Cp4.1LG07g09280 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g09280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ATP-dependent RNA helicase, putative
Location	Cp4.1LG07 : 8326011 .. 8331292 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACCGTATAAAAAGAAAAGGCGTGTAAATATATTGAGCAATGACGGGAGAGGGAATATCAGGGAAGCCTACATGTGCACATTGGGCTTAGTCGATTTCATCCTATGATCAGTTTTATCTACGATAAACCCTAAAAATCTCTCGATCTCTTCATCTTCAGATTGTTTTCATTCGTTTGATTTTGCTGTTTCTCTCCAATTCCACGATGGTTGTTTCCACGGCTAATGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCCAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGGCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCATTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTCGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGACAGAGGTAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATAGTTACCGGGATCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGTGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCCAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCAACACCACCCTGTCGACCAAGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGCGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGCTAAAGAAAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCGAAGGATGAAGGGCCGGTGGTTAGGACTGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGGTTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTGTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTGTTCAGGCTGTTCATGATAATCAGGTACTTGTTGTCATTGGCGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCCGTCGCAAAGAGGGTTGCTGAAGAGTTCGGATGTCGCTTGGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCTGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCAGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCCGAGGCCTCGTTAACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGGCGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATGATCTTCTGTCTCCTCATGATATCATCTTTGTTGAACTGTTGTCTTCAGTTACGATTGTCTATTGTTGTCTTGTCTTGCATGCATGCATTTGCCTTTTAACTATTTTGTTTGAACATAAAGTTTACATGTGCGGAGTAGAGATGGCTGCTCTGTGGGGGGGGGGGGGGGNTGAGCTTTAAAGAGGTGGAGATCGTGTGAAGAGGTTTGAGAGGTTGTTAGGCTTAACATCTCTTTGTGGGCATTGGTTATATGATCTTTTTGTAATTATGAGACAGGTCATATAAATTGGAGTGGAGTCCTTTCCTTTCAGGAGTTTAGGTTGGGATCTCTTTTTGTTGGGCTTATAGTGTATATTCCTTCATTTTTCTCTAGCTTCTTTCACAAAAGGAACCATGTAGTTTACACGCTGGTATGTTATCTAGTATAAATATATTTGGTCTGAATAGATTCAGGCTGAACCAGCAAACTATGTATTCTGTTAAGAATTGTGAGATCTCACATTGATTGGAGAGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAACCGTGAGGCTGACGGCAACATGTAACGAGCCAAAGCGGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACAAATGGTATCAGAGCCAGTCACCGGACGATGTGCTGTTACAAATGGTATCAGAGCCAGTCACCAGACGATGTGCTAGCTAGCGAGGATGCTGGCACCTAAGGGGGGTGGATTGTGAGATCCCACATTGATAGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTAGACGCGTTTTAAAACCTTGAGGAGAAACCCGAAAGGGAAAGCCCATAAAGGACAATATTTGCTAGCGGTAGGCTTGGGTTGTTACAAGAATACTAGCAAAACGTTGAAGAATTTGGAAAAGGCATCTGAATGAAGTTTCGGCGAGATGCATAATAATGTTTGTATGAAAGTTCGAGTTAAAATGGTTTTGAGGCATAGGTGGTTTACTGTCTTGTATTCTCCAGATACTAACATCTTACTGTTCCTATGAGTCTCTTCCTTCCCTTTCTAACTCCAACACGTTGTTCCTAATTTCAGGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAGAACCAACCAGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATTAACATGGTTCGTTCTATGCCGAATTTGACTGACTGTATATAGAAATCCTGTTGTATAAGCTGTTGAGGGTAAAAAGGCATTAGAAGAGGTCTTCCCATTAGTGGGAGAGGTCTTTTAGCTGTAGTTAGAGGTAATTGAAGAGAGAGTGTGGGAGAGGGAACTTGGGTGTCAAATCTTCCGCTATCACTGAAGCGTTGAGTTTTATTAATTTCATCATTCTTTTGCCCCTATGCAAGAAATCTTTGAT

mRNA sequence

GACCGTATAAAAAGAAAAGGCGTGTAAATATATTGAGCAATGACGGGAGAGGGAATATCAGGGAAGCCTACATGTGCACATTGGGCTTAGTCGATTTCATCCTATGATCAGTTTTATCTACGATAAACCCTAAAAATCTCTCGATCTCTTCATCTTCAGATTGTTTTCATTCGTTTGATTTTGCTGTTTCTCTCCAATTCCACGATGGTTGTTTCCACGGCTAATGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCCAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGGCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCATTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTCGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGACAGAGGTAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATAGTTACCGGGATCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGTGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCCAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCAACACCACCCTGTCGACCAAGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGCGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGCTAAAGAAAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCGAAGGATGAAGGGCCGGTGGTTAGGACTGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGGTTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTGTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTGTTCAGGCTGTTCATGATAATCAGGTACTTGTTGTCATTGGCGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCCGTCGCAAAGAGGGTTGCTGAAGAGTTCGGATGTCGCTTGGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCTGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCAGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCCGAGGCCTCGTTAACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGGCGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAGAACCAACCAGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATTAACATGGTTCGTTCTATGCCGAATTTGACTGACTGTATATAGAAATCCTGTTGTATAAGCTGTTGAGGGTAAAAAGGCATTAGAAGAGGTCTTCCCATTAGTGGGAGAGGTCTTTTAGCTGTAGTTAGAGGTAATTGAAGAGAGAGTGTGGGAGAGGGAACTTGGGTGTCAAATCTTCCGCTATCACTGAAGCGTTGAGTTTTATTAATTTCATCATTCTTTTGCCCCTATGCAAGAAATCTTTGAT

Coding sequence (CDS)

ATGGTTGTTTCCACGGCTAATGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCCAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGGCGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCATTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTCGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGACAGAGGTAGGGATAGGGATAGGGATAGGGATAGGGATAGGGATAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGGGATAGTTACCGGGATCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGTGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCCAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCAACACCACCCTGTCGACCAAGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGATTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGCGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGCTAAAGAAAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCGAAGGATGAAGGGCCGGTGGTTAGGACTGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGGTTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTGTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTGTTCAGGCTGTTCATGATAATCAGGTACTTGTTGTCATTGGCGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCCGTCGCAAAGAGGGTTGCTGAAGAGTTCGGATGTCGCTTGGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCTGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCAGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCCGAGGCCTCGTTAACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGGCGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAGAACCAACCAGTTTATATCCATCCGAGCAGTGCGTTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAA

Protein sequence

MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA

Homology

[Close]

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot
Match: DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 1865.1 bits (4830), Expect = 0.0e+00
Identity = 989/1224 (80.80%), Postives = 1063/1224 (86.85%), Query Frame = 1


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELELRQ 131
            VRSLL  IH I PP+  +EK     K+ +G   KF+ L I D +++ KELEKEIE E  +
Sbjct: 66   VRSLLTTIHGIYPPKPKSEK-----KKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEE 125

Query: 132  KRGDRDEEDDRYKGRAGDRGKDRERDRDR-DRGRDRDRDRDRDRDRDRDRDRDRDRDRDS 191
            +R                R +DR RDRDR + GRDRDRDR+RDRD  RDR RDR+R+R  
Sbjct: 126  RR----------------REEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGD 185

Query: 192  YRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDERYGGDAE 251
                DR  DRR         H  R R D G+ + RR    RDR  K+ Y E+++ G +  
Sbjct: 186  EEGEDRRSDRR---------HRERGRGDGGEGEDRR----RDRRAKDEYVEEDKGGAN-- 245

Query: 252  AGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHV 311
                                    EPELY+VYKGRV+RVMD GCFVQ   FRGKEGLVHV
Sbjct: 246  ------------------------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHV 305

Query: 312  SQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKK-KDADDG 371
            SQ+ATRR+  AK+ VKRD EVYVKVIS S  K SLSMRDVDQ++G+DL+PL+K  D DD 
Sbjct: 306  SQMATRRVDKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDS 365

Query: 372  PRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVS 431
             R NPS    +G V +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQL+ASGVL V 
Sbjct: 366  SRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVD 425

Query: 432  EYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 491
            E+P YD++GDG+LYQEEGA EEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLS
Sbjct: 426  EFPMYDEDGDGMLYQEEGA-EEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLS 485

Query: 492  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 551
            RAAALQSAL KERRE+REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY
Sbjct: 486  RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 545

Query: 552  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 611
            DMPEWKKDA+GK  +FGQ+SKLSIQEQR+SLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 546  DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 605

Query: 612  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 671
            TTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 606  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 665

Query: 672  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLI 731
            DTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLKKL+KRR DLRLI
Sbjct: 666  DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLI 725

Query: 732  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 791
            VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 726  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 785

Query: 792  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 851
            D+L+FLTGQEEID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRK
Sbjct: 786  DILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 845

Query: 852  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 911
            VVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRT
Sbjct: 846  VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 905

Query: 912  GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 971
            GPGKCYRLYTESAYRNEM PTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQAL
Sbjct: 906  GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 965

Query: 972  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1031
            ISAMEQLYSLGALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQT
Sbjct: 966  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT 1025

Query: 1032 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1091
            GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRR
Sbjct: 1026 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRR 1085

Query: 1092 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1151
            AQDVRKQLLSIMDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVY
Sbjct: 1086 AQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVY 1145

Query: 1152 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1211
            IHPSSALFQRQPDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKR
Sbjct: 1146 IHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKR 1168

Query: 1212 QERIEPLYDRYHEPNSWRLSKRRA 1234
            QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1206 QERIEPLYDRYHEPNSWRLSKRRA 1168

[Close]

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 1399.0 bits (3620), Expect = 0.0e+00
Identity = 744/1236 (60.19%), Postives = 944/1236 (76.38%), Query Frame = 1


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L +NGAE  D  
Sbjct: 22   LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81

