Cp4.1LG08g01210 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g01210
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRemorin
LocationCp4.1LG08 : 3662266 .. 3665902 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTAGTCGACTCCAACGGATCGCCAAAATTACCCGCCAACACTAACCGTCAGATCAAATTTTGACCACAGTCACTTACTAGTCAAACAAATCAACGGCTGACAAATCAGCACTGCGTCAAAAACCATGGACCTCACATGCAAATCCCACTGTCAGTTGTAAGGCTTACACCACCACCGTTTTTTGATGAGCTCTCCGACCTCTGAGTATATATATATGTAAAGGCCCACAGAGGATAGCGATAAACGTAGGTGAAAATTTTTGGAGATTTTTCATTTCTAATCATTTTTGCTCCGAATTCTGAGAACGATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAGTAATCTCTCTTTTTCCCTCTATGTTATCTGTTCGTTGTGGTGCTTTGATTGTTGCTTGCGATTGCGATGATATCGATTTGTTCATTTCTGTCTCATTTCTTACCTTGATTTATCCCGATATGAAGTGTTGGAGTGCTTGAATTATAGGCTTAGGCGAATTGTTGTGTGCTTTTTTCTTCATCGAGCGCGTACTGTGCATAGATTAGGAATTCAGGCCTTCGTCTTGCTATACTTTTCACACTCTGTTTGATCGTCGAGAAATGGATCTAGTCGAAGAATAGATTCTGTACAAATTTGATTGGGAGTGATGCCGATGCGTGGAAATTTGTTAGATCCAATTGAAATGATGAACACCATATCACGATAATGAACTCTTTCTGATGTTAGTATTGCATTGTTGGAGAAAGTCAAATGTAAATCCATCGCCTTCATATCTGTCGAAGTTCTTTTAATTCTATTCGTATGGGAGAATATTTTCCTCTTCATTAACATGCCGAACGTTTCACTCTTCTTTTTCAAAGTTCAATGACGCGAAAACATCAATGTTTAGGGTTGCATTTGGTATTTATCCAATAAGTTAGGTTCGAATTGAATCGATATTTTTATCTTTCTTTGTATTTTAGTACCATTTTGGTCTTTTATTTCCTAAGTACTTCTTAATTCGCAATCCCAGCATAATACTATTCACAGAAAGTCTCGTTTCACTCTTTTCCCGGATTTCCAGAGATGAAGAGAAATAAGTTTTTGTGCCTCTTGAATAATTTTTCCTCTCTTTGTGTTTGTTATCAGTGACATATGCTGTAATGGGCCCATAGGCGTTTCTGATACTCTTTGGTTTTAACTGCCACTTAATTTATTCTTCAATATGCTTAAAGTGACAAATTGAAGATTATGCTTTAGCTTTTTATTAATTGTTTCCTTTATAGGTGTAAAGGAAGACATTGTTCATAAAAAAAGCTACAAATTGACATTATAGCTTTCTCTAATATGATTGTTTAGTAATTAGCAGTTGGGTAAGGTAGAATCAAGGCATTCGTCTTTATCAATACTTTTGAAGATGCTAATGCTAATAATGCATCACAGCTGTCTAGCGTCGTCTTGAAGAATGATCTGTGTCCTTTCTGTCATTTGATTCTTCTTACTCGATAAAATTGGCCAAGAATTTTAACTAGACTTGTTTAAGTTGCATCTTAACGACATACTACCTTATGGTTTTAACTTGCCATCTGTTTACTTTCCTTGGTAACTATTGATGGGGTGACAGACAGGGTTCAGACAATCGGTCTAACTCTCACCATGGATAGAGTTAGACATTTTGCCTGTGATTTGAAAATCATTACTCAGTTTGCTTTATACTGCGTATACTTCAATTCATTTTCATCCAAATTTCTAGCTAAAGTTAATATAGCATTGCTTTTGTCCCACCTTGATAACTTTTGTTTCCATCTTTTATTATAGCTTGTTTGATTTTCCTTCTAGTTTAATGGCTTTGTACTGTATTATACAGTTACCTTTGTTTATTGCATTAATTAGCCTGAAAACTCTATCTTTGGGTGCTTTTATAATTGCTTTACTGTTGGATCTTGGCAGAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGGTGAGCGTACAGCACGCATCTTATCCCATCTAAGTCTTCTAGTTTTACAACAATAAAATATTTTTAAACCTTTGTGCTGAAATCACAAGATTGTCCTGAAGAATGCTATATTTGCTGTGGTAACAAGTTGATCGTTCACAAACTGACCTGATCCTCAATTGTCTTAGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGTAAGGCTTTGATTGAACTCATCCTATTTACTTATTAGATACAGGGGAGCGACCTGGATTCTGAATCCCAACATTCATTGCTCTAATCTCCAAACTTAAAATTCAACCTTTTCCTGTATCACATCAGTATTCATGTCATGATATGAACTTATGAACTGAAATATTTGTCTGACAATTTAATAGGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGTAACTATTAATCCCTGTTCCTATTCTCTGGTTTAACAATAATTTCCAACTGGACATTTGAGGGATGTTGAACACATCTCTTTGTAGAGAACACTCTGCACTCTTTATTAACACTAATCGAGAAGAGATTTACAAGGCTATAAAAATTATTGCACTCTATACCTTTTATTTCTTTTGGATGAAAACCTAGTTAGGATGGAGAATATTTACAATAGAATCTATCCCTAAAATATCTCGATCTTTGGGTGGAGGGTATTTATCTATTCCTAAGATATCTTAATATTTTTCATAAAATATCTGGATCTTTTTCTTAANGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGGCTGTTGCACAAAATGTAGGTACCTTTATTCTTAAAATACCTCAATCATGAAAAAATGAATATGGGTTCATACAATTAGAGTATAAATGGTAACGAGAAATAGAGTAAAAAAAACGTGAAATATTCTGGATTTGATTTGAGAAAGAAAAGTGGATAAGGAGAAGTGTGGAATTGTAGTATAACAAGGTTGAGAATAACAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAAATGTGTGATCGATTAATAATCCTGTGTGTATTTTTCCTGTTTTTTGGTGTAAATCTTTTCATGTTTGGATGTTCGTCTTCGTCTTCTCCGTCTTCATAGTGTTTAAGAATTTTGTTTTGTTTATATAAAAATGTAAGATAAAAGTGGTGTTTTTTGGGTTTTGTTTGTGTGTTTCAAAAACTATAGTAAACTTTAAAAGCTCATTTCCATGAATTATACCATTTACACTGTGAATTGTTCACTAATTATTGCTTTTACTAATTTACCCTCTCATTTCTTAATCCT

