Carg17571 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg17571
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase, putative
Location	Cucurbita_argyrosperma_scaffold_183 : 330271 .. 335146 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTTTCCACGGCTAACGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCTAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGACGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCCTTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTGGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGGTAGAGGTAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGTTACCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGCGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCAAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCGACACCACCCTATCGACCAAGAACCTGAACTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGACTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGTGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGTTAAAGAGAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCAAAGGATGATGGGCCAGTGGTTAGGACCGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGATTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCTGTTCATGATAATCAGGTTCTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCTGTTGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACAGGACCTGATACCGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCAGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCGGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCTGAGGCCTCGTTGACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGACGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCATGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATGATCTTCTGTCTCCTCATGATATTATCTTTGTTGAACTGTTGTCTTTAGTTACGATTGTCTATTGTTGTCTTGTCTTGCATGCATGCATTTGCCTTTTAACTATTTTGTTTGAACATAAATTTACATGTGCGGAGTAATGATGGCTGCTCTGTTGGGGAGTGCTTCTAAAATTTCCCCTTTTGGAGAAGGGAAAAGTTTTATGACCTGCTAGTTTATTTTCTATTTTATGGGAAAGGAATAACATGAGCTTTAAAGAGGTGGAGATCGTGTGAAGAGGTTTGAGAGGTTGTTAGGCTTAATATCTCTTTGGGGGCATTGGTTATATGATCTTTTTGTAATTATGAGACAGGTCATATAAATTGGAGTGGAGTCCTTTCCTTTAAGGAGTTTAGGTTTGGATGTCTTCTTGTTGGGCTTATAGTGTATATTCCTTCATTTTTCTCTAGCTTCTTTCACAAAAGAAACCATGTAGTTTACACGCTGGTATGTTATCTAGTATAAATATATTTGGTCTGAATAGATTCAGGCTGAACCAGCAAACTATGTATTCTGTTAAGAATCGTGAGATCTCACATTGGTGGGAGAGAGGAACGAAGCATTTCTTATAAGGGGTGTGGAAACCTCTTCCTAGTAGATGCGTTTTAAAACAGTGAGGCTGACGGCAACATATAACGAGCCCAAAGCGGACAATATCTGCTAGTGGTGGGCTTGGGTTGTTACAAATGGTATCAGAGCCAGTCACCGGACGATGTACTAGCGAGGATGCTAGCACCTAATGGGGTGGATTGTGAGATCCCACATTTATAGAAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAAACGAGTTTTAAAACCTTGAGGGGTAGCCCGAAAGGGAAAGCCTAAAGAGGACAACATCTGTTAGTGGTAGGCTTGGGTTGTTACAAGAATACTAGCAAAACGTTGAAGAATTTGGAAAAGGCATCTGAATGAAGTTTCGGCGAGATGCATAATAATGTTTGTATGAAAGTTCGAGTTAAAATGGTTTTGAGGCGTAGGTGGTTTACTGTCTTGTATTCTCCGGATACTAACATCTTACCGTTCCTATGAGTCTCTTCCTTCCCTTTCTAACTCCAACACGTTGTTCCTAATTTCAGGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAAAACCAACCAGTTTATATCCATCCGAGCAGTGCATTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATTAACATGGTTCGTTCTATGCCATATTTGACTGACTTTGTATATAGAAATCCTGTTGTATAA

mRNA sequence

ATGGTTGTTTCCACGGCTAACGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCTAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGACGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCCTTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTGGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGGTAGAGGTAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGTTACCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGCGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCAAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCGACACCACCCTATCGACCAAGAACCTGAACTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGACTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGTGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGTTAAAGAGAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCAAAGGATGATGGGCCAGTGGTTAGGACCGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGATTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCTGTTCATGATAATCAGGTTCTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCTGTTGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACAGGACCTGATACCGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCAGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCGGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCTGAGGCCTCGTTGACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGACGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCATGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAAAACCAACCAGTTTATATCCATCCGAGCAGTGCATTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATTAACATGGTTCGTTCTATGCCATATTTGACTGACTTTGTATATAGAAATCCTGTTGTATAA

Coding sequence (CDS)

ATGGTTGTTTCCACGGCTAACGGCGACGATGGATTGAAGAAACTCGAGTACTTATCCCTTGTCTCTAAGGTATGTTCTGAGCTTGAAACTCATTTAGGTTTCGGAGATAAAGTTCTTGCTGAGTTCATAACGGAGATGGGACGGAGCTGTGAGACGGTGGATGAGTTCGATGCCAAATTGAAAGAGAATGGCGCGGAAATGCCTGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGAACAACGAAAAGGAGTTGAAGAAGGATAAGGAATCAGATGGGAAGAAGAGCAAGTTTCGGGCCTTGGTGATCGATGATGATCGGGAGAGAGCGAAGGAGCTGGAGAAGGAAATTGAGTTGGAGCTTCGCCAGAAGCGTGGGGACAGAGATGAAGAAGATGATCGATACAAGGGGAGGGCCGGGGACAGAGGAAAAGACAGAGAGAGGGACAGAGACAGAGGTAGAGGTAGAGATAGAGATAGAGATAGAGATAGGGATAGGGATAGTTACCGGGATCGGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGCAGGGATCGCGACGATGATGGTGATGATGATCACCGGAGAAGCGGAAGGCAAAGGGATCGGAATAGGAAAAATGGATATGAAGAAGATGAGCGTTATGGGGGTGATGCAGAAGCTGGTAATGGCAATTGGAGAGGTGATAGGGACAAGCATACACAAAATGGGCGACACCACCCTATCGACCAAGAACCTGAACTGTACAAGGTCTACAAGGGTAGAGTTTCCAGAGTGATGGACACGGGTTGCTTTGTCCAACTGAGCGACTTTAGAGGCAAGGAGGGTCTGGTTCATGTTTCTCAGATTGCCACCCGAAGGATTAGCAATGCCAAGGATGTTGTAAAGCGTGATCAAGAGGTTTATGTCAAGGTCATTTCATTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTCGATCAGCATTCTGGTAAGGATTTACTACCGTTAAAGAGAAAAGATGCTGACGATGGTCCTAGAATGAATCCTTCAGATTCAAAGGATGATGGGCCAGTGGTTAGGACCGGCCTTTCTGGGATTAAAATTGTGGAAGATGATGTTACTGTCCCTTCACGCAGACCTTTGAAGCGCATGAGCTCACCTGAGAGATGGGAAGCCAAGCAGCTGATGGCTTCTGGGGTTTTAAGTGTAAGCGAGTATCCTTCTTATGATGACGAGGGAGACGGATTATTATACCAAGAAGAGGGTGCTGCCGAAGAAGAGCTTGAGATTGAGTTGAATGAGGACGAGCCTGAATTTCTGCAAGGCCAGAGCAGATACTCAATTGATATGTCGCCAGTTAAGATCTTTAAAAATCCGGAAGGGTCACTGAGTCGAGCAGCTGCACTTCAATCTGCACTCATTAAGGAGCGTAGAGAAGTTCGTGAGCAGCAGCAGAGGACCATGCTCGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACTGGTGAGAGACATCTTGCACAGGAGCTCAGGGGTGTTGGCTTGTCGGCCTATGATATGCCAGAGTGGAAGAAGGATGCTTATGGAAAAGATATCAGTTTTGGGCAGAAGTCAAAGCTCTCTATCCAGGAACAGAGGCAGAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCTGTTCATGATAATCAGGTTCTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACACAAGTAACTCAGTATCTTGCTGAAGCTGGGTACACAACATCTGGTAAAATTGGATGTACTCAACCACGTAGGGTGGCTGCAATGTCTGTTGCAAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGATATGCTATTCGTTTCGAGGATTGTACAGGACCTGATACCGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAATTTGTCTCAGTACTCCGTAATTATGCTTGATGAAGCTCACGAGAGAACGATCTTCACTGATGTTCTTTTTGGGTTGCTGAAGAAACTTGTGAAAAGGAGACCCGATCTTCGTCTGATCGTCACATCCGCTACTTTAGATGCTGAAAAATTTTCAGGATATTTCTTCAATTGTAATATTTTTACAATTCCTGGGAGAACTTTCCCAGTGGAGATCCTCTATACCAAGCAGCCAGAAACTGATTATCTTGATGCTGCCTTAATCACTGTCTTGCAGATCCACTTGACAGAACCTGAAGGAGACGTACTTCTTTTCTTGACTGGTCAGGAGGAGATTGATTTTGCATGTCAGTCGCTCTACGAGAGAATGAAAGGACTTGGTAAAAACGTTCCCGAGTTAATTATTCTACCAGTCTACAGTGCCTTACCCAGTGAAATGCAGTCCAGGATATTTGAACCGGCTCCTCCGGGTAAAAGGAAAGTTGTAGTGGCTACGAACATTGCTGAGGCCTCGTTGACAATAGATGGAATTTTTTATGTTATTGATCCTGGATTCGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATTACACCAATCTCACAAGCATCAGCCAAACAGCGTGCAGGTCGTGCAGGACGAACAGGACCTGGAAAATGCTACCGCCTCTATACTGAGAGTGCTTATCGCAATGAGATGTCTCCTACATCAATACCAGAAATCCAGAGGATTAATCTTGGTCATACTACTCTTACTATGAAAGCAATGGGGATAAATGATCTTCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCTCTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTTGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAGTTTCCGTTAGATCCACCTTTGTCTAAAATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATCTTGACAATAATTGCTATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAATTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCATGGAAAGCCAAAAACTTTTCAGGCCCCTGGTGTTTTGAGAACTTTGTTCAATCTCGGTCCTTGAGGAGAGCGCAGGACGTGAGGAAACAACTTCTTTCGATTATGGACAAGTATAAATTGGACGTAGTGAGTGCAGGCAAGAATTTCACTCAGATAAGGAAGGCCATCACAGCCGGATTCTTTTTCCATGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGGACTCTAGTCGAAAACCAACCAGTTTATATCCATCCGAGCAGTGCATTATTCCAAAGACAGCCCGACTGGGTCATATACCACGAGCTGGTCATGACGACAAAAGAATACATGCGCGAAGTAACAGTCATAGATCCCAAATGGCTCGTTGAATTAGCTCCAAGATACTTCAAAGTTGCAGATCCAACAAAGATGAGCAAGCGAAAGAGGCAAGAGCGTATCGAACCGCTCTACGACAGATATCACGAACCTAACTCTTGGCGATTGAGTAAGAGACGAGCTTAA

