Csa3G116850 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTGAGGTGAGGTGAGGGGTTCCCTCTTAATTCAACGCTGCTTCTATTTGAATAACTAAAACCTCCTCTGCTCAAAATCAATATGCGTCCTTCCATCTCAATGCTTACCTTTGTATGTAAAATAGTAAATTCTAAATCGTAAGTCTCAGAGGGTGGACTAATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGATTTGTTTTCCTTTTTATGTCCTTTCCCTTACTTTGTAACATATTAGATTTCATTAGTTGCTCTCTCTCTCTCTCAGATGATCTTATAGATCATTTTGGTTTGTGTTTTAGCAATTCGAAATTCCTTAATTAGTACCAACGCAACTATAAGAAGAAAGGCCCAGGACTGGTCCAACTTTGTAAATAATTAATGTTCTATATTGATATGCATTAAAATGAAGGAAGTTCAAAGCGCT ATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGA ATGGGAAATTGCATGTTGAAAGGAGCAGGTGCAGGAGCAAGAGAAGAAGAAGTAAACAAAATTGTGAAAGTAGTGACGGTTGGTGGGGGAATCATGGAGTTGTATACGCCAATAACGGCGGAGTGTATTACCGGTGAATATCCAGGGCATGCCATTTTCAAGACCCGAAGCATATTCTCGGATGCGCTGCACCATAAAGAGGAGCTTGAGGGTGGCCAAGTCTACTATCTCCTTCCCCTCAACCAATACATTCCCAACCATAACCACAGTGTATTATCCACGCCCTATCGAATGTCCACCGCCGAATCCCAAACCAAGCCAGATCATGTAATGTTTCCAAAGTACAACAACGCCGGTGTGTGGAAGGTCAACTTGGTGATTTGCCCACAACAACTTTCACAAATTTTGTCTCAAAATAATCGCACTCAGGAGTTGATTGACAACGTCAGGACCGTAGCCAAGTGTGGAAACGCCCTCGAATCTGCTTCCAACTCGGACCATTCCAGCGTTGCAGGTAGTTGGAAGGATAAGCCCCACTATGGATTCAAATGA MGNCMLKGAGAGAREEEVNKIVKVVTVGGGIMELYTPITAECITGEYPGHAIFKTRSIFSDALHHKEELEGGQVYYLLPLNQYIPNHNHSVLSTPYRMSTAESQTKPDHVMFPKYNNAGVWKVNLVICPQQLSQILSQNNRTQELIDNVRTVAKCGNALESASNSDHSSVAGSWKDKPHYGFK*
BLAST of Csa3G116850 vs. TrEMBL
Match: A0A0A0L3K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116850 PE=4 SV=1) HSP 1 Score: 380.2 bits (975), Expect = 1.4e-102 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Csa3G116850 vs. TrEMBL
Match: B9I940_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s10070g PE=4 SV=2) HSP 1 Score: 192.6 bits (488), Expect = 4.3e-46 Identity = 102/195 (52.31%), Postives = 135/195 (69.23%), Query Frame = 1
BLAST of Csa3G116850 vs. TrEMBL
Match: A0A061DT80_THECC (UvrABC system protein C OS=Theobroma cacao GN=TCM_005045 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.1e-44 Identity = 98/199 (49.25%), Postives = 127/199 (63.82%), Query Frame = 1
BLAST of Csa3G116850 vs. TrEMBL
Match: I1KHQ0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G050100 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.5e-43 Identity = 102/193 (52.85%), Postives = 130/193 (67.36%), Query Frame = 1
BLAST of Csa3G116850 vs. TrEMBL
Match: I3S7W7_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.6e-43 Identity = 103/195 (52.82%), Postives = 135/195 (69.23%), Query Frame = 1
BLAST of Csa3G116850 vs. TAIR10
Match: AT3G61920.1 (AT3G61920.1 unknown protein) HSP 1 Score: 133.7 bits (335), Expect = 1.2e-31 Identity = 83/190 (43.68%), Postives = 114/190 (60.00%), Query Frame = 1
BLAST of Csa3G116850 vs. TAIR10
Match: AT1G64700.1 (AT1G64700.1 unknown protein) HSP 1 Score: 95.1 bits (235), Expect = 4.7e-20 Identity = 64/200 (32.00%), Postives = 99/200 (49.50%), Query Frame = 1
BLAST of Csa3G116850 vs. NCBI nr
Match: gi|778676619|ref|XP_011650622.1| (PREDICTED: uncharacterized protein LOC105434805 [Cucumis sativus]) HSP 1 Score: 380.2 bits (975), Expect = 2.1e-102 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 1
BLAST of Csa3G116850 vs. NCBI nr
Match: gi|743790595|ref|XP_011039224.1| (PREDICTED: uncharacterized protein LOC105135849 [Populus euphratica]) HSP 1 Score: 193.0 bits (489), Expect = 4.7e-46 Identity = 103/195 (52.82%), Postives = 136/195 (69.74%), Query Frame = 1
BLAST of Csa3G116850 vs. NCBI nr
Match: gi|566203501|ref|XP_002320898.2| (hypothetical protein POPTR_0014s10070g [Populus trichocarpa]) HSP 1 Score: 192.6 bits (488), Expect = 6.2e-46 Identity = 102/195 (52.31%), Postives = 135/195 (69.23%), Query Frame = 1
BLAST of Csa3G116850 vs. NCBI nr
Match: gi|1009142761|ref|XP_015888897.1| (PREDICTED: uncharacterized protein LOC107423784 [Ziziphus jujuba]) HSP 1 Score: 187.6 bits (475), Expect = 2.0e-44 Identity = 99/200 (49.50%), Postives = 129/200 (64.50%), Query Frame = 1
BLAST of Csa3G116850 vs. NCBI nr
Match: gi|590720840|ref|XP_007051440.1| (UvrABC system protein C [Theobroma cacao]) HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44 Identity = 98/199 (49.25%), Postives = 127/199 (63.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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