mRNA sequence

CGTAGTCGACTCCAACGGATCGCCAAAATTACCCGCCAACACTAACCGTCAGATCAAATTTTGACCACAGTCACTTACTAGTCAAACAAATCAACGGCTGACAAATCAGCACTGCGTCAAAAACCATGGACCTCACATGCAAATCCCACTGTCAGTTGTAAGGCTTACACCACCACCGTTTTTTGATGAGCTCTCCGACCTCTGAGTATATATATATGTAAAGGCCCACAGAGGATAGCGATAAACGTAGGTGAAAATTTTTGGAGATTTTTCATTTCTAATCATTTTTGCTCCGAATTCTGAGAACGATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAAATGTGTGATCGATTAATAATCCTGTGTGTATTTTTCCTGTTTTTTGGTGTAAATCTTTTCATGTTTGGATGTTCGTCTTCGTCTTCTCCGTCTTCATAGTGTTTAAGAATTTTGTTTTGTTTATATAAAAATGTAAGATAAAAGTGGTGTTTTTTGGGTTTTGTTTGTGTGTTTCAAAAACTATAGTAAACTTTAAAAGCTCATTTCCATGAATTATACCATTTACACTGTGAATTGTTCACTAATTATTGCTTTTACTAATTTACCCTCTCATTTCTTAATCCT

Coding sequence (CDS)