Query: 72   VRSLLRIIHLILPPQK---NNEKELKKDKESDGKKSKF-----------RALVIDDDRER 131
            + +LLR+I  + PP K   + +  +K   E +  +  F           R ++ ++D + 
Sbjct: 82   ISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTMLDEEDVKV 141

Query: 132  AKELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRD 191
            A ++ KE+E  +    G   + D  ++ R   + + R RDRDRDR RDRDRDRDRDRDRD
Sbjct: 142  AVDVLKELEALMPSAAGQEKQRDPEHRDRTKKKKRSRSRDRDRDRDRDRDRDRDRDRDRD 201

Query: 192  RDRDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKN 251
            +DR+RDRDR+RD  R+RDR+RD +R    R   H        G   +R   R R ++   
Sbjct: 202  KDRERDRDRERD--RERDRERDHKRRHRSRSRSHSRTRERTKGKSRYR--SRSRSQSPFK 261

Query: 252  GYEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQ 311
              ++ E+YG   E     WR   DKH       P  +EP +  +Y G+V+ +M  GCFVQ
Sbjct: 262  DRKDREKYG---ERNLDRWR---DKHVDR----PPPEEPAIGDIYNGKVTSIMQFGCFVQ 321

Query: 312  LSDFRGK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSG 371
            L   R + EGLVH+S++    R++N  DVV + Q V VKV+SF+G K SLSM+DVDQ +G
Sbjct: 322  LEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETG 381

Query: 372  KDLLPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERW 431
            +DL P ++++         S    + P   + +S  ++ +D +    R+ L R+S PE+W
Sbjct: 382  EDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKW 441

Query: 432  EAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDM 491
            E KQ++A+ VLS  E+P +D+E  G+L + +   +E+LEIEL E+EP FL+G ++ S+DM
Sbjct: 442  EIKQMIAANVLSKEEFPDFDEE-TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDM 501

Query: 492  SPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGER 551
            SP+KI KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DP+P+   R
Sbjct: 502  SPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGR 561

Query: 552  HLAQELRGVGLSAYDMPEWKKDAYGKD-ISFGQKSKLSIQEQRQSLPIYKLKKELVQAVH 611
             +A  +RG+G+   D+PEWKK A+G +  S+G+K+++SI EQR+SLPIYKLK++LVQAVH
Sbjct: 562  QIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVH 621

Query: 612  DNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 671
            DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG
Sbjct: 622  DNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLG 681

Query: 672  EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFG 731
            +EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFG
Sbjct: 682  QEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFG 741

Query: 732  LLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 791
            LLKK V++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA
Sbjct: 742  LLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDA 801

Query: 792  ALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSE 851
            +LITV+QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSE
Sbjct: 802  SLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 861

Query: 852  MQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPI 911
            MQ+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPI
Sbjct: 862  MQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPI 921

Query: 912  SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGIND 971
            SQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM  T++PEIQR NL  T L++KAMGIND
Sbjct: 922  SQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND 981

Query: 972  LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 1031
            LLSFDFMD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV L
Sbjct: 982  LLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHL 1041

Query: 1032 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1091
            GCS+E+LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS 
Sbjct: 1042 GCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSN 1101

Query: 1092 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKD 1151
            PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KD
Sbjct: 1102 PWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1161

Query: 1152 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR 1211
            PQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP 
Sbjct: 1162 PQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA 1221

Query: 1212 YFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1231
            +FKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1222 FFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239

[Close]

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1)

HSP 1 Score: 1376.3 bits (3561), Expect = 0.0e+00
Identity = 736/1236 (59.55%), Postives = 933/1236 (75.49%), Query Frame = 1


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L +NGAE  D  
Sbjct: 22   LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81

Query: 72   VRSLLRIIHLILPPQK---NNEKELKKDKESDGKKSKF-----------RALVIDDDRER 131
            + +LLR+I  + PP K   + +  +K   E +  K  F           R ++ +DD + 
Sbjct: 82   ISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSVRTMLDEDDVKV 141

Query: 132  AKELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRD 191
            A ++ KE+E  +    G   + D  ++    DR K ++R R RDR RDRDRDR+R+RDRD
Sbjct: 142  AVDVLKELEALMPSAAGQEKQRDAEHR----DRTKKKKRSRSRDRNRDRDRDRERNRDRD 201

Query: 192  RDRDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKN 251
              R   R R R   R R R+R++ + RY        R R        R    P+DR    
Sbjct: 202  HKR---RHRSRSRSRSRTRERNKVKSRY--------RSRS-------RSQSPPKDR---- 261

Query: 252  GYEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQ 311
              ++ ++YG   E     WR   DKH       P  +EP +  +Y G+V+ +M  GCFVQ
Sbjct: 262  --KDRDKYG---ERNLDRWR---DKHVDR----PPPEEPTIGDIYNGKVTSIMQFGCFVQ 321

Query: 312  LSDFRGK-EGLVHVSQIATR-RISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSG 371
            L   R + EGLVH+S++    R++N  DVV + Q V VKV+SF+G K SLSM+DVDQ +G
Sbjct: 322  LEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETG 381

Query: 372  KDLLPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERW 431
            +DL P ++++         S    + P   + +S  ++ +D +    R+ L R+S PE+W
Sbjct: 382  EDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKW 441

Query: 432  EAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDM 491
            E KQ++A+ VLS  E+P +D+E  G+L + +   +E+LEIEL E+EP FL+G ++ S+DM
Sbjct: 442  EIKQMIAANVLSKEEFPDFDEE-TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDM 501

Query: 492  SPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGER 551
            SP+KI KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DP+P+   R
Sbjct: 502  SPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGR 561

Query: 552  HLAQELRGVGLSAYDMPEWKKDAYGKD-ISFGQKSKLSIQEQRQSLPIYKLKKELVQAVH 611
             +A  +RG+G+   D+PEWKK A+G +  S+G+K+++SI EQR+SLPIYKLK++LVQAVH
Sbjct: 562  QIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVH 621

Query: 612  DNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 671
            DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG
Sbjct: 622  DNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLG 681

Query: 672  EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFG 731
            +EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFG
Sbjct: 682  QEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFG 741

Query: 732  LLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 791
            LLKK V++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA
Sbjct: 742  LLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDA 801

Query: 792  ALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSE 851
            +LITV+QIHLTEP GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSE
Sbjct: 802  SLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 861

Query: 852  MQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPI 911
            MQ+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPI
Sbjct: 862  MQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPI 921

Query: 912  SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGIND 971
            SQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM  T++PEIQR NL  T L++KAMGIND
Sbjct: 922  SQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND 981

Query: 972  LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 1031
            LLSFDFMD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV L
Sbjct: 982  LLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHL 1041

Query: 1032 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1091
            GCS+E+LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS 
Sbjct: 1042 GCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSN 1101

Query: 1092 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKD 1151
            PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KD
Sbjct: 1102 PWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1161

Query: 1152 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR 1211
            PQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP 
Sbjct: 1162 PQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA 1215

Query: 1212 YFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1231
            +FKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1222 FFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215

[Close]

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot
Match: DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1)

HSP 1 Score: 1329.7 bits (3440), Expect = 0.0e+00
Identity = 661/984 (67.17%), Postives = 804/984 (81.71%), Query Frame = 1


Query: 259  DRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK-EGLVHVSQIATRR 318
            DRD+  QN +   +D+EP LYK+Y G+VS + D GCFV L    G+ +GLVH+SQI + R
Sbjct: 183  DRDREQQN-KRREIDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGR 242

Query: 319  --ISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKKKDA-----DDGP 378
              +++  DVVKR+Q+V VK++S +  K+SLSM+DVDQ +G+DL P +   +         
Sbjct: 243  TKLNHPSDVVKRNQQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSTNN 302

Query: 379  RMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSE 438
            R NP    +         S     +DD    + +  KR++SP+RW  KQL+ASG+LSV E
Sbjct: 303  RSNPFKPNNNN----NNSSNNNNNDDDDKYTTSKNRKRIASPDRWGYKQLIASGILSVPE 362

Query: 439  YPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR 498
             P+YD E  GL+  +E   EE+ +IE NEDEP+FL+G       +SP+KI K P GSL R
Sbjct: 363  MPNYDKEV-GLVNHDEEQPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQR 422

Query: 499  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 558
            AA+ Q+AL KER+E + QQ+  M+DSIPKDL+ PW DPMPE GERHLAQE+R +     D
Sbjct: 423  AASTQTALSKERKEEKNQQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGID 482

Query: 559  --MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 618
              +PEWKK   G  I +G+ +  SI+EQR+SLPI+ L++  +QAV ++Q+LVVIGETGSG
Sbjct: 483  TEIPEWKKVTQGSHIQYGKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSG 542

Query: 619  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 678
            KTTQ+ QYLAEAGY T GKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT 
Sbjct: 543  KTTQMAQYLAEAGYGTRGKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTS 602

Query: 679  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRL 738
            P+T+IK+MTDG+LLRE L+D NLS YSVI+LDEAHERTI TDVLFGLLK+ ++RRP+L++
Sbjct: 603  PETIIKFMTDGILLRECLLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKV 662

Query: 739  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 798
            ++TSATL+AEKFS YF N  +F IPGRTFPV+I YTK PE DYLDA+LITV+QIHL+EP 
Sbjct: 663  LITSATLEAEKFSKYFMNAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPP 722

Query: 799  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 858
            GD+LLFLTGQEEID ACQ LYERMK LG NVP+LIILPVYSALPSEMQ++IFEPAPPG R
Sbjct: 723  GDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSR 782

Query: 859  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 918
            KVV+ATNIAE SLTIDGI+YVIDPGF+KQ  +NPK G+DSLV+ PISQA+A+QR+GRAGR
Sbjct: 783  KVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGR 842

Query: 919  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 978
            TGPGKCYRLYTESA++NEM  +SIPEIQR NLG+T LTMKAMGINDLL+FDFMDPP  Q 
Sbjct: 843  TGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQT 902

