Cp4.1LG08g01120 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g01120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Protein CURVATURE THYLAKOID 1A, chloroplastic
Location	Cp4.1LG08 : 3756277 .. 3760778 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATTTTAGATAGGGAACTAACCAATCACAACGAAGGGTGTGTCCACGTGTCGGTACCAGAGGCCATCTTCCCAAACTGTGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGCGAATCCAAAAAGAAAATCTCTGCAAACACGAGGGATCGAAAAGTCGTTAGAAGCGGCAACTCCTCGACGGCCATTTGATTGGGGATTCCTCTCTCTTTCCGGCGTCGATTCTCAAGTTTGATTGAACTATCTGCAAAGAAATGGCAGCCACGGCCTCTCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCACCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGGTAACTTTCTCGTAAAATCCTATTAATTTTCTTTTGGGCAATTCGTCGAACACATTGTGTGCAAGATGAAATTCTCGGTCTGTTTTAATTTCTGATGTTTTCGTTTCTCTTTGGGTATCTTCTTAGTTGGGTCTTGACTTTTGGAGCTTGGTTGTGTGTGTATCATTCGATTCATGAAGATAATTTGTCCCCGTGATTTGAGCCTGAACTTTTTTTAGTTTTATAGTTCATTCAATTCTGGCAACTCAACTGCTACACGATTGAGTGCGTTAAGTTTGCTGGTAATCCTGCATTATGAAAAAGTGGATTAAGGTGCTGTGATTTACATTCAAGACCTTACACGTGAATTTTTCAAACCAATTTCACACATCATACATCTATAAACTATGCTTACTTTCAAGAGAAGCCTTGTGAATCTGTGAATTTAGAATATGAGTTTTGATGGGCAAATGCATAGGTTTATGCTTCCATTAAATATTAAATATCTTAGATTTGTATAGCTTATGGAACTTCAGTTTTAGAGAAGATATGTAATAGCCCAAGCCCATCGCTAGTAGATATTGTCCGTTTTAACTGATTATGTATCGCCGTCAGCCTCACGATTTGAAGCGCGTTTACTAGGGAGAGGTTTCCACACCCTATAAGAAATGCTTCATTCCCCTCTCTAACCAATGTAGGTTCTCACAATCCACCTCCTTGGGGTCTAGCATCCTCATTGGCACACCGCCCGGTGTCTGGCTCTGATACCATTTGTAATAGTCCATGCCCAATGTTAGTAGATATTGTCTACTGTGTCCCGTTACGTATCGTCGTTAGCCTCACGATTTTAAAACGCGTCTACTAGAGAGAGATTTCTACACCCTTATAAGGAATGTTTTGTTCCCCTCTCCACCCAATGTGAGATCTCACAAGATATGTTCTATGGACTTCAAGGAAATCAGAGAAAACTTCATAATTGGCAGCCTGCCCCCATCTCATAGAAAATTGTTGGAAATGAGGTCTGTAGTTTAAGAACATGGTTCACTTTTTGTGTGATAAAAATTGTCGTTTTCGTTCATTGCTATTTTTGAATTGTGACTGAAATGTTAGTTTCTTGATTTAGACCCATTTAGATTCAAATGGGATTTTCCCAACTTACCATTTGGTGACAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGGTATTATTATTCTTCATCATTCATTTTATGGTCTTTTTTGTTTCTTATACTAATGTCATATTGTTTACTAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGGTAAATGATTCCATCAAGCTCATGCTTCTGCTTAAGTATTTATATTTCCAATTTGTTTCTTCCCCTTCTAAGCCCATTTGACACTCAATCTCCATCTATTCTCACCAGCTTCCGAAGATCCTGGAGTTGGTAGGACTTGGATATACAGGGTGGTTCGTGTACCGATATCTACTCTTCAAGGTAAGTAGAGAAAATAATTAAAACCTGTTTCAAACAAGATTTGTTGAGAATGGTTGGAGGAGGAATCCCATTGGCTAATTAGATTTATAAGTAAGGAATAAATCTTTATTGCTATGAGGTATTTTGGGGAAACTAAAAGTAAAACAATGAGAGCTTATGCTCAAAGTAGACAATATTATACTATTGTGGAGGTCCGTGATTTACAACAAAGTCTGCATTATGTCATCATTTTAATGTTTGATGCTTTCTCAAGCTTCACCCTTGATGAGATTTTGCTATGGTTTCTAAGTTTTGTTCGAGATTAAAACGTTTCTTGTCACATGTTTCTAAAGAGATTGTCTAATCTGATCCAAAACATAATTGGATGGAAATGCCAAATAGAATCTGAGAGTTCTAAGAAACCATAGAAATGTAATCATAGCTCTTGGTTGGTTCTGCAACTGGATATTGACTTCAAGAATGTTGTTTGTTTCTTCTTGCTTCCTCAGTCTAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAAGATGCGCGTCATTGGGCACCGTGTTTCGACATGCTTGGTTCCTCTTATGAATCATCATTTTGTACTCTATTCCACTTAGTTTGTAAGAGGCAATATGCCCCCTTTTCTTTGTATCTGTATGATAAGATTTGTCAAGTTCAGTAAATGGAAACAATCCCTTTTTTCTCAAAACTTATTTCTTGCTTCAGAAAAAGAAAATGGTGAAATTCATTGAAAATGGAGCCTGAGTGGAGTCAACTGGTTGACCACATATGAACCCTGCACATAACATCCCTTTGTTCTGTGTGATCCTGGTCCAAACCAATTTCGATAAGGTACACAAACATATATAGAATACTCACTCACATGTCTCCCCATGAACAAACATATATAGAATACTCACTCACATGTCTCCCCATGAACAATTTAGATAAATCGTTTGTGACAATTATAAATAAGAAAATATGCTAGACTAGCAACTTTTCTTGTTTGGAAGGTTACTATTATTGAATCATGACCAAATTTGTGCATTAAAAATAAAATCTTCAAAGCAATACCACAACAAATTGAATAACGTGATAAAAAATAATTTTTCTAATCCTTCTACATTAACCCACTTAACTTAACCAGTATTCTTCAAGAAACAGTTTTCAGAAACACGAAATGAAAACAAAATCTTTATGGGACACTTCTTAATCAATCTTCTTCTAGAAAACAGTGCTCAGAGACTCATGAACTTCCATGACATAGTAATTATTACCCAACTTTGGCAGTGACAGTTCTCATAGAAACAGAACAGTCAAATTTCTATGGCTACCAAAAAGATCTCAAAGATTTAGGATACCAGAATTTCAGGTTGCAAATGTTGATGATAAGTAGTATCGAGAAGGAAAGTAAAGCAATATCCAGAGAGATTTTAGTATAACATAATTGAGATTCAAGTATTAGCAATAGAACAGTTTTACTATCACATCATCTTCTTTGAATCGAGGGAGGGATGTCAAAAGGGGAGCCAAGAAAAAAAAACAAGAAAAAAGAAAAAAAAAGACGTACAAAAAATTAGATGGTTAGACAACCTACACAAGATATAGTTGGATAATACCTTTCGATCCTTTAGATACAGAACAGAACAGAACGTGGTCGTGGTCGGGGTCGGTCAGGGCCTGATGGTAAGTTCAGCTCTAAGATGGAGGACTCCATTTATGAAGTATAGACTATCTTCGGCCATGAAAGAAGTCCATGGTATTGCAAACAAGTTTCTATAGCCAACAGCCTTGCCTCCCGTGAATGTGTAATTGCCCTTATATTTGCTAACGAACTCCTCTGTAGGCTTTGATCTTGCAGCAAATTCATAGTCTACTGCAAAAGATACTGATCCTTTTTCCTGCATTCCCAAGAAAAGCCCAAAACAATGAAATGAGCTCTGCTGGTCCATGTTGCAATGAGCTGAAAGGAAAAATCCTTGTCCACCCAAGTGGAATGCCTGAGAATACACTCTCCCAGACGGAAACAAATTTGTACATTCTTCCCGCTTTAGGTCCAGGTATACTACACACTGCTGCCGAGGGCAATCAAACTCAACAACCTTGACTGGACGGTATTTGTATGCTCTCTCAATAAAGAATCGGCGGTTTGAGGAAGCCGACTCATCCGCAGCTATGATTCTCTGCCGGTGAGGGGCCTCCGCCTTGAAGAAAAGGGCCTCAAGCACAAGTTTGCAAGCAACCTCATGGTCGAAGTCATTGCAGGTCAGAACTTTCTTAAGCTTTCGACAAGTCATAAAGGGGAATCGAATATAACGTGCAAGTCTGGCCCCCAGCACTTCTCGCCTCTCCTCCAACCTTGAATACTGAGCTCTAGCCCACTTCAAGATGAAATCGTATACTGCATCCTCTGATGCAACCTGTAGATCGTCACTACACAATATTGCCTCCACTCCTGCAAGAGGCAA

