Cp4.1LG08g00220 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG08g00220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	GRAM domain family protein
Location	Cp4.1LG08 : 4423695 .. 4435849 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGATGGAATTCTTCGAAGTTAGGATGGGTTTATTGGTTCATTTTATAATATGTTCTCCCCCTGGTTCATAGTTCTATCAATAAAATTAGGTGAGGAATTATGAAAAATTGCTAAGCCACAACACTCCTGAATTCACATGCTGACAGTTTTTTCTTAAAAGAGGATGTCCATCGGCATGCAAAACTTGTACCACTTATTCAATGTCTAATTTGCATGAATAACTTCAATATCATGTTGTTATTCACATTTGAGCATGAACCTCACGATTCAATATTTGATTTCTTATTTCACTATTTTTCTTTAAAAAATACGGTTGTTGTCAAGGTTGGGTTGTTACTACATTTCTCTCTGTCTTGGATCTTGTTTATGATTCTTATTGTACTTCAGAAAATTATCCCATTACAAGAAATAACAGCTTTACGTAGAGCAAAGACCGCAGGGATATTCCCTAATGCCATCGAAATAATAGTTGGAGAGAAAAAGGTAGTTTTGATCTTTTAATGCTTTATATTTTCCATTCTGCTTTAATTTTTAATTTCATCTACAGAATTAAGTATAAGGTCTTTTTATTTTTCTCCTTTTCATTTTTAAAAAAATTATGATGATTTAGTAACACTTTTTTGTTATTTCCTAATCTACTTTCAAAATTAATTTTAAGAATAAAAGAAATATTGATTTTGAGAAAACCTTTATTTTTCTTTTTCTTTTTTTTTTTAAAAAAAAGAAGTGGGCTAAGGTTTCGTGAGTTTTTTACTTTTCGTGAGTTTTTTAAAAGTAAAAAACTAAACTACTTGTCAAAAAAAGAAAATAGTAATAATAATAGTACAGAAAAAGTAAACTAAGAAAATATTTAGGAGTATATATTATCAGCTTAACTTTTTAAAAAACAAAATGAACTAGATAATTTGTTTTAGTTGTTGGCAGTATAATCAACTAGCCTAAGTAACTTATTTTGCTCACTAACTTTTGCAGTTCTTCTTTGCATCTTTTCTATCTCGTGATGAGGCTTTTAATCTCATTAATGATGGCTGGTCGCAACAAGGTAAAGGTACCGAGGCAATTCTGACAAAACAGGTGAAGAACTGTGCATTCTATGTTTTGTTTGTAACAGCAGTATTGTTTAAGTTGCAATGCAACCAAAGTTTTCCCTTAGATTCTGCTAACATTAATATTCGATTAGATTGTTAGTGCATGTATAGAAAAGTGGATGGAGTGTTATCAATTTTTTGGATGGGCGATAACATTATTTTGACATATGGCGTAACTTAATATAGTGATATTCTTCTCTCTATGAGTTGCCCCCTATCCGTTCTATTTTAATTTTTCCCAGATGGTTTTAAGTTCGAGGCAATCATTTTTCAAGATCTTCCTGCTTATGTTTAATGGGCTTTCGGACCAAAATGATATCTTGATTTTGTGTTATTGATGGCCTTCTTTATTTGCCTGTGTACCGCATGTATGGCTGTGTGCATGTGCATGCCGACATGTCTGTATGTTTGTTTGCATGTTATGGATGTGTGAGCTTGCTAGCTTGCAATATGTTCACAAAATTCAGTTTCTGTATTTATGCATAAACTGTTACATTTGTTTAAAATTGACAATGAACCACCTAAGATATCAGTGATAGCAATGAAAAGTTTTTCTGGTTAGAAAACAACCCAAGTGAAAGAATGGAGACATTCTTTTTCAGCTTCTGTTTGTCTCTCTTATGTATTAAACTTTTTAACTTTTATGTTAGATATCAGTAAATGAATCTAGCAGACAAGAAATTAGTAACCTCGGTATCGAAAAGGCCAAGGAGCTGGATCCTTCAGATTCTTCTGACAGGTATTTTTCACCTTTGTCTATGTAGTTCCCCTAGGCTCTTTGCTGCTTGACTTACTAGATTAATAAATCATCTTGTGTCTAAGGAGTATGAATACTCCTATTCTTAATGTTTCCATGGTTCAAGCCAACGTTGAAGAGGAAAATGGGCCAAAGTCCCTACCACCCGTACCAACTGATGTAATTCAGGAAGCAGAGCCAATTCTTGATGCTCATGCTTCAACTTCAAGAAAGATGATGTGGAAGCAGGAAGACACAGAAGCTCCCAAGGGTGGGTTTGTAGCATTTAATTTCTCTTTTCTCTTTTCTCTTTCCTTTTAGATTAAGGAGTTAACCTACAGTTCTTGGATTGTGGAGTCCAAGAGTGTCTCAAGTCATTCTCTCTACCTTCATACTCACCATTGGCCTTTGGGAGGGGATGCAGAAATTAGTGAAATAAAACAAAAAGTTCTAAGAAACGTTATTCCTACTTTGATTGTTAGCTTATGTAGGAATTCATTTATTAGTTTTCTTAATGGGAAACCAAACTTTCCTTAAGACGAACAAAATAATGCACATAGGCACTTCAAGAAAGTGAAGGCCCATTGCAAAGGGAGCCAATTAAAAAGAGACACCCTAATAATTACAAAAAAAGAGGTTCAGTTGTAAAGAATAGGAGATAAGGGATAGTGACAAAAATCCTTAGATGCTAACACCCAAAGAGAGGCATGAAACCTGGTCATAGCCAGCCCACACTTCAAGACTTTTTGCCTCCTAGATTCTTCTGTTTCCCTCTAGCTAACGGTCGTACAAAGTAGTAAAAAAAATCTGCGTCCTAAAGGATGCCACCCTTATCTCCAAAACTGTGGATGGAACAACACCTCTTCTATCATTGACCAACAAAGATCAATTGTGCACCGAAGAAACGTGAAAGGTCTAAAAATTGGTTCCAAATCAAGTACCCATTGACCATGTCATAATACAGGATCTAGGTTGTTAAGTGTATAGAATCAAATGACGTGGTTCTATTTTCTACCTTTTTATTGTTGTAGCTTAGAGGGTATAATATTCCAAAGAAAGTTTGGTGGATTTCCTATTCCCTCTTTATCTTCATTACAGCTTGGTTCTTTGGAATAAAAAATTTTCTTCAATTTCTTATCAAAAGAAGTTATATACTGTATCATTCTCTGGAAAAGTTGTGCCTTTTCACGTGGAGGCTGTGAAGGGCAGGTGGGAATGGGGATTGTTTTGGTATTTGACATAAAGAGCTATTTTAATGAAAGAAAGCATTTTTAGGGTGCTTTTATTTTTACTTTAGTGGTTAACTTTTGTACTTGACTTTTACTTCCACTGCTATAACAAGTGAAACTCCGGTCCTGAATGCATGATCTGGTTTGATTTTGAATTGCAGTACCAGATTGTTATACCAAAGTTGCAGAATCAAAGTTCCCGGTACAGTTTCTTTGTCTTTGATGAGTTTGACATGTAATTTGTACTTCACATTTGGATCCTCCAAGTTCACAGTTTCTTTAACATTATTGATCAGTTTTGACCAGAAATGTTGGTTCAAATTGAACTGCAGATAAAGGTGGAGGATTTCTTTAGTTTCTATTTTTCAGATGACGCAGTTGATTTTGTTTCTTCATATCATGAAAAATGTGGAGATAAAGGTAGGGCGAAAGATGAATGCAATGTAGAAATATTTTTTGAATTGTTTTAACTATTGATACATAGTATATACTGTGAACTGATTGTTTGTTTGGCGATACTTTTCCAGAGTTTAAATGTTCTCTGTGGCGTACTGATGATGTGCTTGGGCCTACACGGGATATATCATTTCAACATCCAATAAAGATATATTTTGGTTCGCTTTTCTTTCTTTTAAGAGAATATCTGACTTTTTTCTCCATGTTTTTGTTTCTTTTTTATTTCAGTTATATTTTTATGATAGTTTTGATTTTACATGGCTATAAAGGTGCAAAGTTTGGTGGCTGTCAGGAGATCCAGAAGTTTCGAGTTTATCGAGACAGGTTTGACAAGTTGCTCCATAATGTTTATATTCTTTTGCTGGTCTTATCCCTCTCTAGTCATCTACATTCTTTCATGTCAGGTTTTGTTTCTGCCCTACGTTTGTTTTTGTATGTTCTGAATTACTTATAACAGACTCAAACTTGTATCAAAACTTTTATGGATCAATTCTGTCAGGTTTTATTTTTCGAGGCATTATATTAGAAAAAGGAAATAATAGTTTAGCATACAAGGGAATGTAAATAAAGCGAGTTACTTGGAACTCTAAATAAAAATGAAAACATCAACCGTAAACAAAATTTCACCGTTAGAAAAAACTATCATAAAAATTGCTAATTTTAATTCCTAAAATAATGTTAGTAATTGTCTCTGTTCTTGCAGCTGATTTTTTTCCTCCAAAAATTTTATAGTGTTGGAGAAGTGTTTTTGTCTTGAGGGAAATAAACTTGAAAGTGAAGATAAATACTTGACTTTTAGATTTAAAAAACTTATTTGGAGTGATAGATGATGCCAGATATGTTTAGGAAATAAAATTGAGATTTGGAATAAGATGAAATGGCATTCAGTTTATGTACCACAGTTTATTGTTTATTGGGAAAAAAAATTAAATATCAGAGTTGGTTTGATAATGATTTAGTTGTTCTTAAATGGTTAATGAGTTTGTTCTTTGCTTTCTCAAGGGTCATACAATTTTTGTTGTTTTATAATTTACTCATAAAAATTTTTATCATAGCCATATGTCATTTTTTTAAAGCTATAAGGATAGTTTTCAGTGATCTATTTTTAGTTTTTGTAAATTTGACCAAAATTTCAAGAATGCTTTTCGTAAATGAAAAAATTAAACAAAGGAATGGTTTGTAAACTGGCTAGATTTTGAGTATAGAAAACTAAAAATAAAAACTTTATCAAGGGGGCCTTTGTTGCTATTTTCTATGGAAATGGAAATCATTTCAAATTTACGGTTACTTTTAATAAGAAACAACACTTTTCATAGAACAAATGAAAAGAGAATAATGCTCAAAAGATATAGACTCTATCGGGAGAACAAAAAGAAAAGGGAAACTCAATCAATAAAAACCAACAGTACAGAGAATTAAGGAAAAACAAAGGCAACACTTTTTAAATTACGGTCTAAGTATATGATTCTGAATATGTCTAAAAGTTCTCATTGTTGAACAAACATTATGTTGAAATAGAGCTCTCACATTCTCAGTCAAAATGATAACTGTGAGCAGTAAAATGTTTCTTAATACAACCACCTTTAGTTGGACTAATGGTTATTGAAATTTTAGGAAAAGGGTTCAAATCCATGATAATCACCTGCCTAGGATATTATAATCCTACAAGTTTCCAGATGACCATATCCCGAGGCTAATCTCGTTGCATACAAGCTGGTCCAAATGGTCACATTTGTTTCTTAATATTCTTGCTAGGAATTGATGTTGATGCCTTTAAACTCATGAAAAATACTTTCAGCAGGAAACATTCTTTCACCAGTGAAAAAATAAAAAAGTATGGATAAGATATCCTCTCTAAGGGCCAAGGGGTTACAAAAAAGCATTCCAATGGGCAAATATAAGAAAAAACTAATAATGGATAAAATATCCTCTCTAGGGGCCAAGGGGTTACAAAAAGGCATTCCAATGGGCAAATATAAGAAAAAACTAATAATTACAATTGCTTGTAGACCACCAAGTCAAAGCTTTCACATTCTCCCTGAAGTTGTCACTCTTCATTAGTGACCTGGTGAATCCTCTCATTTACTCTAACAAAATCCGTAACATAATGCTTGGTAAAAGCAAGTTACATGTGTTAGACCTCCAATCCAAAGGGTTTATTCAAGGAAAGGCAAACCCGGAAATGTGACTGTTTTAGTTAGTTTCCTTGTTTGAGTATTTTGGATTAGGGAGTTATAACTCCTTGAGTCAGTTATGTTGGTTTTGATATTTTGTTTATATGCTGTGTTTTTGTAATGACCGAGCATGATCTTGCATTTTATGTGGTTTCTTGAGGAATGTGGAGAGATTGATGGCCCTCTCAAACTTGTTATTAGGAAATGAGTGTTTGTTGTATTTTCTTTGTGAATTTTGTGAATAGAAAGTGGATTCCTATCAACATGCATGTTCAGTTTTATTATGAGAAAACTGAAAAAAAGAATTGTCAAAATATGTGAAAGTTTTCTCATAATGAATCTCATTATTATACCAGTACGTGTAGCTAGCTTCCTGTAGGCTCTGTCAATGGCACAAATCATGATGGTTTAAAATTGTAAAATTAAACTGAGAATTTCATGATTAGCAGAGCATGATGGTTGATGTCTTCTGGTTACTCGGTATTACGGATGATNATGATGGTTTAAAATTGTAAAATTAAACTGAGAACTTCATGATTAGCAGAACATGATGGTTGATGTCTTCTGGTTACTCGGTATTACGGATGATGTCTTAGATTGGCTACTTAGATCTCATACAGGAATCTTTACTGTGGAAAAAGTAGATTCCATAGCGCCTCTTACTATGCATGTTGGCTTCCACAACAAATTTGTGGTCTGGAAGGTGCTGATTTTAGAAATTTGACTAAAGCACAGGGACCAAACTAAAACTTTTGAAACCATAGCAATAGCATGATTTTAGAAGTTTGATTAAAGCATAGGGACCAAATTAAAACTTTTGAAACCATAGCTACTAGGCTGAAACTAAATCCAAATCATAGGGATTAAATTGAAACTAGCCTAAATCATAGGATCGAAAATTTTAAAATCATAGATATCTAATTAAACTTTGCCCAATCCATACCGATCAAATTTGTAATTTAACCTGTAAGACAATAAGACATTTATTTGAGCCATTAAATACTAGTATGGCAGATATTCAAAATAAATAGTGATGGAACAGATTTGTTTCCCTATCTCTTCCATATCACAAGAATATAGTTTTGGTTGCACAGTAAGGTTCTGGTTTAATGTTTTGATGAAAGTATATTATGTGTCCAAGCATGCATGCATGCATAATCAAGGCTTGCCATTATAGATCTTGTTCATGTGGGCTTCTATCTGATTCAAAGTTAAGAGAGGAAGGGTTGGATTACACAACATTTCCTTCATGAAAAATAAGTGGAACCAGTTCGGGACGACATATCATGATTAATTAAATACCTTAGTGTCCTGTATGAAGTTCTCTTAGGTCTTTTACCAACTTTTCAACTTGCCGGGTTACAAAATTAACAATGTACGTGACTTCCTCCGGCCTCTTAGGCAAAGATAGGCATTATTTCACCTTTGCTTCACATTGCACACTCTTTGGTAAATCCAGGTCGTGGTATGGGTCTCGTCTAACCAAGCTAAATATGCTTTCTAACCATAATACTGCTCATTCTTTCTTTAGTTTCTAACTTTTAGGGTTAAGGTAAGGCAGATGGTTGATTGCCCATCTGATTTAATTACTACGTTGATATGTTGTTGCTGAACTAATGCAGCCCCTATTTGGGCTTTAAGTTTCTGTCATCTATAACTTTTCTGACTAATTAGCAATTTTTGTTTATTATTTTATTATTCGAGCCAGTTTTCTGTTGTCAATGCCTTCAATGAGTTTAACTCTCTGCGCATTTTCTCAGTCATTTGGTCATCGAGGTAATACAAGAAGTCAGTGATGTTCCATATTCAGATTATTTCCGTGTTGAGGTATTAACTAGAACTTTCAGTTCTATTCGATCCATTTGGTGGCAATTATCTCTATACTGTTTTGGGTCATAATTTCTTGACGAGGAAATTTAACGATATATTAGAAAAGATTAAAACATATCAGCGTTTATATGTACTCGCAAGACTTTAGATTATATGTTATTTGTTGAGGACAATCTTAAATATTGCAATCAAATATCCATCATTATTTCAGAAGATTTAAAAAAAGAAAAAAGAAAAAAGAAAAAAACTCTATTCAGGTACATATCTCTCTTTGGTTCGTCAAATGTTTCTTTCATTGGTGTGACTTAAAATTGTCTTTGAATCTAGCTAAGCAGACCCACATTTCTCATTATATAAAACAGTCATTTCTTAGTTTTCCTACGTAATTATCAAGTGCTTATTCTTCATGGTTATTAAGTGTCTCCCTGCATAAATTTTAGGTTCATTGGGAGGTGAAGAATGATGTCGATGAATCAACTAATGGCTGCATCTTGAATGTATATGTGAACGTGGCATTTTCAAAAAGAACAGTTTGGAAAGGTATGTCTATTTGTACGAACATTTTGTGATTTTTATCATATGGTGATTAGTTCTTTAGAAATTTGGTGAGGAATTAAAAATTCATTTCTTAGATTTTTCCCTCTAAATATTTGTCCGTTCACTCAATATCATGAGTTACTTTTAGTGTTTATTGGTAGTGAAAGGCTAGTTGAAAAATGTTAGAATATGAGGGACTAAAATGAATCTTTTTAAACAAGAGGAACTAAATTGAAAATTAGTGGGACTGATAAGTTTTATATTCCTACTTCGATGTTCCATCATCCTGGGGGCCATTTTGCAAAGCCTTCCCTACAATAGATTTTTCCCTCTAAAACCTGCCAGTTCACACAATATCATTTCATGAATCACTATTTAGTGGGATATAAATAGATGATACGTTTGATATTCATACTAACATTTTCTATCAACACTGGGGCCATTTTGCGAAGCCTTCCCTACAAGTTGTCCACTTCTAATTATTCCTTGACGAACCAAGGTCTAGGTTGAGTTGCGTGTTAGTGGGATATAAATATATGTTTACTTTGATATTCAAACTCATGGATCTGTTGATTGAATGGTGGGAAGATATTCACTTTGACATGCAGGATAGACTAGCAAGAGCTACTTCGTTTGTTGCCAAGAATGAACATTATAGAAATGTTGACATTTCTTGCAGAAAATATGGACTTGATTTGACCATTATAAGAAAAATGCTTCTTATGCTGGAGTACCACTATTGAGGTACCATTTGAATGTAGGGAAAACTTTGAATCAACTATTTATGTAAATTGAGGAAACCGCTAGAGGGGTTTAAACGATCTTCAAAGGCATAGTTTGGACAATTCAGTGTTGACCCTTTTATCATTCTTATCGAATTTACATTCAGGACAATAAGTTAATGTTCTCTCATATGAGATGGTGAAAATGTTAAGGAGCAAAATTAAAGAGAGGAACTTATAAGTTATAACAATAAAAGTACGTGGCACATCTGTTTAAGGAACTGTCTTCTTTTCGAGATGTGAGTTGTCTATACGGCGGTTATTGTTTATGTGGAATGTTATTGCGGTCAACCACAGNTTAAGGAGCAAAATTAAAGAGAGGAACTTAAAGGAACTGTCTTCTTTTCGAGATGTGAGTTGTCTATATGGCGGTTATTGTTTATGTGGAATGTTATTGCGGTCAACCACAGTAGGTATAAAGAAGTTCTGAAGCATACCAATTATTAAATTTTCTTTTCTTCTCTGTTTTTTTCTTTATCTTCTGTTAGAAGTCTGCATTTAAATTCCTACGTGTGTTTTTTTTTTCTCATCCGTGAGGCATGTAGTAATTTCTTATTTGAGTAAATGGTTTTCAGAATATGATGCTGCTGATTTAATGATGAGTTTTGTGGATCATCATGCAGGGAAAATAGTACAGTCTACTCTTGAAGAATGCCGAGAGGCCTATGGACTGTGGATTCAGATGGTATCCTTTTTTCCCTTACATATTTGGCAAGTGTTAATCAAATTTAAAGTGCTATTCAAATTTGTACGACATTCTTGCAGGCAAAGGAATTGTTGCAGCAGAAACTTAAAGAAATTAAAGGTCTGAATGTTATATAATTTTACTTTTCGTCTAAACAGTCATATTCAAATTAGGCAATTGATGAGCTCACACGTTCTGGTTACTAATTTACCACAGAGGGAAGACCAAGGGGTAGCACTTCGGGGAGTGGTAAAAATCCTCCTGTTGAAGAAGAAATAAATAGAAGCAAATCATTGGAAAAGTCAAATGAGATGAACGACCAAAGAAGATTAACTGAATCACAATTTTCCACTGACGTTGGTCAACAACCTGAAATCCTTTCTCAAGGAGTTGATTCTACTTCACATGCTTCTTGGTGGAGAGAATACGTGAAGAAACTTTGCTCTTTGTTACGAAGTCAAAATTATCTTCCCCTTGCCCTAGTTATCTCGTNTCTTGCCCTAGTTATCACGTTTGTTGTGATATTTCTAATGCAGGTATGCAATTTCTTTTACTTAGTATACCTATATCTTCTGTCATTGAATTTGCACCGGTATCCATGAATATGATTTCCAATATGATATCTGTCGGGCACCTGGCTTCTATTTTTCATTTTTGTTCGTCTAATATACAGCAAATCTTTGATGGTATCTCTGCAAGTACCCCAGCTTTTTTTCTCTCTCTCTCTCGCACCTATTCTTCTTGTGCTACCGCCAGATTTTAATTCATTTAATTTAAAATGGTGAGAACCCGTTACTAACCTATGATGAGAAAAAAACTACCTACCTCAATCGACTCCGTTCCTCTCTCAGCCATATCCATCCGTTTCCTTTCCCTCTCAAACCCATTTAGTTCTTATTTATCATTACATATTTCGAACCTCTTCTTTGCCTCTTAACTCTATTATTTATAGTTTATATATTTCTCATTCATATTTTCTTTGAATTTCAAGTCTGGAATTATGTCTAGGATGGAAGCTACGTTATCCATTTATGCTTCCTATTGGTAATCTGAAACTTATGGATAATGGTAAATGGCGGCAGTCGCGTTTGTTTGATAGGTTGTCTAAATTTTCCATTTGAGCCGAGCGTACATCAGATGATACGTTCATCTGCATTGGGATAATAATCTATGAGGTAAGAAGATATTGAACAGTTGTGTTGGGACGGACAGGCATATTTTAACTGAACTTGAACAAAATGTGAATGTTCCCAAATTTGAGCAGAATCAATGTTACTCGGCCTAGTTGGCTGAGCAGTATGTGTTCTATTCCCCCTCGTTAAGGCACGCAGCTTTTATCTCTCAAGTTTTTGTCCTGGGAATAGAAGGCTCATCTCCCTCACTTGTCTACTTTTGAAGTCTTCAAAGACCAGGAAGATCCTATTGCATGTATTTATCCATGTTGTGTGTGTATTGTTATGGTATCAGAAATAGGTGGTTTCATNCCATCACTATCCTCGGCACAGAAGAAGTCGAGTGCTGTAGGGCAGAGTATTTGCATCGGTCAAAGGAGACGGTGTATTAGGGAAAATGTAGTCAACCTAATTGATAGAGATCAAATTTCATTAAACTATTACAGGAATATTTAGCAAACGTCAAAATATTTATATAGGTTTAGGTAAGGTTTGGACTTTTGAAGTCTTTAAAGACCAGGAAGATCCTATTGCATGTATTTATCCATGTTAGGCTAGGATGACTTCTCTGTTGTAGTTTAATAAAAGTTTCAATTATTTGAATTCTATTATGAGAATTTTGATATATTAATTAATCGTTGAAAAAAAATCATTTCTAGTTGGTATAGATGTAGAAAATGGAAACATTTATTGATTGTAGAAATATTAACCGACATTGTAAACTGTTCTTCGTTGTGTGTGTATTGTTATGGTATCAGAAATAGGTGGTTTCATTGCAGAATCCATCTTTTACTTTTATAATGTTGAGGTAGTTGTATCTTATGAACGTTTGATCGATTTATTTGCCACTCCATTTCAGTTCTGTAGACATTTTGAATCTTTTTCCAATAAATGTCGAATAATTATGCTATTTCTTAACTGCAGTTGAGCATAGTGGTGCTATTATCCAGACCCCAACACATCCACATGAGTTATCCTGACAATGCAAGTGGCCTCAAATTCAGTGGTGGAAGATCGCCTGATGCCATGGCATGGTTGGAAAAGCGAATGCACCACCTTAAGGATGAGATGAACATGGTTGAGGCTAGGCTGGAGATGATGCGACGCGAGCATGCACAGTTAAAAGCACAACTAAGAGATCTTGAAGAAGTTAAATGGTAAACTTTAATTTAATTTATTTTTTCAATTCCTCTTTGAGATTAATTTATTGTATGTTTGTTTTGATGATTGGAAATGATGATCCCTCGTAACAAAGGGGAAAGAATTGAAATACAACCCAACATGTGAAACCGAAATGATTCTCAGGTGATGATAAACCATGGGAACATTTCTTTACTAGAAACTGGATTGGTGTAATATAAAGATGAGATGTCCTTGATCCACAAATGTGATCCCTCATTCTCAAATAATATTTCGCACAAAATTGCAACCATTTTACTATTTGTCCCCTAAAAGAAGCTTTACA