Protein sequence

MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVIDDDRERAKELEKEIELELRQKRGDRDEEDDRYKGRAGDRGKDRERDRDRGRGRDRDRDRDRDRDSYRDRDRDRRRDRYERDERHGGRDRDDDGDDDHRRSGRQRDRNRKNGYEEDERYGGDAEAGNGNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA

Homology

[Close]

BLAST of Carg17571 vs. NCBI nr
Match: XP_022937860.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita moschata])

HSP 1 Score: 2067.7 bits (5356), Expect = 0.0e+00
Identity = 1213/1227 (98.86%), Postives = 1213/1227 (98.86%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV STANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK----------XXXXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK          XXXXXXXXXXXXXXXX
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEG 300
            XXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEG
Sbjct: 241  XXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEG 300

Query: 301  LVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDA 360
            LVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDA
Sbjct: 301  LVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDA 360

Query: 361  DDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVL 420
            DDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVL
Sbjct: 361  DDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVL 420

Query: 421  SVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEG 480
            SVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEG
Sbjct: 421  SVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEG 480

Query: 481  SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL 540
            SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL
Sbjct: 481  SLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGL 540

Query: 541  SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600
            SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG
Sbjct: 541  SAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETG 600

Query: 601  SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660
            SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC
Sbjct: 601  SGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDC 660

Query: 661  TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDL 720
            TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDL
Sbjct: 661  TGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDL 720

Query: 721  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780
            RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE
Sbjct: 721  RLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTE 780

Query: 781  PEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840
            PEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG
Sbjct: 781  PEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPG 840

Query: 841  KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900
            KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA
Sbjct: 841  KRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRA 900

Query: 901  GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960
            GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP
Sbjct: 901  GRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSP 960

Query: 961  QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020
            QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM
Sbjct: 961  QALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAM 1020

Query: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080
            IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS
Sbjct: 1021 IQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRS 1080

Query: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140
            LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ
Sbjct: 1081 LRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQ 1140

Query: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSK 1200
            PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSK
Sbjct: 1141 PVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSK 1200

Query: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1218
            RKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 RKRQERIEPLYDRYHEPNSWRLSKRRA 1227

[Close]

BLAST of Carg17571 vs. NCBI nr
Match: XP_023537932.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2062.0 bits (5341), Expect = 0.0e+00
Identity = 1211/1233 (98.22%), Postives = 1216/1233 (98.62%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK----------------XXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK                XXXXXXXXXX
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSD 300
            XXXXXXXXXXXXXXNWRGDRDKHTQNG+HHP+DQEPELYKVYKGRVSRVMDTGCFVQLSD
Sbjct: 241  XXXXXXXXXXXXXXNWRGDRDKHTQNGQHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSD 300

Query: 301  FRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLP 360
            FRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLP
Sbjct: 301  FRGKEGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLP 360

Query: 361  LKRKDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL 420
            LK+KDADDGPRMNPSDSKD+GPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL
Sbjct: 361  LKKKDADDGPRMNPSDSKDEGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL 420

Query: 421  MASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKI 480
            MASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKI
Sbjct: 421  MASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKI 480

Query: 481  FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQE 540
            FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQE
Sbjct: 481  FKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQE 540

Query: 541  LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLV 600
            LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLV
Sbjct: 541  LRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLV 600

Query: 601  VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660
            VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA
Sbjct: 601  VIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 660

Query: 661  IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLV 720
            IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLV
Sbjct: 661  IRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLV 720

Query: 721  KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780
            KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL
Sbjct: 721  KRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVL 780

Query: 781  QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840
            QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF
Sbjct: 781  QIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF 840

Query: 841  EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900
            EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK
Sbjct: 841  EPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAK 900

Query: 901  QRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDF 960
            QRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDF
Sbjct: 901  QRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDF 960

Query: 961  MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020
            MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI
Sbjct: 961  MDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEI 1020

Query: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080
            LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN
Sbjct: 1021 LTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFEN 1080

Query: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140
            FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR
Sbjct: 1081 FVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYR 1140

Query: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD 1200
            TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD
Sbjct: 1141 TLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD 1200

Query: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1218
            PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 PTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1233

[Close]

BLAST of Carg17571 vs. NCBI nr
Match: XP_022965541.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita maxima])

HSP 1 Score: 2053.9 bits (5320), Expect = 0.0e+00
Identity = 1206/1230 (98.05%), Postives = 1209/1230 (98.29%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV STANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFD KL
Sbjct: 1    MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDVKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK------------XXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELK                XXXXXXXXXX
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEKELKKDKESDGKKSKFRALVXXXXXXXXXX 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK 300
            XXXXXXXXXXNWRGDRDKHTQNGRHHP+DQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK
Sbjct: 241  XXXXXXXXXXNWRGDRDKHTQNGRHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK 300

Query: 301  EGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPL-KR 360
            EGLVHVSQIATRRISNAKD+VKRDQEVYVKVI FSGQKLSLSMRDVDQHSGKDLLPL K+
Sbjct: 301  EGLVHVSQIATRRISNAKDIVKRDQEVYVKVILFSGQKLSLSMRDVDQHSGKDLLPLTKK 360

Query: 361  KDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMAS 420
            KDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMAS
Sbjct: 361  KDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMAS 420

Query: 421  GVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKN 480
            GVLSVSEYPSYDDEGDGLLY EEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKN
Sbjct: 421  GVLSVSEYPSYDDEGDGLLYLEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKN 480

Query: 481  PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG 540
            PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG
Sbjct: 481  PEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRG 540

Query: 541  VGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIG 600
            VGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIG
Sbjct: 541  VGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIG 600

Query: 601  ETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF 660
            ETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF
Sbjct: 601  ETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRF 660

Query: 661  EDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRR 720
            EDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRR
Sbjct: 661  EDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRR 720

Query: 721  PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIH 780
            PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIH
Sbjct: 721  PDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIH 780

Query: 781  LTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPA 840
            LTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPA
Sbjct: 781  LTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPA 840

Query: 841  PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 900
            PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA
Sbjct: 841  PPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRA 900

Query: 901  GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDP 960
            GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDP
Sbjct: 901  GRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDP 960

Query: 961  PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 1020
            PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI
Sbjct: 961  PSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTI 1020

Query: 1021 IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1080
            IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ
Sbjct: 1021 IAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQ 1080

Query: 1081 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLV 1140
            SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLV
Sbjct: 1081 SRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLV 1140

Query: 1141 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTK 1200
            ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTK
Sbjct: 1141 ENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTK 1200

Query: 1201 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1218
            MSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 MSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1230

[Close]

BLAST of Carg17571 vs. NCBI nr
Match: XP_023521965.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo] >XP_023546823.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2012.7 bits (5213), Expect = 0.0e+00
Identity = 1157/1224 (94.53%), Postives = 1174/1224 (95.92%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELK------XXXXXXXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQK +NEKE K                         
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                XXXXX        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  ELVKXXXXXAHQKRGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVH 300
            XXXXX    DRDKHTQNGRH P+D EPELYKVYKGRVSRVMDTGCFVQ++DFRGKEGLVH
Sbjct: 241  XXXXXXXXXDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH 300

Query: 301  VSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDG 360
            VSQ+ATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDLLPLK+KDADDG
Sbjct: 301  VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360

Query: 361  PRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVS 420
            PRMNPS++KDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQL+ASGVLSV+
Sbjct: 361  PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN 420

Query: 421  EYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 480
            +YPSYDDEGDGLLYQEEG AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS
Sbjct: 421  DYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 480

Query: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540
            RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY
Sbjct: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540

Query: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600
            DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK
Sbjct: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600

Query: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660
            TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660

Query: 661  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLI 720
            DTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLK+LVKRRPDLRLI
Sbjct: 661  DTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720

Query: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780
            VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780

Query: 781  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840
            DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK
Sbjct: 781  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840

Query: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900
            VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT
Sbjct: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900

Query: 901  GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960
            GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL
Sbjct: 901  GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960

Query: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020
            ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT
Sbjct: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020

Query: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080
            GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR
Sbjct: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080

Query: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140
            AQDVRKQLLSIMDKYKLDVVSAG+NFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY
Sbjct: 1081 AQDVRKQLLSIMDKYKLDVVSAGRNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140

Query: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1200
            IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR
Sbjct: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1200

Query: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1218
            QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Carg17571 vs. NCBI nr
Match: XP_022946177.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita moschata])