Query: 979  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1038
            L+SAMEQLYSLGALDEEGLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+ 
Sbjct: 903  LVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLS 962

Query: 1039 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1098
              N+FYRP+EKQA ADQK+AKFFQPEGDHLTLL VYE+WK   FS PWCFENFVQ+RSLR
Sbjct: 963  VQNVFYRPKEKQALADQKKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLR 1022

Query: 1099 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1158
            RAQDVRKQL++IMD+YKLD++SAG+N+T+I+KAI +GFF +A++KDP EGY+TLVE QPV
Sbjct: 1023 RAQDVRKQLITIMDRYKLDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPV 1082

Query: 1159 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1218
            YIHPSS LF R PDWVIYHELVMTTKEYMREV  IDPKWLVELAP++FK +DP K+SKRK
Sbjct: 1083 YIHPSSTLFNRNPDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRK 1142

Query: 1219 RQERIEPLYDRYHEPNSWRLSKRR 1233
            R+E+IEPLYD+Y++PN+WR SKR+
Sbjct: 1143 RKEKIEPLYDKYNDPNAWRPSKRK 1160

[Close]

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot
Match: MOG5_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1)

HSP 1 Score: 1174.8 bits (3038), Expect = 0.0e+00
Identity = 663/1237 (53.60%), Postives = 856/1237 (69.20%), Query Frame = 1


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGA--EMPD 71
            + +LE+LSLVSKV SE+E H G  +K +AEF+  + +   T D+    L   G   +  D
Sbjct: 1    MDQLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDD 60

Query: 72   YFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELEL 131
                ++LRI+  +   +K N+K    D + D K S  +  +I D +E  K     + +  
Sbjct: 61   SLTATILRIVQSMTAVKKKNKKG--GDSKEDIKDSH-KITLISDAKEEIKARLPALAMAN 120

Query: 132  RQKRGDRDEED-----DRYKGR-AGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRD 191
              K  + +E+D     ++ +GR   ++   +E D  R+R R R R RDR R R R  DRD
Sbjct: 121  TAKEKEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRSRSRSRSRDRKRRRSRSGDRD 180

Query: 192  RDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDD-GDDDHRRSGRPRDRNRKNGYEED 251
            R R   S  DR RDRDRR            RDRD D G  D R   R RDR         
Sbjct: 181  RRRRSRSREDR-RDRDRR-----------DRDRDRDRGRGDRRGDDRQRDR--------- 240

Query: 252  ERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFR 311
                             RD+    G      +  E+ K+Y GRV+ +   G F+ L  FR
Sbjct: 241  -----------------RDRRDDGGARK--SEVAEIGKIYDGRVNSIQSFGAFITLEGFR 300

Query: 312  GK-EGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPL 371
             K EGLVH+SQI   R+    DV+KR + V VKV      K+SLSM++VDQ+SG+DL P 
Sbjct: 301  QKQEGLVHISQIRNERVQTVADVLKRGENVKVKVNKIENGKISLSMKEVDQNSGEDLNPR 360

Query: 372  KKKDADDG----PRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEA 431
            +     D     PR  P+ +        +G+          ++   +   R+S+PERWE 
Sbjct: 361  ETDLNPDAIGVRPRTPPASTSSWMNPEASGVGQ----GPSTSIGGGKARVRISTPERWEL 420

Query: 432  KQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSP 491
            +Q+  +GVL+ ++ P +D+E   L   ++ +  E++EIEL EDEP+FL+G  +   ++ P
Sbjct: 421  RQMQGAGVLTATDMPDFDEEMGVLRNYDDESDGEDIEIELVEDEPDFLRGYGKGGAEIEP 480

Query: 492  VKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHL 551
            VK+ KNP+GSL++AA +Q AL KER+E + Q QR       K  +       P +G +  
Sbjct: 481  VKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSNARILDPMSGNQST 540

Query: 552  A---QELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAV 611
            A    E +       +MPEW K    G   ++G+++ LS+ EQR+SLPI+ LKK L++A+
Sbjct: 541  AWSADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESLPIFALKKNLMEAM 600

Query: 612  HDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRL 671
             DNQ+LVV+GETGSGKTTQ+TQY  EAG    GKIGCTQPRRVAAMSVAKRVAEE+GC+L
Sbjct: 601  IDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMSVAKRVAEEYGCKL 660

Query: 672  GEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLF 731
            G +VGY IRFEDCT  DT+IKYMTDGMLLRE LID +LS YS+IMLDEAHERTI TDVLF
Sbjct: 661  GTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLDEAHERTIHTDVLF 720

Query: 732  GLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLD 791
            GLLK   ++RP+L+LI+TSATLD+ KFS YF    IFTIPGRTFPVEILYT++PE+DYL+
Sbjct: 721  GLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVEILYTREPESDYLE 780

Query: 792  AALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPS 851
            AA ITV+QIHLTEP GDVL+FLTGQEEID +C+ LYERMK +G +VPELIILPVY ALPS
Sbjct: 781  AAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPS 840

Query: 852  EMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITP 911
            EMQ+RIF+PAP GKRKVV+ATNIAE SLTIDGIFYV+DPGF KQ +YNPK G+DSLV+TP
Sbjct: 841  EMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTP 900

Query: 912  ISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGIN 971
            ISQA+AKQR+GRAGRTGPGKCYRLYTE A+R+EM PT +PEIQR NL  T L +KAMGIN
Sbjct: 901  ISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGIN 960

Query: 972  DLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVD 1031
            +L+ FDFMD P   ++I+A+  L++L ALD +GLLTKLGR+MAEFPL+P LSK+L+ SVD
Sbjct: 961  NLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVD 1020

Query: 1032 LGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFS 1091
            LGCS+E+LTI+AM+   NIFYRP+EKQ  ADQK+AKF QPEGDHLTLLAVY +WK  +FS
Sbjct: 1021 LGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTLLAVYNSWKNHHFS 1080

Query: 1092 GPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARK 1151
             PWCFENF+Q RS++RAQD+RKQLL IMD++KL +VS G++ ++++KAI +GFF +AA++
Sbjct: 1081 QPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQKAICSGFFRNAAKR 1140

Query: 1152 DPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAP 1211
            DPQEGYRTL + Q VYIHPSSA FQ+QP+WV+YHELVMTTKEYMREVT IDPKWLVE AP
Sbjct: 1141 DPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAP 1190

Query: 1212 RYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1231
             +FK+ D TK+S  KR ++I+PL+D+Y + N+WR+++
Sbjct: 1201 SFFKIGDSTKLSTFKRNQKIDPLFDKYADANAWRITR 1190

[Close]

BLAST of Cp4.1LG07g09280 vs. TrEMBL
Match: A0A0A0LG89_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013240 PE=4 SV=1)

HSP 1 Score: 2224.5 bits (5763), Expect = 0.0e+00
Identity = 1167/1235 (94.49%), Postives = 1189/1235 (96.28%), Query Frame = 1


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            M  S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVIDDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKELKK+KESDG K KFRAL I DDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDG-KGKFRALAIGDDRERAK 120

Query: 121  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 180
            ELEKEIELE  QK G+RD EDDRY+ RAGDRG  R RDRDRDRGRDR RDRD DRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRAGDRG--RGRDRDRDRGRDRHRDRDVDRDRDRY 180

Query: 181  RDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDD-GDDDHRRSGRPRDRNRKNG 240
            RDRD         DRD+DRDRRRDRY+RDERHGGRDRDDD GDDDHRRSGR RDRNR+NG
Sbjct: 181  RDRD--------WDRDKDRDRRRDRYDRDERHGGRDRDDDGGDDDHRRSGRQRDRNRRNG 240

Query: 241  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 300
            YEE+E + GD E GNGNWRGDR     NG+H PV+ EPELY VYKGRVSRVMDTGCFVQL
Sbjct: 241  YEENESHRGDVEDGNGNWRGDR-----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQL 300

Query: 301  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 360
            +DFRGKEGLVHVSQIATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDL
Sbjct: 301  NDFRGKEGLVHVSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360

Query: 361  LPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420
            LPLKKKDADDGPRMNPSD+KD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK
Sbjct: 361  LPLKKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420

Query: 421  QLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPV 480
            QL+ASGVLSVSEYPSYDDEGDGLLYQEEG AEEELEIELNEDEP FLQGQSRYSIDMSPV
Sbjct: 421  QLIASGVLSVSEYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPAFLQGQSRYSIDMSPV 480

Query: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540
            KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA
Sbjct: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540

Query: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600
            QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV
Sbjct: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG
Sbjct: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKK 720
            YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+
Sbjct: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQ 720

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
            LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT
Sbjct: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780

Query: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR
Sbjct: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS
Sbjct: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSF
Sbjct: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD
Sbjct: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF
Sbjct: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG
Sbjct: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV
Sbjct: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1200

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1218

[Close]

BLAST of Cp4.1LG07g09280 vs. TrEMBL
Match: M5X766_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000417mg PE=4 SV=1)

HSP 1 Score: 1998.0 bits (5175), Expect = 0.0e+00
Identity = 1053/1225 (85.96%), Postives = 1119/1225 (91.35%), Query Frame = 1


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETH+G GDKVLAEFITE+GR CETVDEFD KLK+NGAEMP
Sbjct: 8    DDGLKKLEYLSLVSKVCSELETHIGVGDKVLAEFITELGRKCETVDEFDTKLKKNGAEMP 67

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELE 128
            DYFVR+LL IIH ILPP+   EK+ KK+  SDG+K+KF+AL + D+++R K++EKEIE+E
Sbjct: 68   DYFVRTLLTIIHAILPPKPKPEKDSKKESASDGRKTKFKALAVADNKDRVKDIEKEIEME 127

Query: 129  LRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRDRDRDR 188
             ++KR  R+E+D+             ER+ DR RG DR R+ DRDRDRDR R     RDR
Sbjct: 128  TKEKRNRREEQDE-------------EREEDRRRGSDRYREGDRDRDRDRHRG---GRDR 187

