Carg21009 (gene) Silver-seed gourd

Overview
NameCarg21009
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRemorin
LocationCucurbita_argyrosperma_scaffold_170 : 316266 .. 319726 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTACGGCGCCGGAAAAATCTGATTCCACTTCTGCTCCTGCTCCTGCTCCTGCTCCAGTTCCGCCGGCTGTGGCGGCTGGAGCTCCAACCGACGCTGTGGAGGATAAGGAAAAAGCTGTGGTTCCAGTGCCTATCATTAATAGTAACCTCTCTTTCTTTCTTTCTCTGGATGTTATCTGTTCGTTGTATGTGTTCTGATTGTTGTTTGGGATTGCGATGATATCGATTTGTTCCTTTCTATCTCATTTCTTTCCTTGATCGGAGATTTTGATGGTGAATGATTTATTACACTATAAAACGTTGAAGTGCTTGATTATACTCTTAGGTGAATTGTAAGATTCTTTATTCTTAGTTGAAGTGCCTTTTCTCGCTCAGTTTGGTCGTCGAGAAATGGATATAGTTTAGTTGAGGAATAAAATTTGTTCAAATTCCGTGTAGGAGAAAGTTTTGCTTACTAGAGTTGCCTTTCTCTCTGATTATAATCAGATCGAGTAGGAGAAGAACAATTGGCAATCCAAGGTTTTCGATGTAATTGGCAGAATGTCAATCGAGCGCTATTTTTCGAAGTAAATCAATTATAGTAACAAAGGAAACGGCAATGATTTTTTTTCTTCTTCTAAAGTTGCAAGTTCTTCAAATTTTTATGTTCCAAGTTTTCGTCTACTAGTAGTTGAAGTGCTTGCTATCTTGGTTAGAGATTGGCAGTGATGTTGATGTCTACAACTTTATTGCAATTCAGATTGAAATGAGCTCCGTATTATGATGATATTCTATCTCGATTATGTTATCATCTTTCTGAAGATGGCGTTGCGTTGGAAAAAGTAAAACGTAAGCTCATTGCCTTCACATTTATGGAAGTTTTGGATGACTACCTGCAATCCTGTATGGGAGAAAATTATCCTCTTAATTCATATGCAGCACATATTATCAAAAAAAATAGTACTGTTATTTGTTCTTACTTTTGTCTTTTGTTCTTAGGTAGCACCTTTTTTGGTTTTTCTCTGTTAAGCTTTTTTTTTTTTTTTTTCCTTTTATTGCCAATTACAGCATAATCTTACTGAGGAAAGTCTCGTTTCACTTTTTTTTTTTTTCTGGATTTCCATGGAGTAAGAGAAATAAGTTTTGGTGCCTCTTGAATAGTTTTCCTCTCACTTTGTTTTGTTAATAGTAAGATTAGCTGTACTGGGCCCATTGACGTTTTATTATTCTTTGATTTTAACGACCATTCCTTAATTTATGCTTCAATATGCTTAAAGTTGTAGATAAATTGAAGATCATGCTTTAGCTTTTGATTATTTGCTTCCTTTATCGGTGTAAAGGAAGATATTTTTCAAAAAGAAGCTATAAATATATACTATAGCTTTTTCTTTGTATGATTATGATTAATAATCAAATAGCTGTTCGGGTAAGGTGGAATCAAGATCTTTGTCCTTATGTATACTTTTAAAGATGCTAATGATGCATTACTGTGTCTGTCGTCCTCTTGAAGAAAGACATTTCGACGCTGTCCTTTATGTCATTTGATTCTTTTTTTCAATAAAACTGGTCAAGAGTTTTATTAAATTTATTTAAGTTGCAACTTACTGAAATTCTACTTTATGGGTTTCATTTTCCATCAGTCATCTATGTTCGTTAACTTCTCATCCATTTAATTTCCTTGGTGAATAATGAATATTGATAAGGTGATAGGATTCAGGTGGGTCATATTGATCCTCTCAACTGTCAATGGAAGTTTCTCTCTGGCTCTTCATTTGTCATCAATGCATACATGTCGTTATTATCAATTCACCGTGAATGAACACTCGATAAGGGTTGGAAATCTTTCGAAATTGTGGAGCCAACTTTACATGAGAAGGAGAGTAGGGGGAAAAACAAAAGTGATTTATCCCATCACATCTTGGTTGTCATTTGAGCAAACTCTGTCAATGTTTCTCCCTGAACCCTCTAAGTTCATATAGCATTGCCCTTTGTCCCACCTTGATGACTTTCCCTTCCAACTTGTATTATAACTCTGTGTGATTTCCTTCTGAGTTTAATGGCTTTACATTGTTTGATACTGTTACCTTTATTGCATTAACCAGCCCGAAAACTTTAGCAATGAGTGTTCTATAATTTAACTTATTTTTCCCTCTAATTTCGGATCTTAACAGAAACCAAAGAAGAACCTGTAACAAAGAAGGCTTCCAGTGGGTCTATTGACAGGGGTGAGCGTACAGCACGAATCTTACTTATTCTATATCTTATAATTTTAAAACAACAGTAAAACATTTCAAAACCTGACCTGATCCTCAATCTTTTTACTTAGATATTGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTCTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGTAAGGCTCAGTTTCCACTATGATTGTCTCGTAATTGTCATTTGTTAAAAAAGACCAGCAGCTTTCCTTGCTCTAAATTCCAAGTTCAAAAACTACAACTCTCTACAATGGTATGATATTGTCTGCCTTGAGCATAAGCTCTCGTGGCTTTACCTTTTAGTTTCTCCAAAAGACCTCATACCGATGGAGATAGTGCTCCTTACTTATAAACTCATGATCTTCCTCTTAATTAGTGAACATGGGACTACTCCTTTAAATAATCCACAACAATACAATTACTATTGTGTGTATTCATGTCTGCAATGAATTATGACAGAAATAATTGTGTAATGGCTATTTAATAGGGCACAAAAGAAGCTCTCTGCTGTATCTGCATGGGAGAACAGCAAAAGAGCCAACCTGGAAGCCAAATTGAAAAATATTGAGGTAACCATTTATCCTTTTTCCTGTTCTTGGCGTTTAACAAATAATTTTATTTGGAAATTCTGCTGCCTGCTCGATCTGGGATCGGCACGAGCAAATGGTGAAGGCAACGGGTTTTGATCGAGCAGCGATTGATACGGGGTTGAGTGCTGCTATAGATTTGAAATTTTCCTTTTAACGAGATGGAAAATTACAGGAACAATTGGAGAAGAAAAAGGGTGAATACGGAGAAAAAATGAAAAACAAAGTAGCTTTGATTCACAAAGAAGCAGAGGAAAAAAAGGCAATGGTGGAAGCACAACGTTCAGAGGAACTGCTGAAGGCGGAGGAGACGGCTGCCAAATTCCGGGCAACTGGAACCGTCCCAAAGAAATTTTTGGGATGCTTTTGAAAGTTTTATATGATCATCTCTTTATTTCTTCTTATTATTATTATTAGAATGTGTCTTTTTCCTGTCTTTGTTTGTAAATCTTCGTGGTTGCCTGTGAATGCTTCTTCTTCCGTAACTCTCTATTATTTTTCTTCTGCTTTTGGCATTTTCTGTGTGTTGTTGTTCGTCTCTTCCTTCAAGTTCGATGTACAAAATAAAACTTTTTTTAAAAAAATAAAAATTAATAAATTACATTTTGTTCTGAAACTTTT