ATGGTTGCGGCGCCAGAAAATTCCGATTCCTCTCCTGCTTCAGTGCCGCCGCCGGCGTCAGTTGAGGATAAGGAGAAAGCCTTGGTTCCAGTGCCAGTCTCTAATAAAACCAAAGAAGATTCTGTACCAAAGAAAGCCTCCGGTGGATCAATTGACAGGGATATCGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTTTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAGAAGAAGCTCTCTGCTGTTTCTGCATGGGAGAACAGCAAAAAAGCCAACCTTGAAGCAAAGTTGAAAAAAATTGAGGAACAATTGGAGAAGAAAAAGGCTGAATATGGAGAAAAAATGAAAAACAAAGTAGCCATCATTCACAAAGAAGCAGAAGAAAAGAAGGCAACGGTGGAAGCGCAACGGTCGGAGGAGCTGCTAAAGGCGGAGGAGACGGCTGCCAAATTCCGAGCAACCGGAACCATCCCAAAGAAATTTTTGGGATGTTTTTAA

Protein sequence

MVAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF
Homology
[Close]
BLAST of Cp4.1LG08g01210 vs. Swiss-Prot
Match: REMO_ARATH (Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-46
Identity = 112/172 (65.12%), Postives = 132/172 (76.74%), Query Frame = 1 

Query: 11  SPASVPPPASVE-DKEKALVPVPVSNKTK-------EDSVPKKASGGSIDRDIALAEVEK 70
           +PA  P PA VE   EK   P PV +K         E+  PKKAS GS DRD+ LA++EK
Sbjct: 19  APAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEK 78

Query: 71  EKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGE 130
           EK+ SFIKAWE+SEKSKAEN+AQKK+S V AWENSKKA +EA+L+KIEE+LEKKKA+YGE
Sbjct: 79  EKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGE 138

Query: 131 KMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           KMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Sbjct: 139 KMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]
BLAST of Cp4.1LG08g01210 vs. Swiss-Prot
Match: REMO_SOLTU (Remorin OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-45
Identity = 112/173 (64.74%), Postives = 130/173 (75.14%), Query Frame = 1 

Query: 2   VAAPENSDSSPASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVE 61
           V A E +  +PA  PP    E  + +   V V  K  E +  KK   GSIDRD  LA V 
Sbjct: 28  VVADEKAIVAPALPPPAEEKEKPDDSKALVVVETKAPEPADEKKE--GSIDRDAVLARVA 87

Query: 62  KEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYG 121
            EKR S IKAWE+SEKSKAENKAQKK+SA+ AWENSKKANLEA+LKK+EEQLEKKKAEY 
Sbjct: 88  TEKRVSLIKAWEESEKSKAENKAQKKVSAIGAWENSKKANLEAELKKMEEQLEKKKAEYT 147

Query: 122 EKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EKMKNK+A++HKEAEEK+A +EA+R E+LLKAEE AAK+RATGT PKK LG F
Sbjct: 148 EKMKNKIALLHKEAEEKRAMIEAKRGEDLLKAEELAAKYRATGTAPKKILGIF 198

[Close]
BLAST of Cp4.1LG08g01210 vs. Swiss-Prot
Match: Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 2.9e-45
Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 1 

Query: 16  PPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDS 75
           PPP  + D  KAL  V    K  E+  P K +  S+DRD+ LA++ KEKR SF++AWE+S
Sbjct: 57  PPPEQIFDDSKALTVV---EKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEES 116

Query: 76  EKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEA 135
           EKSKAENKA+KK++ V AWENSKKA +EA+LKKIEEQLEKKKAEY E+MKNKVA IHKEA
Sbjct: 117 EKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEA 176

Query: 136 EEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Sbjct: 177 EERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match: A0A0A0L3M0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122490 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.3e-71
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 1 

Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENS S+PA  PPPASV         EDKEKA+V VP+ NKTKED+VPKKASGGSI
Sbjct: 1   MVTAPENSVSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDTVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 175
            LEKKKAEYGEKMKNKV +IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVVLIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match: T2DM60_PHAVU (Remorin family protein OS=Phaseolus vulgaris GN=PHAVU_010G096300g PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.1e-51
Identity = 125/191 (65.45%), Postives = 145/191 (75.92%), Query Frame = 1 