Query: 189  DSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDERYGGD 248
            D        R+RRR+RY+RDER      +DD DD  R + R  ++++++ YE+D    GD
Sbjct: 188  DG-------RERRRERYDRDERRRDTHYNDDDDDRGRHTDR-YNKHKRDRYEDD----GD 247

Query: 249  AEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLV 308
             +    + RG+RD+  QNGQ+H    EPELY+VYKGRVSRVMDTGCFVQL+D RGKEGLV
Sbjct: 248  VKEDGDDRRGNRDR--QNGQNH--SDEPELYQVYKGRVSRVMDTGCFVQLNDLRGKEGLV 307

Query: 309  HVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKKKDADD 368
            HVSQ+ATRRISNAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQH+GKDLLPLKK   DD
Sbjct: 308  HVSQMATRRISNAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQHTGKDLLPLKKSSEDD 367

Query: 369  GPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSV 428
              R NPS SKD GPV RTGLSGI+IVE+D   PSRRPLKRMSSPE+WEAKQL+ASGVL V
Sbjct: 368  ALRTNPSFSKD-GPVTRTGLSGIRIVEEDDVGPSRRPLKRMSSPEKWEAKQLIASGVLGV 427

Query: 429  SEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 488
            +EYP YD+E DG+LYQEEGA EEELEIELNEDEP FL GQSRYS+DMSPVKIFKNPEGSL
Sbjct: 428  TEYPMYDEETDGMLYQEEGA-EEELEIELNEDEPAFLNGQSRYSVDMSPVKIFKNPEGSL 487

Query: 489  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 548
             RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA
Sbjct: 488  GRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 547

Query: 549  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 608
            YDMPEWKKDA+GK ISFGQ+SKLSIQEQRQSLPIYKLKKEL+ AVH+NQVLVVIGETGSG
Sbjct: 548  YDMPEWKKDAFGKTISFGQRSKLSIQEQRQSLPIYKLKKELIAAVHENQVLVVIGETGSG 607

Query: 609  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 668
            KTTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 608  KTTQVTQYLAEAGYTTMGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 667

Query: 669  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRL 728
            PDTVIKYMTDGMLLREILID+NLSQYSV+MLDEAHERTI TDVLFGLLKKLVKRRPDLRL
Sbjct: 668  PDTVIKYMTDGMLLREILIDENLSQYSVVMLDEAHERTIHTDVLFGLLKKLVKRRPDLRL 727

Query: 729  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 788
            IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPE
Sbjct: 728  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE 787

Query: 789  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 848
            GD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKR
Sbjct: 788  GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKR 847

Query: 849  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 908
            KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 848  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 907

Query: 909  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 968
            TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 908  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGTTTLTMKAMGINDLLSFDFMDPPSPQA 967

Query: 969  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1028
            LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ
Sbjct: 968  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1027

Query: 1029 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1088
            TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1028 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1087

Query: 1089 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1148
            RAQDVRKQLLSIMDKYKLDVVSAGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPV
Sbjct: 1088 RAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPV 1147

Query: 1149 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1208
            YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1148 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRK 1198

Query: 1209 RQERIEPLYDRYHEPNSWRLSKRRA 1234
            RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1208 RQERIEPLYDRYHEPNSWRLSKRRA 1198

[Close]

BLAST of Cp4.1LG07g09280 vs. TrEMBL
Match: W9QN92_9ROSA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Morus notabilis GN=L484_012201 PE=4 SV=1)

HSP 1 Score: 1986.8 bits (5146), Expect = 0.0e+00
Identity = 1057/1228 (86.07%), Postives = 1127/1228 (91.78%), Query Frame = 1


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            D+GLKKLEYLSLVSKVC+ELE HLGFGDKVLAEFITEMG++C+TVDEFDAKLKENGAEMP
Sbjct: 5    DEGLKKLEYLSLVSKVCTELENHLGFGDKVLAEFITEMGQNCDTVDEFDAKLKENGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELE 128
            DYFVR+LL IIH ILPP+  +EK+LK D +SDG K+K+ AL I D+++RAKELEKEIE E
Sbjct: 65   DYFVRTLLTIIHAILPPKPKSEKDLKIDNDSDGNKTKYGALAIADNKDRAKELEKEIEAE 124

Query: 129  LRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRDRDRDR 188
             R++R  R+E D+           DRE +R R R RDRDR+RDRDRDRDR+ +R+RDRDR
Sbjct: 125  ARKRR--REERDE-----------DREENRYRGRDRDRDRERDRDRDRDRNGERNRDRDR 184

Query: 189  DSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDR---NRKNGYEEDERY 248
            D  RD+DRDRDRR D+Y  + +   +++DD  DD  R  GR RDR   NR+ GY E+   
Sbjct: 185  DRDRDKDRDRDRRGDKYGGEAKR--KEKDDYADDVDR--GRHRDRYEVNRRGGYGEN--- 244

Query: 249  GGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKE 308
             GD    + + RG RD  ++NG+ H    EPELY VYKGRVSRVMD+G FVQL+DFRGKE
Sbjct: 245  -GDFTGHDDDRRGSRD--SRNGRSH--SDEPELYMVYKGRVSRVMDSGFFVQLNDFRGKE 304

Query: 309  GLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKKKD 368
            GLVHVSQIATRRI+NAKDVVKRDQEVYVKVIS S QKLSLSMRDVDQ++G+DLLP+KK  
Sbjct: 305  GLVHVSQIATRRITNAKDVVKRDQEVYVKVISVSVQKLSLSMRDVDQNTGRDLLPMKKSS 364

Query: 369  ADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGV 428
             DD  R NPS SK EGPV RTG+SGI+I+E+D    SRRPLKRMSSPE+WEAKQL+ASGV
Sbjct: 365  EDDAFRTNPSGSK-EGPVTRTGISGIRILEEDDLGSSRRPLKRMSSPEKWEAKQLVASGV 424

Query: 429  LSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPE 488
             S++E+P YD+EGDGLLYQEEGA EEELEIELN+DEP FL GQSRYS+DMSPVKIFKNPE
Sbjct: 425  FSINEHPMYDEEGDGLLYQEEGA-EEELEIELNDDEPAFLNGQSRYSVDMSPVKIFKNPE 484

Query: 489  GSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVG 548
            GSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVG
Sbjct: 485  GSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVG 544

Query: 549  LSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGET 608
            LSAYDMPEWKKDA+GK ISFGQ+SKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGET
Sbjct: 545  LSAYDMPEWKKDAFGKTISFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGET 604

Query: 609  GSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED 668
            GSGKTTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED
Sbjct: 605  GSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFED 664

Query: 669  CTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPD 728
            CT PDTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLKKLV+RRPD
Sbjct: 665  CTSPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLVQRRPD 724

Query: 729  LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLT 788
            LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDAALITVLQIHLT
Sbjct: 725  LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLT 784

Query: 789  EPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPP 848
            EPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPP
Sbjct: 785  EPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPP 844

Query: 849  GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGR 908
            GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYN KQGLDSLVITPISQASAKQRAGR
Sbjct: 845  GKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNAKQGLDSLVITPISQASAKQRAGR 904

Query: 909  AGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPS 968
            AGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG  TL+MKAMGINDLLSFDFMDPP+
Sbjct: 905  AGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGSVTLSMKAMGINDLLSFDFMDPPA 964

Query: 969  PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIA 1028
            PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCS+EILTIIA
Sbjct: 965  PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSEEILTIIA 1024

Query: 1029 MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR 1088
            MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR
Sbjct: 1025 MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSR 1084

Query: 1089 SLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVEN 1148
            SLRRAQDVRKQLLSIMDKYKLDVVSAGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVEN
Sbjct: 1085 SLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVEN 1144

Query: 1149 QPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMS 1208
            QPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTKMS
Sbjct: 1145 QPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMS 1204

Query: 1209 KRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            KRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1205 KRKRQERIEPLYDRYHEPNSWRLSKRRA 1205

[Close]

BLAST of Cp4.1LG07g09280 vs. TrEMBL
Match: A0A061FE18_THECC (Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 1 OS=Theobroma cacao GN=TCM_034192 PE=4 SV=1)

HSP 1 Score: 1974.1 bits (5113), Expect = 0.0e+00
Identity = 1050/1230 (85.37%), Postives = 1103/1230 (89.67%), Query Frame = 1


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            DD L+KLEYLSLVSKV +ELE+H+GF DKVLAEFIT+MGR CETV+EFDAKLKENGAE+P
Sbjct: 8    DDALEKLEYLSLVSKVSTELESHVGFSDKVLAEFITDMGRHCETVEEFDAKLKENGAELP 67

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELE 128
            DYFVR+LL IIH ILPP+   EKE KK+   DGKK KF+AL I DD++RAKELEKEIELE
Sbjct: 68   DYFVRTLLTIIHAILPPKPKGEKESKKETAGDGKKGKFKALAIADDKDRAKELEKEIELE 127

Query: 129  LRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRDR---- 188
             R                  DR K+ +RDRDRDR RDRDRDR RDRDRDR R RDR    
Sbjct: 128  TR------------------DRRKEEDRDRDRDRDRDRDRDR-RDRDRDRSRHRDRYKEY 187

Query: 189  -DRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDE 248
             D DR  Y  R R+R+R RD          RD D+D  D   R+   RDR+   G E+ E
Sbjct: 188  GDDDRRDYGSRGRNRERNRD---------NRDGDEDNRDYRNRTSH-RDRDNGEGGEDGE 247

Query: 249  RYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRG 308
            R        NG +R               D EPELYKVYKGRVSRVMD+GCFVQL++ RG
Sbjct: 248  R------RSNGRYR---------------DDEPELYKVYKGRVSRVMDSGCFVQLNELRG 307

Query: 309  KEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKK 368
            KEGLVHVSQ+ATRRISNAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQ++GKDLLPLKK
Sbjct: 308  KEGLVHVSQMATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGKDLLPLKK 367