HSP 1 Score: 2011.1 bits (5209), Expect = 0.0e+00
Identity = 1143/1220 (93.69%), Postives = 1161/1220 (95.16%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELK--XXXXXXXXXXXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQK +NEKE K                         
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQI 300
            X     RDKHTQNGRH P+D EPELYKVYKGRVSRVMDTGCFVQ++DFRGKEGLVHVSQ+
Sbjct: 241  XXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQM 300

Query: 301  ATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMN 360
            ATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDLLPLK+KDADDGPRMN
Sbjct: 301  ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN 360

Query: 361  PSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPS 420
            PS++KDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQL+ASGVLSV++YPS
Sbjct: 361  PSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPS 420

Query: 421  YDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAA 480
            YDDEGDGLLYQEEG AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAA
Sbjct: 421  YDDEGDGLLYQEEG-AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAA 480

Query: 481  LQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPE 540
            LQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPE
Sbjct: 481  LQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPE 540

Query: 541  WKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV 600
            WKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV
Sbjct: 541  WKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQV 600

Query: 601  TQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI 660
            TQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI
Sbjct: 601  TQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVI 660

Query: 661  KYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSA 720
            KYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLK+LVKRRPDLRLIVTSA
Sbjct: 661  KYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSA 720

Query: 721  TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLL 780
            TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+LL
Sbjct: 721  TLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILL 780

Query: 781  FLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVA 840
            FLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVA
Sbjct: 781  FLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVA 840

Query: 841  TNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGK 900
            TNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGK
Sbjct: 841  TNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGK 900

Query: 901  CYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAM 960
            CYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAM
Sbjct: 901  CYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAM 960

Query: 961  EQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF 1020
            EQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF
Sbjct: 961  EQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIF 1020

Query: 1021 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1080
            YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV
Sbjct: 1021 YRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1080

Query: 1081 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1140
            RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS
Sbjct: 1081 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1140

Query: 1141 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERI 1200
            SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERI
Sbjct: 1141 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERI 1200

Query: 1201 EPLYDRYHEPNSWRLSKRRA 1218
            EPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 EPLYDRYHEPNSWRLSKRRA 1219

[Close]

BLAST of Carg17571 vs. TAIR10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative)

HSP 1 Score: 1786.2 bits (4625), Expect = 0.0e+00
Identity = 1021/1207 (84.59%), Postives = 1077/1207 (89.23%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
            VRSLL  IH I PP+  +EK+ +                  XXXXXXXXXXXXXXXXXXX
Sbjct: 66   VRSLLTTIHGIYPPKPKSEKKKEEGDDQKFKGLAIKDTKDKXXXXXXXXXXXXXXXXXXX 125

Query: 132  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKHTQNG 251
            XXXXXXXXXXXXX                                      + DK   N 
Sbjct: 186  XXXXXXXXXXXXXEYV-----------------------------------EEDKGGAN- 245

Query: 252  RHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDVVKR 311
                   EPELY+VYKGRV+RVMD GCFVQ   FRGKEGLVHVSQ+ATRR+  AK+ VKR
Sbjct: 246  -------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKR 305

Query: 312  DQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKR-KDADDGPRMNPSDSKDDGPVVRT 371
            D EVYVKVIS S  K SLSMRDVDQ++G+DL+PL++  D DD  R NPS    DG V +T
Sbjct: 306  DMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQVTKT 365

Query: 372  GLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEE 431
            G+SGI+IVE++   PSRRPLK+MSSPERWEAKQL+ASGVL V E+P YD++GDG+LYQEE
Sbjct: 366  GISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEE 425

Query: 432  GAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVR 491
            G AEEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL KERRE+R
Sbjct: 426  G-AEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMR 485

Query: 492  EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFG 551
            EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK  +FG
Sbjct: 486  EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFG 545

Query: 552  QKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSG 611
            Q+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT G
Sbjct: 546  QRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKG 605

Query: 612  KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 671
            KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL
Sbjct: 606  KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 665

Query: 672  IDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFN 731
            ID+NLSQYSVIMLDEAHERTI TDVLFGLLKKL+KRR DLRLIVTSATLDAEKFSGYFFN
Sbjct: 666  IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN 725

Query: 732  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQ 791
            CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEEID ACQ
Sbjct: 726  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQ 785

Query: 792  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGI 851
            SLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEASLTIDGI
Sbjct: 786  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGI 845

Query: 852  FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 911
            +YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE
Sbjct: 846  YYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 905

Query: 912  MSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 971
            M PTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDEEG
Sbjct: 906  MPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEG 965

Query: 972  LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 1031
            LLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQADQK
Sbjct: 966  LLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQK 1025

Query: 1032 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL 1091
            RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSIMDKYKL
Sbjct: 1026 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL 1085

Query: 1092 DVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1151
            DVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY
Sbjct: 1086 DVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1145

Query: 1152 HELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSW 1211
            H+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1146 HDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1168

Query: 1212 RLSKRRA 1218
            RLSKRRA
Sbjct: 1206 RLSKRRA 1168

[Close]

BLAST of Carg17571 vs. TAIR10
Match: AT1G32490.1 (RNA helicase family protein)

HSP 1 Score: 778.1 bits (2008), Expect = 8.0e-225
Identity = 373/655 (56.95%), Postives = 498/655 (76.03%), Query Frame = 0


Query: 541  DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 600
            DA  K     +K+ L  +QE R+SLPIY  + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380  DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439

Query: 601  YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 660
            YL EAGYT  GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   TV+KY
Sbjct: 440  YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499

Query: 661  MTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATL 720
            MTDGMLLRE+L + +L+ YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559

Query: 721  DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFL 780
            DAEKFS YF    IF+ PGR +PVEI YT  PE DY+DAA++T+L IH+ EP GD+L+F 
Sbjct: 560  DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619

Query: 781  TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 840
            TGQEEI+ A + L  R++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620  TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679

Query: 841  IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 900
            IAE SLTIDGI YV+DPGF+K   YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680  IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739

Query: 901  RLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 960
            RLYT   Y N++   ++PE+QR NL    L +K++GI+DL++FDFMDPP  +AL+ ++E 
Sbjct: 740  RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799

Query: 961  LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1020
            L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+   G+IFY
Sbjct: 800  LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859

Query: 1021 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1080
            RP++KQ  AD  R  F     GDH+ LL VY +WK  NFS  WC+EN++Q RS++RA+D+
Sbjct: 860  RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919

Query: 1081 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1140
            R QL  ++++ ++D+ S       +RK+I AGFF H A+      YRT+   Q V+IHP+
Sbjct: 920  RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979

Query: 1141 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1193
            S L Q  P WV+YHELV+T+KEYMR+VT + P+WL+ELAP Y+++ D    + +K
Sbjct: 980  SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034

[Close]

BLAST of Carg17571 vs. TAIR10
Match: AT2G35340.1 (helicase domain-containing protein)

HSP 1 Score: 761.1 bits (1964), Expect = 1.0e-219
Identity = 363/647 (56.11%), Postives = 489/647 (75.58%), Query Frame = 0


Query: 548  SFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 607
            S G+ +   +QE R++LPIY  + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT
Sbjct: 388  SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447

Query: 608  TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 667
              GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   T++KYMTDGMLLR
Sbjct: 448  KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507

Query: 668  EILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGY 727
            E+L + +L  YSVI++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +
Sbjct: 508  ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567

Query: 728  FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDF 787
            F    IF  PGR +PV+I +T  PE DY+DAA+ TVL IH+ EP GDVL+FL GQEEI+ 
Sbjct: 568  FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627

Query: 788  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 847
              ++L  +++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTI
Sbjct: 628  VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687

Query: 848  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 907
            DGI YV+DPGF+K   YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT   Y
Sbjct: 688  DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747

Query: 908  RNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 967
             N++   ++PEIQR NL    L++K++GI++LL+FDFMDPP  +ALI ++E L++LGAL+
Sbjct: 748  YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807

Query: 968  EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQ 1027
            + G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+  G +IFYRP++KQ  
Sbjct: 808  QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 867

Query: 1028 ADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1087
            AD     F     GDH+  L +Y +WK  N+S  WC+EN++Q RS++RA+D+R QL  ++
Sbjct: 868  ADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 927

Query: 1088 DKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1147
            ++ ++DV S       IRK+I AGFF H A+      YRT+   Q V+IHP+S L Q  P
Sbjct: 928  ERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP 987

Query: 1148 DWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1193
             WV+YH+LV+T+KEYMR+VT + P+WL+E+AP Y+++ D    + +K
Sbjct: 988  RWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034

[Close]

BLAST of Carg17571 vs. TAIR10
Match: AT5G13010.1 (RNA helicase family protein)

HSP 1 Score: 752.3 bits (1941), Expect = 4.7e-217
Identity = 400/826 (48.43%), Postives = 561/826 (67.92%), Query Frame = 0


Query: 398  RWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELE--IELNEDEPEFLQGQSRY 457
            +WE +QL+ SG +  +E             Q E  +EEE +  + +++ +P FL G+  Y
Sbjct: 399  QWEDRQLLRSGAVRGTE------------VQTEFDSEEERKAILLVHDTKPPFLDGRVVY 458

Query: 458  SIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE 517
            +    PV   K+P   ++  +   S L+K   E+RE+Q      S  K   R WE     
Sbjct: 459  TKQAEPVMPVKDPTSDMAIISRKGSGLVK---EIREKQ------SANKSRQRFWELAGSN 518

