Cla021075 (gene) Watermelon (97103) v1

Overview
NameCla021075
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionVascular associated death 1 (AHRD V1 ***- D3G9M3_SOYBN)
LocationChr5 : 192238 .. 194834 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTTTTTCAGGCAAAGGAATTGTTGAAGGAGAAACTTAAAGGTTCTGAAGGTCCGAATGTTATATAATTTTACTTTTCATCTAAACACGATGTTATATTCAAATCATGCAATTGATGACCTTTCTGGTTACTGTTTTGCTACCCAGAGGGAACAAGTGGTAGTACATCGCAGAGTGGTATAGATCATCATATTGAAGAAGAAATAAATAATAGCAAATCATTGGAGAAGTCAAATGAGAAGAATGACCAAAGAAGATTAACTGAATCACAATGTTCCACCGATGTTGATCAACAATCTGAAAACCTTACTCAAGGAGTCAATTCTACTTCGGCTGCTTCTTGGTTAAGAGAATACAGGAAGAAGCTTTGGTCTGTGTTACGAAGTCAAAACTATCTTCCTCTTGCCCTAGTCATCACTTTTGCTGTAATTTTTCTAATGCAGGTATGCTATTTCTTTTACTACTTATCTGCCATGGAGTCGAAATCAGTACACCATATGTTCATCTATCCATGAATTTTCATCAGTGTGGCTTGTTTGAATCATGTTCGGTAGGCCATGAATACAATTTCTAATATGATATCTTTCGGGCCCTTGGCTTCTATTTAATTATTTTTTATTGTCTAATTTTACAACAAATCTTTGATGGTATCTTCGGATGCATCCCAGTTTTTTTTTTTTTTTTTTTTTCGGTCTCTCTTACACACATCCTTCTTATGCTACCTCTAAATTTTAGTTCAATTAAATTACTCAATTCACTTGCTAAAAATCCTGAAAACCCGTTACTAAGCTATGATGGGAAACAAAATGCCAAACTCAATCGATTCTGGTCCCTTCTCAGTTCTCAGCATATCTCTTTTCCCTCCCAATTCCTTTCAATTCTTATTTAACATTAGTTAATCTTGCGTTCTCCAGAGACTCTTCTTTGCCCCTAAATCTATTATTTATAGTTAATATATTTATCATTCATATTTTATTTGTATTTTAGGTCTAATACTTACTGTCTAGGATAGAAGCTACGTTATCCATTTATGTTTCCTATTGGTAGTCTAAAACTTATAAATAATGTTATAAGGCGGCAGTTGTGTACGTTTGATGGAATGTCTAATCTTCATGCCAACTTGAACTTAGTCCATTTGAGCAAAATGTATATCAGATGATATGTTCGTCCAGATTGAGATAATAATCTATAATGTAAGATGATAATGAGTAATAATTATGTTGGGACGGACAGGCATTATAATATTTTTAACTGAACTAGCCTACCCCCCAAAGAAAAAAAGAAATCAAGGGAGAAATAGAGATATTTTGTTCCACCACAAAGAGCAAAATGTGAATGTTTCCAAATTTGAGGAAGCAAGGCATAACTGTTTTTCTGGCTGGTCTGAACAAATCAAGATTGCTCACCCTAGTGGGCTATGCAGGATATGTTCTTGTTAAATGATATAATAGTAAATTTGTTTTCACCTATCAGCTTAAGTTTTTTGGTCAATTGATGATTTAATAGTTCTGTTACCTCTCATTAAGACGTGTAACTTTCATCTCAAACATTTTGTTCTAGGAATAGAGGGCTCATCTCCTCGGGTGTCTACTTCCATGACTGTCCTATACGGTCTGCACACAATTTGAGTGCTGTAGAGGCTGAGTATCTGCAATGGCCAGAGGAGAGAATGTGTAAGGGAATAGGTCGTGAACGAAATTGATAGGGACAAAGTTGCATTGAGATTATTACAGGAATATTGAGCAAACGTCAATATTGACACCGGTTTAGGAAAGTTGTTGAGATCTCATTTTGAAGTCTTCAAAGATGAGGAAGATCCTATAGCATATCTTCATCCATAATAGATCAGGATATCTTCTCTGTTGTAGTTCAATTTCTGAAATTGAATACATTTTCAATAGGATTTAATATCTTACGAGTTTCTTTGACACCCAAATGTTGTAGGGTCAAGTGGGTTGTCCTTTGAGATTAGTTGAGCGTAAGCTAGCCCGGCCACTTATGAATATAAAAGAAAATTATTTGGATGTATTATGAAATATTTAATATTTTAATTATTAATTGATAAAAACACATTTCAAGTTAGGTATTGTTGTTGAAGAAATGTTGAAGGCATTGTAAATTGTTCTTGCTTGCGTGTGTATTGATTATTGAATATTATATTAGCAGTAGGTGGTAGCGATACATAATCTGTCATACTTTTGTAATGTCGAGGTAGCCGGTTGTCTATCGCTAGATTGTATCTTATGGTCCTTTGCTCAATTTGTTTGCCACTCCGTTTCAGTTCTATAGACCATTTGAATCTTTTCACAGACCTGGACATATAGTAATTGACGAATAATTATGTTATTTCTAATTGCAGTTGAGCATAGTTATGCTATTATCCAGACCGCAACACATCCATGTGAGTTCTCCCGACCATGGAAGGGGTCTAAAATTCAGTGGTGGAAGATCTTCTGATGCTACGGCGTGGTTGGAAAAGCGAATTCACCACCTTAAGGATGAGATGTACATGGTTGAGGCTCGGCTAGAGATGATGCGACGCGAGCATGCCCAATTAAAAGCACAGCTAAGAGAGCTTGAGGAATTAAATTAA