Query: 369  KDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMAS 428
               DD  R NPS  K EGPV+RTGLSGI+IVED+  VPSRRPLKRMSSPERWEAKQL+AS
Sbjct: 368  SSDDDAFRTNPSAGK-EGPVMRTGLSGIRIVEDENAVPSRRPLKRMSSPERWEAKQLIAS 427

Query: 429  GVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKN 488
            GVLSV EYP YD+EGDG+LYQEEG AEEELEIELNEDEP FLQGQ+RYS+D+SPVKIFKN
Sbjct: 428  GVLSVDEYPMYDEEGDGMLYQEEG-AEEELEIELNEDEPAFLQGQTRYSVDVSPVKIFKN 487

Query: 489  PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG 548
            PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG
Sbjct: 488  PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG 547

Query: 549  VGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIG 608
            VGLSAYDMPEWKKDA+GK ++FGQ+SKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIG
Sbjct: 548  VGLSAYDMPEWKKDAFGKALTFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIG 607

Query: 609  ETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF 668
            ETGSGKTTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF
Sbjct: 608  ETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF 667

Query: 669  EDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRR 728
            EDCTGPDTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK+LVKRR
Sbjct: 668  EDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRR 727

Query: 729  PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIH 788
            PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDAALITVLQIH
Sbjct: 728  PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIH 787

Query: 789  LTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPA 848
            LTEPEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 
Sbjct: 788  LTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPP 847

Query: 849  PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 908
            PPGKRKVVVATNIAEASLTIDGIFYV+DPGFAKQNVYNPKQGLDSLVITPISQASAKQRA
Sbjct: 848  PPGKRKVVVATNIAEASLTIDGIFYVVDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 907

Query: 909  GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDP 968
            GRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLG TTL MKAMGINDLLSFDFMDP
Sbjct: 908  GRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGTTTLMMKAMGINDLLSFDFMDP 967

Query: 969  PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 1028
            P+PQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI
Sbjct: 968  PAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 1027

Query: 1029 IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1088
            I+MIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ
Sbjct: 1028 ISMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1087

Query: 1089 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLV 1148
            SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFT+IRKAI AGFFFHA RKDPQEGYRTLV
Sbjct: 1088 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAIAAGFFFHAGRKDPQEGYRTLV 1147

Query: 1149 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTK 1208
            ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTK
Sbjct: 1148 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTK 1185

Query: 1209 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            MSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1208 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1185

[Close]

BLAST of Cp4.1LG07g09280 vs. TrEMBL
Match: U5FPJ0_POPTR (ATP-dependent RNA helicase family protein OS=Populus trichocarpa GN=POPTR_0015s05960g PE=4 SV=1)

HSP 1 Score: 1971.8 bits (5107), Expect = 0.0e+00
Identity = 1055/1236 (85.36%), Postives = 1113/1236 (90.05%), Query Frame = 1


Query: 2    VVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLK 61
            + + A  D GLKKLEYLSLVSKVCSELETHLGFGDK+LAEFITE+GRSCETVDEFDAKLK
Sbjct: 1    MATAAENDAGLKKLEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLK 60

Query: 62   ENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKESDG--KKSKFRALVIDDDRERAK 121
            ENGAEMPDYFVR+LL IIH ILPP+   EKE KKDKE+DG  K SKF+AL I D R+R K
Sbjct: 61   ENGAEMPDYFVRTLLTIIHAILPPKA--EKEGKKDKENDGSGKDSKFKALSIKDSRDRVK 120

Query: 122  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 181
            E+++E+E+E  +K   R E +DR++ R  D   DR  +RDR RGRDRDR+RDRDRD DR+
Sbjct: 121  EIDRELEIEAEEK--SRRENEDRHRERDND---DRHIERDR-RGRDRDRERDRDRDTDRE 180

Query: 182  RDRDR-DRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNG 241
            R+RD  DRD     DR RDR RRRD ++ ++  G R+R                RN K+G
Sbjct: 181  RERDMYDRD-----DRRRDRGRRRDGHDIEDGEGERER----------------RNGKHG 240

Query: 242  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 301
                  YGG    GN N                   EPELY VYKGRVSRVMDTGCFV+L
Sbjct: 241  ------YGG----GNSN-------------------EPELYGVYKGRVSRVMDTGCFVEL 300

Query: 302  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 361
            SDF+GKEGLVHVSQIATRR+ NAKDVVKRDQEVYVKVIS SG KLSLSMRDVDQ+SGKDL
Sbjct: 301  SDFKGKEGLVHVSQIATRRVGNAKDVVKRDQEVYVKVISVSGNKLSLSMRDVDQNSGKDL 360

Query: 362  LPLKKK-DADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEA 421
            LPLKK+ D +DG R N      EGPV RTGLSGI+IVE++ T PSRRPLKRMSSPE+WEA
Sbjct: 361  LPLKKRDDEEDGFRSNALGLSKEGPVTRTGLSGIRIVEEEDTGPSRRPLKRMSSPEKWEA 420

Query: 422  KQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSP 481
            KQL+ASGVLSV EYP YD+E DGLLYQEEG  EEELEIE+NEDEP FLQGQ+RYS+DMSP
Sbjct: 421  KQLIASGVLSVQEYPMYDEEIDGLLYQEEG-VEEELEIEMNEDEPAFLQGQTRYSVDMSP 480

Query: 482  VKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHL 541
            VKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHL
Sbjct: 481  VKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHL 540

Query: 542  AQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQ 601
            AQELRGVGLSAYDMPEWKKDA+GK +++GQ+SKLSIQEQRQSLPIYKLKKEL+QAVHDNQ
Sbjct: 541  AQELRGVGLSAYDMPEWKKDAFGKALTYGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQ 600

Query: 602  VLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEV 661
            VLVVIGETGSGKTTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEV
Sbjct: 601  VLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEV 660

Query: 662  GYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK 721
            GYAIRFEDCTGPDTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLK
Sbjct: 661  GYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLK 720

Query: 722  KLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALI 781
            KLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LI
Sbjct: 721  KLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLI 780

Query: 782  TVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQS 841
            TVLQIHLTEPEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQS
Sbjct: 781  TVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQS 840

Query: 842  RIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQA 901
            RIF+PAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQA
Sbjct: 841  RIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQA 900

Query: 902  SAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLS 961
            SAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLG TTLTMKAMGINDLLS
Sbjct: 901  SAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGFTTLTMKAMGINDLLS 960

Query: 962  FDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCS 1021
            FDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCS
Sbjct: 961  FDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCS 1020

Query: 1022 DEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWC 1081
            DEILT+IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWC
Sbjct: 1021 DEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWC 1080

Query: 1082 FENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQE 1141
            FENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFT+IRKAITAGFFFHAARKDPQE
Sbjct: 1081 FENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQE 1140

Query: 1142 GYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFK 1201
            GYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FK
Sbjct: 1141 GYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFK 1177

Query: 1202 VADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            V+DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 VSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1177

[Close]

BLAST of Cp4.1LG07g09280 vs. TAIR10
Match: AT3G26560.1 (AT3G26560.1 ATP-dependent RNA helicase, putative)

HSP 1 Score: 1865.1 bits (4830), Expect = 0.0e+00
Identity = 989/1224 (80.80%), Postives = 1063/1224 (86.85%), Query Frame = 1


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELELRQ 131
            VRSLL  IH I PP+  +EK     K+ +G   KF+ L I D +++ KELEKEIE E  +
Sbjct: 66   VRSLLTTIHGIYPPKPKSEK-----KKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEE 125

Query: 132  KRGDRDEEDDRYKGRAGDRGKDRERDRDR-DRGRDRDRDRDRDRDRDRDRDRDRDRDRDS 191
            +R                R +DR RDRDR + GRDRDRDR+RDRD  RDR RDR+R+R  
Sbjct: 126  RR----------------REEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGD 185

Query: 192  YRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDERYGGDAE 251
                DR  DRR         H  R R D G+ + RR    RDR  K+ Y E+++ G +  
Sbjct: 186  EEGEDRRSDRR---------HRERGRGDGGEGEDRR----RDRRAKDEYVEEDKGGAN-- 245

Query: 252  AGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHV 311
                                    EPELY+VYKGRV+RVMD GCFVQ   FRGKEGLVHV
Sbjct: 246  ------------------------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHV 305

Query: 312  SQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKK-KDADDG 371
            SQ+ATRR+  AK+ VKRD EVYVKVIS S  K SLSMRDVDQ++G+DL+PL+K  D DD 
Sbjct: 306  SQMATRRVDKAKEFVKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDS 365

Query: 372  PRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVS 431
             R NPS    +G V +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQL+ASGVL V 
Sbjct: 366  SRSNPSYRTKDGQVTKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVD 425

Query: 432  EYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 491
            E+P YD++GDG+LYQEEGA EEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLS
Sbjct: 426  EFPMYDEDGDGMLYQEEGA-EEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLS 485

Query: 492  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 551
            RAAALQSAL KERRE+REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY
Sbjct: 486  RAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 545

Query: 552  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 611
            DMPEWKKDA+GK  +FGQ+SKLSIQEQR+SLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 546  DMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGK 605

Query: 612  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 671
            TTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 606  TTQVTQYLAEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 665

Query: 672  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLI 731
            DTVIKYMTDGMLLREILID+NLSQYSVIMLDEAHERTI TDVLFGLLKKL+KRR DLRLI
Sbjct: 666  DTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLI 725

Query: 732  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 791
            VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 726  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 785

Query: 792  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 851
            D+L+FLTGQEEID ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRK
Sbjct: 786  DILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRK 845

Query: 852  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 911
            VVVATNIAEASLTIDGI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRT
Sbjct: 846  VVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRT 905

Query: 912  GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 971
            GPGKCYRLYTESAYRNEM PTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQAL
Sbjct: 906  GPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQAL 965

Query: 972  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1031
            ISAMEQLYSLGALDEEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQT
Sbjct: 966  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT 1025

