Frame = 1


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSR--SRYLHRHPAPSRSDAGIILPQI 74
           + +GLGY+IAIAL FLVL+S ++L+ Y+CCRASR R  +   + +   S SD G+I+P+I
Sbjct: 22  TSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRI 81

Query: 75  IFVAEDDASPDPNDDNGVLG-LDQAVINSYPKFPFSRDKSMA----------GADCVCSI 134
           IFVAEDD   D    N V+G LD +VINSYPKF F++D +            G +  CSI
Sbjct: 82  IFVAEDD---DLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSI 141

Query: 135 CLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLSTPLQEVV 189
           CLCEY + EMLRMMPEC+H FH+ C+DAWLKLN SCPVCRNSPLP    TP STPL EVV
Sbjct: 142 CLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVV 201

[Close]

BLAST of CmaCh14G020710 vs. TAIR10
Match: AT2G35910.1 (AT2G35910.1 RING/U-box superfamily protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 1


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIFVAE 77
           G  Y I +++  L+L++ + L  Y C R   S S      P+ +  D+  I      V  
Sbjct: 63  GFRYGIGVSIGVLLLITTITLTSYYCTRNQLSSS------PSQTNQDSTRIHHHHHHVII 122

Query: 78  DDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKDAEMLRMMPE 137
           D           V GLD+  I SYPK  +S  K    A C C+ICL +YK   +LR +P+
Sbjct: 123 DV----------VPGLDEDTIQSYPKILYSEAKGPTTASC-CAICLGDYKGKHLLRQLPD 182

Query: 138 CRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRR 188
           C H FHL CID WL+LN +CPVCR SPLPTPLSTPL EVVPL+  +A  R
Sbjct: 183 CNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPLSTPLAEVVPLASSVAATR 215

[Close]

BLAST of CmaCh14G020710 vs. TAIR10
Match: AT5G07040.1 (AT5G07040.1 RING/U-box superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.8e-28
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1


Query: 15  SKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILPQIIF 74
           S +GLGY IAIA++ LVL+S ++LA Y+C R S+S  R        + SD  + LP    
Sbjct: 9   SGVGLGYGIAIAVSILVLISFIMLASYICIR-SKSTGR------DEATSDVVLDLPSPAA 68

Query: 75  VAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADC-VCSICLCEYKDAEMLR 134
             +             LGLD+ VI SYP+      + +   +   CSICLC+Y+  E +R
Sbjct: 69  EVK-------------LGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREPVR 128

Query: 135 MMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLS 181
            +PEC HCFH  C+D WL+ + +CP+CRNSP P+ L+TPL ++VPL+
Sbjct: 129 CIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRLATPLSDLVPLA 155

[Close]

BLAST of CmaCh14G020710 vs. TAIR10
Match: AT5G06490.1 (AT5G06490.1 RING/U-box superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 4.5e-26
Identity = 67/173 (38.73%), Postives = 97/173 (56.07%), Query Frame = 1


Query: 18  GLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDAGIILP--QIIFV 77
           GL Y I +++  L+L++ + L  Y C R+  S S          + ++   LP  Q  F 
Sbjct: 22  GLAYGIGVSIGILMLITTITLTSYYCTRSHISASPTTTPRTRRRQRESNGTLPPGQERFD 81

Query: 78  AEDDASPDPNDDNGVLGLDQAVINSYPKFPF-------SRDKSMAGADCVCSICLCEYKD 137
            EDD S     +  VLGL + VI  +PK P+       S  K  +   C CSICL +YK 
Sbjct: 82  FEDDESDTVVVE--VLGLTEEVIKGFPKLPYEEARVSYSLQKESSTTSC-CSICLADYKK 141

Query: 138 AEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQ 182
            +M+R++P+C H FH  C+D WL+L+ +CPVCR SPLP+P  TP+ +VVP S+
Sbjct: 142 MDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSPAMTPVADVVPFSR 191

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: gi|449432106|ref|XP_004133841.1| (PREDICTED: RING-H2 finger protein ATL67 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 3.1e-85
Identity = 166/185 (89.73%), Postives = 173/185 (93.51%), Query Frame = 1


Query: 6   SSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPS-RSD 65
           SS SS YSFS+IGLGY+IAIALAFLVLLSALLLAFYVCCRASRSR  +L R P PS RSD
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSR--HLRRPPPPSSRSD 61

