CmoCh06G010620 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh06G010620
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionProtein CURVATURE THYLAKOID 1A, chloroplastic
LocationCmo_Chr06 : 8255241 .. 8258192 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAAGAAAATCTCTGCAAACACGAGGGATCGAAAAGTCGTTAGCAGCGGCAACTCCTCGACGGCCATTTGATTGGGGATTCCTCTCTCTTTCCGGCGTCGATTCTCAAGTTTGATTGAACTCTCGGCAAAGAAATGGCAGCCACGGCCTCTCCCACAGCGGCCATCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCTCCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGGTAACTTTCTCGTAAAATCCTATTAATTTTCTTTTGGGCAATTCGTCGAACACATTGTGTGCAAGATGAAATTCTCGGTCTGTTTTAGTTTCTGATGTTTTCGTTTCTCTTTGGGTATCTTCTTAGTTGGGTCTTGAATTTTGGAGCTTGGTTGTGTGTGTATCATTCGATTCATGAAGATAATTTGTCCCCGTGATTTGAGCCTGAACTTTTTTTAGTTTTATAGTTCATTCAATTCTGGCAACTCAACTGCTACACGATTGAGTGCGTTAAGTTTGCTGGTAGTCCTACATTATGAAAAAGTAGATTAAGGTGCTGTGATTTACTTCGAGACCTTACATATGAAATTTTTCAAACCAGTTTCACACATCATACATCTATAAACTATGCTTACTTTCAAGAGAAGCCTTGCGAATCTGTGAATTTAGAATGCCTAGGTTTATGCTTCCATTAAATATCTTAGATTTGTACAGCTTTTATGGAACTTCAGTTTTAGAGAATGATATGTAATAGCCTAAGCCCACTGTTAGTAGATATTGTTCGCTTCAGCTGATTACATATCGCCATCAGCATCACGATTTTAAAGCGCATTTACTAGGGAAAAGTTTCCACACCCTTGTAAGAAAGCTTCGTTCCCCTCTCCAACCAACGTGGGATCGCACAATCCACTCCCCTTGGGAACCAACGTCCTCTCACTAGCATACTGCCAAGTGTTTGGCTCTGATACCATTTGTAATAGTCAAGTCCATCTCTAGTAGATATTGTCCGTTATGTATTACCATCAGCCTCACGATTTTAAAACACGTCTACTAGAGAGAGATTTTCACACCCATATAAGGAATGCTTTGTTCCCCTTTCCAGCCAATGTGGGATCTCCTTGGGAGCCAACATCCTCACTGGCACACTATCCAGTGTTAGGCTTTGATACCATTTGTAATAGCCAAGCCCATCTGTAGTAGATATTGTCTGCTTTGGCCCGTTATGTATCACCATCAGCCTCACGATTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCCTATAAGGAATGTTTTGTTCCCCTCTCCAACCAAGGTGAGATCTCACGAGATATGTTCCATGGACTTAAAAGGAAATCAGAGAAAACTTCATAATTGGAAATGAGGTCTGTAGTTTAAGAACATGGTTCACTTTTTGTGTGATAAAAATTGTCGTTTTATCGTTCATTGCTATTTTTGAATTGTGAATTAGATAATTTGTCACTGAAATGTTAGTTTCTTGATTTAGACCCCTTTAGATTCAAATGGGATTTTCCCAACTTACCATTTGGTGACAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGGTATATTATTCTTCATCATTCATTTTATGGTCTTTTTTGTTTCTTATACTAATGTCATATTGTTTATTAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGGTAAATGATTCCATCAAGCTCATGCTTCTGCTTAAATATTTATACTTCCAATTTGTTTCTTCCCCTTCTAAAAGCCCATTTGATACTCAATCTTCATCTATTCTCCCCAGCTTCCGAAGATCCTGGAGTTGGTCGGACTTGGATATACAGGGTGGTTCGTGTACCGATATCTACTCTTCAAGGTAAGTAGAGAAAAGAATTAAGACCTGTATCAGAGAAAAGAATTAAGACCTGTATCAAACAAGATTTGTCGAGGATTGTTGGGAGAGGAATCACACGTTGACTAATTAAGGGTTGATAATGAGAGGAATCACACGTTGACTAATTAAGGGTTGATAATAATTTATAAGTAAGGAATACATCGCTATTGGTATGAGGTCTTAAAACAAAAAGTAAAGCCATGAGAGAAGTAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATAGTAAAGTCACGAGAATTTGTGCTCAAAGTGGACAATATTATACCATTACGGAGGTTCGTGATTTACAACAAAATCTGCATTGTGTCATCATTTTAATGTTTGATGCTTTCTCAAGCTTCACCCTTGATGAGATTTTGCTATGGTTTCTAAGTTTTGTTCGAGATTAAAACGTTCGTGTCACATGTTTCTAAAGAGATTATTGGATGAAAATGGCAATCTGAGAGTTCTAAGAAACCATAGAAATGTAATCATAGCTCTTGGTTGGTTCTGCAACTGGACATTGACTTGAAGAATGTTGTTTGTTTCTTCTTGCTTCCTCAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAAGATGCGCGTTATCGGGCGCCGTGTTTCGACATGCATGGTTCCTCTTATGAATCATCATTTTGTACTCTACTCCACTTAGTTTGTAAGAGGCAATATGTCCCCTTTTCTTTGTATCTGTATAATAAGATTTGTCAAGTTCATTAAATGGAAACAATCTCTTTTTTCTCAAAACTTATTTCTTGCTTCAGAAAAAGAAAATGGTGAAATTCATTGAAAATGAAGCCGAGTCGAGTTCACTGGTTG