mRNA sequence

AGGATTTTAGATAGGGAACTAACCAATCACAACGAAGGGTGTGTCCACGTGTCGGTACCAGAGGCCATCTTCCCAAACTGTGATCGCGGATAAACAAGCCATTTCTGAGCATAGAAAATGGCGAATCCAAAAAGAAAATCTCTGCAAACACGAGGGATCGAAAAGTCGTTAGAAGCGGCAACTCCTCGACGGCCATTTGATTGGGGATTCCTCTCTCTTTCCGGCGTCGATTCTCAAGTTTGATTGAACTATCTGCAAAGAAATGGCAGCCACGGCCTCTCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCACCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGTCTAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAAGATGCGCGTCATTGGGCACCGTGTTTCGACATGCTTGGTTCCTCTTATGAATCATCATTTTGTACTCTATTCCACTTAGTTTGTAAGAGGCAATATGCCCCCTTTTCTTTGTATCTGTATGATAAGATTTGTCAAGTTCAGTAAATGGAAACAATCCCTTTTTTCTCAAAACTTATTTCTTGCTTCAGAAAAAGAAAATGGTGAAATTCATTGAAAATGGAGCCTGAGTGGAGTCAACTGGTTGACCACATATGAACCCTGCACATAACATCCCTTTGTTCTGTGTGATCCTGGTCCAAACCAATTTCGATAAGGTACACAAACATATATAGAATACTCACTCACATGTCTCCCCATGAACAAACATATATAGAATACTCACTCACATGTCTCCCCATGAACAATTTAGATAAATCGTTTGTGACAATTATAAATAAGAAAATATGCTAGACTAGCAACTTTTCTTGTTTGGAAGGTTACTATTATTGAATCATGACCAAATTTGTGCATTAAAAATAAAATCTTCAAAGCAATACCACAACAAATTGAATAACGTGATAAAAAATAATTTTTCTAATCCTTCTACATTAACCCACTTAACTTAACCAGTATTCTTCAAGAAACAGTTTTCAGAAACACGAAATGAAAACAAAATCTTTATGGGACACTTCTTAATCAATCTTCTTCTAGAAAACAGTGCTCAGAGACTCATGAACTTCCATGACATAGTAATTATTACCCAACTTTGGCAGTGACAGTTCTCATAGAAACAGAACAGTCAAATTTCTATGGCTACCAAAAAGATCTCAAAGATTTAGGATACCAGAATTTCAGGTTGCAAATGTTGATGATAAGTAGTATCGAGAAGGAAAGTAAAGCAATATCCAGAGAGATTTTAGTATAACATAATTGAGATTCAAGTATTAGCAATAGAACAGTTTTACTATCACATCATCTTCTTTGAATCGAGGGAGGGATGTCAAAAGGGGAGCCAAGAAAAAAAAACAAGAAAAAAGAAAAAAAAAGACGTACAAAAAATTAGATGGTTAGACAACCTACACAAGATATAGTTGGATAATACCTTTCGATCCTTTAGATACAGAACAGAACAGAACGTGGTCGTGGTCGGGGTCGGTCAGGGCCTGATGGTAAGTTCAGCTCTAAGATGGAGGACTCCATTTATGAAGTATAGACTATCTTCGGCCATGAAAGAAGTCCATGGTATTGCAAACAAGTTTCTATAGCCAACAGCCTTGCCTCCCGTGAATGTGTAATTGCCCTTATATTTGCTAACGAACTCCTCTGTAGGCTTTGATCTTGCAGCAAATTCATAGTCTACTGCAAAAGATACTGATCCTTTTTCCTGCATTCCCAAGAAAAGCCCAAAACAATGAAATGAGCTCTGCTGGTCCATGTTGCAATGAGCTGAAAGGAAAAATCCTTGTCCACCCAAGTGGAATGCCTGAGAATACACTCTCCCAGACGGAAACAAATTTGTACATTCTTCCCGCTTTAGGTCCAGGTATACTACACACTGCTGCCGAGGGCAATCAAACTCAACAACCTTGACTGGACGGTATTTGTATGCTCTCTCAATAAAGAATCGGCGGTTTGAGGAAGCCGACTCATCCGCAGCTATGATTCTCTGCCGGTGAGGGGCCTCCGCCTTGAAGAAAAGGGCCTCAAGCACAAGTTTGCAAGCAACCTCATGGTCGAAGTCATTGCAGGTCAGAACTTTCTTAAGCTTTCGACAAGTCATAAAGGGGAATCGAATATAACGTGCAAGTCTGGCCCCCAGCACTTCTCGCCTCTCCTCCAACCTTGAATACTGAGCTCTAGCCCACTTCAAGATGAAATCGTATACTGCATCCTCTGATGCAACCTGTAGATCGTCACTACACAATATTGCCTCCACTCCTGCAAGAGGCAA