mRNA sequence

ATGTCTACGGCGCCGGAAAAATCTGATTCCACTTCTGCTCCTGCTCCTGCTCCTGCTCCAGTTCCGCCGGCTGTGGCGGCTGGAGCTCCAACCGACGCTGTGGAGGATAAGGAAAAAGCTGTGGTTCCAGTGCCTATCATTAATAAAACCAAAGAAGAACCTGTAACAAAGAAGGCTTCCAGTGGGTCTATTGACAGGGATATTGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTCTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAAAAGAAGCTCTCTGCTGTATCTGCATGGGAGAACAGCAAAAGAGCCAACCTGGAAGCCAAATTGAAAAATATTGAGGAACAATTGGAGAAGAAAAAGGGTGAATACGGAGAAAAAATGAAAAACAAAGTAGCTTTGATTCACAAAGAAGCAGAGGAAAAAAAGGCAATGGTGGAAGCACAACGTTCAGAGGAACTGCTGAAGGCGGAGGAGACGGCTGCCAAATTCCGGGCAACTGGAACCGTCCCAAAGAAATTTTTGGGATGCTTTTGAAAGTTTTATATGATCATCTCTTTATTTCTTCTTATTATTATTATTAGAATGTGTCTTTTTCCTGTCTTTGTTTGTAAATCTTCGTGGTTGCCTGTGAATGCTTCTTCTTCCGTAACTCTCTATTATTTTTCTTCTGCTTTTGGCATTTTCTGTGTGTTGTTGTTCGTCTCTTCCTTCAAGTTCGATGTACAAAATAAAACTTTTTTTAAAAAAATAAAAATTAATAAATTACATTTTGTTCTGAAACTTTT