mRNA sequence

CAAAAAGAAAATCTCTGCAAACACGAGGGATCGAAAAGTCGTTAGCAGCGGCAACTCCTCGACGGCCATTTGATTGGGGATTCCTCTCTCTTTCCGGCGTCGATTCTCAAGTTTGATTGAACTCTCGGCAAAGAAATGGCAGCCACGGCCTCTCCCACAGCGGCCATCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCTCCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTCGGACTTGGATATACAGGGTGGTTCGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAAGATGCGCGTTATCGGGCGCCGTGTTTCGACATGCATGGTTCCTCTTATGAATCATCATTTTGTACTCTACTCCACTTAGTTTGTAAGAGGCAATATGTCCCCTTTTCTTTGTATCTGTATAATAAGATTTGTCAAGTTCATTAAATGGAAACAATCTCTTTTTTCTCAAAACTTATTTCTTGCTTCAGAAAAAGAAAATGGTGAAATTCATTGAAAATGAAGCCGAGTCGAGTTCACTGGTTG

Coding sequence (CDS)

ATGGCAGCCACGGCCTCTCCCACAGCGGCCATCGCCGTTCTGAGACCTTCTCTGGCTGCTCCGCAACCCACTCGCCGCTCCGCCATGCCGCTCCTCCCTCCTCGACTCGGCTCCCCTTCTTTCCCCACTTCCCTCAAAATCTCCTTAGAGTCTCGTAGATCGTCTCTGCTTCAAACCCGAGCCTCATCTTCAGAAGAATCATCTGCTGCTGATGCTTCTGAGCTCTTTACAGACTTGAAAGAAAAGTGGGATGCCCTTGAGAACAAATCTACGGTACTTCTCTATGGAGGTGGGGCGATTGTTGCTGTATGGCTTTCTTCAATTCTTGTTGGTGCAGTCAACTCAGTTCCATTGCTTCCGAAGATCCTGGAGTTGGTCGGACTTGGATATACAGGGTGGTTCGTGTACCGATATCTACTCTTCAAGTCAAGCAGAAAGGAGCTAGCTGATGACATTGAAGCATTGAAGAAGAAGATTGCTGGAGCAGAATAA
Homology
[Close]
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match: CUT1A_ARATH (Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.9e-47
Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPR-LGSPSFPTSLKISLES--RRSSLL 60
           MA + + ++++AV+ P + A   TR SA+P LPPR  G  SF   LK+   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVP 120
           +TRASS EE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGA+NSVP
Sbjct: 61  KTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match: CUT1D_ARATH (Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-15
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 1 

Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAV 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match: CUT1B_ARATH (Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 41/160 (25.62%), Postives = 88/160 (55.00%), Query Frame = 1 

Query: 3   ATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTRAS 62
           A+AS ++   +  P+L     TR +          + ++   +  ++ +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAAK---------ATAYCRKIVRNVVTRATTEVGEAPA 82

Query: 63  SSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ A++ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGA 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match: CUT1C_ARATH (Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 1 

Query: 47  ISLESRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLS 106
           +SL    SS+     +S E S ++   ++ + ++  WD  E++  ++  G   IVA+W S
Sbjct: 41  LSLTRNPSSISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWAS 100