Query: 1032 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1091
            GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRR
Sbjct: 1026 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRR 1085

Query: 1092 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1151
            AQDVRKQLLSIMDKYKLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVY
Sbjct: 1086 AQDVRKQLLSIMDKYKLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVY 1145

Query: 1152 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1211
            IHPSSALFQRQPDWVIYH+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKR
Sbjct: 1146 IHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKR 1168

Query: 1212 QERIEPLYDRYHEPNSWRLSKRRA 1234
            QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1206 QERIEPLYDRYHEPNSWRLSKRRA 1168

[Close]

BLAST of Cp4.1LG07g09280 vs. TAIR10
Match: AT1G32490.1 (AT1G32490.1 RNA helicase family protein)

HSP 1 Score: 777.3 bits (2006), Expect = 1.4e-224
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 1


Query: 557  DAYGKDISFGQKSKLS-IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQ 616
            DA  K     +K+ L  +QE R+SLPIY  + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380  DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439

Query: 617  YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 676
            YL EAGYT  GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   TV+KY
Sbjct: 440  YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499

Query: 677  MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATL 736
            MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559

Query: 737  DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 796
            DAEKFS YF    IF+ PGR +PVEI YT  PE DY+DAA++T+L IH+ EP GD+L+F 
Sbjct: 560  DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619

Query: 797  TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 856
            TGQEEI+ A + L  R++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620  TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679

Query: 857  IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 916
            IAE SLTIDGI YV+DPGF+K   YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680  IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739

Query: 917  RLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 976
            RLYT   Y N++   ++PE+QR NL    L +K++GI+DL++FDFMDPP  +AL+ ++E 
Sbjct: 740  RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799

Query: 977  LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1036
            L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+   G+IFY
Sbjct: 800  LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859

Query: 1037 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1096
            RP++KQ  AD  R  F     GDH+ LL VY +WK  NFS  WC+EN++Q RS++RA+D+
Sbjct: 860  RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919

Query: 1097 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1156
            R QL  ++++ ++D+ S       +RK+I AGFF H A+      YRT+   Q V+IHP+
Sbjct: 920  RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979

Query: 1157 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1209
            S L Q  P WV+YHELV+T+KEYMR+VT + P+WL+ELAP Y+++ D    + +K
Sbjct: 980  SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034

[Close]

BLAST of Cp4.1LG07g09280 vs. TAIR10
Match: AT2G35340.1 (AT2G35340.1 helicase domain-containing protein)

HSP 1 Score: 760.4 bits (1962), Expect = 1.7e-219
Identity = 363/647 (56.11%), Postives = 489/647 (75.58%), Query Frame = 1


Query: 564  SFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 623
            S G+ +   +QE R++LPIY  + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT
Sbjct: 388  SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447

Query: 624  TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 683
              GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   T++KYMTDGMLLR
Sbjct: 448  KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507

Query: 684  EILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGY 743
            E+L + +L  YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +
Sbjct: 508  ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567

Query: 744  FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDF 803
            F    IF  PGR +PV+I +T  PE DY+DAA+ TVL IH+ EP GDVL+FL GQEEI+ 
Sbjct: 568  FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627

Query: 804  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 863
              ++L  +++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTI
Sbjct: 628  VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687

Query: 864  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 923
            DGI YV+DPGF+K   YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT   Y
Sbjct: 688  DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747

Query: 924  RNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 983
             N++   ++PEIQR NL    L++K++GI++LL+FDFMDPP  +ALI ++E L++LGAL+
Sbjct: 748  YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807

Query: 984  EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQ 1043
            + G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+  G +IFYRP++KQ  
Sbjct: 808  QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 867

Query: 1044 ADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1103
            AD     F     GDH+  L +Y +WK  N+S  WC+EN++Q RS++RA+D+R QL  ++
Sbjct: 868  ADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 927

Query: 1104 DKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1163
            ++ ++DV S       IRK+I AGFF H A+      YRT+   Q V+IHP+S L Q  P
Sbjct: 928  ERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP 987

Query: 1164 DWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1209
             WV+YH+LV+T+KEYMR+VT + P+WL+E+AP Y+++ D    + +K
Sbjct: 988  RWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034

[Close]

BLAST of Cp4.1LG07g09280 vs. TAIR10
Match: AT5G13010.1 (AT5G13010.1 RNA helicase family protein)

HSP 1 Score: 748.8 bits (1932), Expect = 5.3e-216
Identity = 400/824 (48.54%), Postives = 561/824 (68.08%), Query Frame = 1


Query: 414  RWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIEL--NEDEPEFLQGQSRY 473
            +WE +QL+ SG +  +E             Q E  +EEE +  L  ++ +P FL G+  Y
Sbjct: 399  QWEDRQLLRSGAVRGTEV------------QTEFDSEEERKAILLVHDTKPPFLDGRVVY 458

Query: 474  SIDMSPVKIFKNPEGSLSRAAALQSALIKERRE---VREQQQRTM---------LDSIPK 533
            +    PV   K+P   ++  +   S L+KE RE     + +QR           +  I K
Sbjct: 459  TKQAEPVMPVKDPTSDMAIISRKGSGLVKEIREKQSANKSRQRFWELAGSNLGNILGIEK 518

Query: 534  DLNRPWEDP--MPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQR 593
               +   D   + + GE     + +G    A  M +      G+ +S    SK ++ EQR
Sbjct: 519  SAEQIDADTAVVGDDGE----VDFKGEAKFAQHMKK------GEAVSEFAMSK-TMAEQR 578

Query: 594  QSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVA 653
            Q LPI+ ++ EL+Q + +NQV+VV+GETGSGKTTQ+TQYL E GYT +G +GCTQPRRVA
Sbjct: 579  QYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRRVA 638

Query: 654  AMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVI 713
            AMSVAKRV+EE    LG+++GYAIRFED TGP+TVIKYMTDG+LLRE L D +L +Y V+
Sbjct: 639  AMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYRVV 698

Query: 714  MLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 773
            ++DEAHER++ TDVLFG+LKK+V RR D +LIVTSATL+A+KFS +F +  IF IPGRTF
Sbjct: 699  VMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGRTF 758

Query: 774  PVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGL-- 833
            PV ILY+K P  DY++AA+   + IH+T P GD+L+F+TGQ+EI+ AC SL ERM+ L  
Sbjct: 759  PVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQLVS 818

Query: 834  --GKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 893
               + +  L+ILP+YS LP+++Q++IF+    G RK +VATNIAE SLT+DGI+YVID G
Sbjct: 819  SSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVIDTG 878

Query: 894  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIP 953
            + K  V+NP+ G+D+L + PIS+A++ QRAGRAGRTGPG CYRLYTESAY NEM P+ +P
Sbjct: 879  YGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSPVP 938

Query: 954  EIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 1013
            EIQR NLG+  L +K++ I++LL FDFMDPP  + ++++M QL+ LGAL+  G LT LG 
Sbjct: 939  EIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDLGW 998

Query: 1014 KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 1073
            KM EFPLDPPL+KMLL    L C DE+LTI++M+   ++F+RP+E+  ++D  R KFF P
Sbjct: 999  KMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFFVP 1058

Query: 1074 EGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGK 1133
            E DHLTLL VY+ WK  ++ G WC ++++Q + LR+A++VR QLL I+ + K+++ S G 
Sbjct: 1059 ESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSCGP 1118

Query: 1134 NFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHELVM 1193
            ++  +RKAI + +F ++AR      Y       P ++HPSSAL+     PD+V+YHEL++
Sbjct: 1119 DWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHELIL 1178

Query: 1194 TTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQERIE 1215
            TTKEYM+  T ++P WL EL P +F V D  T M + K++++ E
Sbjct: 1179 TTKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQKEE 1199

[Close]

BLAST of Cp4.1LG07g09280 vs. TAIR10
Match: AT3G62310.1 (AT3G62310.1 RNA helicase family protein)

HSP 1 Score: 699.1 bits (1803), Expect = 4.8e-201
Identity = 350/665 (52.63%), Postives = 486/665 (73.08%), Query Frame = 1


Query: 573  IQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEA-GYTTSGK---- 632
            I E+R++LP++  K+E ++ +++NQ L+++GETGSGKTTQ+ Q++ +A    TS K    
Sbjct: 54   ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113

Query: 633  -IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 692
             +GCTQPRRVAAMSV++RVAEE    +GEEVGY+IRFEDC+ P TV+KY+TDGMLLRE +
Sbjct: 114  LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173

Query: 693  IDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFN 752
             D  L +Y VI+LDEAHERT+ TDVLFGLLK+++K RPDL+L+V SATL+AEKF  YF  
Sbjct: 174  ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233

Query: 753  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQ 812
              +  +PGR  PVEI YT++PE DYL+AA+ TV+QIH+ EP GD+L+FLTG+EEI+ AC+
Sbjct: 234  APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 293

Query: 813  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP-------PGKRKVVVATNIAEA 872
             + + +  LG  V  + ++P+YS LP  MQ +IF+PAP       P  RK+VV+TNIAE 
Sbjct: 294  KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 353

Query: 873  SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 932
            SLTIDGI YVIDPGFAKQ VYNP+  ++SL+++PIS+ASA QR+GRAGRT PGKC+RLYT
Sbjct: 354  SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 413

Query: 933  ESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSL 992
            E ++ N++ P + PEI R NL +T LT+K +GI+DL+ FDFMDPP+P+ L+ A+E L  L
Sbjct: 414  EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 473

Query: 993  GALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 1052
            GALD++G LTK G  M+EFPLDP ++KML+ S +  CS+EIL++ AM+   N F RPRE 
Sbjct: 474  GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 533

Query: 1053 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLS 1112
            Q  AD+ +A+F   EGDHLTLL VY A+K  N    WC+ENF+ +R+++ A +VR+QL+ 
Sbjct: 534  QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593