mRNA sequence

TAGATGGAATTCTTCGAAGTTAGGATGGGTTTATTGGTTCATTTTATAATATGTTCTCCCCCTGGTTCATAGTTCTATCAATAAAATTAGGTGAGGAATTATGAAAAATTGCTAAGCCACAACACTCCTGAATTCACATGCTGACAGTTTTTTCTTAAAAGAGGATGTCCATCGGCATGCAAAACTTGTACCACTTATTCAATGTCTAATTTGCATGAATAACTTCAATATCATGTTGTTATTCACATTTGAGCATGAACCTCACGATTCAATATTTGATTTCTTATTTCACTATTTTTCTTTAAAAAATACGGTTGTTGTCAAGGTTGGGTTGTTACTACATTTCTCTCTGTCTTGGATCTTGTTTATGATTCTTATTGTACTTCAGAAAATTATCCCATTACAAGAAATAACAGCTTTACGTAGAGCAAAGACCGCAGGGATATTCCCTAATGCCATCGAAATAATAGTTGGAGAGAAAAAGTTCTTCTTTGCATCTTTTCTATCTCGTGATGAGGCTTTTAATCTCATTAATGATGGCTGGTCGCAACAAGGTAAAGGTACCGAGGCAATTCTGACAAAACAGATATCAGTAAATGAATCTAGCAGACAAGAAATTAGTAACCTCGGTATCGAAAAGGCCAAGGAGCTGGATCCTTCAGATTCTTCTGACAGGAGTATGAATACTCCTATTCTTAATGTTTCCATGGTTCAAGCCAACGTTGAAGAGGAAAATGGGCCAAAGTCCCTACCACCCGTACCAACTGATGTAATTCAGGAAGCAGAGCCAATTCTTGATGCTCATGCTTCAACTTCAAGAAAGATGATGTGGAAGCAGGAAGACACAGAAGCTCCCAAGGTACCAGATTGTTATACCAAAGTTGCAGAATCAAAGTTCCCGATAAAGGTGGAGGATTTCTTTAGTTTCTATTTTTCAGATGACGCAGTTGATTTTGTTTCTTCATATCATGAAAAATGTGGAGATAAAGGTGCAAAGTTTGGTGGCTGTCAGGAGATCCAGAAGTTTCGAGTTTATCGAGACAGTCATTTGGTCATCGAGGTAATACAAGAAGTCAGTGATGTTCCATATTCAGATTATTTCCGTGTTGAGGTTCATTGGGAGGTGAAGAATGATGTCGATGAATCAACTAATGGCTGCATCTTGAATGTATATGTGAACGTGGCATTTTCAAAAAGAACAGTTTGGAAAGAATATGATGCTGCTGATTTAATGATGAGTTTTGTGGATCATCATGCAGGGAAAATAGTACAGTCTACTCTTGAAGAATGCCGAGAGGCCTATGGACTGTGGATTCAGATGGCAAAGGAATTGTTGCAGCAGAAACTTAAAGAAATTAAAGAGGGAAGACCAAGGGGTAGCACTTCGGGGAGTGGTAAAAATCCTCCTGTTGAAGAAGAAATAAATAGAAGCAAATCATTGGAAAAGTCAAATGAGATGAACGACCAAAGAAGATTAACTGAATCACAATTTTCCACTGACGTTGGTCAACAACCTGAAATCCTTTCTCAAGGAGTTGATTCTACTTCACATGCTTCTTGGTGGAGAGAATACGTGAAGAAACTTTGCTCTTTGTTACGAAGTCAAAATTATCTTCCCCTTGCCCTAGTTATCTCGTNTCTTGCCCTAGTTATCACGTTTGTTGTGATATTTCTAATGCAGTTGAGCATAGTGGTGCTATTATCCAGACCCCAACACATCCACATGAGTTATCCTGACAATGCAAGTGGCCTCAAATTCAGTGGTGGAAGATCGCCTGATGCCATGGCATGGTTGGAAAAGCGAATGCACCACCTTAAGGATGAGATGAACATGGTTGAGGCTAGGCTGGAGATGATGCGACGCGAGCATGCACAGTTAAAAGCACAACTAAGAGATCTTGAAGAAGTTAAATGGTAAACTTTAATTTAATTTATTTTTTCAATTCCTCTTTGAGATTAATTTATTGTATGTTTGTTTTGATGATTGGAAATGATGATCCCTCGTAACAAAGGGGAAAGAATTGAAATACAACCCAACATGTGAAACCGAAATGATTCTCAGGTGATGATAAACCATGGGAACATTTCTTTACTAGAAACTGGATTGGTGTAATATAAAGATGAGATGTCCTTGATCCACAAATGTGATCCCTCATTCTCAAATAATATTTCGCACAAAATTGCAACCATTTTACTATTTGTCCCCTAAAAGAAGCTTTACA

Coding sequence (CDS)

ATGAATAACTTCAATATCATGTTGTTATTCACATTTGAGCATGAACCTCACGATTCAATATTTGATTTCTTATTTCACTATTTTTCTTTAAAAAATACGGTTGTTGTCAAGGTTGGGTTGTTACTACATTTCTCTCTGTCTTGGATCTTGTTTATGATTCTTATTGTACTTCAGAAAATTATCCCATTACAAGAAATAACAGCTTTACGTAGAGCAAAGACCGCAGGGATATTCCCTAATGCCATCGAAATAATAGTTGGAGAGAAAAAGTTCTTCTTTGCATCTTTTCTATCTCGTGATGAGGCTTTTAATCTCATTAATGATGGCTGGTCGCAACAAGGTAAAGGTACCGAGGCAATTCTGACAAAACAGATATCAGTAAATGAATCTAGCAGACAAGAAATTAGTAACCTCGGTATCGAAAAGGCCAAGGAGCTGGATCCTTCAGATTCTTCTGACAGGAGTATGAATACTCCTATTCTTAATGTTTCCATGGTTCAAGCCAACGTTGAAGAGGAAAATGGGCCAAAGTCCCTACCACCCGTACCAACTGATGTAATTCAGGAAGCAGAGCCAATTCTTGATGCTCATGCTTCAACTTCAAGAAAGATGATGTGGAAGCAGGAAGACACAGAAGCTCCCAAGGTACCAGATTGTTATACCAAAGTTGCAGAATCAAAGTTCCCGATAAAGGTGGAGGATTTCTTTAGTTTCTATTTTTCAGATGACGCAGTTGATTTTGTTTCTTCATATCATGAAAAATGTGGAGATAAAGGTGCAAAGTTTGGTGGCTGTCAGGAGATCCAGAAGTTTCGAGTTTATCGAGACAGTCATTTGGTCATCGAGGTAATACAAGAAGTCAGTGATGTTCCATATTCAGATTATTTCCGTGTTGAGGTTCATTGGGAGGTGAAGAATGATGTCGATGAATCAACTAATGGCTGCATCTTGAATGTATATGTGAACGTGGCATTTTCAAAAAGAACAGTTTGGAAAGAATATGATGCTGCTGATTTAATGATGAGTTTTGTGGATCATCATGCAGGGAAAATAGTACAGTCTACTCTTGAAGAATGCCGAGAGGCCTATGGACTGTGGATTCAGATGGCAAAGGAATTGTTGCAGCAGAAACTTAAAGAAATTAAAGAGGGAAGACCAAGGGGTAGCACTTCGGGGAGTGGTAAAAATCCTCCTGTTGAAGAAGAAATAAATAGAAGCAAATCATTGGAAAAGTCAAATGAGATGAACGACCAAAGAAGATTAACTGAATCACAATTTTCCACTGACGTTGGTCAACAACCTGAAATCCTTTCTCAAGGAGTTGATTCTACTTCACATGCTTCTTGGTGGAGAGAATACGTGAAGAAACTTTGCTCTTTGTTACGAAGTCAAAATTATCTTCCCCTTGCCCTAGTTATCTCGTNTCTTGCCCTAGTTATCACGTTTGTTGTGATATTTCTAATGCAGTTGAGCATAGTGGTGCTATTATCCAGACCCCAACACATCCACATGAGTTATCCTGACAATGCAAGTGGCCTCAAATTCAGTGGTGGAAGATCGCCTGATGCCATGGCATGGTTGGAAAAGCGAATGCACCACCTTAAGGATGAGATGAACATGGTTGAGGCTAGGCTGGAGATGATGCGACGCGAGCATGCACAGTTAAAAGCACAACTAAGAGATCTTGAAGAAGTTAAATGGTAA

Protein sequence

MNNFNIMLLFTFEHEPHDSIFDFLFHYFSLKNTVVVKVGLLLHFSLSWILFMILIVLQKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGTEAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPKSLPPVPTDVIQEAEPILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFFSFYFSDDAVDFVSSYHEKCGDKGAKFGGCQEIQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVNVAFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIHMSYPDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLEEVKW

Homology

[Close]

BLAST of Cp4.1LG08g00220 vs. Swiss-Prot
Match: VAD1_ARATH (Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VAD1 PE=1 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.1e-82
Identity = 216/539 (40.07%), Postives = 301/539 (55.84%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP  EI+ ++RAKTAGIFPNAIEI+ G KK+FFASFLSRDEAF LI+DGW + G   
Sbjct: 121 KKIIPFAEISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEYGSAV 180

Query: 118 EAILTKQISVNESSRQEISNLGIEKAK-ELDPSDSSDRSMNTPILNVSMVQA-NVEEENG 177
           ++    +I V E    ++S+  +++A+  +D ++  D  +    L++S   +  V  +NG
Sbjct: 181 KS--EGEILVTE---PQVSDGVVKRARSSMDLANELDIPVRDETLHLSSSSSLPVISQNG 240

Query: 178 PKSLPPVPTDVIQEAEPILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIKVEDF 237
              +P  P+ V + AEP +D  A+ +    WK EDT+APK+   +TKVAE+KF I VE+F
Sbjct: 241 ---VP--PSSVQRHAEPDVDVVAANT--FNWKPEDTDAPKLSSDFTKVAEAKFSIPVEEF 300

Query: 238 FSFYFSDDAVDFVSSYHEKCGDKGAKFGGCQEIQKFRV---------------------- 297
           F  +FSD AV FV S+H+ CGDK  +    Q  +K                         
Sbjct: 301 FRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPIKIYFGAKFGGCQ 360

Query: 298 -------YRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVNVAFS 357
                  YR+SHLVIE  QE+SDVPY+DYF VE  W++K D  +S  GCIL+VYVNVAFS
Sbjct: 361 ESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRDSVEGCILDVYVNVAFS 420

Query: 358 KRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRP 417
           KRTVWK                GKIVQSTLEECREAY  WI+MA ELL+QK  E +EG  
Sbjct: 421 KRTVWK----------------GKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEG-- 480

Query: 418 RGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSH 477
                    N  +E+    +   E+ +E +++ ++             E++ +GV   S 
Sbjct: 481 ---------NKLIEDGEPLAAREERVSECDEEGKV-------------EMVGEGVVKKSL 540

Query: 478 ASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIHMSY 537
              W      L S ++ Q+        +   +V+ F VI LMQ++IVVLL +     + Y
Sbjct: 541 KEAW----VNLTSFVKRQSG-------TRQVIVLAFAVILLMQVTIVVLLKKGGGGQVEY 592

Query: 538 PDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLEEV 566
            +       +G    + + WLEKRMH L++EM MVE RL+ MR++HA LKAQ   LE +
Sbjct: 601 HERYDEYSVNG----ETLGWLEKRMHFLREEMMMVEDRLQRMRQDHAALKAQFHHLERL 592

[Close]

BLAST of Cp4.1LG08g00220 vs. Swiss-Prot
Match: YSP2_YEAST (Membrane-anchored lipid-binding protein YSP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YSP2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.0e-07
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 1


Query: 61  IPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQ 113
           IP +EI  + +  TAGIFPN I I     K+ FASF+SRD  F+LI D W+Q
Sbjct: 704 IPFKEIVQIEKKTTAGIFPNGIVIDTLHTKYIFASFMSRDATFDLITDVWNQ 755

[Close]

BLAST of Cp4.1LG08g00220 vs. TrEMBL
Match: A0A0A0L3J6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116750 PE=4 SV=1)

HSP 1 Score: 699.9 bits (1805), Expect = 2.5e-198
Identity = 390/539 (72.36%), Postives = 422/539 (78.29%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EITA+R+AKTAGIFPNAIEI VGEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 125 KKIIPFREITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EAI+ KQ S+NESSRQEI  LG+EKAKELDPSDSSDRSM+TPILNVS+VQANVEE N P 
Sbjct: 185 EAIMKKQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPT 244

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P    QEAEPILD HASTSR+ +MWK EDT+AP VPD YT+VAESKFPI VEDFF
Sbjct: 245 TLPPEPIVATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 304

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD AVDFVSSYHEKCGDK                             GAKFGGC E
Sbjct: 305 SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 364

Query: 298 IQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDV-DESTNGCILNVYVNVAFS 357
            QKFRVYRDSHLVIEV QEVS+VPYSDYFRVE HWEVK DV DES N CIL VYVNVAFS
Sbjct: 365 TQKFRVYRDSHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNVAFS 424

Query: 358 KRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRP 417
           KRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +EG  
Sbjct: 425 KRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEEG-T 484

Query: 418 RGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSH 477
           RGS S SG++  +E+E N +KSLE SNE ND+RR TESQ+STDV QQ +   QGV+STS 
Sbjct: 485 RGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDVDQQAKNSIQGVNSTSA 544

Query: 478 ASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIHMSY 537
           ASW REY KKL  +LRSQNYLP       LALVITF VIFLMQLSIV+LLSRPQHIH+S 
Sbjct: 545 ASWLREYTKKLWIVLRSQNYLP-------LALVITFAVIFLMQLSIVMLLSRPQHIHVSS 604

Query: 538 PDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLEEV 566
           PD   GLKFSGGRS DA AWLEKRMHHLKDEM MVEARLEMMRREHAQLKAQLR+LEE+
Sbjct: 605 PDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELEEL 639

[Close]

BLAST of Cp4.1LG08g00220 vs. TrEMBL
Match: A0A061DUJ5_THECC (GRAM domain family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005713 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 6.4e-117
Identity = 260/544 (47.79%), Postives = 334/544 (61.40%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP  EIT+++RAKTAGIFPNAIEI  G +K+FFASFLSRDEAF LINDGW Q G G 
Sbjct: 125 KKIIPFNEITSVKRAKTAGIFPNAIEIFAGGRKYFFASFLSRDEAFKLINDGWVQHGNGA 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKE----LDPSDSSDRSMNTPILNVSMVQANVEE- 177
           + I  +Q  ++ESS QE   + IEK       ++  +S DR  + P  + S + +N E  
Sbjct: 185 KEIRDQQEPMSESSSQENGFVAIEKVNSSKNLINDMESIDRDEDVPTSSDSKLPSNSEND 244

Query: 178 -ENGPKSLPPVPTDVIQEAEPILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIK 237
            E GP+S+             I+   ++++    WK E+ +APKVP+ +TKVAE+KFPIK
Sbjct: 245 AEAGPESV-------------IITRSSASADTCSWKPENCDAPKVPEDFTKVAETKFPIK 304

Query: 238 VEDFFSFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKF 297
           VE+FF  YFSD+AV+F+ S+H +CGDK                             GAKF
Sbjct: 305 VEEFFKLYFSDNAVNFIESFHRRCGDKEFRCSSWCSHDKFGHVRDVSFQHPIKIYFGAKF 364

Query: 298 GGCQEIQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVN 357
           G CQE QKFRVYR+SHLV+E  QE++DVPY DYF VE  W+V+ D+D    GCIL VYVN
Sbjct: 365 GSCQETQKFRVYRNSHLVMETSQEINDVPYGDYFHVEGLWDVERDIDGPQEGCILRVYVN 424

Query: 358 VAFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIK 417
           VAFSKRTVWK Y              GKIVQSTLEECREAY  WI MA EL ++ L + +
Sbjct: 425 VAFSKRTVWKAYG------------TGKIVQSTLEECREAYATWIDMAHELFKESLDK-Q 484

Query: 418 EGRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQG-- 477
            G     +S       +E E+   +  E+S+ ++D  R      S DV Q+   L QG  
Sbjct: 485 GGVDSSRSSAENGELQIEREVATKEPSERSHNLSDPVRTLRMSDSLDVNQRIGTLLQGSL 544

Query: 478 VDSTSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQ 537
             ++S AS  RE+V+K  S L SQ ++ L L ++       F VIFLMQ+SI+VLLSRPQ
Sbjct: 545 SSASSIASLLREFVRKSYSYLTSQGHISLVLAVA-------FAVIFLMQVSILVLLSRPQ 604

Query: 538 HIHMSYPDNASGLKFSGG--RSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQ 563
           HIH+SY   ++G    G   R  +A+AWLEKRMHHLK+EM MVEARLE M  EHA LKAQ
Sbjct: 605 HIHVSYLAQSTGGMGGGAGERPTEAVAWLEKRMHHLKEEMVMVEARLERMWHEHAALKAQ 635

[Close]

BLAST of Cp4.1LG08g00220 vs. TrEMBL
Match: A0A061E2G1_THECC (GRAM domain family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005713 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 9.3e-116
Identity = 259/544 (47.61%), Postives = 333/544 (61.21%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP  EIT+++RAKTAGIFPNAIEI  G +K+FFASFLSRDEAF LINDGW Q G G 
Sbjct: 125 KKIIPFNEITSVKRAKTAGIFPNAIEIFAGGRKYFFASFLSRDEAFKLINDGWVQHGNGA 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKE----LDPSDSSDRSMNTPILNVSMVQANVEE- 177
           + I  +Q  ++ESS QE   + IEK       ++  +S DR  + P  + S + +N E  
Sbjct: 185 KEIRDQQEPMSESSSQENGFVAIEKVNSSKNLINDMESIDRDEDVPTSSDSKLPSNSEND 244

Query: 178 -ENGPKSLPPVPTDVIQEAEPILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIK 237
            E GP+S+             I+   ++++    WK E+ +APKVP+ +TKVAE+KFPIK
Sbjct: 245 AEAGPESV-------------IITRSSASADTCSWKPENCDAPKVPEDFTKVAETKFPIK 304

Query: 238 VEDFFSFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKF 297
           VE+FF  YFSD+AV+F+ S+H +CGDK                             GAKF
Sbjct: 305 VEEFFKLYFSDNAVNFIESFHRRCGDKEFRCSSWCSHDKFGHVRDVSFQHPIKIYFGAKF 364

Query: 298 GGCQEIQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVN 357
           G CQE QKFRVYR+SHLV+E  QE++DVPY DYF VE  W+V+ D+D    GCIL VYVN
Sbjct: 365 GSCQETQKFRVYRNSHLVMETSQEINDVPYGDYFHVEGLWDVERDIDGPQEGCILRVYVN 424

Query: 358 VAFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIK 417
           VAFSKRTVWK                GKIVQSTLEECREAY  WI MA EL ++ L + +
Sbjct: 425 VAFSKRTVWK----------------GKIVQSTLEECREAYATWIDMAHELFKESLDK-Q 484