Query: 66  AGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLC 125
           AGIILPQIIFVAEDDA+PD +DDNGV+GLDQ VINSYPKFPFSRDKSMAGA+CVCSICLC
Sbjct: 62  AGIILPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRDKSMAGANCVCSICLC 121

Query: 126 EYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 185
           EYKDAEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQYMA
Sbjct: 122 EYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 181

Query: 186 DRRRR 190
           DRRRR
Sbjct: 182 DRRRR 184

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: gi|659075129|ref|XP_008437981.1| (PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo])

HSP 1 Score: 320.5 bits (820), Expect = 2.0e-84
Identity = 164/185 (88.65%), Postives = 173/185 (93.51%), Query Frame = 1


Query: 6   SSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAP-SRSD 65
           SS SS YSFS+IGLGY+IAIALAFLVLLSALLLAFYVCCRASRSR  +L R P P SRS+
Sbjct: 2   SSPSSTYSFSRIGLGYSIAIALAFLVLLSALLLAFYVCCRASRSR--HLRRPPPPPSRSE 61

Query: 66  AGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLC 125
            GIILPQIIFVAEDDA+PD +DDNGV+GLDQ+VINSYPKFPFSRDKSMAGA+CVCSICLC
Sbjct: 62  TGIILPQIIFVAEDDAAPDRDDDNGVVGLDQSVINSYPKFPFSRDKSMAGANCVCSICLC 121

Query: 126 EYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 185
           EYKDAEMLRMMPECRH FHLCCIDAWLKLN SCPVCRNSPLPTPLSTPLQEVVPLSQYMA
Sbjct: 122 EYKDAEMLRMMPECRHYFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPLSQYMA 181

Query: 186 DRRRR 190
           DRRRR
Sbjct: 182 DRRRR 184

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: gi|1009142685|ref|XP_015888853.1| (PREDICTED: RING-H2 finger protein ATL68-like [Ziziphus jujuba])

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-61
Identity = 132/190 (69.47%), Postives = 152/190 (80.00%), Query Frame = 1


Query: 4   SPSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRH----PA 63
           +P+ +S  Y  + +GLGY+IAIAL FLVLLS LLLA Y+CCRASR RS     +    P 
Sbjct: 12  NPTPNSPTY-LTNLGLGYSIAIALGFLVLLSTLLLASYICCRASRHRSPPSQTNNTSDPN 71

Query: 64  PSRSDAGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVC 123
           P+ SD GI+LP+IIFVAEDD   D +DD+ V+GLDQ+VINSYPKFP+S+D  +   +  C
Sbjct: 72  PAPSD-GIMLPRIIFVAEDDDQRD-DDDSAVVGLDQSVINSYPKFPWSKD--LDNKESTC 131

Query: 124 SICLCEYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPL 183
           SICLCEYKD EMLRMMPECRH FHLCC+DAWLKLN SCPVCRNSPLPTPLSTPLQEVVPL
Sbjct: 132 SICLCEYKDFEMLRMMPECRHYFHLCCVDAWLKLNGSCPVCRNSPLPTPLSTPLQEVVPL 191

Query: 184 SQYMADRRRR 190
           SQY ADRRRR
Sbjct: 192 SQYAADRRRR 196

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: gi|719986120|ref|XP_010251603.1| (PREDICTED: RING-H2 finger protein ATL67 [Nelumbo nucifera])

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 123/180 (68.33%), Postives = 139/180 (77.22%), Query Frame = 1


Query: 13  SFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSDA----GII 72
           + S IGLGYAIAIAL FLVLLS +LLA YVCCR+SR+RSR        S  D+    GII
Sbjct: 34  NLSNIGLGYAIAIALGFLVLLSTVLLASYVCCRSSRNRSRSSDPENPGSNPDSSHSNGII 93

Query: 73  LPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLCEYKD 132
           LP+IIFVAEDD     +DD+ V+GL+QAVINSYPKFPF + K     D VCSICLC+YKD
Sbjct: 94  LPRIIFVAEDDDDDSRDDDSLVVGLNQAVINSYPKFPFCKSKDRG--DSVCSICLCDYKD 153