Query: 518  TGERHLAQELRGVGLSAYDMP------------EWKKDA-------YGKDISFGQKSKLS 577
             G       + G+  SA  +             ++K +A        G+ +S    SK +
Sbjct: 519  LG------NILGIEKSAEQIDADTAVVGDDGEVDFKGEAKFAQHMKKGEAVSEFAMSK-T 578

Query: 578  IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQ 637
            + EQRQ LPI+ ++ EL+Q + +NQV+VV+GETGSGKTTQ+TQYL E GYT +G +GCTQ
Sbjct: 579  MAEQRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQ 638

Query: 638  PRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLS 697
            PRRVAAMSVAKRV+EE    LG+++GYAIRFED TGP+TVIKYMTDG+LLRE L D +L 
Sbjct: 639  PRRVAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLD 698

Query: 698  QYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTI 757
            +Y V+++DEAHER++ TDVLFG+LKK+V RR D +LIVTSATL+A+KFS +F +  IF I
Sbjct: 699  KYRVVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNI 758

Query: 758  PGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERM 817
            PGRTFPV ILY+K P  DY++AA+   + IH+T P GD+L+F+TGQ+EI+ AC SL ERM
Sbjct: 759  PGRTFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERM 818

Query: 818  KGL----GKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFY 877
            + L     + +  L+ILP+YS LP+++Q++IF+    G RK +VATNIAE SLT+DGI+Y
Sbjct: 819  EQLVSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYY 878

Query: 878  VIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMS 937
            VID G+ K  V+NP+ G+D+L + PIS+A++ QRAGRAGRTGPG CYRLYTESAY NEM 
Sbjct: 879  VIDTGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEML 938

Query: 938  PTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLL 997
            P+ +PEIQR NLG+  L +K++ I++LL FDFMDPP  + ++++M QL+ LGAL+  G L
Sbjct: 939  PSPVPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGL 998

Query: 998  TKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRA 1057
            T LG KM EFPLDPPL+KMLL    L C DE+LTI++M+   ++F+RP+E+  ++D  R 
Sbjct: 999  TDLGWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAARE 1058

Query: 1058 KFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV 1117
            KFF PE DHLTLL VY+ WK  ++ G WC ++++Q + LR+A++VR QLL I+ + K+++
Sbjct: 1059 KFFVPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIEL 1118

Query: 1118 VSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIY 1177
             S G ++  +RKAI + +F ++AR      Y       P ++HPSSAL+     PD+V+Y
Sbjct: 1119 RSCGPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVY 1178

Query: 1178 HELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQE 1196
            HEL++TTKEYM+  T ++P WL EL P +F V D  T M + K+++
Sbjct: 1179 HELILTTKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQ 1196

[Close]

BLAST of Carg17571 vs. TAIR10
Match: AT3G62310.1 (RNA helicase family protein)

HSP 1 Score: 699.5 bits (1804), Expect = 3.6e-201
Identity = 350/665 (52.63%), Postives = 486/665 (73.08%), Query Frame = 0


Query: 557  IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA-GYTTSGK---- 616
            I E+R++LP++  K+E ++ +++NQ L+++GETGSGKTTQ+ Q++ +A    TS K    
Sbjct: 54   ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113

Query: 617  -IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 676
             +GCTQPRRVAAMSV++RVAEE    +GEEVGY+IRFEDC+ P TV+KY+TDGMLLRE +
Sbjct: 114  LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173

Query: 677  IDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFN 736
             D  L +Y VI+LDEAHERT+ TDVLFGLLK+++K RPDL+L+V SATL+AEKF  YF  
Sbjct: 174  ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233

Query: 737  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQ 796
              +  +PGR  PVEI YT++PE DYL+AA+ TV+QIH+ EP GD+L+FLTG+EEI+ AC+
Sbjct: 234  APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 293

Query: 797  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP-------PGKRKVVVATNIAEA 856
             + + +  LG  V  + ++P+YS LP  MQ +IF+PAP       P  RK+VV+TNIAE 
Sbjct: 294  KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 353

Query: 857  SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 916
            SLTIDGI YVIDPGFAKQ VYNP+  ++SL+++PIS+ASA QR+GRAGRT PGKC+RLYT
Sbjct: 354  SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 413

Query: 917  ESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSL 976
            E ++ N++ P + PEI R NL +T LT+K +GI+DL+ FDFMDPP+P+ L+ A+E L  L
Sbjct: 414  EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 473

Query: 977  GALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 1036
            GALD++G LTK G  M+EFPLDP ++KML+ S +  CS+EIL++ AM+   N F RPRE 
Sbjct: 474  GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 533

Query: 1037 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLS 1096
            Q  AD+ +A+F   EGDHLTLL VY A+K  N    WC+ENF+ +R+++ A +VR+QL+ 
Sbjct: 534  QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593

Query: 1097 IMDKYKLDVVSAGKN----FTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1156
            IM ++ L + S   N    +  IRKA+ AG+F   A  +    Y T+ +NQ V++HPS+ 
Sbjct: 594  IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 653

Query: 1157 LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQERIE 1204
            L   +P+WVIY+E V+T++ ++R VT I  +WLV++A  Y+ +++ P   +KR     IE
Sbjct: 654  L-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRV----IE 713

[Close]

BLAST of Carg17571 vs. Swiss-Prot
Match: sp|Q38953|DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 1786.2 bits (4625), Expect = 0.0e+00
Identity = 1021/1207 (84.59%), Postives = 1077/1207 (89.23%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
            VRSLL  IH I PP+  +EK+ +                  XXXXXXXXXXXXXXXXXXX
Sbjct: 66   VRSLLTTIHGIYPPKPKSEKKKEEGDDQKFKGLAIKDTKDKXXXXXXXXXXXXXXXXXXX 125

Query: 132  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKHTQNG 251
            XXXXXXXXXXXXX                                      + DK   N 
Sbjct: 186  XXXXXXXXXXXXXEYV-----------------------------------EEDKGGAN- 245

Query: 252  RHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDVVKR 311
                   EPELY+VYKGRV+RVMD GCFVQ   FRGKEGLVHVSQ+ATRR+  AK+ VKR
Sbjct: 246  -------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKR 305

Query: 312  DQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKR-KDADDGPRMNPSDSKDDGPVVRT 371
            D EVYVKVIS S  K SLSMRDVDQ++G+DL+PL++  D DD  R NPS    DG V +T
Sbjct: 306  DMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQVTKT 365

Query: 372  GLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEE 431
            G+SGI+IVE++   PSRRPLK+MSSPERWEAKQL+ASGVL V E+P YD++GDG+LYQEE
Sbjct: 366  GISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEE 425

Query: 432  GAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVR 491
            G AEEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL KERRE+R
Sbjct: 426  G-AEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERREMR 485

Query: 492  EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFG 551
            EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK  +FG
Sbjct: 486  EQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPTFG 545

Query: 552  QKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSG 611
            Q+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT G
Sbjct: 546  QRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKG 605

Query: 612  KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 671
            KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL
Sbjct: 606  KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 665

Query: 672  IDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFN 731
            ID+NLSQYSVIMLDEAHERTI TDVLFGLLKKL+KRR DLRLIVTSATLDAEKFSGYFFN
Sbjct: 666  IDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYFFN 725

Query: 732  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQ 791
            CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+L+FLTGQEEID ACQ
Sbjct: 726  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQ 785

Query: 792  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGI 851
            SLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEASLTIDGI
Sbjct: 786  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGI 845

Query: 852  FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 911
            +YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE
Sbjct: 846  YYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 905

Query: 912  MSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 971
            M PTSIPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDEEG
Sbjct: 906  MPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDEEG 965

Query: 972  LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 1031
            LLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQADQK
Sbjct: 966  LLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQK 1025

Query: 1032 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL 1091
            RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSIMDKYKL
Sbjct: 1026 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKL 1085

Query: 1092 DVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1151
            DVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY
Sbjct: 1086 DVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1145

Query: 1152 HELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSW 1211
            H+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQERIEPLYDRYHEPNSW
Sbjct: 1146 HDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSW 1168

Query: 1212 RLSKRRA 1218
            RLSKRRA
Sbjct: 1206 RLSKRRA 1168

[Close]

BLAST of Carg17571 vs. Swiss-Prot
Match: sp|Q14562|DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 1330.5 bits (3442), Expect = 0.0e+00
Identity = 763/1206 (63.27%), Postives = 932/1206 (77.28%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L +NGAE  D  
Sbjct: 22   LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81

Query: 72   VRSLLRIIHLILPPQKNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
            + +LLR+I  + PP K +  +                                       
Sbjct: 82   ISNLLRLIQTMRPPAKPSTSK-DPVVKPKTEKEKLKELFPVLCQPDNPSVRTMLDEDDVK 141

Query: 132  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 142  VAVDVLKELEALMPSAAGQEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKHTQNG 251
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         W   RDKH    
Sbjct: 202  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKYGERNLDRW---RDKHVD-- 261

Query: 252  RHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK-EGLVHVSQIATR-RISNAKDVV 311
               P  +EP +  +Y G+V+ +M  GCFVQL   R + EGLVH+S++    R++N  DVV
Sbjct: 262  --RPPPEEPTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVV 321

Query: 312  KRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPVVR 371
             + Q V VKV+SF+G K SLSM+DVDQ +G+DL P +R++         S    D P   
Sbjct: 322  SKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNEETSMRNPDRPTHL 381

Query: 372  TGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQE 431
            + +S  ++ +D +    R+ L R+S PE+WE KQ++A+ VLS  E+P +D+E  G+L + 
Sbjct: 382  SLVSAPEVEDDSL---ERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFDEE-TGILPKV 441

Query: 432  EGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREV 491
            +   +E+LEIEL E+EP FL+G ++ S+DMSP+KI KNP+GSLS+AA +QSAL KERRE+
Sbjct: 442  DDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERREL 501

Query: 492  REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAY-GKDIS 551
            ++ Q+   +DSIP  LN+ W DP+P+   R +A  +RG+G+   D+PEWKK A+ G   S
Sbjct: 502  KQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKKHAFGGNKAS 561

Query: 552  FGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 611
            +G+K+++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+
Sbjct: 562  YGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTS 621

Query: 612  SGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 671
             GKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDCT P+TVIKYMTDGMLLRE
Sbjct: 622  RGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRE 681

Query: 672  ILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYF 731
             LID +L+QY++IMLDEAHERTI TDVLFGLLKK V++R D++LIVTSATLDA KFS YF
Sbjct: 682  CLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYF 741

Query: 732  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFA 791
            +   IFTIPGRT+PVEILYTK+PETDYLDA+LITV+QIHLTEP GD+L+FLTGQEEID A
Sbjct: 742  YEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTA 801

Query: 792  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTID 851
            C+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+PAPPG RKVV+ATNIAE SLTID
Sbjct: 802  CEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTID 861

Query: 852  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 911
            GI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRAGRTGPGKCYRLYTE AYR
Sbjct: 862  GIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYR 921

Query: 912  NEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 971
            +EM  T++PEIQR NL  T L++KAMGINDLLSFDFMD P  + LI+AMEQLY+LGALD+
Sbjct: 922  DEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDD 981

Query: 972  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1031
            EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M+   N+FYRP++KQA AD
Sbjct: 982  EGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALAD 1041

Query: 1032 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1091
            QK+AKF Q EGDHLTLLAVY +WK   FS PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++
Sbjct: 1042 QKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRH 1101

Query: 1092 KLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1151
            KLDVVS GK+  +++KAI +GFF +AA+KDPQEGYRTL++ Q VYIHPSSALF RQP+WV
Sbjct: 1102 KLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWV 1161

Query: 1152 IYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPN 1211
            +YHELV+TTKEYMREVT IDP+WLVE AP +FKV+DPTK+SK+K+Q+R+EPLY+RY EPN
Sbjct: 1162 VYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPN 1215

Query: 1212 SWRLSK 1215
            +WR+S+
Sbjct: 1222 AWRISR 1215

[Close]

BLAST of Carg17571 vs. Swiss-Prot
Match: sp|A2A4P0|DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 1325.8 bits (3430), Expect = 0.0e+00
Identity = 778/1222 (63.67%), Postives = 950/1222 (77.74%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
            L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +     T D F A L +NGAE  D  
Sbjct: 22   LAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSL 81

Query: 72   VRSLLRIIHLILPPQKNN--------EKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 131
            + +LLR+I  + PP K +         K  K                             
Sbjct: 82   ISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSARTMLDEEDVKV 141

Query: 132  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 142  AVDVLKELEALMPSAAGQEKQRDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 201

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGD 251
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  R D
Sbjct: 202  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRKD 261

Query: 252  RDKHTQNG------RH--HPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK-EGLVHV 311
            R+K+ +        +H   P  +EP +  +Y G+V+ +M  GCFVQL   R + EGLVH+
Sbjct: 262  REKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHI 321

Query: 312  SQIATR-RISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDG 371
            S++    R++N  DVV + Q V VKV+SF+G K SLSM+DVDQ +G+DL P +R++    
Sbjct: 322  SELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGE 381

Query: 372  PRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVS 431
                 S    D P   + +S  ++ +D +    R+ L R+S PE+WE KQ++A+ VLS  
Sbjct: 382  TNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKWEIKQMIAANVLSKE 441

Query: 432  EYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 491
            E+P +D+E  G+L + +   +E+LEIEL E+EP FL+G ++ S+DMSP+KI KNP+GSLS
Sbjct: 442  EFPDFDEE-TGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLS 501

Query: 492  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 551
            +AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DP+P+   R +A  +RG+G+   
Sbjct: 502  QAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPN 561

Query: 552  DMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSG 611
            D+PEWKK A+ G   S+G+K+++SI EQR+SLPIYKLK++L+QAVHDNQ+L+VIGETGSG
Sbjct: 562  DIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSG 621

Query: 612  KTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTG 671
            KTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVGY IRFEDCT 
Sbjct: 622  KTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTS 681

Query: 672  PDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRL 731
            P+TVIKYMTDGMLLRE LID +L+QY++IMLDEAHERTI TDVLFGLLKK V++R D++L
Sbjct: 682  PETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKL 741

Query: 732  IVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPE 791
            IVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA+LITV+QIHLTEP 
Sbjct: 742  IVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPP 801

Query: 792  GDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKR 851
            GD+L+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+RIF+PAPPG R
Sbjct: 802  GDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSR 861

Query: 852  KVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGR 911
            KVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA AKQRAGRAGR
Sbjct: 862  KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGR 921

Query: 912  TGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQA 971
            TGPGKCYRLYTE AYR+EM  T++PEIQR NL  T L++KAMGINDLLSFDFMD P  + 
Sbjct: 922  TGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMET 981

Query: 972  LISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQ 1031
            LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+E+LTI++M+ 
Sbjct: 982  LITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLS 1041

Query: 1032 TGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLR 1091
              N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS PWC+ENF+Q+RSLR
Sbjct: 1042 VQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLR 1101

Query: 1092 RAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPV 1151
            RAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KDPQEGYRTL++ Q V
Sbjct: 1102 RAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVV 1161

Query: 1152 YIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1211
            YIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP +FKV+DPTK+SK+K
Sbjct: 1162 YIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQK 1221

Query: 1212 RQERIEPLYDRYHEPNSWRLSK 1215
            +Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1222 KQQRLEPLYNRYEEPNAWRISR 1239

[Close]

BLAST of Carg17571 vs. Swiss-Prot
Match: sp|Q54F05|DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)

HSP 1 Score: 1312.0 bits (3394), Expect = 0.0e+00
Identity = 650/967 (67.22%), Postives = 786/967 (81.28%), Query Frame = 0


Query: 256  IDQEPELYKVYKGRVSRVMDTGCFVQLSDFRG-KEGLVHVSQIATRR--ISNAKDVVKRD 315
            ID+EP LYK+Y G+VS + D GCFV L    G ++GLVH+SQI + R  +++  DVVKR+
Sbjct: 195  IDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGRTKLNHPSDVVKRN 254

Query: 316  QEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKR-KDADDGPRMNPSDSKDDGPVVRTG 375
            Q+V VK++S +  K+SLSM+DVDQ +G+DL P +  +                       
Sbjct: 255  QQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSXXXXXXXXXXXXXXXX 314

Query: 376  LSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEG 435
                                R++SP+RW  KQL+ASG+LSV E P+YD E  GL+  +E 
Sbjct: 315  XXXXXXXXXXXXXXXXXXXXRIASPDRWGYKQLIASGILSVPEMPNYDKE-VGLVNHDEE 374

Query: 436  AAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVRE 495
              EE+ +IE NEDEP+FL+G       +SP+KI K P GSL RAA+ Q+AL KER+E + 
Sbjct: 375  QPEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKN 434

Query: 496  QQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD--MPEWKKDAYGKDISF 555
            QQ+  M+DSIPKDL+ PW DPMPE GERHLAQE+R +     D  +PEWKK   G  I +
Sbjct: 435  QQRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQGSHIQY 494

Query: 556  GQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTS 615
            G+ +  SI+EQR+SLPI+ L++  +QAV ++Q+LVVIGETGSGKTTQ+ QYLAEAGY T 
Sbjct: 495  GKATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTR 554

Query: 616  GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREI 675
            GKIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P+T+IK+MTDG+LLRE 
Sbjct: 555  GKIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLREC 614

Query: 676  LIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFF 735
            L+D NLS YSVI+LDEAHERTI TDVLFGLLK+ ++RRP+L++++TSATL+AEKFS YF 
Sbjct: 615  LLDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFM 674

Query: 736  NCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFAC 795
            N  +F IPGRTFPV+I YTK PE DYLDA+LITV+QIHL+EP GD+LLFLTGQEEID AC
Sbjct: 675  NAQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAAC 734

Query: 796  QSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDG 855
            Q LYERMK LG NVP+LIILPVYSALPSEMQ++IFEPAPPG RKVV+ATNIAE SLTIDG
Sbjct: 735  QILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDG 794

Query: 856  IFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRN 915
            I+YVIDPGF+KQ  +NPK G+DSLV+ PISQA+A+QR+GRAGRTGPGKCYRLYTESA++N
Sbjct: 795  IYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKN 854

Query: 916  EMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEE 975
            EM  +SIPEIQR NLG+T LTMKAMGINDLL+FDFMDPP  Q L+SAMEQLYSLGALDEE
Sbjct: 855  EMLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEE 914

Query: 976  GLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQ 1035
            GLLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+   N+FYRP+EKQA ADQ
Sbjct: 915  GLLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQ 974

Query: 1036 KRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYK 1095
            K+AKFFQPEGDHLTLL VYE+WK   FS PWCFENFVQ+RSLRRAQDVRKQL++IMD+YK
Sbjct: 975  KKAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYK 1034