Query: 418 EGRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQG-- 477
            G     +S       +E E+   +  E+S+ ++D  R      S DV Q+   L QG  
Sbjct: 485 GGVDSSRSSAENGELQIEREVATKEPSERSHNLSDPVRTLRMSDSLDVNQRIGTLLQGSL 544

Query: 478 VDSTSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQ 537
             ++S AS  RE+V+K  S L SQ ++ L L ++       F VIFLMQ+SI+VLLSRPQ
Sbjct: 545 SSASSIASLLREFVRKSYSYLTSQGHISLVLAVA-------FAVIFLMQVSILVLLSRPQ 604

Query: 538 HIHMSYPDNASGLKFSGG--RSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQ 563
           HIH+SY   ++G    G   R  +A+AWLEKRMHHLK+EM MVEARLE M  EHA LKAQ
Sbjct: 605 HIHVSYLAQSTGGMGGGAGERPTEAVAWLEKRMHHLKEEMVMVEARLERMWHEHAALKAQ 631

[Close]

BLAST of Cp4.1LG08g00220 vs. TrEMBL
Match: D7SLY9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01530 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 8.1e-112
Identity = 250/546 (45.79%), Postives = 350/546 (64.10%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           ++IIP QE+T ++RAKTAGIFPNAIEI+ GEKK+FFASFLSRDEAF LINDGW +   G 
Sbjct: 115 KRIIPFQEVTCVKRAKTAGIFPNAIEILAGEKKYFFASFLSRDEAFKLINDGWLRHSDGV 174

Query: 118 EAILTKQISVNESSRQE--ISNLGIEKAKE-LDPSDSSDRSMNTPILNVSMVQANVEEEN 177
           +AI  +Q S+++       +++  ++ ++E ++  DS DR+ + P+   S + ++ +++ 
Sbjct: 175 KAISEQQESLSDGCLDNGIVADEEVKSSEEPVNELDSIDRNKDPPLSKDSKLPSDAKDDI 234

Query: 178 GPKSLPPVPTDVIQEAE--PILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIKV 237
            P +      +V Q  E  PI D+ +S+   + WKQE++ APKVP+ Y+ VAE+KFPIKV
Sbjct: 235 VPITPADQQDNVEQNVESVPITDS-SSSGNILTWKQENSVAPKVPEYYSNVAEAKFPIKV 294

Query: 238 EDFFSFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFG 297
           E+FF+F+FSDDAVDF+ S+H++CGDK                             GAKFG
Sbjct: 295 EEFFTFFFSDDAVDFIESFHKRCGDKEFRCTSWSPHDKFGHARDKSFQHPIKLYFGAKFG 354

Query: 298 GCQEIQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVNV 357
            C+E QKFRVY++SHL+IE  QEV+DVPY DYF VE  W V++D DES  GCIL VYVNV
Sbjct: 355 SCREAQKFRVYKNSHLIIETSQEVNDVPYGDYFTVEGLWNVESDGDESNGGCILRVYVNV 414

Query: 358 AFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKE 417
           AFSK+T+WK                GKIVQST+EECREAY +WI +A ELL+QK  E K+
Sbjct: 415 AFSKKTMWK----------------GKIVQSTVEECREAYAIWISLAHELLKQKNLE-KQ 474

Query: 418 GRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDS 477
              R + +       +E ++   ++ E+S+E  +  ++     S DV      L QG   
Sbjct: 475 EEIRSTRTAENSRAHLERQVEMEETSERSHEAANSSKIPHMCDSRDVNHGN--LLQGNTV 534

Query: 478 TSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIH 537
           TS +S   E++ K  S L++Q +L L  +I+ +      +++ LMQLSIVVLL+RPQ + 
Sbjct: 535 TSFSSLLSEWMVKF-STLKNQRHLQLLFLITFV------LILLLMQLSIVVLLARPQRVQ 594

Query: 538 M-SYPDNASGLKFSGG--RSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLR 567
           + S  D  +G+  SG   RS +A+AWLEKR+HHLKDEM MVEAR+E MRRE+ QLKAQL+
Sbjct: 595 VISQADYMNGMDISGSGERSSEAVAWLEKRIHHLKDEMFMVEARIERMRREYVQLKAQLK 633

[Close]

BLAST of Cp4.1LG08g00220 vs. TrEMBL
Match: A0A059C4D9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01549 PE=4 SV=1)

HSP 1 Score: 404.8 bits (1039), Expect = 1.7e-109
Identity = 253/548 (46.17%), Postives = 330/548 (60.22%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KII   +IT+++RAKTAGIFPNAIEI  G KK+FFASFLSRDEAF LINDGW Q G   
Sbjct: 114 KKIIHFGDITSVKRAKTAGIFPNAIEIFAGGKKYFFASFLSRDEAFKLINDGWMQHGGDF 173

Query: 118 EAILTKQISVNESSRQE--ISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENG 177
              + KQ   +E S QE    +  +  +K LD  D S+ +++ PI   +++  N E++N 
Sbjct: 174 RVAVEKQACTSELSFQENGSESDSVRSSKCLDDMDISNGNVDFPIPVDTVIAPNAEDDNA 233

Query: 178 PKSLPPVPTDVIQEAEPI----LDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPI 237
             ++         ++ PI     D ++S+S K   WK ED +APK+PD  TKVAESKFP+
Sbjct: 234 SATVSEFQDTEENDSTPIPVCSPDCNSSSSEKTWSWKVEDYDAPKIPDYQTKVAESKFPV 293

Query: 238 KVEDFFSFYFSDDAVDFVSSYHEKCGDK-----------------------------GAK 297
           KVE FF+ +FS+DAV F+ S+H KCGDK                             GA+
Sbjct: 294 KVEQFFNLFFSNDAVQFIESFHRKCGDKELKCSPWQPHDQFGHAREVSFQHPIKIYFGAR 353

Query: 298 FGGCQEIQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYV 357
           FG CQE+QKFRVYR+SHLVIE  QE++DVPY DYFRVE  W V+ D DES   C L VYV
Sbjct: 354 FGSCQEVQKFRVYRNSHLVIETSQEINDVPYGDYFRVEGLWHVRRDGDESKQCCSLCVYV 413

Query: 358 NVAFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEI 417
           NVAF K+T+++                GKIVQSTLEECREAY +W++MA ELL+++  E 
Sbjct: 414 NVAFVKKTMFR----------------GKIVQSTLEECREAYAIWVEMAHELLKERNLEK 473

Query: 418 KEGRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQG- 477
           +E R             +E + N     E S E+ +  R  +   ST+V Q     S G 
Sbjct: 474 QEDRAPQCNLIQNGGASLESKENIGNVAEVSTEITNSSRTPKMSDSTNVQQNEASFSHGN 533

Query: 478 -VDSTSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRP 537
            +DS +  S  RE + K  S +RSQ   P       L + + F VI LMQ+SIV+LLSRP
Sbjct: 534 RIDSATMLSALRETLVKFLSNMRSQTNFP-------LLVAVIFAVILLMQVSIVLLLSRP 593

Query: 538 QHIH-MSYPDNASGL-KFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKA 566
           Q++H +S  D   GL   +G RSP+A+AWLEKR++HLKDEM MVEAR+E MR EHA+LK 
Sbjct: 594 QNVHIISQADYLGGLGSGAGERSPEAVAWLEKRLYHLKDEMTMVEARIERMRWEHARLKE 638

[Close]

BLAST of Cp4.1LG08g00220 vs. TAIR10
Match: AT1G02120.1 (AT1G02120.1 GRAM domain family protein)

HSP 1 Score: 308.9 bits (790), Expect = 6.4e-84
Identity = 216/539 (40.07%), Postives = 301/539 (55.84%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP  EI+ ++RAKTAGIFPNAIEI+ G KK+FFASFLSRDEAF LI+DGW + G   
Sbjct: 121 KKIIPFAEISCVKRAKTAGIFPNAIEILAGGKKYFFASFLSRDEAFKLIHDGWLEYGSAV 180

Query: 118 EAILTKQISVNESSRQEISNLGIEKAK-ELDPSDSSDRSMNTPILNVSMVQA-NVEEENG 177
           ++    +I V E    ++S+  +++A+  +D ++  D  +    L++S   +  V  +NG
Sbjct: 181 KS--EGEILVTE---PQVSDGVVKRARSSMDLANELDIPVRDETLHLSSSSSLPVISQNG 240

Query: 178 PKSLPPVPTDVIQEAEPILDAHASTSRKMMWKQEDTEAPKVPDCYTKVAESKFPIKVEDF 237
              +P  P+ V + AEP +D  A+ +    WK EDT+APK+   +TKVAE+KF I VE+F
Sbjct: 241 ---VP--PSSVQRHAEPDVDVVAANT--FNWKPEDTDAPKLSSDFTKVAEAKFSIPVEEF 300

Query: 238 FSFYFSDDAVDFVSSYHEKCGDKGAKFGGCQEIQKFRV---------------------- 297
           F  +FSD AV FV S+H+ CGDK  +    Q  +K                         
Sbjct: 301 FRLFFSDGAVSFVESFHKNCGDKEFRCTSWQPHEKLGHTRNVSFQHPIKIYFGAKFGGCQ 360