mRNA sequence

ATGAAATTTTTTCAGGCAAAGGAATTGTTGAAGGAGAAACTTAAAGGTTCTGAAGAGGGAACAAGTGGTAGTACATCGCAGAGTGGTATAGATCATCATATTGAAGAAGAAATAAATAATAGCAAATCATTGGAGAAGTCAAATGAGAAGAATGACCAAAGAAGATTAACTGAATCACAATGTTCCACCGATGTTGATCAACAATCTGAAAACCTTACTCAAGGAGTCAATTCTACTTCGGCTGCTTCTTGGTTAAGAGAATACAGGAAGAAGCTTTGGTCTGTGTTACGAAGTCAAAACTATCTTCCTCTTGCCCTAGTCATCACTTTTGCTGTAATTTTTCTAATGCAGTTGAGCATAGTTATGCTATTATCCAGACCGCAACACATCCATGTGAGTTCTCCCGACCATGGAAGGGGTCTAAAATTCAGTGGTGGAAGATCTTCTGATGCTACGGCGTGGTTGGAAAAGCGAATTCACCACCTTAAGGATGAGATGTACATGGTTGAGGCTCGGCTAGAGATGATGCGACGCGAGCATGCCCAATTAAAAGCACAGCTAAGAGAGCTTGAGGAATTAAATTAA

Coding sequence (CDS)

ATGAAATTTTTTCAGGCAAAGGAATTGTTGAAGGAGAAACTTAAAGGTTCTGAAGAGGGAACAAGTGGTAGTACATCGCAGAGTGGTATAGATCATCATATTGAAGAAGAAATAAATAATAGCAAATCATTGGAGAAGTCAAATGAGAAGAATGACCAAAGAAGATTAACTGAATCACAATGTTCCACCGATGTTGATCAACAATCTGAAAACCTTACTCAAGGAGTCAATTCTACTTCGGCTGCTTCTTGGTTAAGAGAATACAGGAAGAAGCTTTGGTCTGTGTTACGAAGTCAAAACTATCTTCCTCTTGCCCTAGTCATCACTTTTGCTGTAATTTTTCTAATGCAGTTGAGCATAGTTATGCTATTATCCAGACCGCAACACATCCATGTGAGTTCTCCCGACCATGGAAGGGGTCTAAAATTCAGTGGTGGAAGATCTTCTGATGCTACGGCGTGGTTGGAAAAGCGAATTCACCACCTTAAGGATGAGATGTACATGGTTGAGGCTCGGCTAGAGATGATGCGACGCGAGCATGCCCAATTAAAAGCACAGCTAAGAGAGCTTGAGGAATTAAATTAA

Protein sequence

MKFFQAKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDVDQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLSRPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKAQLRELEELN
Homology
[Close]
BLAST of Cla021075 vs. Swiss-Prot
Match: VAD1_ARATH (Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VAD1 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13
Identity = 64/188 (34.04%), Postives = 91/188 (48.40%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           A ELLK+K   ++EG                       L +  E    R    S+C  D 
Sbjct: 436 AHELLKQKKLENQEGNK---------------------LIEDGEPLAAREERVSEC--DE 495

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           + + E + +GV   S    L+E    L S ++ Q+     +V+ FAVI LMQ++IV+LL 
Sbjct: 496 EGKVEMVGEGVVKKS----LKEAWVNLTSFVKRQSGTRQVIVLAFAVILLMQVTIVVLLK 555

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           +     V    H R  ++S   + +   WLEKR+H L++EM MVE RL+ MR++HA LKA
Sbjct: 556 KGGGGQVEY--HERYDEYSV--NGETLGWLEKRMHFLREEMMMVEDRLQRMRQDHAALKA 592

Query: 186 QLRELEEL 194
           Q   LE L
Sbjct: 616 QFHHLERL 592

[Close]
BLAST of Cla021075 vs. TrEMBL
Match: A0A0A0L3J6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116750 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.4e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGT GS SQSG DHHIE+E NN+KSLE SNEKND+RR TESQ STDV
Sbjct: 452 AKELLKQKLTGSEEGTRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDV 511

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFLMQLSIVMLLS
Sbjct: 512 DQQAKNSIQGVNSTSAASWLREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 571

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           RPQHIHVSSPD+GRGLKFSGGRSSDATAWLEKR+HHLKDEMYMVEARLEMMRREHAQLKA
Sbjct: 572 RPQHIHVSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKA 631

Query: 186 QLRELEELN 195
           QLRELEEL+
Sbjct: 632 QLRELEELS 640

[Close]
BLAST of Cla021075 vs. TrEMBL
Match: B9RCZ4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1608150 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-33
Identity = 87/194 (44.85%), Postives = 126/194 (64.95%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           A ELLK+K   S E   G      ++ H E  + + ++ EKS++ ND+ R+ +   S DV
Sbjct: 450 AHELLKQKNLESRE--EGPNVIQNVEVHTEVALRSVETSEKSSQSNDRGRIAQMSGSLDV 509

Query: 66  DQQSENLTQG--VNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVML 125
           +++  +L Q    N+T+ AS LREY  +  + LRSQ+ + L LV+ F VIFLMQ+SI++L
Sbjct: 510 NERVGDLVQENFTNATAVASLLREYATRFSTFLRSQSQVSLILVVAFVVIFLMQVSILVL 569

Query: 126 LSRPQHIHVSSPDH----GRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRRE 185
           L+RPQ + V+SP      G G    G RS++A AWLE+RIHHLKDEM+MVE +LE +R E
Sbjct: 570 LNRPQTVQVASPGEYYMGGMGSSM-GDRSTEAVAWLERRIHHLKDEMFMVEGQLERLRHE 629

Query: 186 HAQLKAQLRELEEL 194
           H  +KAQL++L+ L
Sbjct: 630 HNWIKAQLKDLDGL 640

[Close]
BLAST of Cla021075 vs. TrEMBL
Match: A0A061DUJ5_THECC (GRAM domain family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005713 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 90/189 (47.62%), Postives = 116/189 (61.38%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           A EL KE L       S  +S    +  IE E+   +  E+S+  +D  R      S DV
Sbjct: 447 AHELFKESLDKQGGVDSSRSSAENGELQIEREVATKEPSERSHNLSDPVRTLRMSDSLDV 506

Query: 66  DQQSENLTQGV--NSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVML 125
           +Q+   L QG   +++S AS LRE+ +K +S L SQ ++ L L + FAVIFLMQ+SI++L
Sbjct: 507 NQRIGTLLQGSLSSASSIASLLREFVRKSYSYLTSQGHISLVLAVAFAVIFLMQVSILVL 566

Query: 126 LSRPQHIHVSSPDHGRGLKFSGG--RSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHA 185
           LSRPQHIHVS      G    G   R ++A AWLEKR+HHLK+EM MVEARLE M  EHA
Sbjct: 567 LSRPQHIHVSYLAQSTGGMGGGAGERPTEAVAWLEKRMHHLKEEMVMVEARLERMWHEHA 626

Query: 186 QLKAQLREL 191
            LKAQL+EL
Sbjct: 627 ALKAQLKEL 635

[Close]
BLAST of Cla021075 vs. TrEMBL
Match: A0A061E2G1_THECC (GRAM domain family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005713 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.3e-32
Identity = 90/189 (47.62%), Postives = 116/189 (61.38%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           A EL KE L       S  +S    +  IE E+   +  E+S+  +D  R      S DV
Sbjct: 443 AHELFKESLDKQGGVDSSRSSAENGELQIEREVATKEPSERSHNLSDPVRTLRMSDSLDV 502