Coding sequence (CDS)

ATGGCAGCCACGGCCTCTCCCACAGCGGCCACCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCACCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGTCTAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAA

Protein sequence

MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLSSRKELADDIEALKKKIAGAE

Homology

[Close]

BLAST of Cp4.1LG08g01120 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-28
Identity = 89/166 (53.61%), Postives = 111/166 (66.87%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPR-LGSPSFPTSLKISLES--RRSSLL 60
           MA + + +++ AV+ P + A   TR SA+P LPPR  G  SF   LK+   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVP 120
           +TRASS EE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGA+NSVP
Sbjct: 61  KTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 L------------------------SSRKELADDIEALKKKIAGAE 140
           L                        SSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. TrEMBL
Match: E5GCH0_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.8e-52
Identity = 130/164 (79.27%), Postives = 135/164 (82.32%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAATAVLRPSLAA QPTRRS +PLLPPR+GSPS F TSLK+SL+SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL- 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPL 
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 -----------------------SSRKELADDIEALKKKIAGAE 140
                                  SSRKELADDIEALKKKIAG E
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. TrEMBL
Match: A0A0A0L603_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119840 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.0e-51
Identity = 130/164 (79.27%), Postives = 132/164 (80.49%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAATAVLRPSLAA QPTR S +PLLPPR GSPS F TSLK SLESRRS LLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRLSVLPLLPPRFGSPSSFSTSLKFSLESRRSFLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL- 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPL 
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 -----------------------SSRKELADDIEALKKKIAGAE 140
                                  SSRKELADDIEALKKKIAGAE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. TrEMBL
Match: A0A061E0L7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-33
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1


Query: 2   AATASPTAATAVLRPSL-AAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 61
           AA +S  AATAVL P +  A + TR SA+PLLPPR+ + SF +S+K+  ESRR SLLQT+
Sbjct: 3   AAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQTK 62

Query: 62  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL-- 121
           AS  EE+++ DA ELFTDLKEKW+ +ENKSTVL+YGGGAIVAVWLS+ILVGA+NSVPL  
Sbjct: 63  AS--EETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 122

Query: 122 ----------------------SSRKELADDIEALKKKIAGAE 140
                                 SSRKELA DIEALKKKI+G E
Sbjct: 123 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

[Close]

BLAST of Cp4.1LG08g01120 vs. TrEMBL
Match: M0ZGZ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000204 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 9.1e-33
Identity = 96/168 (57.14%), Postives = 113/168 (67.26%), Query Frame = 1


Query: 1   MAATASPTAATAVLRP-----SLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSS 60
           MAA ++  AATAV        S     P R SA+P LPPRL + +FP+SLK ++  +RSS
Sbjct: 1   MAAASTSMAATAVFASRFPLSSTTKAAPARCSALPYLPPRLSATAFPSSLKFAVP-KRSS 60

Query: 61  LLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNS 120
           LLQ +ASSSEES A D SEL TDLKEKWDAL+NKSTV++YGGGAIVAVWLSS++VGA+NS
Sbjct: 61  LLQVKASSSEESGAVDTSELLTDLKEKWDALDNKSTVIVYGGGAIVAVWLSSVVVGAINS 120

Query: 121 VPL------------------------SSRKELADDIEALKKKIAGAE 140
           VPL                        SSRKELA+DIE LKKKIAG E
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELAEDIEQLKKKIAGTE 167

[Close]

BLAST of Cp4.1LG08g01120 vs. TrEMBL
Match: M5XDP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011635mg PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-32
Identity = 103/164 (62.80%), Postives = 111/164 (67.68%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60
           MAATAS  A TAV  P L A +PTR SA+P LPPRL S +    LK   ESRR SL Q R
Sbjct: 41  MAATASSMATTAVFMPRLPA-KPTRCSALPYLPPRLSSTTSSFPLKAFPESRRLSL-QIR 100