Query: 1096 LDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVI 1155
            LD++SAG+N+T+I+KAI +GFF +A++KDP EGY+TLVE QPVYIHPSS LF R PDWVI
Sbjct: 1035 LDIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVI 1094

Query: 1156 YHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNS 1215
            YHELVMTTKEYMREV  IDPKWLVELAP++FK +DP K+SKRKR+E+IEPLYD+Y++PN+
Sbjct: 1095 YHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEPLYDKYNDPNA 1154

Query: 1216 WRLSKRR 1217
            WR SKR+
Sbjct: 1155 WRPSKRK 1160

HSP 2 Score: 52.0 bits (123), Expect = 5.5e-05
Identity = 24/68 (35.29%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPDYF 71
          + KLE + L S+VC+ELE  +G GDK+LAEF+  +      + +F+  + EN  + P+  
Sbjct: 1  MDKLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESL 60

Query: 72 VRSLLRII 80
             L  +I
Sbjct: 61 SSHLFNLI 68

[Close]

BLAST of Carg17571 vs. Swiss-Prot
Match: sp|A1Z9L3|DHX8_DROME (ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 SV=1)

HSP 1 Score: 1258.0 bits (3254), Expect = 0.0e+00
Identity = 770/1244 (61.90%), Postives = 923/1244 (74.20%), Query Frame = 0


Query: 10   DGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMPD 69
            D L+KLEYLSLVSK+C+EL+ HLG  DK LAEFI ++     T D F   L +NGAE PD
Sbjct: 2    DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPD 61

Query: 70   YFVRSLLRIIHLILPPQ------------------------------KNNEKELKXXXXX 129
              V++L RII+L+ P +                               N+    K     
Sbjct: 62   SLVQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDD 121

Query: 130  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
                                                              XXXXXXXXXX
Sbjct: 122  DEKVKAKPEKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSXXXXXXXXXX 181

Query: 190  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 249
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241

Query: 250  XXXXXXXXXXXXXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCF 309
            XXXXXXXXXXXXXXXXXXX                 +  +PE  K+Y G+++ ++  GCF
Sbjct: 242  XXXXXXXXXXXXXXXXXXXXXXXXXCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGCF 301

Query: 310  VQLSDFRGK-EGLVHVSQI-ATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQH 369
            VQL   R + EGLVH+SQ+ A  R+++  +VV R+Q V VKV+S +GQK+SLSM++VDQ 
Sbjct: 302  VQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQD 361

Query: 370  SGKDLLPLKRKDADDGPRMNPSDSKDDGPVVRT----GLSGIKIVEDDVTVPSRRPLKRM 429
            SGKDL PL     DD    +  D   DGP   +     L G  +  D+    SR+ + R+
Sbjct: 362  SGKDLNPLSHAPEDD---ESLRDRNPDGPFSSSTSMLNLQGNGMEGDE--HESRKRVTRI 421

Query: 430  SSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQS 489
            SSPERWE KQ+++SGVL  SE P +D+E  GLL ++E   E ++EIE+ E+EP FL G  
Sbjct: 422  SSPERWEIKQMISSGVLDRSEMPDFDEE-TGLLPKDED-DEADIEIEIVEEEPPFLSGHG 481

Query: 490  RYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPM 549
            R   D+SPV+I KNP+GSL++AA +QSAL KERRE +  Q+   ++++P  LN+ W DP+
Sbjct: 482  RALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPL 541

Query: 550  PETGERHLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKE 609
            PE   R LA  +RG+  +  ++PEWKK    GK  SFG+K+ L++ EQRQSLPIYKL+ +
Sbjct: 542  PEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDD 601

Query: 610  LIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEE 669
            LI+AV DNQ+L+VIGETGSGKTTQ+TQYL E G+T  GKIGCTQPRRVAAMSVAKRVAEE
Sbjct: 602  LIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEE 661

Query: 670  FGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIF 729
            +GCRLG+EVGY IRFEDCT P+T+IKYMTDGMLLRE L++  L  YSVIMLDEAHERTI 
Sbjct: 662  YGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIH 721

Query: 730  TDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE 789
            TDVLFGLLK  V++RP+L+LIVTSATLDA KFS YFF   IFTIPGRTFPVE+LYTK+PE
Sbjct: 722  TDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPE 781

Query: 790  TDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 849
            TDYLDA+LITV+QIHL EP GD+LLFLTGQEEID AC+ LYERMK LG +VPELIILPVY
Sbjct: 782  TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 841

Query: 850  SALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 909
            SALPSEMQ+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN K G+DS
Sbjct: 842  SALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 901

Query: 910  LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMK 969
            LV+TPISQA+AKQRAGRAGRTGPGK YRLYTE AYR+EM PT +PEIQR NL  T L +K
Sbjct: 902  LVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLK 961

Query: 970  AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 1029
             MGINDLL FDFMD P  ++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+P LSKML
Sbjct: 962  TMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKML 1021

Query: 1030 LASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK 1089
            + SV L CSDEILTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK
Sbjct: 1022 IMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWK 1081

Query: 1090 AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFF 1149
               FS  WC+ENFVQ R+L+R+QDVRKQLL IMD++KLDVVSAGKN  +I+KAI +GFF 
Sbjct: 1082 NNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFR 1141

Query: 1150 HAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWL 1209
            +AA+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT IDPKWL
Sbjct: 1142 NAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWL 1201

Query: 1210 VELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1217
            VE AP +F+ +DPTK+SK K+ +R+EPLY++Y EPN+WR+S+ R
Sbjct: 1202 VEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVR 1238

[Close]

BLAST of Carg17571 vs. TrEMBL
Match: tr|A0A1S3C2I4|A0A1S3C2I4_CUCME (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo OX=3656 GN=LOC103495726 PE=4 SV=1)

HSP 1 Score: 2007.3 bits (5199), Expect = 0.0e+00
Identity = 1173/1229 (95.44%), Postives = 1185/1229 (96.42%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            MV S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKEL-----------KXXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQK ++EKEL           K             X
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAX 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGK 300
            XXXXXXX   NWRGDR     NGRH P+  EPELY VYKGRVSRVMDTGCFVQL+DFRGK
Sbjct: 241  XXXXXXXGNGNWRGDR-----NGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRGK 300

Query: 301  EGLVHVSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRK 360
            EGLVHVSQIATRRISNAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDLLPLK+K
Sbjct: 301  EGLVHVSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKK 360

Query: 361  DADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASG 420
            DADDGPRMNPSD+KDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL+ASG
Sbjct: 361  DADDGPRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASG 420

Query: 421  VLSVSEYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNP 480
            VLSVSEYPSYDDEGDGLLYQEEG AEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNP
Sbjct: 421  VLSVSEYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNP 480

Query: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540
            EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV
Sbjct: 481  EGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGV 540

Query: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGE 600
            GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGE
Sbjct: 541  GLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGE 600

Query: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660
            TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE
Sbjct: 601  TGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFE 660

Query: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRP 720
            DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+LVKRRP
Sbjct: 661  DCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRP 720

Query: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780
            DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL
Sbjct: 721  DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHL 780

Query: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840
            TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP
Sbjct: 781  TEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP 840

Query: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900
            PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG
Sbjct: 841  PGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAG 900

Query: 901  RAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960
            RAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP
Sbjct: 901  RAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPP 960

Query: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020
            SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII
Sbjct: 961  SPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTII 1020

Query: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080
            AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS
Sbjct: 1021 AMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQS 1080

Query: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140
            RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE
Sbjct: 1081 RSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVE 1140

Query: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKM 1200
            NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKM
Sbjct: 1141 NQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKM 1200

Query: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1218
            SKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 SKRKRQERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Carg17571 vs. TrEMBL
Match: tr|A0A0A0LG89|A0A0A0LG89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1)

HSP 1 Score: 1997.6 bits (5174), Expect = 0.0e+00
Identity = 1176/1224 (96.08%), Postives = 1191/1224 (97.30%), Query Frame = 0


Query: 1    MVVSTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60
            M  S ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCE+VDEFD KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKNNEK-------ELKXXXXXXXXXXXXXXXXXXX 120
            KENGAEMPDYFVRSLLRIIHLILPPQK + +          XXXXXXXXXXXXXXXXXXX
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV 240

Query: 241  XXXXXNWRGDRDKHTQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVH 300
                 NWRGDR     NGRH P++ EPELY VYKGRVSRVMDTGCFVQL+DFRGKEGLVH
Sbjct: 241  EDGNGNWRGDR-----NGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVH 300

Query: 301  VSQIATRRISNAKDVVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDG 360
            VSQIATRRI+NAKDVVKRDQEVYVKVIS SGQKLSLSMRDVDQHSGKDLLPLK+KDADDG
Sbjct: 301  VSQIATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360

Query: 361  PRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVS 420
            PRMNPSD+KDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQL+ASGVLSVS
Sbjct: 361  PRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVS 420

Query: 421  EYPSYDDEGDGLLYQEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLS 480
            EYPSYDDEGDGLLYQEEG AEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSLS
Sbjct: 421  EYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLS 480

Query: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540
            RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY
Sbjct: 481  RAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAY 540

Query: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGK 600
            DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGK
Sbjct: 541  DMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGK 600

Query: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660
            TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP
Sbjct: 601  TTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGP 660

Query: 661  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLI 720
            DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLK+LVKRRPDLRLI
Sbjct: 661  DTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLI 720

Query: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780
            VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG
Sbjct: 721  VTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEG 780