Query: 10  SSPASVPPPASVED-----------KEKALVPVPV---------------SNKTKEDSVP 69
           + PASVP PA+VE            K  A VP PV               S KT  + V 
Sbjct: 8   AEPASVPAPATVEPQLAEALDSASKKATAAVPAPVAAETKALAVVEKEKESEKTPPEPVK 67

Query: 70  KKASGGSIDRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLE 129
           KKA+GGS+DRDIALAE+EKEKRFS +KAWE+SEKSKAENKAQK LSAV+AWENSKKA LE
Sbjct: 68  KKATGGSLDRDIALAEIEKEKRFSNVKAWEESEKSKAENKAQKHLSAVAAWENSKKAALE 127

Query: 130 AKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRAT 175
           A+L+KIEEQLEKKKAEYGEKMKNK+A++HK+AEEK+ATVEA+R EE+L AEE+AAK+RAT
Sbjct: 128 AQLRKIEEQLEKKKAEYGEKMKNKIALVHKQAEEKRATVEAKRGEEILNAEESAAKYRAT 187

[Close]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match: B9RDP4_RICCO (Remorin, putative OS=Ricinus communis GN=RCOM_1614760 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.3e-51
Identity = 122/162 (75.31%), Postives = 135/162 (83.33%), Query Frame = 1 

Query: 13  ASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAW 72
           A+VP P    D  KAL  V    +   +S PKK SGGS+DRDIALAEVEKEKR SFIKAW
Sbjct: 31  ATVPTPEEKPDDSKALAVV----EKVPESGPKKTSGGSLDRDIALAEVEKEKRNSFIKAW 90

Query: 73  EDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIH 132
           EDSEKSKAENKAQKKLS+V+AWENSKKA LEAKL+KIEEQLEKKKAEY EKMKNKVA++H
Sbjct: 91  EDSEKSKAENKAQKKLSSVTAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKVALVH 150

Query: 133 KEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           K+AEEK+A VEAQR EE+LKAEE AAK+RATG  PKK LGCF
Sbjct: 151 KQAEEKRAMVEAQRGEEVLKAEEMAAKYRATGQTPKKLLGCF 188

[Close]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match: A0A067JXN4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14423 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 9.3e-51
Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 1 

Query: 15  VPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWED 74
           VPPP    D+ KAL  V    +   +S PKK SGGS+DRDIALAEVEKEKR SFIKAWED
Sbjct: 39  VPPPEEKPDESKALAVV----EKIPESAPKKISGGSLDRDIALAEVEKEKRNSFIKAWED 98

Query: 75  SEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKE 134
           SEKSKAENKAQKK SAV AWENSKKA LEAKL+KIEEQLEKKKAEY EKMKNK+A++HK+
Sbjct: 99  SEKSKAENKAQKKKSAVEAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKIALVHKQ 158

Query: 135 AEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           AEEK+A VEAQR EE+LKAEE AAK+RATG  P+K LGCF
Sbjct: 159 AEEKRAIVEAQRGEEMLKAEEMAAKYRATGQTPRKLLGCF 194

[Close]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match: A0A061DUD4_THECC (Remorin family protein OS=Theobroma cacao GN=TCM_005370 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.1e-49
Identity = 116/173 (67.05%), Postives = 135/173 (78.03%), Query Frame = 1 

Query: 13  ASVPPPASVEDKEKALVPVPVSNKTKE-----------DSVPKKASGGSIDRDIALAEVE 72
           A  PPP +V +++ A+ P P   K  +           +  PKK SGGS DRDIALAEVE
Sbjct: 20  AEAPPPKAVSEEKTAVRPPPTEEKPDDSKALAVVEKAPEPAPKKISGGSHDRDIALAEVE 79