Query: 298 -------YRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDESTNGCILNVYVNVAFS 357
                  YR+SHLVIE  QE+SDVPY+DYF VE  W++K D  +S  GCIL+VYVNVAFS
Sbjct: 361 ESQKFRMYRNSHLVIETSQEISDVPYADYFTVEGVWDLKRDCRDSVEGCILDVYVNVAFS 420

Query: 358 KRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRP 417
           KRTVWK                GKIVQSTLEECREAY  WI+MA ELL+QK  E +EG  
Sbjct: 421 KRTVWK----------------GKIVQSTLEECREAYAHWIRMAHELLKQKKLENQEG-- 480

Query: 418 RGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSH 477
                    N  +E+    +   E+ +E +++ ++             E++ +GV   S 
Sbjct: 481 ---------NKLIEDGEPLAAREERVSECDEEGKV-------------EMVGEGVVKKSL 540

Query: 478 ASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIHMSY 537
              W      L S ++ Q+        +   +V+ F VI LMQ++IVVLL +     + Y
Sbjct: 541 KEAW----VNLTSFVKRQSG-------TRQVIVLAFAVILLMQVTIVVLLKKGGGGQVEY 592

Query: 538 PDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLEEV 566
            +       +G    + + WLEKRMH L++EM MVE RL+ MR++HA LKAQ   LE +
Sbjct: 601 HERYDEYSVNG----ETLGWLEKRMHFLREEMMMVEDRLQRMRQDHAALKAQFHHLERL 592

[Close]

BLAST of Cp4.1LG08g00220 vs. NCBI nr
Match: gi|778676602|ref|XP_011650619.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 699.9 bits (1805), Expect = 3.7e-198
Identity = 390/539 (72.36%), Postives = 422/539 (78.29%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EITA+R+AKTAGIFPNAIEI VGEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 125 KKIIPFREITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EAI+ KQ S+NESSRQEI  LG+EKAKELDPSDSSDRSM+TPILNVS+VQANVEE N P 
Sbjct: 185 EAIMKKQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPT 244

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P    QEAEPILD HASTSR+ +MWK EDT+AP VPD YT+VAESKFPI VEDFF
Sbjct: 245 TLPPEPIVATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 304

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD AVDFVSSYHEKCGDK                             GAKFGGC E
Sbjct: 305 SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 364

Query: 298 IQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDV-DESTNGCILNVYVNVAFS 357
            QKFRVYRDSHLVIEV QEVS+VPYSDYFRVE HWEVK DV DES N CIL VYVNVAFS
Sbjct: 365 TQKFRVYRDSHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNVAFS 424

Query: 358 KRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRP 417
           KRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +EG  
Sbjct: 425 KRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEEG-T 484

Query: 418 RGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSH 477
           RGS S SG++  +E+E N +KSLE SNE ND+RR TESQ+STDV QQ +   QGV+STS 
Sbjct: 485 RGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDVDQQAKNSIQGVNSTSA 544

Query: 478 ASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIHMSY 537
           ASW REY KKL  +LRSQNYLP       LALVITF VIFLMQLSIV+LLSRPQHIH+S 
Sbjct: 545 ASWLREYTKKLWIVLRSQNYLP-------LALVITFAVIFLMQLSIVMLLSRPQHIHVSS 604

Query: 538 PDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLEEV 566
           PD   GLKFSGGRS DA AWLEKRMHHLKDEM MVEARLEMMRREHAQLKAQLR+LEE+
Sbjct: 605 PDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELEEL 639

[Close]

BLAST of Cp4.1LG08g00220 vs. NCBI nr
Match: gi|778676598|ref|XP_011650617.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 693.3 bits (1788), Expect = 3.4e-196
Identity = 389/542 (71.77%), Postives = 422/542 (77.86%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EITA+R+AKTAGIFPNAIEI VGEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 125 KKIIPFREITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EAI+ KQ S+NESSRQEI  LG+EKAKELDPSDSSDRSM+TPILNVS+VQANVEE N P 
Sbjct: 185 EAIMKKQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPT 244

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P    QEAEPILD HASTSR+ +MWK EDT+AP VPD YT+VAESKFPI VEDFF
Sbjct: 245 TLPPEPIVATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 304

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD AVDFVSSYHEKCGDK                             GAKFGGC E
Sbjct: 305 SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 364

Query: 298 IQKFRVYR---DSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDV-DESTNGCILNVYVNV 357
            QKFRVYR   D+HLVIEV QEVS+VPYSDYFRVE HWEVK DV DES N CIL VYVNV
Sbjct: 365 TQKFRVYRDRFDNHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNV 424

Query: 358 AFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKE 417
           AFSKRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +E
Sbjct: 425 AFSKRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEE 484

Query: 418 GRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDS 477
           G  RGS S SG++  +E+E N +KSLE SNE ND+RR TESQ+STDV QQ +   QGV+S
Sbjct: 485 G-TRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDVDQQAKNSIQGVNS 544

Query: 478 TSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIH 537
           TS ASW REY KKL  +LRSQNYLP       LALVITF VIFLMQLSIV+LLSRPQHIH
Sbjct: 545 TSAASWLREYTKKLWIVLRSQNYLP-------LALVITFAVIFLMQLSIVMLLSRPQHIH 604

Query: 538 MSYPDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLE 566
           +S PD   GLKFSGGRS DA AWLEKRMHHLKDEM MVEARLEMMRREHAQLKAQLR+LE
Sbjct: 605 VSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELE 642

[Close]

BLAST of Cp4.1LG08g00220 vs. NCBI nr
Match: gi|778676604|ref|XP_011650620.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 693.3 bits (1788), Expect = 3.4e-196
Identity = 389/542 (71.77%), Postives = 422/542 (77.86%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EITA+R+AKTAGIFPNAIEI VGEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 108 KKIIPFREITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 167

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EAI+ KQ S+NESSRQEI  LG+EKAKELDPSDSSDRSM+TPILNVS+VQANVEE N P 
Sbjct: 168 EAIMKKQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPT 227

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P    QEAEPILD HASTSR+ +MWK EDT+AP VPD YT+VAESKFPI VEDFF
Sbjct: 228 TLPPEPIVATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 287

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD AVDFVSSYHEKCGDK                             GAKFGGC E
Sbjct: 288 SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 347

Query: 298 IQKFRVYR---DSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDV-DESTNGCILNVYVNV 357
            QKFRVYR   D+HLVIEV QEVS+VPYSDYFRVE HWEVK DV DES N CIL VYVNV
Sbjct: 348 TQKFRVYRDRFDNHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNV 407

Query: 358 AFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKE 417
           AFSKRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +E
Sbjct: 408 AFSKRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEE 467

Query: 418 GRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDS 477
           G  RGS S SG++  +E+E N +KSLE SNE ND+RR TESQ+STDV QQ +   QGV+S
Sbjct: 468 G-TRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDVDQQAKNSIQGVNS 527

Query: 478 TSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIH 537
           TS ASW REY KKL  +LRSQNYLP       LALVITF VIFLMQLSIV+LLSRPQHIH
Sbjct: 528 TSAASWLREYTKKLWIVLRSQNYLP-------LALVITFAVIFLMQLSIVMLLSRPQHIH 587

Query: 538 MSYPDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLE 566
           +S PD   GLKFSGGRS DA AWLEKRMHHLKDEM MVEARLEMMRREHAQLKAQLR+LE
Sbjct: 588 VSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELE 625

[Close]

BLAST of Cp4.1LG08g00220 vs. NCBI nr
Match: gi|778676600|ref|XP_011650618.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 686.8 bits (1771), Expect = 3.2e-194
Identity = 388/542 (71.59%), Postives = 421/542 (77.68%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EITA+R+AKTAGIFPNAIEI VGEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 125 KKIIPFREITAVRKAKTAGIFPNAIEICVGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EAI+ KQ S+NESSRQEI  LG+EKAKELDPSDSSD SM+TPILNVS+VQANVEE N P 
Sbjct: 185 EAIMKKQKSINESSRQEIGILGVEKAKELDPSDSSD-SMDTPILNVSVVQANVEEVNVPT 244

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRK-MMWKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P    QEAEPILD HASTSR+ +MWK EDT+AP VPD YT+VAESKFPI VEDFF
Sbjct: 245 TLPPEPIVATQEAEPILDIHASTSRETLMWKPEDTDAPNVPDYYTQVAESKFPINVEDFF 304

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD AVDFVSSYHEKCGDK                             GAKFGGC E
Sbjct: 305 SFYFSDSAVDFVSSYHEKCGDKELKCSLWRHDDMFGHTRDVSFQHPIKIYFGAKFGGCLE 364

Query: 298 IQKFRVYR---DSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDV-DESTNGCILNVYVNV 357
            QKFRVYR   D+HLVIEV QEVS+VPYSDYFRVE HWEVK DV DES N CIL VYVNV
Sbjct: 365 TQKFRVYRDRFDNHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDESNNCCILRVYVNV 424

Query: 358 AFSKRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKE 417
           AFSKRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +E
Sbjct: 425 AFSKRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEE 484

Query: 418 GRPRGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDS 477
           G  RGS S SG++  +E+E N +KSLE SNE ND+RR TESQ+STDV QQ +   QGV+S
Sbjct: 485 G-TRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDVDQQAKNSIQGVNS 544

Query: 478 TSHASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFLMQLSIVVLLSRPQHIH 537
           TS ASW REY KKL  +LRSQNYLP       LALVITF VIFLMQLSIV+LLSRPQHIH
Sbjct: 545 TSAASWLREYTKKLWIVLRSQNYLP-------LALVITFAVIFLMQLSIVMLLSRPQHIH 604

Query: 538 MSYPDNASGLKFSGGRSPDAMAWLEKRMHHLKDEMNMVEARLEMMRREHAQLKAQLRDLE 566
           +S PD   GLKFSGGRS DA AWLEKRMHHLKDEM MVEARLEMMRREHAQLKAQLR+LE
Sbjct: 605 VSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKAQLRELE 641

[Close]

BLAST of Cp4.1LG08g00220 vs. NCBI nr
Match: gi|659074733|ref|XP_008437767.1| (PREDICTED: GRAM domain-containing protein 1A isoform X3 [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 3.0e-160
Identity = 321/461 (69.63%), Postives = 352/461 (76.36%), Query Frame = 1


Query: 58  QKIIPLQEITALRRAKTAGIFPNAIEIIVGEKKFFFASFLSRDEAFNLINDGWSQQGKGT 117
           +KIIP +EI A+R+AKTAGIFPNAIEI  GEKK+FFASFLSRDEAFNLINDGW Q  KGT
Sbjct: 125 KKIIPFREIIAVRKAKTAGIFPNAIEICDGEKKYFFASFLSRDEAFNLINDGWLQHAKGT 184

Query: 118 EAILTKQISVNESSRQEISNLGIEKAKELDPSDSSDRSMNTPILNVSMVQANVEEENGPK 177
           EA +TKQ S+NESSRQEI  LG+EKAKELDPSDSSDRSM+TPILNVS+VQANVEE N P 
Sbjct: 185 EATMTKQKSINESSRQEIGILGVEKAKELDPSDSSDRSMDTPILNVSVVQANVEEVNVPT 244

Query: 178 SLPPVPTDVIQEAEPILDAHASTSRKMM-WKQEDTEAPKVPDCYTKVAESKFPIKVEDFF 237
           +LPP P   IQE EPILD HASTSR+ + W+ ED +APKVPD YT+VAESKFPI VEDFF
Sbjct: 245 TLPPEPIVAIQEPEPILDTHASTSRETLTWRPEDRDAPKVPDYYTQVAESKFPINVEDFF 304

Query: 238 SFYFSDDAVDFVSSYHEKCGDK-----------------------------GAKFGGCQE 297
           SFYFSD+AVDFVSSYHEKCGDK                             GAKFGGC+E
Sbjct: 305 SFYFSDNAVDFVSSYHEKCGDKELKCSLWRHDDMFGHMRDVSFQHPIKIYFGAKFGGCRE 364

Query: 298 IQKFRVYRDSHLVIEVIQEVSDVPYSDYFRVEVHWEVKNDVDE-STNGCILNVYVNVAFS 357
            QKFRVYRDSHLVIEV QEVS+VPYSDYFRVE HWEVK DVD+ S NGCIL VYVNVAFS
Sbjct: 365 TQKFRVYRDSHLVIEVTQEVSEVPYSDYFRVEAHWEVKKDVDDKSNNGCILRVYVNVAFS 424

Query: 358 KRTVWKEYDAADLMMSFVDHHAGKIVQSTLEECREAYGLWIQMAKELLQQKLKEIKEGRP 417
           KRTVWK                GKIVQSTLEECREAYGLWIQMAKELL+QKL   +EG  
Sbjct: 425 KRTVWK----------------GKIVQSTLEECREAYGLWIQMAKELLKQKLTGSEEGTS 484

Query: 418 RGSTSGSGKNPPVEEEINRSKSLEKSNEMNDQRRLTESQFSTDVGQQPEILSQGVDSTSH 477
            GSTS SGK+  +E+E N +KSLEKSNE NDQRR T SQ+STDV QQ +   QGV+STS 
Sbjct: 485 -GSTSQSGKDHHIEKERNNNKSLEKSNEKNDQRRSTASQYSTDVDQQAKNSIQGVNSTSA 544

Query: 478 ASWWREYVKKLCSLLRSQNYLPLALVISXLALVITFVVIFL 488
           ASW REY+KKL  +LRSQNYLP       LALVITF VIFL
Sbjct: 545 ASWLREYIKKLWIVLRSQNYLP-------LALVITFAVIFL 561

The following BLAST results are available for this feature:

BLAST of Cp4.1LG08g00220 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VAD1_ARATH	1.1e-82	40.07	Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VA...	[more]
YSP2_YEAST	6.0e-07	51.92	Membrane-anchored lipid-binding protein YSP2 OS=Saccharomyces cerevisiae (strain...	[more]

BLAST of Cp4.1LG08g00220 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3J6_CUCSA	2.5e-198	72.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116750 PE=4 SV=1	[more]
A0A061DUJ5_THECC	6.4e-117	47.79	GRAM domain family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005713 ...	[more]
A0A061E2G1_THECC	9.3e-116	47.61	GRAM domain family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005713 ...	[more]
D7SLY9_VITVI	8.1e-112	45.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_15s0021g01530 PE=4 SV=...	[more]
A0A059C4D9_EUCGR	1.7e-109	46.17	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E01549 PE=4 SV=1	[more]

BLAST of Cp4.1LG08g00220 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02120.1	6.4e-84	40.07	GRAM domain family protein	[more]

BLAST of Cp4.1LG08g00220 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778676602\|ref\|XP_011650619.1\|	3.7e-198	72.36	PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Cucumi...	[more]
gi\|778676598\|ref\|XP_011650617.1\|	3.4e-196	71.77	PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Cucumi...	[more]
gi\|778676604\|ref\|XP_011650620.1\|	3.4e-196	71.77	PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X4 [Cucumi...	[more]
gi\|778676600\|ref\|XP_011650618.1\|	3.2e-194	71.59	PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Cucumi...	[more]
gi\|659074733\|ref\|XP_008437767.1\|	3.0e-160	69.63	PREDICTED: GRAM domain-containing protein 1A isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0050896	response to stimulus
biological_process	GO:0010033	response to organic substance
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009751	response to salicylic acid
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG08g00220.1	Cp4.1LG08g00220.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 524..565 scor
None	No IPR available	PANTHER	PTHR23319	UNCHARACTERIZED	coord: 53..332 score: 7.5E-65coord: 432..563 score: 7.5E-65coord: 349..407 score: 7.5
None	No IPR available	PANTHER	PTHR23319:SF4	AT22714P	coord: 53..332 score: 7.5E-65coord: 349..407 score: 7.5E-65coord: 432..563 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG08g00220	Cucsa.260010	Cucumber (Gy14) v1	cgycpeB0687
Cp4.1LG08g00220	CmaCh06G009390	Cucurbita maxima (Rimu)	cmacpeB855
Cp4.1LG08g00220	CmoCh06G009670	Cucurbita moschata (Rifu)	cmocpeB796
Cp4.1LG08g00220	Cla021075	Watermelon (97103) v1	cpewmB845
Cp4.1LG08g00220	Csa3G116750	Cucumber (Chinese Long) v2	cpecuB862
Cp4.1LG08g00220	MELO3C005943	Melon (DHL92) v3.5.1	cpemeB815
Cp4.1LG08g00220	ClCG05G000120	Watermelon (Charleston Gray)	cpewcgB787
Cp4.1LG08g00220	CSPI03G07090	Wild cucumber (PI 183967)	cpecpiB864
Cp4.1LG08g00220	Lsi05G022260	Bottle gourd (USVL1VR-Ls)	cpelsiB714
Cp4.1LG08g00220	MELO3C005943.2	Melon (DHL92) v3.6.1	cpemedB951
Cp4.1LG08g00220	CsaV3_3G007220	Cucumber (Chinese Long) v3	cpecucB1058
Cp4.1LG08g00220	Bhi01G000452	Wax gourd	cpewgoB1105
Cp4.1LG08g00220	CsGy3G007240	Cucumber (Gy14) v2	cgybcpeB454
Cp4.1LG08g00220	Carg25062	Silver-seed gourd	carcpeB1410

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG08g00220	Cucurbita pepo (Zucchini)	cpecpeB482
Cp4.1LG08g00220	Cucurbita maxima (Rimu)	cmacpeB013
Cp4.1LG08g00220	Cucurbita maxima (Rimu)	cmacpeB023
Cp4.1LG08g00220	Cucurbita maxima (Rimu)	cmacpeB292
Cp4.1LG08g00220	Cucurbita moschata (Rifu)	cmocpeB254
Cp4.1LG08g00220	Silver-seed gourd	carcpeB0194