Cp4.1LG08g00320 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g00320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	UvrABC system protein C
Location	Cp4.1LG08 : 4382550 .. 4383877 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCAATTATTTTGGAGAGTAAATTAAAAGAGATGAAACAAATAGTGTTCATAATTCTGTAGAATATCAAGAACAATGTTGCGTTGTCCTGTTCATTAAAAAGTAGTCTGTAAAAGACAAAAAGCGAAGGCCATCGGGCCGCGGGGCCATCGCCATCATCATCATCATCTGCCCATATATGAGGATTCAGGAGGTATTGTTTATTTAGAAAGCAAAGGATTCTTGCGCTCTGTTCTTTTCCATCGAACATATTCCCTTCTTGTTCTTCTTCTTATGCCCATTTTAATTCTCTGTTGCTATGTTCTAGCTTCCGGGTATGGGAAATTGCGTGTTGAAAGTCGCCGGAGAAAGGGTGGATGTGGTGAAAGTGGTGACTGTCGACGGCGGAATTATGGAGCTTTATGCGCCGATTACGGCGGAGTGCATAACAGGGGAATATCCCGGCCACGCGATTTTTACGAGCCGAAGTATATTCTCGGAGCCCCTTCTTCATAAGGATGAGCTTCACGCGGGTCAAGTGTATTACCTTCTCCCGCTTAACCCTTACAAGCCCTCTGCTAAAATCGAGGCGGACGCGCCCAGCGTTGTTTCCACGCCGTATCGGATGTCGACGTGCGAGTCGCAGAATGCGGTTGCGAAGAAGCGGGCGGCGGAGGGGGAGGCGGAGGTGTTTCCGAAGTATAGTAGTACGGGCGTTTGGAAGGTGAAGCTGGTGATTTGCCCGGAACAGCTGTCGGAGATCTTGAAACAGGGTAATCGTACGGAGGAGTTGATTGAGAACGTGAGGACGGTGGCTAAGTGTGGAAACGGCGTCGGATCGGCTGCTAGCTCCGATCATTCCAGTGTGGCAGGGAGCTGGAAGGGATCCGCCATGGATAAGCCCCAGTATGGATTGAAATAATATATATAATATATAAATCTATACATATATGTTTGTCCTTTTTTTTCCCTTCTTTGTATCATATTAACAATGGCTGCACCCATAAATTAAAATTACGCACAATCTCTTGGGTCGAGGATTAGTTAATCAAGCAATTAGCAATGCCCGTTTGAAAGCGCGAGCGTTTTTCAATTATGGGTCTCTATAACAATATGACATTGTCTACCGTAAACATAAGTTCTTGATGATTTTATTTAGGCTTCTTCAAAATGTATCGCACCAATTAAAATGTATTTGACTTAGTATTTGGAAGAAGAGAGGAGAAGCAGTGGACCTCAAAGGCTTTGTTGCAGAAAGAACAATGACAATCTGAAAAGGCCATGGCAGGAGAAAATCAAGTGTCTATCAATTTTGGAATCTGGTCCAATTCTATGCCACTAATAATT