Coding sequence (CDS)

ATGTCTACGGCGCCGGAAAAATCTGATTCCACTTCTGCTCCTGCTCCTGCTCCTGCTCCAGTTCCGCCGGCTGTGGCGGCTGGAGCTCCAACCGACGCTGTGGAGGATAAGGAAAAAGCTGTGGTTCCAGTGCCTATCATTAATAAAACCAAAGAAGAACCTGTAACAAAGAAGGCTTCCAGTGGGTCTATTGACAGGGATATTGCTCTTGCGGAGGTTGAAAAGGAGAAAAGGTCTTCCTTCATCAAGGCCTGGGAAGATAGTGAAAAATCAAAGGCTGAGAACAAGGCACAAAAGAAGCTCTCTGCTGTATCTGCATGGGAGAACAGCAAAAGAGCCAACCTGGAAGCCAAATTGAAAAATATTGAGGAACAATTGGAGAAGAAAAAGGGTGAATACGGAGAAAAAATGAAAAACAAAGTAGCTTTGATTCACAAAGAAGCAGAGGAAAAAAAGGCAATGGTGGAAGCACAACGTTCAGAGGAACTGCTGAAGGCGGAGGAGACGGCTGCCAAATTCCGGGCAACTGGAACCGTCCCAAAGAAATTTTTGGGATGCTTTTGA

Protein sequence

MSTAPEKSDSTSAPAPAPAPVPPAVAAGAPTDAVEDKEKAVVPVPIINKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSEKSKAENKAQKKLSAVSAWENSKRANLEAKLKNIEEQLEKKKGEYGEKMKNKVALIHKEAEEKKAMVEAQRSEELLKAEETAAKFRATGTVPKKFLGCF
Homology
[Close]
BLAST of Carg21009 vs. NCBI nr
Match: XP_022980396.1 (uncharacterized protein At3g61260-like [Cucurbita maxima])

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-23
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE
Sbjct: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGTVPKKFLGCF
Sbjct: 168 ETAAKFRATGTVPKKFLGCF 187

[Close]
BLAST of Carg21009 vs. NCBI nr
Match: XP_023528956.1 (uncharacterized protein At3g61260-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 117.1 bits (292), Expect = 6.5e-23
Identity = 137/140 (97.86%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKEEPVTKKAS GSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 56  NKTKEEPVTKKASGGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 115

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VEAQRSEELLKAE
Sbjct: 116 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMVEAQRSEELLKAE 175

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGTVPKKFLGCF
Sbjct: 176 ETAAKFRATGTVPKKFLGCF 195

[Close]
BLAST of Carg21009 vs. NCBI nr
Match: XP_022924537.1 (uncharacterized protein At3g61260-like [Cucurbita moschata])

HSP 1 Score: 116.7 bits (291), Expect = 8.5e-23
Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE
Sbjct: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGTVPK FLGCF
Sbjct: 168 ETAAKFRATGTVPKNFLGCF 187

[Close]
BLAST of Carg21009 vs. NCBI nr
Match: XP_022974600.1 (remorin [Cucurbita maxima] >XP_022974657.1 remorin-like [Cucurbita maxima])

HSP 1 Score: 101.7 bits (252), Expect = 2.8e-18
Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKE+ V KKAS GSIDRDIALAEVEKEKR SFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 35  NKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDSXXXXXXXXXXXXXXXXXXX 94

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   QRSEELLKAE
Sbjct: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSEELLKAE 154

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGT+PKKFLGCF
Sbjct: 155 ETAAKFRATGTIPKKFLGCF 174

[Close]
BLAST of Carg21009 vs. NCBI nr
Match: XP_022933402.1 (remorin [Cucurbita moschata])

HSP 1 Score: 90.5 bits (223), Expect = 6.5e-15
Identity = 126/140 (90.00%), Postives = 128/140 (91.43%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKE+ V KKAS GSIDRDIALAEVEKEKR SFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 35  NKTKEDSVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDSXXXXXXXXXXXXXXXXXXX 94

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        LLKAE
Sbjct: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKAE 154