Query: 781  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840
            DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK
Sbjct: 781  DVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRK 840

Query: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900
            VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT
Sbjct: 841  VVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRT 900

Query: 901  GPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960
            GPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL
Sbjct: 901  GPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQAL 960

Query: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020
            ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT
Sbjct: 961  ISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT 1020

Query: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080
            GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR
Sbjct: 1021 GNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRR 1080

Query: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140
            AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY
Sbjct: 1081 AQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVY 1140

Query: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKR 1200
            IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKR
Sbjct: 1141 IHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKR 1200

Query: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1218
            QERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 QERIEPLYDRYHEPNSWRLSKRRA 1218

[Close]

BLAST of Carg17571 vs. TrEMBL
Match: tr|A0A2P6SGE4|A0A2P6SGE4_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0351781 PE=4 SV=1)

HSP 1 Score: 1904.4 bits (4932), Expect = 0.0e+00
Identity = 1076/1209 (89.00%), Postives = 1115/1209 (92.22%), Query Frame = 0


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR+CE+VDEFDAKLKE+GAEMP
Sbjct: 5    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
            DYFVR+LL IIH ILPP+  +E + K                                  
Sbjct: 65   DYFVRTLLTIIHAILPPKAKSENDSK----KESTAEGSKSKFKALSIADNRDRVKDIQRE 124

Query: 129  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 125  IELEAKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKHT 248
            XXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXX        + RG RD+  
Sbjct: 185  XXXXXXXXXXXXXXXXXXXXXXXXXXHTDRSXXXXXXXXXXXGDVREDDVDRRGSRDQ-- 244

Query: 249  QNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDV 308
            +NG HH    EPELYKVYKGRVS+VMDTGCFVQ SDFRGKEGLVHVSQIATRRI NAKDV
Sbjct: 245  RNGLHH--SDEPELYKVYKGRVSKVMDTGCFVQFSDFRGKEGLVHVSQIATRRIGNAKDV 304

Query: 309  VKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPVV 368
            VKRDQEVYVKVIS SGQKLSLSMRDVDQH+GKDLLPLK+   DD  R NPS SKDDGPV 
Sbjct: 305  VKRDQEVYVKVISISGQKLSLSMRDVDQHTGKDLLPLKKNSEDDSLRTNPSISKDDGPVT 364

Query: 369  RTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQ 428
            RTGLSGI+IVE+DVT PSRRPLKRMSSPE+WEAKQL+ASGVL V EYP YD+E DG+LY+
Sbjct: 365  RTGLSGIRIVEEDVTAPSRRPLKRMSSPEKWEAKQLIASGVLGVKEYPMYDEETDGMLYE 424

Query: 429  EEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERRE 488
            EEG AEEELEIELNEDEP FLQGQ+RYS DMSPVKIFKNPEGSLSRAAALQSALIKERRE
Sbjct: 425  EEG-AEEELEIELNEDEPAFLQGQTRYSADMSPVKIFKNPEGSLSRAAALQSALIKERRE 484

Query: 489  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDIS 548
            VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK ++
Sbjct: 485  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTVT 544

Query: 549  FGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 608
            FGQ+SKLSIQEQRQSLPIYKLKKEL+QAVH+NQVLVVIGETGSGKTTQVTQYLAEAGYTT
Sbjct: 545  FGQRSKLSIQEQRQSLPIYKLKKELVQAVHENQVLVVIGETGSGKTTQVTQYLAEAGYTT 604

Query: 609  SGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 668
             GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE
Sbjct: 605  MGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 664

Query: 669  ILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYF 728
            IL+D+NLSQYSV+MLDEAHERTI TDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYF
Sbjct: 665  ILLDENLSQYSVVMLDEAHERTIHTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYF 724

Query: 729  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFA 788
            F+CNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGD+LLFLTGQEEIDFA
Sbjct: 725  FDCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFA 784

Query: 789  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTID 848
            CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLTID
Sbjct: 785  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID 844

Query: 849  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 908
            GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR
Sbjct: 845  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 904

Query: 909  NEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 968
            NEMSPTS+PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE
Sbjct: 905  NEMSPTSVPEIQRINLGTTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 964

Query: 969  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1028
            EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD
Sbjct: 965  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1024

Query: 1029 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1088
            QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY
Sbjct: 1025 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1084

Query: 1089 KLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1148
            KLDVVSAGKNFT+IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV
Sbjct: 1085 KLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1144

Query: 1149 IYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPN 1208
            IYHELVMTTKEYMREVTV+DPKWLVELAPR+F VADPTKMSKRKRQERIEPLYDRYHEPN
Sbjct: 1145 IYHELVMTTKEYMREVTVVDPKWLVELAPRFFTVADPTKMSKRKRQERIEPLYDRYHEPN 1204

Query: 1209 SWRLSKRRA 1218
            SWRLSKRRA
Sbjct: 1205 SWRLSKRRA 1204

[Close]

BLAST of Carg17571 vs. TrEMBL
Match: tr|A0A2P6QSS4|A0A2P6QSS4_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400041 PE=4 SV=1)

HSP 1 Score: 1876.7 bits (4860), Expect = 0.0e+00
Identity = 1048/1209 (86.68%), Postives = 1090/1209 (90.16%), Query Frame = 0


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR+C  VDEFDAKLKENGAEMP
Sbjct: 5    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCGNVDEFDAKLKENGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
            DYFVR+LL IIH ILPP+  +E +                                    
Sbjct: 65   DYFVRTLLTIIHAILPPKPKSEND--------------------SMIDSTTEGKKTKFKA 124

Query: 129  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 125  LSIADNRDRVNDLQREIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKHT 248
            XXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXX          
Sbjct: 185  XXXXXXXXXXXXXXXXXXXXXXXXXXGRHTDRSNKHRRDGYXXXXXXXXXXXXXXXXXXX 244

Query: 249  QNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKDV 308
                HH    EPELY+VYKGRVS+VMDTGCFVQ SDFRGKEGLVHVSQ+ATRRI NAKDV
Sbjct: 245  XXXLHH--SDEPELYQVYKGRVSKVMDTGCFVQFSDFRGKEGLVHVSQMATRRIGNAKDV 304

Query: 309  VKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPVV 368
            VKRDQEVYVKVIS SGQKLSLSMRDVDQH+GKDLLPLK+   DD  R NPS SK DGPV 
Sbjct: 305  VKRDQEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAHRTNPSVSKHDGPVT 364

Query: 369  RTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLYQ 428
            RTGLSGI+IVE++   PSRRPLKRMSSPE+WEAKQL+ASGVL V+EYP YD+E +G+LY+
Sbjct: 365  RTGLSGIRIVEENNVAPSRRPLKRMSSPEKWEAKQLIASGVLGVTEYPMYDEETEGMLYE 424

Query: 429  EEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERRE 488
            EEG AEEELEIELNEDEP FLQGQSRYS+DMSPVKIFKNPEGSLSRAAALQSALIKERRE
Sbjct: 425  EEG-AEEELEIELNEDEPAFLQGQSRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERRE 484

Query: 489  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDIS 548
            VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK +S
Sbjct: 485  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTVS 544

Query: 549  FGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 608
            FGQ+SKLS+QEQRQSLPIYKLKKEL+QAVH+NQVLVVIGETGSGKTTQVTQYLAEAGYTT
Sbjct: 545  FGQRSKLSLQEQRQSLPIYKLKKELVQAVHENQVLVVIGETGSGKTTQVTQYLAEAGYTT 604

Query: 609  SGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 668
             GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE
Sbjct: 605  MGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 664

Query: 669  ILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGYF 728
            ILID+NLSQYSV+MLDEAHERTI TDVLFGLLKKL+KRRPDLRLIVTSATLDAEKFSGYF
Sbjct: 665  ILIDENLSQYSVVMLDEAHERTIHTDVLFGLLKKLIKRRPDLRLIVTSATLDAEKFSGYF 724

Query: 729  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFA 788
            F+CNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGD+LLFLTGQEEIDF+
Sbjct: 725  FDCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDFS 784

Query: 789  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTID 848
            CQSL+ERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLTID
Sbjct: 785  CQSLFERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTID 844

Query: 849  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 908
            GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR
Sbjct: 845  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 904

Query: 909  NEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 968
            NEMSPTS+PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE
Sbjct: 905  NEMSPTSVPEIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 964

Query: 969  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1028
            EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQAD
Sbjct: 965  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQAD 1024

Query: 1029 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1088
            QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY
Sbjct: 1025 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1084

Query: 1089 KLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1148
            KLDVVSAGKNFTQIRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW+
Sbjct: 1085 KLDVVSAGKNFTQIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWI 1144

Query: 1149 IYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPN 1208
            IYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTKMSKRKRQERIEPLYDRYHEPN
Sbjct: 1145 IYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPN 1190

Query: 1209 SWRLSKRRA 1218
            SWRLSKRRA
Sbjct: 1205 SWRLSKRRA 1190

[Close]

BLAST of Carg17571 vs. TrEMBL
Match: tr|F6HMT1|F6HMT1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0056g00470 PE=4 SV=1)

HSP 1 Score: 1876.7 bits (4860), Expect = 0.0e+00
Identity = 1070/1210 (88.43%), Postives = 1118/1210 (92.40%), Query Frame = 0


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGAEMP 68
            +DGLKKLEYLSLVSKVC+ELETHLG GDKVLAEFIT+MGR CETVDEFD+KLKENGAEMP
Sbjct: 7    NDGLKKLEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGAEMP 66