Query: 61  ASSSEESSAA-DASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL- 120
           ASSSEE+S + D  EL TDLKEKWDA+ENKSTV+LYGGGAIVAVWLSSI+VGAVNSVPL 
Sbjct: 101 ASSSEETSTSVDTGELLTDLKEKWDAVENKSTVILYGGGAIVAVWLSSIIVGAVNSVPLL 160

Query: 121 -----------------------SSRKELADDIEALKKKIAGAE 140
                                  SSRKELA DIEALKKKIAG E
Sbjct: 161 PKVLELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 202

[Close]

BLAST of Cp4.1LG08g01120 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 125.9 bits (315), Expect = 1.9e-29
Identity = 89/166 (53.61%), Postives = 111/166 (66.87%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPR-LGSPSFPTSLKISLES--RRSSLL 60
           MA + + +++ AV+ P + A   TR SA+P LPPR  G  SF   LK+   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVP 120
           +TRASS EE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGA+NSVP
Sbjct: 61  KTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 L------------------------SSRKELADDIEALKKKIAGAE 140
           L                        SSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. NCBI nr
Match: gi|659075065|ref|XP_008437946.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo])

HSP 1 Score: 213.4 bits (542), Expect = 2.5e-52
Identity = 130/164 (79.27%), Postives = 135/164 (82.32%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAATAVLRPSLAA QPTRRS +PLLPPR+GSPS F TSLK+SL+SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL- 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPL 
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 -----------------------SSRKELADDIEALKKKIAGAE 140
                                  SSRKELADDIEALKKKIAG E
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. NCBI nr
Match: gi|449432080|ref|XP_004133828.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis sativus])

HSP 1 Score: 209.9 bits (533), Expect = 2.8e-51
Identity = 130/164 (79.27%), Postives = 132/164 (80.49%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAATAVLRPSLAA QPTR S +PLLPPR GSPS F TSLK SLESRRS LLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRLSVLPLLPPRFGSPSSFSTSLKFSLESRRSFLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL- 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPL 
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 -----------------------SSRKELADDIEALKKKIAGAE 140
                                  SSRKELADDIEALKKKIAGAE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164

[Close]

BLAST of Cp4.1LG08g01120 vs. NCBI nr
Match: gi|1009142665|ref|XP_015888843.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 149.1 bits (375), Expect = 5.9e-33
Identity = 104/165 (63.03%), Postives = 115/165 (69.70%), Query Frame = 1


Query: 1   MAATASPTAATAVLRPSLAAP-QPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQ 60
           MAATA+  AA+ +L P L+   +PTR SA+PLLPPR+ S S FP  +K   ESRRSSLLQ
Sbjct: 1   MAATAAYAAASTLLIPRLSTTTRPTRCSALPLLPPRVSSQSSFP--IKQISESRRSSLLQ 60

Query: 61  TRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL 120
            RASS E S   DA ELFTDLKEKWDALENKSTV+LYGGGAIVA+WLSSILVGA+NSVPL
Sbjct: 61  IRASSEETS--VDAGELFTDLKEKWDALENKSTVILYGGGAIVALWLSSILVGAINSVPL 120

Query: 121 ------------------------SSRKELADDIEALKKKIAGAE 140
                                   SSRKELA DIEALKKKIAG E
Sbjct: 121 LPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 161

[Close]

BLAST of Cp4.1LG08g01120 vs. NCBI nr
Match: gi|565345161|ref|XP_006339666.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like [Solanum tuberosum])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 96/168 (57.14%), Postives = 113/168 (67.26%), Query Frame = 1


Query: 1   MAATASPTAATAVLRP-----SLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSS 60
           MAA ++  AATAV        S     P R SA+P LPPRL + +FP+SLK ++  +RSS
Sbjct: 1   MAAASTSMAATAVFASRFPLSSTTKAAPARCSALPYLPPRLSATAFPSSLKFAVP-KRSS 60

Query: 61  LLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNS 120
           LLQ +ASSSEES A D SEL TDLKEKWDAL+NKSTV++YGGGAIVAVWLSS++VGA+NS
Sbjct: 61  LLQVKASSSEESGAVDTSELLTDLKEKWDALDNKSTVIVYGGGAIVAVWLSSVVVGAINS 120

Query: 121 VPL------------------------SSRKELADDIEALKKKIAGAE 140
           VPL                        SSRKELA+DIE LKKKIAG E
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELAEDIEQLKKKIAGTE 167

[Close]