mRNA sequence

ATGCTCAATTATTTTGGAGAGTAAATTAAAAGAGATGAAACAAATAGTGTTCATAATTCTGTAGAATATCAAGAACAATGTTGCGTTGTCCTGTTCATTAAAAAGTAGTCTGTAAAAGACAAAAAGCGAAGGCCATCGGGCCGCGGGGCCATCGCCATCATCATCATCATCTGCCCATATATGAGGATTCAGGAGCTTCCGGGTATGGGAAATTGCGTGTTGAAAGTCGCCGGAGAAAGGGTGGATGTGGTGAAAGTGGTGACTGTCGACGGCGGAATTATGGAGCTTTATGCGCCGATTACGGCGGAGTGCATAACAGGGGAATATCCCGGCCACGCGATTTTTACGAGCCGAAGTATATTCTCGGAGCCCCTTCTTCATAAGGATGAGCTTCACGCGGGTCAAGTGTATTACCTTCTCCCGCTTAACCCTTACAAGCCCTCTGCTAAAATCGAGGCGGACGCGCCCAGCGTTGTTTCCACGCCGTATCGGATGTCGACGTGCGAGTCGCAGAATGCGGTTGCGAAGAAGCGGGCGGCGGAGGGGGAGGCGGAGGTGTTTCCGAAGTATAGTAGTACGGGCGTTTGGAAGGTGAAGCTGGTGATTTGCCCGGAACAGCTGTCGGAGATCTTGAAACAGGGTAATCGTACGGAGGAGTTGATTGAGAACGTGAGGACGGTGGCTAAGTGTGGAAACGGCGTCGGATCGGCTGCTAGCTCCGATCATTCCAGTGTGGCAGGGAGCTGGAAGGGATCCGCCATGGATAAGCCCCAGTATGGATTGAAATAATATATATAATATATAAATCTATACATATATGTTTGTCCTTTTTTTTCCCTTCTTTGTATCATATTAACAATGGCTGCACCCATAAATTAAAATTACGCACAATCTCTTGGGTCGAGGATTAGTTAATCAAGCAATTAGCAATGCCCGTTTGAAAGCGCGAGCGTTTTTCAATTATGGGTCTCTATAACAATATGACATTGTCTACCGTAAACATAAGTTCTTGATGATTTTATTTAGGCTTCTTCAAAATGTATCGCACCAATTAAAATGTATTTGACTTAGTATTTGGAAGAAGAGAGGAGAAGCAGTGGACCTCAAAGGCTTTGTTGCAGAAAGAACAATGACAATCTGAAAAGGCCATGGCAGGAGAAAATCAAGTGTCTATCAATTTTGGAATCTGGTCCAATTCTATGCCACTAATAATT

Coding sequence (CDS)

ATGAGGATTCAGGAGCTTCCGGGTATGGGAAATTGCGTGTTGAAAGTCGCCGGAGAAAGGGTGGATGTGGTGAAAGTGGTGACTGTCGACGGCGGAATTATGGAGCTTTATGCGCCGATTACGGCGGAGTGCATAACAGGGGAATATCCCGGCCACGCGATTTTTACGAGCCGAAGTATATTCTCGGAGCCCCTTCTTCATAAGGATGAGCTTCACGCGGGTCAAGTGTATTACCTTCTCCCGCTTAACCCTTACAAGCCCTCTGCTAAAATCGAGGCGGACGCGCCCAGCGTTGTTTCCACGCCGTATCGGATGTCGACGTGCGAGTCGCAGAATGCGGTTGCGAAGAAGCGGGCGGCGGAGGGGGAGGCGGAGGTGTTTCCGAAGTATAGTAGTACGGGCGTTTGGAAGGTGAAGCTGGTGATTTGCCCGGAACAGCTGTCGGAGATCTTGAAACAGGGTAATCGTACGGAGGAGTTGATTGAGAACGTGAGGACGGTGGCTAAGTGTGGAAACGGCGTCGGATCGGCTGCTAGCTCCGATCATTCCAGTGTGGCAGGGAGCTGGAAGGGATCCGCCATGGATAAGCCCCAGTATGGATTGAAATAA

Protein sequence

MRIQELPGMGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHSSVAGSWKGSAMDKPQYGLK

Homology

[Close]

BLAST of Cp4.1LG08g00320 vs. TrEMBL
Match: A0A0A0L3K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116850 PE=4 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.7e-60
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 1


Query: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFS 68
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIF +RSIFS
Sbjct: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60

Query: 69  EPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEG 128
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120

Query: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180

Query: 189 SSVAGSWKGSAMDKPQYGLK 203
           SSVAGSWK    DKP YG K
Sbjct: 181 SSVAGSWK----DKPHYGFK 183

[Close]