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGT+PKKFLGCF
Sbjct: 155 ETAAKFRATGTIPKKFLGCF 174

[Close]
BLAST of Carg21009 vs. TAIR10
Match: AT3G61260.1 (Remorin family protein)

HSP 1 Score: 57.8 bits (138), Expect = 8.5e-09
Identity = 104/139 (74.82%), Postives = 114/139 (82.01%), Query Frame = 0 

Query: 49  KTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXX 108
           K  EEP   K +S S+DRD+ LA++ KEKR SF++AWE+S   XXXXXXXXXXXXXXXXX
Sbjct: 74  KPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSXXXXXXXXXXXXXXXXX 133

Query: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEE 168
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +LKAEE
Sbjct: 134 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKAEE 193

Query: 169 TAAKFRATGTVPKKFLGCF 188
           TAAK+RATG VPK   GCF
Sbjct: 194 TAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Carg21009 vs. TAIR10
Match: AT2G45820.1 (Remorin family protein)

HSP 1 Score: 55.8 bits (133), Expect = 3.2e-08
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 49 KTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDS 89
          K  EE   KKASSGS DRD+ LA++EKEK++SFIKAWE+S
Sbjct: 52 KPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEES 91

[Close]
BLAST of Carg21009 vs. TAIR10
Match: AT3G48940.1 (Remorin family protein)

HSP 1 Score: 49.3 bits (116), Expect = 3.0e-06
Identity = 95/132 (71.97%), Postives = 106/132 (80.30%), Query Frame = 0 

Query: 56  TKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXXXXXXX 115
           T+    GS+ RD  L  +E++KR S IKAWE++       XXXXXXXXXXXXXXXXXXXX
Sbjct: 44  TEDKKVGSVHRDAVLVRLEQDKRISLIKAWEEAEKSKVENXXXXXXXXXXXXXXXXXXXX 103

Query: 116 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETAAKFRA 175
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EA+R E++LKAEE AAK+RA
Sbjct: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKRGEDVLKAEEMAAKYRA 163

Query: 176 TGTVPKKFLGCF 188
           TGT P K  G F
Sbjct: 164 TGTAPTKLFGFF 175

[Close]
BLAST of Carg21009 vs. Swiss-Prot
Match: sp|Q9M2D8|Y3126_ARATH (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.5e-07
Identity = 104/139 (74.82%), Postives = 114/139 (82.01%), Query Frame = 0 

Query: 49  KTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXX 108
           K  EEP   K +S S+DRD+ LA++ KEKR SF++AWE+S   XXXXXXXXXXXXXXXXX
Sbjct: 74  KPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSXXXXXXXXXXXXXXXXX 133

Query: 109 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEE 168
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        +LKAEE
Sbjct: 134 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKAEE 193

Query: 169 TAAKFRATGTVPKKFLGCF 188
           TAAK+RATG VPK   GCF
Sbjct: 194 TAAKYRATGIVPKATCGCF 212

[Close]
BLAST of Carg21009 vs. Swiss-Prot
Match: sp|O80837|REMO_ARATH (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 5.8e-07
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0 

Query: 49 KTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDS 89
          K  EE   KKASSGS DRD+ LA++EKEK++SFIKAWE+S
Sbjct: 52 KPIEEHTPKKASSGSADRDVILADLEKEKKTSFIKAWEES 91

[Close]
BLAST of Carg21009 vs. Swiss-Prot
Match: sp|P93788|REMO_SOLTU (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 103/126 (81.75%), Postives = 106/126 (84.13%), Query Frame = 0 

Query: 62  GSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 121
           GSIDRD  LA V  EKR S IKAWE+S    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 73  GSIDRDAVLARVATEKRVSLIKAWEESEKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 132

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETAAKFRATGTVPK 181
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    R E+LLKAEE AAK+RATGT PK
Sbjct: 133 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEDLLKAEELAAKYRATGTAPK 192

Query: 182 KFLGCF 188
           K LG F
Sbjct: 193 KILGIF 198

[Close]
BLAST of Carg21009 vs. TrEMBL
Match: tr|A0A1S3AV45|A0A1S3AV45_CUCME (uncharacterized protein At3g61260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483282 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.3e-15
Identity = 125/140 (89.29%), Postives = 127/140 (90.71%), Query Frame = 0 

Query: 48  NKTKEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXX 107
           NKTKE+PV KKAS GSIDRDIALAEVEKEKR SFIKAWEDSXXXXXXXXXXXXXXXXXXX
Sbjct: 44  NKTKEDPVPKKASGGSIDRDIALAEVEKEKRFSFIKAWEDSXXXXXXXXXXXXXXXXXXX 103