BLAST of Cp4.1LG08g01120 vs. NCBI nr
Match: gi|590721553|ref|XP_007051646.1| (Uncharacterized protein TCM_005215 [Theobroma cacao])

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1


Query: 2   AATASPTAATAVLRPSL-AAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 61
           AA +S  AATAVL P +  A + TR SA+PLLPPR+ + SF +S+K+  ESRR SLLQT+
Sbjct: 3   AAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQTK 62

Query: 62  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL-- 121
           AS  EE+++ DA ELFTDLKEKW+ +ENKSTVL+YGGGAIVAVWLS+ILVGA+NSVPL  
Sbjct: 63  AS--EETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 122

Query: 122 ----------------------SSRKELADDIEALKKKIAGAE 140
                                 SSRKELA DIEALKKKI+G E
Sbjct: 123 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g01120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CUT1A_ARATH	3.3e-28	53.61	Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ...	[more]

BLAST of Cp4.1LG08g01120 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GCH0_CUCME	1.8e-52	79.27	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L603_CUCSA	2.0e-51	79.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119840 PE=4 SV=1	[more]
A0A061E0L7_THECC	9.1e-33	59.51	Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1	[more]
M0ZGZ6_SOLTU	9.1e-33	57.14	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000204 PE=4 SV=1	[more]
M5XDP6_PRUPE	1.6e-32	62.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011635mg PE=4 SV=1	[more]

BLAST of Cp4.1LG08g01120 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G01150.1	1.9e-29	53.61	unknown protein	[more]

BLAST of Cp4.1LG08g01120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075065\|ref\|XP_008437946.1\|	2.5e-52	79.27	PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo]	[more]
gi\|449432080\|ref\|XP_004133828.1\|	2.8e-51	79.27	PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis sativus]	[more]
gi\|1009142665\|ref\|XP_015888843.1\|	5.9e-33	63.03	PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Ziziphus jujuba]	[more]
gi\|565345161\|ref\|XP_006339666.1\|	1.3e-32	57.14	PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like [Solanum tuberosum...	[more]
gi\|590721553\|ref\|XP_007051646.1\|	1.3e-32	59.51	Uncharacterized protein TCM_005215 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0009579	thylakoid

Vocabulary: **INTERPRO**
Term	Definition
IPR025564	CAAD_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0044434	chloroplast part
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g01120.1	Cp4.1LG08g01120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025564	Cyanobacterial aminoacyl-tRNA synthetase, CAAD domain	PFAM	PF14159	CAAD	coord: 78..118 score: 2.
None	No IPR available	unknown	Coil	Coil	coord: 121..139 scor
None	No IPR available	PANTHER	PTHR33222:SF4	PROTEIN CURVATURE THYLAKOID 1A, CHLOROPLASTIC	coord: 1..139 score: 2.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g01120	Cucsa.258950	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g01120	CmaCh14G020890	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g01120	CmaCh06G010380	Cucurbita maxima (Rimu)	cmacpeB847
Cp4.1LG08g01120	CmoCh06G010620	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g01120	CmoCh14G021500	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g01120	Cla021183	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g01120	Csa3G119840	Cucumber (Chinese Long) v2	cpecuB862
Cp4.1LG08g01120	MELO3C006053	Melon (DHL92) v3.5.1	cpemeB815
Cp4.1LG08g01120	ClCG05G001020	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g01120	CSPI03G08200	Wild cucumber (PI 183967)	cpecpiB864
Cp4.1LG08g01120	Lsi05G020960	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g01120	MELO3C006053.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g01120	CsaV3_3G008350	Cucumber (Chinese Long) v3	cpecucB1058
Cp4.1LG08g01120	Bhi01G000319	Wax gourd	cpewgoB1105
Cp4.1LG08g01120	CsGy3G008340	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g01120	Carg20877	Silver-seed gourd	carcpeB1380
Cp4.1LG08g01120	Carg20956	Silver-seed gourd	carcpeB0693

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG08g01120	Cp4.1LG03g16400	Cucurbita pepo (Zucchini)	cpecpeB482

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g01120	Melon (DHL92) v3.6.1	cpemedB929
Cp4.1LG08g01120	Cucumber (Chinese Long) v3	cpecucB1071
Cp4.1LG08g01120	Wax gourd	cpewgoB1098
Cp4.1LG08g01120	Cucurbita pepo (Zucchini)	cpecpeB254
Cp4.1LG08g01120	Cucumber (Gy14) v2	cgybcpeB704