BLAST of Cp4.1LG08g00320 vs. TrEMBL
Match: M5XDU0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012029mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.2e-53
Identity = 119/190 (62.63%), Postives = 139/190 (73.16%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  GE  ++VKVVT  GGIMELYAPITA  IT E+PGHAIF SR +F++PLLH 
Sbjct: 1   MGNCVFKGFGEAEEMVKVVTSSGGIMELYAPITANAITTEFPGHAIFKSRDLFAQPLLHN 60

Query: 69  DELHAGQVYYLLPLNPYKPSAK----IEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEA 128
           +ELH  ++YYLLPLNPYK + K    I  +    VSTPYRMS C+SQ  + K+     + 
Sbjct: 61  EELHPKELYYLLPLNPYKSTPKDHENINVNPNGAVSTPYRMS-CDSQGLLRKR----ADP 120

Query: 129 EVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCG-NGVGSAASSDHS 188
           EVFP+Y+S+GVWKVKLVI PEQLSEIL Q  RTE LIE+VRTVAKCG  G  SAA SD  
Sbjct: 121 EVFPRYNSSGVWKVKLVISPEQLSEILSQEARTEALIESVRTVAKCGTGGNSSAAGSDQW 180

Query: 189 SVAGSWKGSA 194
           SV+ SWK SA
Sbjct: 181 SVSSSWKESA 185

[Close]

BLAST of Cp4.1LG08g00320 vs. TrEMBL
Match: F6I2X8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02650 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.7e-51
Identity = 117/190 (61.58%), Postives = 138/190 (72.63%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  G+  +++KVVT +GGIMELYAPITAE IT E+PGHAIF S  +FS+PLLH 
Sbjct: 1   MGNCVFKGFGQVEEMIKVVTSNGGIMELYAPITAENITNEFPGHAIFRSPDLFSQPLLHS 60

Query: 69  DELHAGQVYYLLPLNPYKPSAKIEAD-----APSVVSTPYRMSTCESQNAVAKKRAAEGE 128
           +ELHAG++YYLLP N  +     E       + S + TPYRMS  ++Q  V +       
Sbjct: 61  EELHAGELYYLLPQNAGRVGTVSETKLSDNTSTSSLITPYRMSF-DNQGLVKRSYP---- 120

Query: 129 AEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDHS 188
            EVFP+YSSTGVWKVKLVI PEQLSEIL Q +RTE LIE+VRTVAKCGNGV S ASSD  
Sbjct: 121 -EVFPRYSSTGVWKVKLVISPEQLSEILLQESRTEALIESVRTVAKCGNGVSSMASSDQW 180

Query: 189 SVAGSWKGSA 194
           SVA SWKGS+
Sbjct: 181 SVASSWKGSS 184

[Close]

BLAST of Cp4.1LG08g00320 vs. TrEMBL
Match: A0A061DT80_THECC (UvrABC system protein C OS=Theobroma cacao GN=TCM_005045 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 8.3e-51
Identity = 116/201 (57.71%), Postives = 139/201 (69.15%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  GE  ++VKVVT  GGIMEL+APITAECIT E+PGHAI+ +R +FS+PLLH 
Sbjct: 1   MGNCVFKGFGEVEEMVKVVTSSGGIMELFAPITAECITNEFPGHAIYRTRDLFSQPLLHN 60

Query: 69  DELHAGQVYYLLPLN-----------------PYKPSAKIEADAPSVVSTPYRMSTCESQ 128
           +ELHAG++YYLLPLN                   K    I + + S V+TPYRMS     
Sbjct: 61  EELHAGELYYLLPLNNSFTKQNNQNIKSLQDDDSKIGNNIISTSSSSVTTPYRMSF--DH 120

Query: 129 NAVAKKRAAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCG 188
             V K+     EAEV P+Y+S+GVWKVKLVI P+QL+EIL Q  RTE LIE+VRTVAKCG
Sbjct: 121 QRVLKR----SEAEVLPRYNSSGVWKVKLVISPDQLAEILAQEARTEALIESVRTVAKCG 180

Query: 189 NGVGSAASSDHSSVAGSWKGS 193
           NGV S A+SD  SV+ SWKGS
Sbjct: 181 NGVSSVANSDQWSVSSSWKGS 195

[Close]