Query: 108 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAE 167
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          KAE
Sbjct: 104 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAE 163

Query: 168 ETAAKFRATGTVPKKFLGCF 188
           ETAAKFRATGT+PKKFLGCF
Sbjct: 164 ETAAKFRATGTIPKKFLGCF 183

[Close]
BLAST of Carg21009 vs. TrEMBL
Match: tr|A0A2P4HL06|A0A2P4HL06_QUESU (Remorin OS=Quercus suber OX=58331 GN=CFP56_38375 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.3e-15
Identity = 117/135 (86.67%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 53  EPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXXXX 112
           EPV KK S GSIDRD+ALA+VEKEKR SF+KAWE+S    XXXXXXXXXXXXXXXXXXXX
Sbjct: 59  EPVVKKDSKGSIDRDVALADVEKEKRLSFVKAWEESEKSKXXXXXXXXXXXXXXXXXXXX 118

Query: 113 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETAAK 172
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EA+R EELLKAEET+AK
Sbjct: 119 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARRGEELLKAEETSAK 178

Query: 173 FRATGTVPKKFLGCF 188
           +RATGT+PKKFLGCF
Sbjct: 179 YRATGTIPKKFLGCF 193

[Close]
BLAST of Carg21009 vs. TrEMBL
Match: tr|B9I8G8|B9I8G8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G081300v3 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 4.0e-13
Identity = 86/137 (62.77%), Postives = 90/137 (65.69%), Query Frame = 0 

Query: 51  KEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXX 110
           K EP  KK S GSIDRDIALA++EKEKR SFIKAWEDS  XXXXXXXXXXXXXXXXXXXX
Sbjct: 57  KTEPAPKKISGGSIDRDIALADLEKEKRLSFIKAWEDSEKXXXXXXXXXXXXXXXXXXXX 116

Query: 111 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETA 170
           XXXXXXXXXXX                                 VEA+R EE LKAEE A
Sbjct: 117 XXXXXXXXXXXMEEKLEKQKAEYAEKMKNKVALIHKDAEEQRAMVEAKRGEEFLKAEEMA 176

Query: 171 AKFRATGTVPKKFLGCF 188
           AK+RATG  PKK LGCF
Sbjct: 177 AKYRATGQTPKKLLGCF 193

[Close]
BLAST of Carg21009 vs. TrEMBL
Match: tr|G0Z815|G0Z815_9ROSA (Remorin OS=Pyrus x bretschneideri OX=225117 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.6e-12
Identity = 115/135 (85.19%), Postives = 125/135 (92.59%), Query Frame = 0 

Query: 53  EPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXXXX 112
           E V KKAS GSIDRDIALA++EKEK  SF++AWE+S  XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 64  ETVEKKASGGSIDRDIALAQLEKEKSMSFVRAWEESEKXXXXXXXXXXXXXXXXXXXXXX 123

Query: 113 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETAAK 172
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  AQ+ EELLKA+ETAAK
Sbjct: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKGEELLKADETAAK 183

Query: 173 FRATGTVPKKFLGCF 188
           +RATG++PKKFLGCF
Sbjct: 184 YRATGSIPKKFLGCF 198

[Close]
BLAST of Carg21009 vs. TrEMBL
Match: tr|A0A1S3XUN0|A0A1S3XUN0_TOBAC (remorin-like OS=Nicotiana tabacum OX=4097 GN=LOC107768994 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.4e-12
Identity = 106/137 (77.37%), Postives = 122/137 (89.05%), Query Frame = 0 

Query: 51  KEEPVTKKASSGSIDRDIALAEVEKEKRSSFIKAWEDSXXXXXXXXXXXXXXXXXXXXXX 110
           K +P++K++S GS+DRD+ALA++E EKRSSF+KAWE+S       XXXXXXXXXXXXXXX
Sbjct: 65  KTDPLSKRSSKGSLDRDVALAQLETEKRSSFVKAWEESEKSKVDNXXXXXXXXXXXXXXX 124

Query: 111 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEAQRSEELLKAEETA 170
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V+A+R +E+LKAEE A
Sbjct: 125 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMVDARRGKEILKAEEMA 184

Query: 171 AKFRATGTVPKKFLGCF 188
           AK+RATG  PKKFLGCF
Sbjct: 185 AKYRATGQTPKKFLGCF 201

The following BLAST results are available for this feature:
BLAST of Carg21009 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022980396.12.2e-23100.00uncharacterized protein At3g61260-like [Cucurbita maxima][more]
XP_023528956.16.5e-2397.86uncharacterized protein At3g61260-like [Cucurbita pepo subsp. pepo][more]
XP_022924537.18.5e-2399.29uncharacterized protein At3g61260-like [Cucurbita moschata][more]
XP_022974600.12.8e-1893.57remorin [Cucurbita maxima] >XP_022974657.1 remorin-like [Cucurbita maxima][more]
XP_022933402.16.5e-1590.00remorin [Cucurbita moschata][more]
BLAST of Carg21009 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G61260.18.5e-0974.82Remorin family protein[more]
AT2G45820.13.2e-0867.50Remorin family protein[more]
AT3G48940.13.0e-0671.97Remorin family protein[more]
BLAST of Carg21009 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M2D8|Y3126_ARATH1.5e-0774.82Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P... [more]
sp|O80837|REMO_ARATH5.8e-0767.50Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1[more]
sp|P93788|REMO_SOLTU1.3e-0681.75Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1[more]
BLAST of Carg21009 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AV45|A0A1S3AV45_CUCME7.3e-1589.29uncharacterized protein At3g61260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
tr|A0A2P4HL06|A0A2P4HL06_QUESU7.3e-1586.67Remorin OS=Quercus suber OX=58331 GN=CFP56_38375 PE=4 SV=1[more]
tr|B9I8G8|B9I8G8_POPTR4.0e-1362.77Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G081300v3 PE=... [more]
tr|G0Z815|G0Z815_9ROSA2.6e-1285.19Remorin OS=Pyrus x bretschneideri OX=225117 PE=2 SV=1[more]
tr|A0A1S3XUN0|A0A1S3XUN0_TOBAC3.4e-1277.37remorin-like OS=Nicotiana tabacum OX=4097 GN=LOC107768994 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005518Remorin_N
IPR005516Remorin_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21009-RACarg21009-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 105..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availablePANTHERPTHR31775FAMILY NOT NAMEDcoord: 49..187
NoneNo IPR availablePANTHERPTHR31775:SF2REMORINcoord: 49..187
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 77..182
e-value: 4.2E-32
score: 110.2
IPR005518Remorin, N-terminalPFAMPF03766Remorin_Ncoord: 17..73
e-value: 2.4E-5
score: 24.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg21009Cla006181Watermelon (97103) v1carwmB0488
Carg21009Csa3G122490Cucumber (Chinese Long) v2carcuB0522
Carg21009MELO3C006119Melon (DHL92) v3.5.1carmeB0497
Carg21009MELO3C006904Melon (DHL92) v3.5.1carmeB0498
Carg21009ClCG05G008030Watermelon (Charleston Gray)carwcgB0475
Carg21009ClCG05G001630Watermelon (Charleston Gray)carwcgB0474
Carg21009CSPI03G08870Wild cucumber (PI 183967)carcpiB0529
Carg21009Cucsa.258280Cucumber (Gy14) v1carcgyB0564
Carg21009CmaCh14G020290Cucurbita maxima (Rimu)carcmaB0683
Carg21009CmaCh06G010600Cucurbita maxima (Rimu)carcmaB0684
Carg21009CmoCh06G010810Cucurbita moschata (Rifu)carcmoB0666
Carg21009CmoCh14G020910Cucurbita moschata (Rifu)carcmoB0664
Carg21009Lsi05G020300Bottle gourd (USVL1VR-Ls)carlsiB445
Carg21009Cp4.1LG08g01210Cucurbita pepo (Zucchini)carcpeB0692
Carg21009CsGy3G008950Cucumber (Gy14) v2carcgybB0499
Carg21009MELO3C006119.2Melon (DHL92) v3.6.1carmedB0503
Carg21009CsaV3_3G009010Cucumber (Chinese Long) v3carcucB0528
Carg21009Cla97C05G082020Watermelon (97103) v2carwmbB0513
Carg21009Bhi01G000264Wax gourdcarwgoB0594
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg21009Carg24637Silver-seed gourdcarcarB409
The following block(s) are covering this gene:
GeneOrganismBlock
Carg21009Cucurbita moschata (Rifu)carcmoB0665
Carg21009Cucurbita pepo (Zucchini)carcpeB0691
Carg21009Cucurbita pepo (Zucchini)carcpeB0693
Carg21009Watermelon (97103) v1carwmB0487