Query: 73  KEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYG 132
           KEKR SF++AWEDSEK+KAENKAQKKLS++ AWENSKKA LEAKL+KIEEQLEKKKAEY 
Sbjct: 80  KEKRLSFVRAWEDSEKTKAENKAQKKLSSIVAWENSKKAALEAKLRKIEEQLEKKKAEYA 139

Query: 133 EKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           E MKNKVA++HKEAEEK+A VEA+R EE+LKAEE AAK+RATG  PKK LGCF
Sbjct: 140 ENMKNKVALLHKEAEEKRAMVEAKRGEEVLKAEEMAAKYRATGQTPKKLLGCF 192

[Close]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match: AT2G45820.1 (AT2G45820.1 Remorin family protein)

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-47
Identity = 112/172 (65.12%), Postives = 132/172 (76.74%), Query Frame = 1 

Query: 11  SPASVPPPASVE-DKEKALVPVPVSNKTK-------EDSVPKKASGGSIDRDIALAEVEK 70
           +PA  P PA VE   EK   P PV +K         E+  PKKAS GS DRD+ LA++EK
Sbjct: 19  APAKEPTPAPVEVADEKIHNPPPVESKALAVVEKPIEEHTPKKASSGSADRDVILADLEK 78

Query: 71  EKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGE 130
           EK+ SFIKAWE+SEKSKAEN+AQKK+S V AWENSKKA +EA+L+KIEE+LEKKKA+YGE
Sbjct: 79  EKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVEAQLRKIEEKLEKKKAQYGE 138

Query: 131 KMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           KMKNKVA IHK AEEK+A VEA++ EELLKAEE  AK+RATG +PK   GCF
Sbjct: 139 KMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRATGVVPKATCGCF 190

[Close]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match: AT3G61260.1 (AT3G61260.1 Remorin family protein)

HSP 1 Score: 183.0 bits (463), Expect = 1.6e-46
Identity = 102/159 (64.15%), Postives = 126/159 (79.25%), Query Frame = 1 

Query: 16  PPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDS 75
           PPP  + D  KAL  V    K  E+  P K +  S+DRD+ LA++ KEKR SF++AWE+S
Sbjct: 57  PPPEQIFDDSKALTVV---EKPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEES 116

Query: 76  EKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEA 135
           EKSKAENKA+KK++ V AWENSKKA +EA+LKKIEEQLEKKKAEY E+MKNKVA IHKEA
Sbjct: 117 EKSKAENKAEKKIADVHAWENSKKAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEA 176

Query: 136 EEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           EE++A +EA+R E++LKAEETAAK+RATG +PK   GCF
Sbjct: 177 EERRAMIEAKRGEDVLKAEETAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match: AT5G23750.1 (AT5G23750.1 Remorin family protein)

HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42
Identity = 106/175 (60.57%), Postives = 130/175 (74.29%), Query Frame = 1 

Query: 2   VAAPENSDSSPASVPPPASVEDKE---KALVPVPVSNKTKEDSVPKKASGGSIDRDIALA 61
           VA  E   + P  +P PA  E+K+   KA+VPV      KE    KK   GS++RD  LA
Sbjct: 33  VAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVV----PKEVEEEKKE--GSVNRDAVLA 92

Query: 62  EVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKA 121
            VE EKR S IKAWE++EK K ENKA+KKLS++ +WEN+KKA +EA+LKK+EEQLEKKKA
Sbjct: 93  RVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAAVEAELKKMEEQLEKKKA 152

Query: 122 EYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGC 174
           EY E+MKNK+A IHKEAEEK+A +EA+R EE+LKAEE AAK+RATGT PKK  GC
Sbjct: 153 EYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYRATGTAPKKLFGC 201

[Close]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match: AT3G48940.1 (AT3G48940.1 Remorin family protein)

HSP 1 Score: 161.4 bits (407), Expect = 5.1e-40
Identity = 101/165 (61.21%), Postives = 123/165 (74.55%), Query Frame = 1 

Query: 13  ASVPPPASVEDKE---KALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFI 72
           AS P P S E+K    KA+V V  + +  ED   KK   GS+ RD  L  +E++KR S I
Sbjct: 16  ASEPSPPSKEEKSDDSKAIVLVVAAKEPTED---KKV--GSVHRDAVLVRLEQDKRISLI 75