BLAST of Cp4.1LG08g00320 vs. TrEMBL
Match: B9I940_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s10070g PE=4 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-50
Identity = 118/202 (58.42%), Postives = 142/202 (70.30%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDV---VKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPL 68
           MGNCV K     V+V   +KVVT +GGIMELY+PITAECIT E+PGHAI+ SR +FS+PL
Sbjct: 1   MGNCVFKGFSLEVEVEEMIKVVTTNGGIMELYSPITAECITNEFPGHAIYRSRDLFSQPL 60

Query: 69  LHKDELHAGQVYYLLPLNPYKPSA----------KIEADAPSVVSTPYRMSTCESQNAVA 128
            H +ELH GQ+YYLLP+N    S            + +   S   TPYRMS     N   
Sbjct: 61  FHNEELHGGQLYYLLPINTSTTSLNNTNNNNSINSLSSSTSSSKLTPYRMS---FDNQRM 120

Query: 129 KKRAAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVG 188
            KR++  EAEVFP+Y+STGVWKVKLVICPEQL+EIL Q  RTEELIE+VRTVAKCGNGV 
Sbjct: 121 LKRSST-EAEVFPRYNSTGVWKVKLVICPEQLAEILAQETRTEELIESVRTVAKCGNGVS 180

Query: 189 SA-ASSDHSSVAGSWKGSAMDK 197
           S+ A+SD SS++ S KGS+  K
Sbjct: 181 SSLANSDQSSLSSSRKGSSDQK 198

[Close]

BLAST of Cp4.1LG08g00320 vs. TAIR10
Match: AT3G61920.1 (AT3G61920.1 unknown protein)

HSP 1 Score: 141.0 bits (354), Expect = 8.2e-34
Identity = 93/199 (46.73%), Postives = 118/199 (59.30%), Query Frame = 1


Query: 9   MGNCVLKVAG------ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSI- 68
           MGNCV K  G      ++ D ++KVVT +GG+MEL+ PI AE IT E+PGH I  S S+ 
Sbjct: 1   MGNCVFKGNGGSRKLYDKDDSLIKVVTPNGGVMELHPPIFAEFITNEFPGHVIHDSLSLR 60

Query: 69  -FSEPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRA 128
             S PLLH +EL  G +YYLLPL+    +A  + D+   +STPYRMS             
Sbjct: 61  HSSPPLLHGEELFPGNIYYLLPLSS-SAAATAQLDSSDQLSTPYRMSF------------ 120

Query: 129 AEGEAEVFPKYSS--TGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAK-----CGN 188
             G+  +    S    GVWKV+LVI PEQL+EIL +   TE L+E+VRTVAK     CG 
Sbjct: 121 --GKTPIMAALSGGGCGVWKVRLVISPEQLAEILAEDVETEALVESVRTVAKCGGYGCGG 180

Query: 189 GVGSAASSDHSSVAGSWKG 192
           GV S A+SD  SV  S+KG
Sbjct: 181 GVHSRANSDQLSVTSSFKG 184

[Close]

BLAST of Cp4.1LG08g00320 vs. TAIR10
Match: AT1G64700.1 (AT1G64700.1 unknown protein)

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 65/196 (33.16%), Postives = 105/196 (53.57%), Query Frame = 1


Query: 9   MGNCVLKVAGERVD--VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLL 68
           MGNC+    G+  +  ++KV+  DGG++E Y+P+TA  ++  + GHA+F++  +  +PL 
Sbjct: 1   MGNCLFGGLGDEEEDLLIKVIKSDGGVLEFYSPVTAGFVSHGFSGHALFSAVDLLWKPLA 60

Query: 69  HKDELHAGQVYYLLP------LNPYKPSAKIEADAPSVVS-TPYRMS------------- 128
           H   L  GQ YYL P      L  +  S  + +++ S+ + TPYRMS             
Sbjct: 61  HDHLLVPGQSYYLFPNIVSDELKTFVGSCHVRSNSESLSAITPYRMSLDYNHRVLKRSYT 120

Query: 129 TCESQNAVAKKRAAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRT 183
              S+N+  + R  E +       S   +WKV L+I  E+L +IL +  RT ELIE+VR 
Sbjct: 121 DVFSRNSHIRTRQKEKKTRRRRTSSKGAIWKVNLIINTEELLQILSEDGRTNELIESVRA 180

[Close]

BLAST of Cp4.1LG08g00320 vs. NCBI nr
Match: gi|778676619|ref|XP_011650622.1| (PREDICTED: uncharacterized protein LOC105434805 [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 8.2e-60
Identity = 130/200 (65.00%), Postives = 150/200 (75.00%), Query Frame = 1


Query: 9   MGNCVLKVAG-----ERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFS 68
           MGNC+LK AG     E V+ +VKVVTV GGIMELY PITAECITGEYPGHAIF +RSIFS
Sbjct: 1   MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFS 60

Query: 69  EPLLHKDELHAGQVYYLLPLNPYKPSAKIEADAPSVVSTPYRMSTCESQNAVAKKRAAEG 128
           + L HK+EL  GQVYYLLPLN Y P+        SV+STPYRMST ESQ         + 
Sbjct: 61  DALHHKEELEGGQVYYLLPLNQYIPNHN-----HSVLSTPYRMSTAESQ--------TKP 120

Query: 129 EAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAASSDH 188
           +  +FPKY++ GVWKV LVICP+QLS+IL Q NRT+ELI+NVRTVAKCGN + SA++SDH
Sbjct: 121 DHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDH 180

Query: 189 SSVAGSWKGSAMDKPQYGLK 203
           SSVAGSWK    DKP YG K
Sbjct: 181 SSVAGSWK----DKPHYGFK 183

[Close]

BLAST of Cp4.1LG08g00320 vs. NCBI nr
Match: gi|1009142761|ref|XP_015888897.1| (PREDICTED: uncharacterized protein LOC107423784 [Ziziphus jujuba])

HSP 1 Score: 226.9 bits (577), Expect = 3.2e-56
Identity = 123/200 (61.50%), Postives = 140/200 (70.00%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  GE  +VVKVVT +GGIMEL APIT  CIT E+PGHAIF SR +FSEPLLH 
Sbjct: 1   MGNCVFKGFGEAEEVVKVVTSNGGIMELLAPITVNCITNEFPGHAIFRSRDLFSEPLLHS 60

Query: 69  DELHAGQVYYLLPLNPYK---------------PSAKIEADAPSVVSTPYRMSTCESQNA 128
           +ELH G++YYLLPLNPY                P A +E      V TPYRMS+C+S   
Sbjct: 61  EELHPGELYYLLPLNPYNKTKTTTTTTRANSKDPEATMEVKGS--VLTPYRMSSCDSGQG 120

Query: 129 VAKKRAAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNG 188
           +   R    EAEVFP+Y+S+GVWKVKLVI PEQLSEIL Q  RTEELIE+VRTVAKCGN 
Sbjct: 121 MNMMR-KRAEAEVFPRYNSSGVWKVKLVISPEQLSEILSQDARTEELIESVRTVAKCGNA 180

Query: 189 VGSAASSDHSSVAGSWKGSA 194
             S ASSD  SV+ SWKGS+
Sbjct: 181 ASSLASSDQLSVSSSWKGSS 197

[Close]

BLAST of Cp4.1LG08g00320 vs. NCBI nr
Match: gi|645254469|ref|XP_008233054.1| (PREDICTED: uncharacterized protein LOC103332137 [Prunus mume])

HSP 1 Score: 216.1 bits (549), Expect = 5.7e-53
Identity = 119/190 (62.63%), Postives = 140/190 (73.68%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  GE  ++VKVVT  GGIMELYAPITA  IT E+PGHAIF SR +F++PLLH 
Sbjct: 1   MGNCVFKGFGEAEEMVKVVTSSGGIMELYAPITANAITTEFPGHAIFKSRDLFAQPLLHN 60