Query: 69   DYFVRSLLRIIHLILPPQ-KNNEKELKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 128
            DYFVR+LL IIH ILPP+ K+++K +K                                 
Sbjct: 67   DYFVRTLLTIIHAILPPKPKSDDKGMK--------------------------------- 126

Query: 129  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 127  --KDGGDGKKSKFPALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRGDRDKH 248
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + RGDRD+ 
Sbjct: 187  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDRRGDRDR- 246

Query: 249  TQNGRHHPIDQEPELYKVYKGRVSRVMDTGCFVQLSDFRGKEGLVHVSQIATRRISNAKD 308
             +NGR+H    EPELY VYKGRVSRVMDTGCFVQL+D +GKEGLVHVSQIATRR+ NAKD
Sbjct: 247  -RNGRYH--SDEPELYNVYKGRVSRVMDTGCFVQLNDLKGKEGLVHVSQIATRRVGNAKD 306

Query: 309  VVKRDQEVYVKVISFSGQKLSLSMRDVDQHSGKDLLPLKRKDADDGPRMNPSDSKDDGPV 368
            VVKRDQEVYVKVIS SGQKLSLSMRDVDQ++G+DL+PLK+   DD  R NPS + + GPV
Sbjct: 307  VVKRDQEVYVKVISVSGQKLSLSMRDVDQNTGRDLIPLKKSLEDDALRTNPSGA-NQGPV 366

Query: 369  VRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMASGVLSVSEYPSYDDEGDGLLY 428
             RTGLSGI+IVE++   PSRRPLKRMSSPE+WEAKQL+ASGVL + E+P YDDEGDG+LY
Sbjct: 367  SRTGLSGIRIVEENDAAPSRRPLKRMSSPEKWEAKQLIASGVLDIREFPMYDDEGDGMLY 426

Query: 429  QEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERR 488
            QEEG AEEELEIE+NEDEP FLQGQSRYS+DMSPVKIFKNPEGSLSRAAALQSALIKERR
Sbjct: 427  QEEG-AEEELEIEMNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLSRAAALQSALIKERR 486

Query: 489  EVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDI 548
            EVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK +
Sbjct: 487  EVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKAL 546

Query: 549  SFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 608
            +FGQ+SKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT
Sbjct: 547  TFGQRSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 606

Query: 609  TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 668
            T GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR
Sbjct: 607  TRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 666

Query: 669  EILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSGY 728
            EILIDDNLSQYSVIMLDEAHERTI TDVLFGLLK LVKRRPDLRLIVTSATLDAEKFSGY
Sbjct: 667  EILIDDNLSQYSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGY 726

Query: 729  FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDF 788
            FFNCNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGD+LLFLTGQEEID 
Sbjct: 727  FFNCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDH 786

Query: 789  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 848
            ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLTI
Sbjct: 787  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTI 846

Query: 849  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 908
            DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY
Sbjct: 847  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 906

Query: 909  RNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 968
            RNEMSPTS+PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD
Sbjct: 907  RNEMSPTSVPEIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 966

Query: 969  EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQA 1028
            EEGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQA
Sbjct: 967  EEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQA 1026

Query: 1029 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDK 1088
            DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLL+IMDK
Sbjct: 1027 DQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDK 1086

Query: 1089 YKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1148
            YKLDVVSAGKNFT+IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW
Sbjct: 1087 YKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDW 1146

Query: 1149 VIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEP 1208
            VIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKVADPTKMSKRKRQERIEPLYDRYHEP
Sbjct: 1147 VIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEP 1175

Query: 1209 NSWRLSKRRA 1218
            NSWRLSKRRA
Sbjct: 1207 NSWRLSKRRA 1175

The following BLAST results are available for this feature:

BLAST of Carg17571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937860.1	0.0e+00	98.86	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita mo...	[more]
XP_023537932.1	0.0e+00	98.22	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pe...	[more]
XP_022965541.1	0.0e+00	98.05	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita ma...	[more]
XP_023521965.1	0.0e+00	94.53	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pe...	[more]
XP_022946177.1	0.0e+00	93.69	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita mo...	[more]

BLAST of Carg17571 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26560.1	0.0e+00	84.59	ATP-dependent RNA helicase, putative	[more]
AT1G32490.1	8.0e-225	56.95	RNA helicase family protein	[more]
AT2G35340.1	1.0e-219	56.11	helicase domain-containing protein	[more]
AT5G13010.1	4.7e-217	48.43	RNA helicase family protein	[more]
AT3G62310.1	3.6e-201	52.63	RNA helicase family protein	[more]

BLAST of Carg17571 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38953\|DEAH5_ARATH	0.0e+00	84.59	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
sp\|Q14562\|DHX8_HUMAN	0.0e+00	63.27	ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1	[more]
sp\|A2A4P0\|DHX8_MOUSE	0.0e+00	63.67	ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1	[more]
sp\|Q54F05\|DHX8_DICDI	0.0e+00	67.22	ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=...	[more]
sp\|A1Z9L3\|DHX8_DROME	0.0e+00	61.90	ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 S...	[more]

BLAST of Carg17571 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2I4\|A0A1S3C2I4_CUCME	0.0e+00	95.44	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me...	[more]
tr\|A0A0A0LG89\|A0A0A0LG89_CUCSA	0.0e+00	96.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1	[more]
tr\|A0A2P6SGE4\|A0A2P6SGE4_ROSCH	0.0e+00	89.00	Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0351781 PE=4 S...	[more]
tr\|A0A2P6QSS4\|A0A2P6QSS4_ROSCH	0.0e+00	86.68	Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400041 PE=4 S...	[more]
tr\|F6HMT1\|F6HMT1_VITVI	0.0e+00	88.43	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_08s0056g00470 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding
GO:0004386	helicase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR012340	NA-bd_OB-fold
IPR002464	DNA/RNA_helicase_DEAH_CS
IPR011545	DEAD/DEAH_box_helicase_dom
IPR011709	DUF1605
IPR003029	S1_domain
IPR001650	Helicase_C
IPR014001	Helicase_ATP-bd
IPR007502	Helicase-assoc_dom
IPR022967	S1_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg17571-RA	Carg17571-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 475..495
None	No IPR available	COILS	Coil	Coil	coord: 111..138
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 740..914 e-value: 1.3E-71 score: 241.9
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 536..739 e-value: 6.1E-90 score: 302.4
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 257..343 e-value: 5.4E-26 score: 92.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 333..359
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 231..1216
None	No IPR available	PANTHER	PTHR18934:SF120	SUBFAMILY NOT NAMED	coord: 231..1216
None	No IPR available	CDD	cd00046	DEXDc	coord: 581..719 e-value: 1.03136E-32 score: 124.757
None	No IPR available	CDD	cd05684	S1_DHX8_helicase	coord: 263..339 e-value: 5.32224E-35 score: 128.896
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 261..332 e-value: 1.2E-17 score: 74.6
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 955..1045 e-value: 2.1E-41 score: 153.5
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 956..1044 e-value: 1.9E-25 score: 89.1
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 562..746 e-value: 5.8E-35 score: 132.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 574..737 score: 20.638
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 790..894 e-value: 1.2E-18 score: 78.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 762..894 e-value: 7.7E-13 score: 48.7
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 755..935 score: 17.246
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 744..901 e-value: 9.90264E-15 score: 71.8852
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 264..329 e-value: 3.2E-12 score: 46.5
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 263..332 score: 16.804
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 1102..1178 e-value: 4.7E-25 score: 87.7
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 570..720 e-value: 1.9E-7 score: 30.9
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 679..688
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 258..336
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 554..1088

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg17571	Cla019839	Watermelon (97103) v1	carwmB0714
Carg17571	Csa2G013240	Cucumber (Chinese Long) v2	carcuB0735
Carg17571	MELO3C004343	Melon (DHL92) v3.5.1	carmeB0711
Carg17571	ClCG02G016270	Watermelon (Charleston Gray)	carwcgB0692
Carg17571	CSPI02G03330	Wild cucumber (PI 183967)	carcpiB0751
Carg17571	Cucsa.133580	Cucumber (Gy14) v1	carcgyB0804
Carg17571	CmaCh05G011730	Cucurbita maxima (Rimu)	carcmaB1001
Carg17571	CmaCh12G010970	Cucurbita maxima (Rimu)	carcmaB1000
Carg17571	CmoCh05G011980	Cucurbita moschata (Rifu)	carcmoB0974
Carg17571	CmoCh12G011140	Cucurbita moschata (Rifu)	carcmoB0973
Carg17571	Lsi11G004800	Bottle gourd (USVL1VR-Ls)	carlsiB654
Carg17571	Cp4.1LG11g09650	Cucurbita pepo (Zucchini)	carcpeB1005
Carg17571	Cp4.1LG07g09280	Cucurbita pepo (Zucchini)	carcpeB1006
Carg17571	CsGy2G003430	Cucumber (Gy14) v2	carcgybB0713
Carg17571	MELO3C004343.2	Melon (DHL92) v3.6.1	carmedB0724
Carg17571	CsaV3_2G004480	Cucumber (Chinese Long) v3	carcucB0754
Carg17571	Cla97C02G042110	Watermelon (97103) v2	carwmbB0746
Carg17571	Bhi06G001485	Wax gourd	carwgoB0841

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg17571	Carg23424	Silver-seed gourd	carcarB325

The following block(s) are covering this gene:


Gene	Organism	Block
Carg17571	Silver-seed gourd	carcarB587