Query: 1113 IMDKYKLDVVSAGKN----FTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1172
            IM ++ L + S   N    +  IRKA+ AG+F   A  +    Y T+ +NQ V++HPS+ 
Sbjct: 594  IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 653

Query: 1173 LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQERIE 1220
            L   +P+WVIY+E V+T++ ++R VT I  +WLV++A  Y+ +++ P   +KR     IE
Sbjct: 654  L-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRV----IE 713

[Close]

BLAST of Cp4.1LG07g09280 vs. NCBI nr
Match: gi|659070542|ref|XP_008455589.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform X1 [Cucumis melo])

HSP 1 Score: 2240.7 bits (5805), Expect = 0.0e+00
Identity = 1174/1235 (95.06%), Postives = 1196/1235 (96.84%), Query Frame = 1


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVIDDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKELKK+KESDGKK KFRAL I DDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 180
            ELEKEIELE  QK G+RD EDDRY+ RAGDRG+DR  DRDRDRGRDR +DRD DRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRAGDRGRDR--DRDRDRGRDRHKDRDVDRDRDRY 180

Query: 181  RDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDG-DDDHRRSGRPRDRNRKNG 240
            RDRDRDRD D    RD+DRDRRRDRYERDERHGGRDRDDDG DDD+RRSGR RDRNR+NG
Sbjct: 181  RDRDRDRDWD----RDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNG 240

Query: 241  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 300
            YEE+E + GD + GNGNWRGDR     NG+H PV  EPELY VYKGRVSRVMDTGCFVQL
Sbjct: 241  YEENESHRGDVDDGNGNWRGDR-----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQL 300

Query: 301  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 360
            +DFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDL
Sbjct: 301  NDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360

Query: 361  LPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420
            LPLKKKDADDGPRMNPSD+KD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK
Sbjct: 361  LPLKKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420

Query: 421  QLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPV 480
            QL+ASGVLSVSEYPSYDDEGDGLLYQEEGA EEELEIELNEDEP FLQGQSRYSIDMSPV
Sbjct: 421  QLIASGVLSVSEYPSYDDEGDGLLYQEEGA-EEELEIELNEDEPAFLQGQSRYSIDMSPV 480

Query: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540
            KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA
Sbjct: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540

Query: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600
            QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV
Sbjct: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG
Sbjct: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKK 720
            YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+
Sbjct: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQ 720

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
            LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT
Sbjct: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780

Query: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR
Sbjct: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS
Sbjct: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSF
Sbjct: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD
Sbjct: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF
Sbjct: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG
Sbjct: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV
Sbjct: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1200

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Cp4.1LG07g09280 vs. NCBI nr
Match: gi|659070544|ref|XP_008455599.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform X2 [Cucumis melo])

HSP 1 Score: 2230.7 bits (5779), Expect = 0.0e+00
Identity = 1168/1235 (94.57%), Postives = 1188/1235 (96.19%), Query Frame = 1


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVIDDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKELKK+KESDGKK KFRAL I DDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAK 120

Query: 121  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 180
            ELEKEIELE  QK G+RD EDDRY+ RAGDRG            RDRDRDRDRDRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRAGDRG------------RDRDRDRDRDRDRDRY 180

Query: 181  RDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDDG-DDDHRRSGRPRDRNRKNG 240
            RDRDRDRD D    RD+DRDRRRDRYERDERHGGRDRDDDG DDD+RRSGR RDRNR+NG
Sbjct: 181  RDRDRDRDWD----RDKDRDRRRDRYERDERHGGRDRDDDGGDDDYRRSGRQRDRNRRNG 240

Query: 241  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 300
            YEE+E + GD + GNGNWRGDR     NG+H PV  EPELY VYKGRVSRVMDTGCFVQL
Sbjct: 241  YEENESHRGDVDDGNGNWRGDR-----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQL 300

Query: 301  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 360
            +DFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDL
Sbjct: 301  NDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360

Query: 361  LPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420
            LPLKKKDADDGPRMNPSD+KD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK
Sbjct: 361  LPLKKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420

Query: 421  QLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPV 480
            QL+ASGVLSVSEYPSYDDEGDGLLYQEEGA EEELEIELNEDEP FLQGQSRYSIDMSPV
Sbjct: 421  QLIASGVLSVSEYPSYDDEGDGLLYQEEGA-EEELEIELNEDEPAFLQGQSRYSIDMSPV 480

Query: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540
            KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA
Sbjct: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540

Query: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600
            QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV
Sbjct: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG
Sbjct: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKK 720
            YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+
Sbjct: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQ 720

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
            LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT
Sbjct: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780

Query: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR
Sbjct: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS
Sbjct: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSF
Sbjct: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD
Sbjct: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF
Sbjct: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG
Sbjct: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV
Sbjct: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1200

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1213

[Close]

BLAST of Cp4.1LG07g09280 vs. NCBI nr
Match: gi|449442879|ref|XP_004139208.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform X1 [Cucumis sativus])

HSP 1 Score: 2224.5 bits (5763), Expect = 0.0e+00
Identity = 1167/1235 (94.49%), Postives = 1189/1235 (96.28%), Query Frame = 1


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            M  S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVIDDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKELKK+KESDG K KFRAL I DDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDG-KGKFRALAIGDDRERAK 120

Query: 121  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 180
            ELEKEIELE  QK G+RD EDDRY+ RAGDRG  R RDRDRDRGRDR RDRD DRDRDR 
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRAGDRG--RGRDRDRDRGRDRHRDRDVDRDRDRY 180

Query: 181  RDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDD-GDDDHRRSGRPRDRNRKNG 240
            RDRD         DRD+DRDRRRDRY+RDERHGGRDRDDD GDDDHRRSGR RDRNR+NG
Sbjct: 181  RDRD--------WDRDKDRDRRRDRYDRDERHGGRDRDDDGGDDDHRRSGRQRDRNRRNG 240

Query: 241  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 300
            YEE+E + GD E GNGNWRGDR     NG+H PV+ EPELY VYKGRVSRVMDTGCFVQL
Sbjct: 241  YEENESHRGDVEDGNGNWRGDR-----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQL 300

Query: 301  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 360
            +DFRGKEGLVHVSQIATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDL
Sbjct: 301  NDFRGKEGLVHVSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360

Query: 361  LPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420
            LPLKKKDADDGPRMNPSD+KD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK
Sbjct: 361  LPLKKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420

Query: 421  QLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPV 480
            QL+ASGVLSVSEYPSYDDEGDGLLYQEEG AEEELEIELNEDEP FLQGQSRYSIDMSPV
Sbjct: 421  QLIASGVLSVSEYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPAFLQGQSRYSIDMSPV 480

Query: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540
            KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA
Sbjct: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540

Query: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600
            QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV
Sbjct: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG
Sbjct: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKK 720
            YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+
Sbjct: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQ 720

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
            LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT
Sbjct: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780

Query: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR
Sbjct: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS
Sbjct: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSF
Sbjct: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD
Sbjct: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF
Sbjct: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG
Sbjct: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV
Sbjct: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1200

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1218

[Close]

BLAST of Cp4.1LG07g09280 vs. NCBI nr
Match: gi|778666643|ref|XP_011648783.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform X2 [Cucumis sativus])

HSP 1 Score: 2216.4 bits (5742), Expect = 0.0e+00
Identity = 1160/1235 (93.93%), Postives = 1182/1235 (95.71%), Query Frame = 1


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            M  S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVIDDDRERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKELKK+KESDG K KFRAL I DDRERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDG-KGKFRALAIGDDRERAK 120

Query: 121  ELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRD 180
            ELEKEIELE  QK G+RD EDDRY+ RAGDRG          RGRDRDRDRDRDRDR RD
Sbjct: 121  ELEKEIELEAHQKHGNRDVEDDRYRDRAGDRG----------RGRDRDRDRDRDRDRYRD 180

Query: 181  RDRDRDRDRDSYRDRDRDRDRRRDRYERDERHGGRDRDDD-GDDDHRRSGRPRDRNRKNG 240
            RD           DRD+DRDRRRDRY+RDERHGGRDRDDD GDDDHRRSGR RDRNR+NG
Sbjct: 181  RD----------WDRDKDRDRRRDRYDRDERHGGRDRDDDGGDDDHRRSGRQRDRNRRNG 240

Query: 241  YEEDERYGGDAEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQL 300
            YEE+E + GD E GNGNWRGDR     NG+H PV+ EPELY VYKGRVSRVMDTGCFVQL
Sbjct: 241  YEENESHRGDVEDGNGNWRGDR-----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQL 300

Query: 301  SDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDL 360
            +DFRGKEGLVHVSQIATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDL
Sbjct: 301  NDFRGKEGLVHVSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360

Query: 361  LPLKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420
            LPLKKKDADDGPRMNPSD+KD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK
Sbjct: 361  LPLKKKDADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAK 420

Query: 421  QLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPV 480
            QL+ASGVLSVSEYPSYDDEGDGLLYQEEG AEEELEIELNEDEP FLQGQSRYSIDMSPV
Sbjct: 421  QLIASGVLSVSEYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPAFLQGQSRYSIDMSPV 480

Query: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540
            KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA
Sbjct: 481  KIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLA 540

Query: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600
            QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV
Sbjct: 541  QELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQV 600

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG
Sbjct: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKK 720
            YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+
Sbjct: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQ 720

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
            LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT
Sbjct: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780

Query: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR
Sbjct: 781  VLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS
Sbjct: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSF
Sbjct: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD
Sbjct: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF
Sbjct: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG
Sbjct: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV
Sbjct: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKV 1200

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1234
            +DPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1208

[Close]

BLAST of Cp4.1LG07g09280 vs. NCBI nr
Match: gi|470142342|ref|XP_004306870.1| (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Fragaria vesca subsp. vesca])

HSP 1 Score: 2018.8 bits (5229), Expect = 0.0e+00
Identity = 1066/1225 (87.02%), Postives = 1134/1225 (92.57%), Query Frame = 1