Query: 73  KAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVA 132
           KAWE++EKSK ENKAQKK+S+V AWENSKKA++EA+LKKIEEQL KKKA Y E+MKNK+A
Sbjct: 76  KAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYTEQMKNKIA 135

Query: 133 IIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
            IHKEAEEK+A  EA+R E++LKAEE AAK+RATGT P K  G F
Sbjct: 136 QIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match: AT4G00670.1 (AT4G00670.1 Remorin family protein)

HSP 1 Score: 87.4 bits (215), Expect = 9.3e-18
Identity = 49/113 (43.36%), Postives = 79/113 (69.91%), Query Frame = 1 

Query: 63  EKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGE 122
           +++   IKAW++ + +K  NK QKKL  +S WE  K   +E++L +I+ +++ KK E  E
Sbjct: 11  DEQSKVIKAWKELKITKVNNKTQKKLLDISGWEKKKTTKIESELARIQRKMDSKKMEKSE 70

Query: 123 KMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKK-FLGCF 175
           K++N+ A +H +A++KKA V+ +R++E+L AEE AA+F+A G IPKK  L CF
Sbjct: 71  KLRNEKAAVHAKAQKKKADVQTRRAQEILDAEEAAARFQAAGKIPKKSSLSCF 123

[Close]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match: gi|659075279|ref|XP_008438060.1| (PREDICTED: uncharacterized protein At3g61260 [Cucumis melo])

HSP 1 Score: 281.6 bits (719), Expect = 9.5e-73
Identity = 161/183 (87.98%), Postives = 166/183 (90.71%), Query Frame = 1 

Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENSDS+PA  PPPASV         EDKEKA+V VP+ NKTKED VPKKASGGSI
Sbjct: 1   MVTAPENSDSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDPVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 175
            LEKKKAEYGEKMKNKVA+IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVALIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match: gi|449432167|ref|XP_004133871.1| (PREDICTED: uncharacterized protein At3g61260-like [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 159/183 (86.89%), Postives = 165/183 (90.16%), Query Frame = 1 

Query: 1   MVAAPENSDSSPASVPPPASV---------EDKEKALVPVPVSNKTKEDSVPKKASGGSI 60
           MV APENS S+PA  PPPASV         EDKEKA+V VP+ NKTKED+VPKKASGGSI
Sbjct: 1   MVTAPENSVSTPAPTPPPASVPAGVPSEAVEDKEKAMVTVPIVNKTKEDTVPKKASGGSI 60

Query: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEE 120
           DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLS+V AWENSKKANLEAKLKKIEE
Sbjct: 61  DRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSSVLAWENSKKANLEAKLKKIEE 120

Query: 121 QLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 175
            LEKKKAEYGEKMKNKV +IHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL
Sbjct: 121 DLEKKKAEYGEKMKNKVVLIHKEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFL 180

[Close]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match: gi|593265720|ref|XP_007135038.1| (hypothetical protein PHAVU_010G096300g [Phaseolus vulgaris])

HSP 1 Score: 208.4 bits (529), Expect = 1.0e-50
Identity = 125/191 (65.45%), Postives = 145/191 (75.92%), Query Frame = 1 

Query: 10  SSPASVPPPASVED-----------KEKALVPVPV---------------SNKTKEDSVP 69
           + PASVP PA+VE            K  A VP PV               S KT  + V 
Sbjct: 8   AEPASVPAPATVEPQLAEALDSASKKATAAVPAPVAAETKALAVVEKEKESEKTPPEPVK 67

Query: 70  KKASGGSIDRDIALAEVEKEKRFSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKKANLE 129
           KKA+GGS+DRDIALAE+EKEKRFS +KAWE+SEKSKAENKAQK LSAV+AWENSKKA LE
Sbjct: 68  KKATGGSLDRDIALAEIEKEKRFSNVKAWEESEKSKAENKAQKHLSAVAAWENSKKAALE 127