Query: 107 SILVGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIA 161
             L+ A++ +P++    ELVG+ ++ WF YRYLLFK  R+EL+   + +KK +A
Sbjct: 101 LNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELS---KIVKKSVA 151

[Close]
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match: SYE_TRIEI (Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 7.7e-08
Identity = 30/70 (42.86%), Postives = 50/70 (71.43%), Query Frame = 1 

Query: 94  LYGGGAIVAVWLS--SILVGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADD 153
           L+G  A+V +  +  ++++ A++ +P+L  I EL+G+ Y  WFVYRYLL +S+R+EL D 
Sbjct: 809 LFGWLALVILTFTFMAVVIEALDGIPILSIIFELIGVIYLVWFVYRYLLKRSNRQELLDK 868

Query: 154 IEALKKKIAG 162
           IE +K++I G
Sbjct: 869 IENIKREIFG 878

[Close]
BLAST of CmoCh06G010620 vs. TrEMBL
Match: E5GCH0_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.5e-71
Identity = 153/164 (93.29%), Postives = 158/164 (96.34%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAA AVLRPSLAA QPTRRS +PLLPPR+GSPS F TSLK+SL+SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]
BLAST of CmoCh06G010620 vs. TrEMBL
Match: A0A0A0L603_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119840 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 4.9e-70
Identity = 153/164 (93.29%), Postives = 155/164 (94.51%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAA AVLRPSLAA QPTR S +PLLPPR GSPS F TSLK SLESRRS LLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRLSVLPLLPPRFGSPSSFSTSLKFSLESRRSFLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164

[Close]
BLAST of CmoCh06G010620 vs. TrEMBL
Match: A0A061E0L7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51
Identity = 119/163 (73.01%), Postives = 139/163 (85.28%), Query Frame = 1 

Query: 2   AATASPTAAIAVLRPSL-AAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 61
           AA +S  AA AVL P +  A + TR SA+PLLPPR+ + SF +S+K+  ESRR SLLQT+
Sbjct: 3   AAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQTK 62

Query: 62  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 121
           AS  EE+++ DA ELFTDLKEKW+ +ENKSTVL+YGGGAIVAVWLS+ILVGA+NSVPLLP
Sbjct: 63  AS--EETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 122

Query: 122 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KI+ELVGLGYTGWFVYRYLLFKSSRKELA DIEALKKKI+G E
Sbjct: 123 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

[Close]
BLAST of CmoCh06G010620 vs. TrEMBL
Match: M0ZGZ6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000204 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 3.9e-51
Identity = 118/168 (70.24%), Postives = 136/168 (80.95%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRP-----SLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSS 60
           MAA ++  AA AV        S     P R SA+P LPPRL + +FP+SLK ++  +RSS
Sbjct: 1   MAAASTSMAATAVFASRFPLSSTTKAAPARCSALPYLPPRLSATAFPSSLKFAVP-KRSS 60

Query: 61  LLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNS 120
           LLQ +ASSSEES A D SEL TDLKEKWDAL+NKSTV++YGGGAIVAVWLSS++VGA+NS
Sbjct: 61  LLQVKASSSEESGAVDTSELLTDLKEKWDALDNKSTVIVYGGGAIVAVWLSSVVVGAINS 120

Query: 121 VPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           VPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELA+DIE LKKKIAG E
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELAEDIEQLKKKIAGTE 167

[Close]
BLAST of CmoCh06G010620 vs. TrEMBL
Match: M5XDP6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011635mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-51
Identity = 125/164 (76.22%), Postives = 134/164 (81.71%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 60
           MAATAS  A  AV  P L A +PTR SA+P LPPRL S +    LK   ESRR SL Q R
Sbjct: 41  MAATASSMATTAVFMPRLPA-KPTRCSALPYLPPRLSSTTSSFPLKAFPESRRLSL-QIR 100

Query: 61  ASSSEESSAA-DASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLL 120
           ASSSEE+S + D  EL TDLKEKWDA+ENKSTV+LYGGGAIVAVWLSSI+VGAVNSVPLL
Sbjct: 101 ASSSEETSTSVDTGELLTDLKEKWDAVENKSTVILYGGGAIVAVWLSSIIVGAVNSVPLL 160

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PK+LELVGLGYTGWFVYRYLLFKSSRKELA DIEALKKKIAG E
Sbjct: 161 PKVLELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 202

[Close]
BLAST of CmoCh06G010620 vs. TAIR10
Match: AT4G01150.1 (AT4G01150.1 unknown protein)