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR+CE+VDEFDAKLKE+GAEMP
Sbjct: 5    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELE 128
            DYFVR+LL IIH ILPP+  +E + KK+  ++G KSKF+AL I D+R+R K++++EIE+E
Sbjct: 65   DYFVRTLLTIIHAILPPKAKSENDSKKESTAEGSKSKFKALSIADNRDRVKDIQREIEME 124

Query: 129  LRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRDRGRDRDRDRDRDRDRDRDRDRDRDRDR 188
             ++K+ DR+E  D           +RE DR R RGR+RD DR+R+RDRDRDRDRDRDRDR
Sbjct: 125  TKEKQNDREEWGD-----------EREEDRPRGRGRERDTDRERERDRDRDRDRDRDRDR 184

Query: 189  DSYRDRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRPRDRNRKNGYEEDERYGGD 248
            D  RDRDR R+R RDRY+RDER  GRDR     D  R + R  +++R++ Y ED   G  
Sbjct: 185  D--RDRDR-RERGRDRYDRDER--GRDRHYHDYDKGRHTDRS-NKHRRDDYVED---GDV 244

Query: 249  AEAGNGNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLV 308
             E  +G+ RG  D+  QNG HH   +EPELYKVYKGRVS+VMDTGCFVQ SDFRGKEGLV
Sbjct: 245  REDDDGDRRGSGDQ--QNGLHH--SEEPELYKVYKGRVSKVMDTGCFVQFSDFRGKEGLV 304

Query: 309  HVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKKKDADD 368
            HVSQIATRRI NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQH+G+DLLPLK  + DD
Sbjct: 305  HVSQIATRRIGNAKDVVKRDQEVYVKVISISGQKLSLSMRDVDQHTGQDLLPLKNSE-DD 364

Query: 369  GPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSV 428
              R NPS SKDEGPV RTGLSGI+IVE+DVT PSRRPLKRMSSPE+WEAKQL+ASGVL V
Sbjct: 365  SLRTNPSISKDEGPVTRTGLSGIRIVEEDVTAPSRRPLKRMSSPEKWEAKQLIASGVLGV 424

Query: 429  SEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSL 488
             EYP YD+E DG+L++EEGA EEELEIELNEDEP FL GQ+RYS+DMSPVKIFKNPEGSL
Sbjct: 425  KEYPMYDEETDGMLFEEEGA-EEELEIELNEDEPAFLHGQTRYSVDMSPVKIFKNPEGSL 484

Query: 489  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 548
            SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA
Sbjct: 485  SRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSA 544

Query: 549  YDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 608
            YDMPEWKKDA+GK ++FGQ+SKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG
Sbjct: 545  YDMPEWKKDAFGKTVTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSG 604

Query: 609  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 668
            KTTQVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG
Sbjct: 605  KTTQVTQYLAEAGYTTMGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 664

Query: 669  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRL 728
            PDTVIKYMTDGMLLREILID+NLSQYSV+MLDEAHERTI+TDVLFGLLKKLVKRRPDLRL
Sbjct: 665  PDTVIKYMTDGMLLREILIDENLSQYSVVMLDEAHERTIYTDVLFGLLKKLVKRRPDLRL 724

Query: 729  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 788
            IVTSATLDAEKFS YFFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPE
Sbjct: 725  IVTSATLDAEKFSSYFFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPE 784

Query: 789  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 848
            GD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKR
Sbjct: 785  GDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKR 844

Query: 849  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 908
            KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR
Sbjct: 845  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 904

Query: 909  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 968
            TGPGKCYRLYTESAYRNEMSPTS+PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQA
Sbjct: 905  TGPGKCYRLYTESAYRNEMSPTSVPEIQRINLGTTTLTMKAMGINDLLSFDFMDPPSPQA 964

Query: 969  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1028
            LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII+MIQ
Sbjct: 965  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIISMIQ 1024

Query: 1029 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1088
            TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR
Sbjct: 1025 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1084

Query: 1089 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1148
            RAQDVRKQLLSIMDKYKLDVVSAGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPV
Sbjct: 1085 RAQDVRKQLLSIMDKYKLDVVSAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPV 1144

Query: 1149 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1208
            YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTKMSKRK
Sbjct: 1145 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRK 1203

Query: 1209 RQERIEPLYDRYHEPNSWRLSKRRA 1234
            RQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1205 RQERIEPLYDRYHEPNSWRLSKRRA 1203

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g09280 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEAH5_ARATH	0.0e+00	80.80	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
DHX8_MOUSE	0.0e+00	60.19	ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1	[more]
DHX8_HUMAN	0.0e+00	59.55	ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1	[more]
DHX8_DICDI	0.0e+00	67.17	ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8 PE=3 SV=1	[more]
MOG5_CAEEL	0.0e+00	53.60	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 OS=Caenorhabd...	[more]

BLAST of Cp4.1LG07g09280 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG89_CUCSA	0.0e+00	94.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013240 PE=4 SV=1	[more]
M5X766_PRUPE	0.0e+00	85.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000417mg PE=4 SV=1	[more]
W9QN92_9ROSA	0.0e+00	86.07	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Morus notabilis ...	[more]
A0A061FE18_THECC	0.0e+00	85.37	Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 1 OS=Theobroma cacao...	[more]
U5FPJ0_POPTR	0.0e+00	85.36	ATP-dependent RNA helicase family protein OS=Populus trichocarpa GN=POPTR_0015s0...	[more]

BLAST of Cp4.1LG07g09280 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26560.1	0.0e+00	80.80	ATP-dependent RNA helicase, putative	[more]
AT1G32490.1	1.4e-224	56.95	RNA helicase family protein	[more]
AT2G35340.1	1.7e-219	56.11	helicase domain-containing protein	[more]
AT5G13010.1	5.3e-216	48.54	RNA helicase family protein	[more]
AT3G62310.1	4.8e-201	52.63	RNA helicase family protein	[more]

BLAST of Cp4.1LG07g09280 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659070542\|ref\|XP_008455589.1\|	0.0e+00	95.06	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform ...	[more]
gi\|659070544\|ref\|XP_008455599.1\|	0.0e+00	94.57	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform ...	[more]
gi\|449442879\|ref\|XP_004139208.1\|	0.0e+00	94.49	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform ...	[more]
gi\|778666643\|ref\|XP_011648783.1\|	0.0e+00	93.93	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase isoform ...	[more]
gi\|470142342\|ref\|XP_004306870.1\|	0.0e+00	87.02	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Fragari...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004386	helicase activity
GO:0008026	ATP-dependent helicase activity
GO:0005524	ATP binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR022967	S1_dom
IPR014001	Helicase_ATP-bd
IPR012340	NA-bd_OB-fold
IPR011709	DUF1605
IPR011545	DEAD/DEAH_box_helicase_dom
IPR007502	Helicase-assoc_dom
IPR003029	S1_domain
IPR002464	DNA/RNA_helicase_DEAH_CS
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008026	ATP-dependent helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004386	helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g09280.1	Cp4.1LG07g09280.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 779..910 score: 7.2
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 806..910 score: 1.2
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 771..951 score: 17
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 695..704 scor
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 280..345 score: 3.2
IPR003029	S1 domain	PROFILE	PS50126	S1	coord: 279..348 score: 16
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 972..1060 score: 2.5
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 971..1061 score: 2.1
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 587..736 score: 6.
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 1092..1194 score: 1.9
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	G3DSA:2.40.50.140		coord: 280..359 score: 6.4
IPR012340	Nucleic acid-binding, OB-fold	unknown	SSF50249	Nucleic acid-binding proteins	coord: 275..352 score: 2.57
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 578..762 score: 1.5
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 590..753 score: 2
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 277..348 score: 1.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 579..737 score: 1.2E-54coord: 775..921 score: 4.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 570..1104 score: 9.51E
None	No IPR available	unknown	Coil	Coil	coord: 111..138 score: -coord: 491..511 scor
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 339..1232 score:
None	No IPR available	PANTHER	PTHR18934:SF120	SUBFAMILY NOT NAMED	coord: 339..1232 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g09280	Cucsa.133580	Cucumber (Gy14) v1	cgycpeB0356
Cp4.1LG07g09280	CmaCh12G010970	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g09280	CmaCh05G011730	Cucurbita maxima (Rimu)	cmacpeB789
Cp4.1LG07g09280	CmoCh05G011980	Cucurbita moschata (Rifu)	cmocpeB742
Cp4.1LG07g09280	CmoCh12G011140	Cucurbita moschata (Rifu)	cmocpeB175
Cp4.1LG07g09280	Cla019839	Watermelon (97103) v1	cpewmB806
Cp4.1LG07g09280	Csa2G013240	Cucumber (Chinese Long) v2	cpecuB820
Cp4.1LG07g09280	MELO3C004343	Melon (DHL92) v3.5.1	cpemeB771
Cp4.1LG07g09280	ClCG02G016270	Watermelon (Charleston Gray)	cpewcgB733
Cp4.1LG07g09280	CSPI02G03330	Wild cucumber (PI 183967)	cpecpiB821
Cp4.1LG07g09280	Lsi11G004800	Bottle gourd (USVL1VR-Ls)	cpelsiB659
Cp4.1LG07g09280	MELO3C004343.2	Melon (DHL92) v3.6.1	cpemedB907
Cp4.1LG07g09280	CsaV3_2G004480	Cucumber (Chinese Long) v3	cpecucB1014
Cp4.1LG07g09280	Bhi06G001485	Wax gourd	cpewgoB1006
Cp4.1LG07g09280	CsGy2G003430	Cucumber (Gy14) v2	cgybcpeB271
Cp4.1LG07g09280	Carg17571	Silver-seed gourd	carcpeB1006
Cp4.1LG07g09280	Carg23424	Silver-seed gourd	carcpeB0411

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g09280	Cp4.1LG11g09650	Cucurbita pepo (Zucchini)	cpecpeB139

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g09280	Cucumber (Gy14) v2	cgybcpeB143
Cp4.1LG07g09280	Wax gourd	cpewgoB1072