Query: 133 AEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLPTPLSTPLQEVVPLSQYMADRRR 189
            EMLRMMP+C H FHLCCIDAWL+LN SCPVCRNSP PTPLSTPL E+VPLSQY  +RRR
Sbjct: 154 GEMLRMMPDCHHFFHLCCIDAWLRLNASCPVCRNSPFPTPLSTPLSELVPLSQYPGNRRR 211

[Close]

BLAST of CmaCh14G020710 vs. NCBI nr
Match: gi|729425589|ref|XP_010559104.1| (PREDICTED: RING-H2 finger protein ATL67-like [Tarenaya hassleriana])

HSP 1 Score: 236.9 bits (603), Expect = 2.9e-59
Identity = 129/188 (68.62%), Postives = 145/188 (77.13%), Query Frame = 1


Query: 5   PSSSSSYYSFSKIGLGYAIAIALAFLVLLSALLLAFYVCCRASRSRSRYLHRHPAPSRSD 64
           PS S   Y  + IGLGY+IAIAL FLVLLS +LL+ YVCCRASR RS       A +  D
Sbjct: 12  PSVSIPSY-LTGIGLGYSIAIALGFLVLLSTILLSSYVCCRASRRRSS--SSATASAAVD 71

Query: 65  AGIILPQIIFVAEDDASPDPNDDNGVLGLDQAVINSYPKFPFSRDKSMAGADCVCSICLC 124
            GIILP+IIFVAEDD   + N +N V+GLDQ+VINSYPKF FS++ S  G D  CSICLC
Sbjct: 72  GGIILPRIIFVAEDDDDLEANGENIVVGLDQSVINSYPKFQFSKE-SDGGGDATCSICLC 131

Query: 125 EYKDAEMLRMMPECRHCFHLCCIDAWLKLNCSCPVCRNSPLP----TPLSTPLQEVVPLS 184
           EY++AEMLRMMPEC+H FHLCC+DAWLKLN SCPVCRNSPLP    TPLSTPL EVVPLS
Sbjct: 132 EYREAEMLRMMPECKHSFHLCCLDAWLKLNGSCPVCRNSPLPTPQSTPLSTPLSEVVPLS 191

Query: 185 QYMADRRR 189
           QY ADRRR
Sbjct: 192 QYAADRRR 195

The following BLAST results are available for this feature:

BLAST of CmaCh14G020710 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL67_ARATH	8.0e-57	62.12	RING-H2 finger protein ATL67 OS=Arabidopsis thaliana GN=ATL67 PE=2 SV=1	[more]
ATL68_ARATH	2.9e-51	58.64	RING-H2 finger protein ATL68 OS=Arabidopsis thaliana GN=ATL68 PE=2 SV=1	[more]
ATL70_ARATH	1.3e-27	42.94	RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2 SV=1	[more]
ATL69_ARATH	5.0e-27	41.32	Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana GN=ATL69 PE=3 SV=1	[more]
ATL71_ARATH	8.0e-25	38.73	Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana GN=ATL71 PE=3 SV=1	[more]

BLAST of CmaCh14G020710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7B6_CUCSA	2.2e-85	89.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G121045 PE=4 SV=1	[more]
A0A151RYI3_CAJCA	3.5e-59	64.71	RING-H2 finger protein ATL3K OS=Cajanus cajan GN=KK1_030715 PE=4 SV=1	[more]
F6I654_VITVI	4.5e-59	64.71	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0046g02070 PE=4 SV=...	[more]
A5CBV0_VITVI	4.5e-59	64.71	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040608 PE=4 SV=1	[more]
A0A067K9Q7_JATCU	7.7e-59	66.48	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14325 PE=4 SV=1	[more]

BLAST of CmaCh14G020710 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46160.1	4.5e-58	62.12	RING/U-box superfamily protein	[more]
AT3G61550.1	1.6e-52	58.64	RING/U-box superfamily protein	[more]
AT2G35910.1	7.5e-29	42.94	RING/U-box superfamily protein	[more]
AT5G07040.1	2.8e-28	41.32	RING/U-box superfamily protein	[more]
AT5G06490.1	4.5e-26	38.73	RING/U-box superfamily protein	[more]