Query: 66  DQQSENLTQGV--NSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVML 125
           +Q+   L QG   +++S AS LRE+ +K +S L SQ ++ L L + FAVIFLMQ+SI++L
Sbjct: 503 NQRIGTLLQGSLSSASSIASLLREFVRKSYSYLTSQGHISLVLAVAFAVIFLMQVSILVL 562

Query: 126 LSRPQHIHVSSPDHGRGLKFSGG--RSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHA 185
           LSRPQHIHVS      G    G   R ++A AWLEKR+HHLK+EM MVEARLE M  EHA
Sbjct: 563 LSRPQHIHVSYLAQSTGGMGGGAGERPTEAVAWLEKRMHHLKEEMVMVEARLERMWHEHA 622

Query: 186 QLKAQLREL 191
            LKAQL+EL
Sbjct: 623 ALKAQLKEL 631

[Close]
BLAST of Cla021075 vs. TrEMBL
Match: W9RYV5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005381 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.8e-32
Identity = 93/192 (48.44%), Postives = 120/192 (62.50%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           A ELLK  L+  +E T  +T     + H E    + +S  + +E +D+ R      + + 
Sbjct: 492 AHELLKN-LEKQQEKTPVATVVPNGEIHSERAAKDVESSGRLHETSDRSR------TQNA 551

Query: 66  DQQSENLTQG--VNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVML 125
           +QQ  NL QG    ++S ASWLRE   +  S L S+  L L ++I F VI LMQLSI++L
Sbjct: 552 NQQLGNLFQGRLAGASSFASWLREIFTRFCSSLESRGNLSLVVIIIFFVILLMQLSILVL 611

Query: 126 LSRPQHIHVSSP-----DHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRR 185
           L+RPQHIHV SP       G G+   GGRSS+A  WLEKR+HHLKDEMYMVEARLE MR 
Sbjct: 612 LARPQHIHVHSPADYMMSTGSGV---GGRSSEAMVWLEKRVHHLKDEMYMVEARLERMRH 671

Query: 186 EHAQLKAQLREL 191
           EHA LKAQL++L
Sbjct: 672 EHALLKAQLKDL 673

[Close]
BLAST of Cla021075 vs. NCBI nr
Match: gi|778676598|ref|XP_011650617.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGT GS SQSG DHHIE+E NN+KSLE SNEKND+RR TESQ STDV
Sbjct: 455 AKELLKQKLTGSEEGTRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDV 514

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFLMQLSIVMLLS
Sbjct: 515 DQQAKNSIQGVNSTSAASWLREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 574

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           RPQHIHVSSPD+GRGLKFSGGRSSDATAWLEKR+HHLKDEMYMVEARLEMMRREHAQLKA
Sbjct: 575 RPQHIHVSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKA 634

Query: 186 QLRELEELN 195
           QLRELEEL+
Sbjct: 635 QLRELEELS 643

[Close]
BLAST of Cla021075 vs. NCBI nr
Match: gi|778676602|ref|XP_011650619.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGT GS SQSG DHHIE+E NN+KSLE SNEKND+RR TESQ STDV
Sbjct: 452 AKELLKQKLTGSEEGTRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDV 511

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFLMQLSIVMLLS
Sbjct: 512 DQQAKNSIQGVNSTSAASWLREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 571

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           RPQHIHVSSPD+GRGLKFSGGRSSDATAWLEKR+HHLKDEMYMVEARLEMMRREHAQLKA
Sbjct: 572 RPQHIHVSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKA 631

Query: 186 QLRELEELN 195
           QLRELEEL+
Sbjct: 632 QLRELEELS 640

[Close]
BLAST of Cla021075 vs. NCBI nr
Match: gi|778676600|ref|XP_011650618.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGT GS SQSG DHHIE+E NN+KSLE SNEKND+RR TESQ STDV
Sbjct: 454 AKELLKQKLTGSEEGTRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDV 513

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFLMQLSIVMLLS
Sbjct: 514 DQQAKNSIQGVNSTSAASWLREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 573

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           RPQHIHVSSPD+GRGLKFSGGRSSDATAWLEKR+HHLKDEMYMVEARLEMMRREHAQLKA
Sbjct: 574 RPQHIHVSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKA 633