Query: 69  DELHAGQVYYLLPLNPYKPSAK----IEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEA 128
           +ELH  ++YYLLPLNPYK + K    I A+    VSTPYRMS C+SQ  + K+     + 
Sbjct: 61  EELHPKELYYLLPLNPYKSTPKDHENINANPNGAVSTPYRMS-CDSQGLLRKR----ADP 120

Query: 129 EVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSAA-SSDHS 188
           EVFP+Y+S+GVWKVKLVI PEQLSEIL Q  RTE LIE+VRTVAKCG G  S+A  SD  
Sbjct: 121 EVFPRYNSSGVWKVKLVISPEQLSEILSQEARTEALIESVRTVAKCGTGGNSSAPGSDQW 180

Query: 189 SVAGSWKGSA 194
           SV+ SWK SA
Sbjct: 181 SVSSSWKESA 185

[Close]

BLAST of Cp4.1LG08g00320 vs. NCBI nr
Match: gi|596008376|ref|XP_007218479.1| (hypothetical protein PRUPE_ppa012029mg [Prunus persica])

HSP 1 Score: 215.7 bits (548), Expect = 7.4e-53
Identity = 119/190 (62.63%), Postives = 139/190 (73.16%), Query Frame = 1


Query: 9   MGNCVLKVAGERVDVVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLHK 68
           MGNCV K  GE  ++VKVVT  GGIMELYAPITA  IT E+PGHAIF SR +F++PLLH 
Sbjct: 1   MGNCVFKGFGEAEEMVKVVTSSGGIMELYAPITANAITTEFPGHAIFKSRDLFAQPLLHN 60

Query: 69  DELHAGQVYYLLPLNPYKPSAK----IEADAPSVVSTPYRMSTCESQNAVAKKRAAEGEA 128
           +ELH  ++YYLLPLNPYK + K    I  +    VSTPYRMS C+SQ  + K+     + 
Sbjct: 61  EELHPKELYYLLPLNPYKSTPKDHENINVNPNGAVSTPYRMS-CDSQGLLRKR----ADP 120

Query: 129 EVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCG-NGVGSAASSDHS 188
           EVFP+Y+S+GVWKVKLVI PEQLSEIL Q  RTE LIE+VRTVAKCG  G  SAA SD  
Sbjct: 121 EVFPRYNSSGVWKVKLVISPEQLSEILSQEARTEALIESVRTVAKCGTGGNSSAAGSDQW 180

Query: 189 SVAGSWKGSA 194
           SV+ SWK SA
Sbjct: 181 SVSSSWKESA 185

[Close]

BLAST of Cp4.1LG08g00320 vs. NCBI nr
Match: gi|743790595|ref|XP_011039224.1| (PREDICTED: uncharacterized protein LOC105135849 [Populus euphratica])

HSP 1 Score: 211.5 bits (537), Expect = 1.4e-51
Identity = 116/199 (58.29%), Postives = 143/199 (71.86%), Query Frame = 1


Query: 9   MGNCVLKVAGERVD-VVKVVTVDGGIMELYAPITAECITGEYPGHAIFTSRSIFSEPLLH 68
           MGNCV K     V+ +VKVVT +GGIMELY+PITAECIT E+PGHAI+ SR +FS+PL H
Sbjct: 1   MGNCVFKGFSLEVEEMVKVVTPNGGIMELYSPITAECITNEFPGHAIYRSRDLFSQPLFH 60

Query: 69  KDELHAGQVYYLLPLNPYKPSA---------KIEADAPSVVSTPYRMSTCESQNAVAKKR 128
            +ELH GQ+YYLLP+N    S           + +   S   TPYRMST ++Q  +   +
Sbjct: 61  NEELHGGQLYYLLPVNTSTTSLNNTNNNSINSLSSSTSSSKLTPYRMSTFDNQRML---K 120