Query: 130 AKLKKIEEQLEKKKAEYGEKMKNKVAIIHKEAEEKKATVEAQRSEELLKAEETAAKFRAT 175
           A+L+KIEEQLEKKKAEYGEKMKNK+A++HK+AEEK+ATVEA+R EE+L AEE+AAK+RAT
Sbjct: 128 AQLRKIEEQLEKKKAEYGEKMKNKIALVHKQAEEKRATVEAKRGEEILNAEESAAKYRAT 187

[Close]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match: gi|802695749|ref|XP_012083428.1| (PREDICTED: uncharacterized protein At3g61260-like [Jatropha curcas])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 120/160 (75.00%), Postives = 133/160 (83.12%), Query Frame = 1 

Query: 15  VPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWED 74
           VPPP    D+ KAL  V    +   +S PKK SGGS+DRDIALAEVEKEKR SFIKAWED
Sbjct: 39  VPPPEEKPDESKALAVV----EKIPESAPKKISGGSLDRDIALAEVEKEKRNSFIKAWED 98

Query: 75  SEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIHKE 134
           SEKSKAENKAQKK SAV AWENSKKA LEAKL+KIEEQLEKKKAEY EKMKNK+A++HK+
Sbjct: 99  SEKSKAENKAQKKKSAVEAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKIALVHKQ 158

Query: 135 AEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           AEEK+A VEAQR EE+LKAEE AAK+RATG  P+K LGCF
Sbjct: 159 AEEKRAIVEAQRGEEMLKAEEMAAKYRATGQTPRKLLGCF 194

[Close]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match: gi|255541538|ref|XP_002511833.1| (PREDICTED: remorin [Ricinus communis])

HSP 1 Score: 208.0 bits (528), Expect = 1.3e-50
Identity = 122/162 (75.31%), Postives = 135/162 (83.33%), Query Frame = 1 

Query: 13  ASVPPPASVEDKEKALVPVPVSNKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAW 72
           A+VP P    D  KAL  V    +   +S PKK SGGS+DRDIALAEVEKEKR SFIKAW
Sbjct: 31  ATVPTPEEKPDDSKALAVV----EKVPESGPKKTSGGSLDRDIALAEVEKEKRNSFIKAW 90

Query: 73  EDSEKSKAENKAQKKLSAVSAWENSKKANLEAKLKKIEEQLEKKKAEYGEKMKNKVAIIH 132
           EDSEKSKAENKAQKKLS+V+AWENSKKA LEAKL+KIEEQLEKKKAEY EKMKNKVA++H
Sbjct: 91  EDSEKSKAENKAQKKLSSVTAWENSKKAALEAKLRKIEEQLEKKKAEYAEKMKNKVALVH 150

Query: 133 KEAEEKKATVEAQRSEELLKAEETAAKFRATGTIPKKFLGCF 175
           K+AEEK+A VEAQR EE+LKAEE AAK+RATG  PKK LGCF
Sbjct: 151 KQAEEKRAMVEAQRGEEVLKAEEMAAKYRATGQTPKKLLGCF 188