HSP 1 Score: 189.5 bits (480), Expect = 1.6e-48
Identity = 111/166 (66.87%), Postives = 136/166 (81.93%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPR-LGSPSFPTSLKISLES--RRSSLL 60
           MA + + ++++AV+ P + A   TR SA+P LPPR  G  SF   LK+   +  ++  LL
Sbjct: 1   MAISVAASSSMAVMVPRVPAVS-TRCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKVELL 60

Query: 61  QTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVP 120
           +TRASS EE+S+ D +EL TDLKEKWD LENKSTVL+YGGGAIVAVWLSSI+VGA+NSVP
Sbjct: 61  KTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVP 120

Query: 121 LLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           LLPK++ELVGLGYTGWFVYRYLLFKSSRKELA+DIE+LKKKIAG+E
Sbjct: 121 LLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164

[Close]
BLAST of CmoCh06G010620 vs. TAIR10
Match: AT4G38100.1 (AT4G38100.1 unknown protein)

HSP 1 Score: 84.7 bits (208), Expect = 5.6e-17
Identity = 47/110 (42.73%), Postives = 72/110 (65.45%), Query Frame = 1 

Query: 58  QTRASSSEESSAAD----ASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAV 117
           + + S+SE   A D    A E   D+K   D      ++LLYG GAIVA++L+S +V ++
Sbjct: 85  EEKNSNSEAPQAEDEETQALEFLNDIKLDSD---KTYSILLYGSGAIVALYLTSAIVSSL 144

Query: 118 NSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
            ++PL PK++E+VGLGYT WF  RYLLFK +R+EL   +  +KK++ G++
Sbjct: 145 EAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSD 191

[Close]
BLAST of CmoCh06G010620 vs. TAIR10
Match: AT2G46820.1 (AT2G46820.1 photosystem I P subunit)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 41/160 (25.62%), Postives = 88/160 (55.00%), Query Frame = 1 

Query: 3   ATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTRAS 62
           A+AS ++   +  P+L     TR +          + ++   +  ++ +R ++ +    +
Sbjct: 23  ASASASSPSCISLPTLPIQSHTRAAK---------ATAYCRKIVRNVVTRATTEVGEAPA 82

Query: 63  SSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLPKI 122
           ++ E+   +  E+    +E W+ +++K  +       +VA+W S+ ++ A++ +PL+P +
Sbjct: 83  TTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGV 142

Query: 123 LELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGA 163
           LELVG+GYTGWF Y+ L+FK  R+ L + +++  K I G+
Sbjct: 143 LELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGS 173

[Close]
BLAST of CmoCh06G010620 vs. TAIR10
Match: AT1G52220.1 (AT1G52220.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-10
Identity = 38/114 (33.33%), Postives = 67/114 (58.77%), Query Frame = 1 

Query: 47  ISLESRRSSLLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLS 106
           +SL    SS+     +S E S ++   ++ + ++  WD  E++  ++  G   IVA+W S
Sbjct: 41  LSLTRNPSSISLMVKASGESSDSSTDLDVVSTIQNVWDKSEDRLGLIGLGFAGIVALWAS 100

Query: 107 SILVGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIA 161
             L+ A++ +P++    ELVG+ ++ WF YRYLLFK  R+EL+   + +KK +A
Sbjct: 101 LNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELS---KIVKKSVA 151

[Close]
BLAST of CmoCh06G010620 vs. NCBI nr
Match: gi|659075065|ref|XP_008437946.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 6.4e-71
Identity = 153/164 (93.29%), Postives = 158/164 (96.34%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAA AVLRPSLAA QPTRRS +PLLPPR+GSPS F TSLK+SL+SRRSSLLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRRSVLPLLPPRVGSPSSFSTSLKLSLDSRRSSLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAG E
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGTE 164

[Close]
BLAST of CmoCh06G010620 vs. NCBI nr
Match: gi|449432080|ref|XP_004133828.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 7.1e-70
Identity = 153/164 (93.29%), Postives = 155/164 (94.51%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAPQPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQT 60
           MAATASPTAA AVLRPSLAA QPTR S +PLLPPR GSPS F TSLK SLESRRS LLQT
Sbjct: 1   MAATASPTAATAVLRPSLAASQPTRLSVLPLLPPRFGSPSSFSTSLKFSLESRRSFLLQT 60

Query: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLL 120
           RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGA+NSVPLL
Sbjct: 61  RASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAINSVPLL 120

Query: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE
Sbjct: 121 PKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164