BLAST of CmaCh14G020710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432106\|ref\|XP_004133841.1\|	3.1e-85	89.73	PREDICTED: RING-H2 finger protein ATL67 [Cucumis sativus]	[more]
gi\|659075129\|ref\|XP_008437981.1\|	2.0e-84	88.65	PREDICTED: RING-H2 finger protein ATL67 [Cucumis melo]	[more]
gi\|1009142685\|ref\|XP_015888853.1\|	1.1e-61	69.47	PREDICTED: RING-H2 finger protein ATL68-like [Ziziphus jujuba]	[more]
gi\|719986120\|ref\|XP_010251603.1\|	1.7e-59	68.33	PREDICTED: RING-H2 finger protein ATL67 [Nelumbo nucifera]	[more]
gi\|729425589\|ref\|XP_010559104.1\|	2.9e-59	68.62	PREDICTED: RING-H2 finger protein ATL67-like [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G020710.1	CmaCh14G020710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 118..161 score: 4.
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 119..160 score: 0.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 119..161 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 117..162 score: 2.3
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 75..186 score: 1.4E-94coord: 3..56 score: 1.4
None	No IPR available	PANTHER	PTHR14155:SF71	RING-H2 FINGER PROTEIN ATL67-RELATED	coord: 75..186 score: 1.4E-94coord: 3..56 score: 1.4
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 112..166 score: 5.44

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G020710	Cucsa.258750	Cucumber (Gy14) v1	cgycmaB0709
CmaCh14G020710	Cla021201	Watermelon (97103) v1	cmawmB242
CmaCh14G020710	MELO3C006076	Melon (DHL92) v3.5.1	cmameB242
CmaCh14G020710	CSPI03G08440	Wild cucumber (PI 183967)	cmacpiB255
CmaCh14G020710	CmoCh06G010780	Cucurbita moschata (Rifu)	cmacmoB271
CmaCh14G020710	CmoCh14G021290	Cucurbita moschata (Rifu)	cmacmoB245
CmaCh14G020710	Lsi05G020750	Bottle gourd (USVL1VR-Ls)	cmalsiB245
CmaCh14G020710	Cp4.1LG03g16550	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G020710	Cp4.1LG08g01250	Cucurbita pepo (Zucchini)	cmacpeB292
CmaCh14G020710	MELO3C006076.2	Melon (DHL92) v3.6.1	cmamedB273
CmaCh14G020710	CsaV3_3G008560	Cucumber (Chinese Long) v3	cmacucB0291
CmaCh14G020710	Cla97C05G081510	Watermelon (97103) v2	cmawmbB263
CmaCh14G020710	CsGy3G008550	Cucumber (Gy14) v2	cgybcmaB318
CmaCh14G020710	Carg20974	Silver-seed gourd	carcmaB0683
CmaCh14G020710	Carg20862	Silver-seed gourd	carcmaB1373

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G020710	CmaCh00G003410	Cucurbita maxima (Rimu)	cmacmaB011
CmaCh14G020710	CmaCh06G010230	Cucurbita maxima (Rimu)	cmacmaB279

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G020710	Watermelon (97103) v2	cmawmbB247
CmaCh14G020710	Watermelon (97103) v2	cmawmbB262
CmaCh14G020710	Cucurbita maxima (Rimu)	cmacmaB242
CmaCh14G020710	Cucurbita maxima (Rimu)	cmacmaB243
CmaCh14G020710	Cucurbita maxima (Rimu)	cmacmaB253
CmaCh14G020710	Cucurbita maxima (Rimu)	cmacmaB263
CmaCh14G020710	Cucurbita moschata (Rifu)	cmacmoB255
CmaCh14G020710	Cucurbita moschata (Rifu)	cmacmoB260
CmaCh14G020710	Cucumber (Chinese Long) v2	cmacuB253
CmaCh14G020710	Watermelon (Charleston Gray)	cmawcgB233
CmaCh14G020710	Cucurbita pepo (Zucchini)	cmacpeB253
CmaCh14G020710	Cucurbita pepo (Zucchini)	cmacpeB291
CmaCh14G020710	Bottle gourd (USVL1VR-Ls)	cmalsiB226
CmaCh14G020710	Cucumber (Gy14) v2	cgybcmaB597
CmaCh14G020710	Melon (DHL92) v3.6.1	cmamedB235
CmaCh14G020710	Silver-seed gourd	carcmaB1364
CmaCh14G020710	Cucumber (Chinese Long) v3	cmacucB0305