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g01210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
REMO_ARATH5.8e-4665.12Remorin OS=Arabidopsis thaliana GN=DBP PE=1 SV=1[more]
REMO_SOLTU2.9e-4564.74Remorin OS=Solanum tuberosum PE=1 SV=1[more]
Y3126_ARATH2.9e-4564.15Uncharacterized protein At3g61260 OS=Arabidopsis thaliana GN=At3g61260 PE=1 SV=1[more]
BLAST of Cp4.1LG08g01210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3M0_CUCSA1.3e-7186.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G122490 PE=4 SV=1[more]
T2DM60_PHAVU7.1e-5165.45Remorin family protein OS=Phaseolus vulgaris GN=PHAVU_010G096300g PE=2 SV=1[more]
B9RDP4_RICCO9.3e-5175.31Remorin, putative OS=Ricinus communis GN=RCOM_1614760 PE=4 SV=1[more]
A0A067JXN4_JATCU9.3e-5175.00Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14423 PE=4 SV=1[more]
A0A061DUD4_THECC5.1e-4967.05Remorin family protein OS=Theobroma cacao GN=TCM_005370 PE=4 SV=1[more]
BLAST of Cp4.1LG08g01210 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G45820.13.3e-4765.12 Remorin family protein[more]
AT3G61260.11.6e-4664.15 Remorin family protein[more]
AT5G23750.11.4e-4260.57 Remorin family protein[more]
AT3G48940.15.1e-4061.21 Remorin family protein[more]
AT4G00670.19.3e-1843.36 Remorin family protein[more]
BLAST of Cp4.1LG08g01210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075279|ref|XP_008438060.1|9.5e-7387.98PREDICTED: uncharacterized protein At3g61260 [Cucumis melo][more]
gi|449432167|ref|XP_004133871.1|1.8e-7186.89PREDICTED: uncharacterized protein At3g61260-like [Cucumis sativus][more]
gi|593265720|ref|XP_007135038.1|1.0e-5065.45hypothetical protein PHAVU_010G096300g [Phaseolus vulgaris][more]
gi|802695749|ref|XP_012083428.1|1.3e-5075.00PREDICTED: uncharacterized protein At3g61260-like [Jatropha curcas][more]
gi|255541538|ref|XP_002511833.1|1.3e-5075.31PREDICTED: remorin [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005518Remorin_N
IPR005516Remorin_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005773 vacuole
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g01210.1Cp4.1LG08g01210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 67..169
score: 1.6
IPR005518Remorin, N-terminalPFAMPF03766Remorin_Ncoord: 12..60
score: 2.
NoneNo IPR availableunknownCoilCoilcoord: 92..126
score: -coord: 132..152
scor
NoneNo IPR availablePANTHERPTHR31775FAMILY NOT NAMEDcoord: 15..174
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g01210Cucsa.258280Cucumber (Gy14) v1cgycpeB0688
Cp4.1LG08g01210CmaCh14G020290Cucurbita maxima (Rimu)cmacpeB298
Cp4.1LG08g01210CmaCh06G010200Cucurbita maxima (Rimu)cmacpeB847
Cp4.1LG08g01210CmaCh06G010600Cucurbita maxima (Rimu)cmacpeB854
Cp4.1LG08g01210CmoCh06G010810Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g01210CmoCh14G020910Cucurbita moschata (Rifu)cmocpeB261
Cp4.1LG08g01210Csa3G122490Cucumber (Chinese Long) v2cpecuB852
Cp4.1LG08g01210MELO3C006119Melon (DHL92) v3.5.1cpemeB809
Cp4.1LG08g01210ClCG05G001630Watermelon (Charleston Gray)cpewcgB786
Cp4.1LG08g01210CSPI03G08870Wild cucumber (PI 183967)cpecpiB854
Cp4.1LG08g01210Lsi05G020300Bottle gourd (USVL1VR-Ls)cpelsiB719
Cp4.1LG08g01210MELO3C006119.2Melon (DHL92) v3.6.1cpemedB950
Cp4.1LG08g01210CsaV3_3G009010Cucumber (Chinese Long) v3cpecucB1049
Cp4.1LG08g01210Bhi01G000264Wax gourdcpewgoB1106
Cp4.1LG08g01210CsGy3G008950Cucumber (Gy14) v2cgybcpeB447
Cp4.1LG08g01210Carg21009Silver-seed gourdcarcpeB0692
Cp4.1LG08g01210Carg24637Silver-seed gourdcarcpeB0537
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g01210Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g01210Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g01210Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g01210Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g01210Watermelon (97103) v1cpewmB845
Cp4.1LG08g01210Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g01210Melon (DHL92) v3.6.1cpemedB929
Cp4.1LG08g01210Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g01210Silver-seed gourdcarcpeB0693
Cp4.1LG08g01210Cucumber (Chinese Long) v3cpecucB1071
Cp4.1LG08g01210Cucurbita pepo (Zucchini)cpecpeB254
Cp4.1LG08g01210Cucurbita pepo (Zucchini)cpecpeB482
Cp4.1LG08g01210Cucumber (Gy14) v1cgycpeB0687