[Close]
BLAST of CmoCh06G010620 vs. NCBI nr
Match: gi|1009142665|ref|XP_015888843.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRPSLAAP-QPTRRSAMPLLPPRLGSPS-FPTSLKISLESRRSSLLQ 60
           MAATA+  AA  +L P L+   +PTR SA+PLLPPR+ S S FP  +K   ESRRSSLLQ
Sbjct: 1   MAATAAYAAASTLLIPRLSTTTRPTRCSALPLLPPRVSSQSSFP--IKQISESRRSSLLQ 60

Query: 61  TRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPL 120
            RASS E S   DA ELFTDLKEKWDALENKSTV+LYGGGAIVA+WLSSILVGA+NSVPL
Sbjct: 61  IRASSEETS--VDAGELFTDLKEKWDALENKSTVILYGGGAIVALWLSSILVGAINSVPL 120

Query: 121 LPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           LPKI+ELVGLGYTGWFVYRYLLFKSSRKELA DIEALKKKIAG E
Sbjct: 121 LPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 161

[Close]
BLAST of CmoCh06G010620 vs. NCBI nr
Match: gi|565345161|ref|XP_006339666.1| (PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like [Solanum tuberosum])

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51
Identity = 118/168 (70.24%), Postives = 136/168 (80.95%), Query Frame = 1 

Query: 1   MAATASPTAAIAVLRP-----SLAAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSS 60
           MAA ++  AA AV        S     P R SA+P LPPRL + +FP+SLK ++  +RSS
Sbjct: 1   MAAASTSMAATAVFASRFPLSSTTKAAPARCSALPYLPPRLSATAFPSSLKFAVP-KRSS 60

Query: 61  LLQTRASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNS 120
           LLQ +ASSSEES A D SEL TDLKEKWDAL+NKSTV++YGGGAIVAVWLSS++VGA+NS
Sbjct: 61  LLQVKASSSEESGAVDTSELLTDLKEKWDALDNKSTVIVYGGGAIVAVWLSSVVVGAINS 120

Query: 121 VPLLPKILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           VPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELA+DIE LKKKIAG E
Sbjct: 121 VPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELAEDIEQLKKKIAGTE 167

[Close]
BLAST of CmoCh06G010620 vs. NCBI nr
Match: gi|590721553|ref|XP_007051646.1| (Uncharacterized protein TCM_005215 [Theobroma cacao])

HSP 1 Score: 209.1 bits (531), Expect = 5.6e-51
Identity = 119/163 (73.01%), Postives = 139/163 (85.28%), Query Frame = 1 

Query: 2   AATASPTAAIAVLRPSL-AAPQPTRRSAMPLLPPRLGSPSFPTSLKISLESRRSSLLQTR 61
           AA +S  AA AVL P +  A + TR SA+PLLPPR+ + SF +S+K+  ESRR SLLQT+
Sbjct: 3   AAASSSMAATAVLIPRVPTALRTTRCSALPLLPPRVSTASFSSSVKLIPESRRFSLLQTK 62

Query: 62  ASSSEESSAADASELFTDLKEKWDALENKSTVLLYGGGAIVAVWLSSILVGAVNSVPLLP 121
           AS  EE+++ DA ELFTDLKEKW+ +ENKSTVL+YGGGAIVAVWLS+ILVGA+NSVPLLP
Sbjct: 63  AS--EETTSVDAGELFTDLKEKWEKIENKSTVLIYGGGAIVAVWLSAILVGAINSVPLLP 122

Query: 122 KILELVGLGYTGWFVYRYLLFKSSRKELADDIEALKKKIAGAE 164
           KI+ELVGLGYTGWFVYRYLLFKSSRKELA DIEALKKKI+G E
Sbjct: 123 KIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 163