Query: 129 AAEGEAEVFPKYSSTGVWKVKLVICPEQLSEILKQGNRTEELIENVRTVAKCGNGVGSA- 188
            +  EAEVFP+Y+STGVWKVKLVICPEQL+EIL Q  RTEELIE+VRTVAKCGNGV S+ 
Sbjct: 121 RSSTEAEVFPRYNSTGVWKVKLVICPEQLAEILAQETRTEELIESVRTVAKCGNGVSSSL 180

Query: 189 ASSDHSSVAGSWKGSAMDK 197
            +SD SS++ S KGS+  K
Sbjct: 181 GNSDQSSLSSSRKGSSDQK 196

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g00320 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG08g00320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3K9_CUCSA	5.7e-60	65.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116850 PE=4 SV=1	[more]
M5XDU0_PRUPE	5.2e-53	62.63	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012029mg PE=4 SV=1	[more]
F6I2X8_VITVI	3.7e-51	61.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0048g02650 PE=4 SV=...	[more]
A0A061DT80_THECC	8.3e-51	57.71	UvrABC system protein C OS=Theobroma cacao GN=TCM_005045 PE=4 SV=1	[more]
B9I940_POPTR	1.4e-50	58.42	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s10070g PE=4 SV=2	[more]

BLAST of Cp4.1LG08g00320 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G61920.1	8.2e-34	46.73	unknown protein	[more]
AT1G64700.1	2.1e-21	33.16	unknown protein	[more]

BLAST of Cp4.1LG08g00320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676619\|ref\|XP_011650622.1\|	8.2e-60	65.00	PREDICTED: uncharacterized protein LOC105434805 [Cucumis sativus]	[more]
gi\|1009142761\|ref\|XP_015888897.1\|	3.2e-56	61.50	PREDICTED: uncharacterized protein LOC107423784 [Ziziphus jujuba]	[more]
gi\|645254469\|ref\|XP_008233054.1\|	5.7e-53	62.63	PREDICTED: uncharacterized protein LOC103332137 [Prunus mume]	[more]
gi\|596008376\|ref\|XP_007218479.1\|	7.4e-53	62.63	hypothetical protein PRUPE_ppa012029mg [Prunus persica]	[more]
gi\|743790595\|ref\|XP_011039224.1\|	1.4e-51	58.29	PREDICTED: uncharacterized protein LOC105135849 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g00320.1	Cp4.1LG08g00320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 9..180 score: 1.3
None	No IPR available	PANTHER	PTHR33148	FAMILY NOT NAMED	coord: 10..191 score: 3.7
None	No IPR available	PANTHER	PTHR33148:SF9	SUBFAMILY NOT NAMED	coord: 10..191 score: 3.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g00320	Cucsa.259920	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g00320	CmaCh00G004710	Cucurbita maxima (Rimu)	cmacpeB013
Cp4.1LG08g00320	CmaCh06G009480	Cucurbita maxima (Rimu)	cmacpeB855
Cp4.1LG08g00320	CmoCh06G009710	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g00320	Cla021083	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g00320	Csa3G116850	Cucumber (Chinese Long) v2	cpecuB862
Cp4.1LG08g00320	MELO3C005951	Melon (DHL92) v3.5.1	cpemeB815
Cp4.1LG08g00320	CSPI03G07190	Wild cucumber (PI 183967)	cpecpiB864
Cp4.1LG08g00320	Lsi05G022180	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g00320	MELO3C005951.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g00320	CsaV3_3G007320	Cucumber (Chinese Long) v3	cpecucB1058
Cp4.1LG08g00320	Bhi01G000444	Wax gourd	cpewgoB1105
Cp4.1LG08g00320	CsGy3G007330	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g00320	Carg24185	Silver-seed gourd	carcpeB0145

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g00320	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g00320	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g00320	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g00320	Silver-seed gourd	carcpeB0194
Cp4.1LG08g00320	Cucurbita pepo (Zucchini)	cpecpeB482
Cp4.1LG08g00320	Cucurbita maxima (Rimu)	cmacpeB023