Query: 186 QLRELEELN 195
           QLRELEEL+
Sbjct: 634 QLRELEELS 642

[Close]
BLAST of Cla021075 vs. NCBI nr
Match: gi|778676604|ref|XP_011650620.1| (PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X4 [Cucumis sativus])

HSP 1 Score: 330.5 bits (846), Expect = 2.0e-87
Identity = 168/189 (88.89%), Postives = 177/189 (93.65%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGT GS SQSG DHHIE+E NN+KSLE SNEKND+RR TESQ STDV
Sbjct: 438 AKELLKQKLTGSEEGTRGSASQSGEDHHIEKERNNNKSLEMSNEKNDERRSTESQYSTDV 497

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 125
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFLMQLSIVMLLS
Sbjct: 498 DQQAKNSIQGVNSTSAASWLREYTKKLWIVLRSQNYLPLALVITFAVIFLMQLSIVMLLS 557

Query: 126 RPQHIHVSSPDHGRGLKFSGGRSSDATAWLEKRIHHLKDEMYMVEARLEMMRREHAQLKA 185
           RPQHIHVSSPD+GRGLKFSGGRSSDATAWLEKR+HHLKDEMYMVEARLEMMRREHAQLKA
Sbjct: 558 RPQHIHVSSPDYGRGLKFSGGRSSDATAWLEKRMHHLKDEMYMVEARLEMMRREHAQLKA 617

Query: 186 QLRELEELN 195
           QLRELEEL+
Sbjct: 618 QLRELEELS 626

[Close]
BLAST of Cla021075 vs. NCBI nr
Match: gi|659074735|ref|XP_008437768.1| (PREDICTED: GRAM domain-containing protein 1A isoform X4 [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-43
Identity = 95/110 (86.36%), Postives = 100/110 (90.91%), Query Frame = 1 

Query: 6   AKELLKEKLKGSEEGTSGSTSQSGIDHHIEEEINNSKSLEKSNEKNDQRRLTESQCSTDV 65
           AKELLK+KL GSEEGTSGSTSQSG DHHIE+E NN+KSLEKSNEKNDQRR T SQ STDV
Sbjct: 435 AKELLKQKLTGSEEGTSGSTSQSGKDHHIEKERNNNKSLEKSNEKNDQRRSTASQYSTDV 494

Query: 66  DQQSENLTQGVNSTSAASWLREYRKKLWSVLRSQNYLPLALVITFAVIFL 116
           DQQ++N  QGVNSTSAASWLREY KKLW VLRSQNYLPLALVITFAVIFL
Sbjct: 495 DQQAKNSIQGVNSTSAASWLREYIKKLWIVLRSQNYLPLALVITFAVIFL 544

The following BLAST results are available for this feature:
BLAST of Cla021075 vs. Swiss-Prot
Match NameE-valueIdentityDescription
VAD1_ARATH4.2e-1334.04Protein VASCULAR ASSOCIATED DEATH 1, chloroplastic OS=Arabidopsis thaliana GN=VA... [more]
BLAST of Cla021075 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L3J6_CUCSA1.4e-8788.89Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116750 PE=4 SV=1[more]
B9RCZ4_RICCO2.0e-3344.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1608150 PE=4 SV=1[more]
A0A061DUJ5_THECC1.3e-3247.62GRAM domain family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_005713 ... [more]
A0A061E2G1_THECC1.3e-3247.62GRAM domain family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_005713 ... [more]
W9RYV5_9ROSA2.8e-3248.44Uncharacterized protein OS=Morus notabilis GN=L484_005381 PE=4 SV=1[more]
BLAST of Cla021075 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778676598|ref|XP_011650617.1|2.0e-8788.89PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X1 [Cucumi... [more]
gi|778676602|ref|XP_011650619.1|2.0e-8788.89PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X3 [Cucumi... [more]
gi|778676600|ref|XP_011650618.1|2.0e-8788.89PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X2 [Cucumi... [more]
gi|778676604|ref|XP_011650620.1|2.0e-8788.89PREDICTED: protein VASCULAR ASSOCIATED DEATH 1, chloroplastic isoform X4 [Cucumi... [more]
gi|659074735|ref|XP_008437768.1|2.3e-4386.36PREDICTED: GRAM domain-containing protein 1A isoform X4 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0050896 response to stimulus
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU08547watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU61476watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021075Cla021075.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU08547WMU08547transcribed_cluster
WMU61476WMU61476transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 173..193
scor