The following BLAST results are available for this feature:
BLAST of CmoCh06G010620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CUT1A_ARATH2.9e-4766.87Protein CURVATURE THYLAKOID 1A, chloroplastic OS=Arabidopsis thaliana GN=CURT1A ... [more]
CUT1D_ARATH1.0e-1542.73Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana GN=CURT1D ... [more]
CUT1B_ARATH4.8e-1025.63Protein CURVATURE THYLAKOID 1B, chloroplastic OS=Arabidopsis thaliana GN=CURT1B ... [more]
CUT1C_ARATH1.8e-0933.33Protein CURVATURE THYLAKOID 1C, chloroplastic OS=Arabidopsis thaliana GN=CURT1C ... [more]
SYE_TRIEI7.7e-0842.86Glutamate--tRNA ligase OS=Trichodesmium erythraeum (strain IMS101) GN=gltX PE=3 ... [more]
BLAST of CmoCh06G010620 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCH0_CUCME4.5e-7193.29Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0L603_CUCSA4.9e-7093.29Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119840 PE=4 SV=1[more]
A0A061E0L7_THECC3.9e-5173.01Uncharacterized protein OS=Theobroma cacao GN=TCM_005215 PE=4 SV=1[more]
M0ZGZ6_SOLTU3.9e-5170.24Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000204 PE=4 SV=1[more]
M5XDP6_PRUPE6.7e-5176.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011635mg PE=4 SV=1[more]
BLAST of CmoCh06G010620 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G01150.11.6e-4866.87 unknown protein[more]
AT4G38100.15.6e-1742.73 unknown protein[more]
AT2G46820.12.7e-1125.63 photosystem I P subunit[more]
AT1G52220.11.0e-1033.33 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmoCh06G010620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075065|ref|XP_008437946.1|6.4e-7193.29PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis melo][more]
gi|449432080|ref|XP_004133828.1|7.1e-7093.29PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Cucumis sativus][more]
gi|1009142665|ref|XP_015888843.1|1.5e-5176.97PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Ziziphus jujuba][more]
gi|565345161|ref|XP_006339666.1|5.6e-5170.24PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like [Solanum tuberosum... [more]
gi|590721553|ref|XP_007051646.1|5.6e-5173.01Uncharacterized protein TCM_005215 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025564CAAD_dom
Vocabulary: Cellular Component
TermDefinition
GO:0009579thylakoid
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010287 plastoglobule
cellular_component GO:0005575 cellular_component
cellular_component GO:0009579 thylakoid
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh06G010620.1CmoCh06G010620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025564Cyanobacterial aminoacyl-tRNA synthetase, CAAD domainPFAMPF14159CAADcoord: 78..161
score: 7.4
NoneNo IPR availableunknownCoilCoilcoord: 145..163
scor
NoneNo IPR availablePANTHERPTHR33222:SF4PROTEIN CURVATURE THYLAKOID 1A, CHLOROPLASTICcoord: 1..163
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh06G010620Cucsa.258950Cucumber (Gy14) v1cgycmoB0718
CmoCh06G010620CmaCh14G020890Cucurbita maxima (Rimu)cmacmoB271
CmoCh06G010620CmaCh06G010380Cucurbita maxima (Rimu)cmacmoB831
CmoCh06G010620Cla021183Watermelon (97103) v1cmowmB793
CmoCh06G010620Csa3G119840Cucumber (Chinese Long) v2cmocuB806
CmoCh06G010620MELO3C006053Melon (DHL92) v3.5.1cmomeB755
CmoCh06G010620ClCG05G001020Watermelon (Charleston Gray)cmowcgB743
CmoCh06G010620CSPI03G08200Wild cucumber (PI 183967)cmocpiB814
CmoCh06G010620Lsi05G020960Bottle gourd (USVL1VR-Ls)cmolsiB758
CmoCh06G010620Cp4.1LG03g16400Cucurbita pepo (Zucchini)cmocpeB787
CmoCh06G010620Cp4.1LG08g01120Cucurbita pepo (Zucchini)cmocpeB796
CmoCh06G010620MELO3C006053.2Melon (DHL92) v3.6.1cmomedB857
CmoCh06G010620CsaV3_3G008350Cucumber (Chinese Long) v3cmocucB0953
CmoCh06G010620Cla97C05G081290Watermelon (97103) v2cmowmbB833
CmoCh06G010620Bhi01G000319Wax gourdcmowgoB1013
CmoCh06G010620CsGy3G008340Cucumber (Gy14) v2cgybcmoB401
CmoCh06G010620Carg20877Silver-seed gourdcarcmoB1332
CmoCh06G010620Carg20956Silver-seed gourdcarcmoB0665
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh06G010620CmoCh14G021500Cucurbita moschata (Rifu)cmocmoB224
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh06G010620Cucumber (Chinese Long) v3cmocucB0976
CmoCh06G010620Watermelon (97103) v2cmowmbB810
CmoCh06G010620Watermelon (97103) v2cmowmbB835
CmoCh06G010620Wax gourdcmowgoB1002
CmoCh06G010620Cucurbita maxima (Rimu)cmacmoB829
CmoCh06G010620Melon (DHL92) v3.6.1cmomedB836