Carg23424 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23424
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ATP-dependent RNA helicase, putative
Location	Cucurbita_argyrosperma_scaffold_335 : 69628 .. 74483 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTTCCGCGGCTAACGGCGACGATGGATTGAAGAAGCTCGAGTACTTGTCCCTCGTTTCCAAGGTATGTTCTGAGCTCGAAACTCATTTAGGGTTCGGAGATAAAGTACTTGCTGAGTTCATAACCGAGATGGGGCGGAGATGTGAGACGGTGGACGAGTTCGATTCCAAATTGAAGGAGAACGGTGCTGAAATGCCCGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGGATGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGAAAAAAGGGCAAGTTTAGGGCCTTGGCGATCGGGGATGATAAGGAGAGAGCTAAGGAGCTCGTGAAGGAAATTGAGTTGGAGGCTCACCAGAAGCGTGGGGACAGAGACGTACAAGATGATCGATACAAGGGGAGGGCAGGGGACCGAGGAAGAGACAGAGACAGAGACAGGGATAGGGATAGGGATCGAGATGGTGACAGAAATAGAGATAGAGATAGAGATAGGTACAGGGATCGAGATAAGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGTGGTGATGATTATCAGAGAAGTGGAAGGCCAAGGGATCGGAATAGGAGAAATGGGTATGAAGAAAATGAAGGTTACACAGGGGATACAAGAGATGGTAATGGCAATCGGAGAGATGATAGGGACAAGCATACACAAAATGGGCGACACCTCCCTGTCGATCACGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCTAGAGTGATGGACACGGGTTGCTTTGTCCAGATAAATGATTTCAGAGGCAAGGAGGGTCTGGTTCACGTTTCTCAGATGGCTACTCGAAGGATTACCAATGCCAAGGATGTTGTAAAGCGAGATCAAGAGGTTTATGTCAAGGTTATTTCAGTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTGGACCAACATTCTGGAAAGGATTTGCTTCCGCTTAAGAAAAAGGATGCCGATGATGGTCCTAGAATGAATCCTTCAAATACGAAGGATGATGGCCCAGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTATTCCTTCACGCAGACCTTTGAAGAGAATGAGCTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCTTCTGGTGTTTTAAGTGTAAACGACTATCCTTCATATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAGGAGCTTGAGATTGAGTTGAATGAAGACGAGCCTGAATTTCTGCAAGGCCAGAGTAGATACTCAATTGACATGTCGCCAGTTAAAATATTCAAAAATCCGGAAGGGTCTCTGAGCCGGGCAGCTGCACTTCAATCTGCACTGATTAAGGAGCGTAGGGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTTGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACAGGTGAGAGGCATCTTGCACAGGAGCTCAGGGGCGTTGGCTTGTCGGCCTATGATATGCCTGAGTGGAAGAAGGATGCTTATGGAAAAGATATTAGTTTCGGGCAGAAATCGAAGCTCTCTATCCAGGAACAGAGGCAAAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAGGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAGGTAACTCAGTATCTTGCTGAAGCTGGATACACAACCTCCGGTAAAATTGGGTGCACTCAACCACGTAGGGTGGCTGCAATGTCTGTCGCGAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGGTATGCAATTCGTTTTGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCACAGTACTCGGTAGTTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGATTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGACTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGCGAACTTTCCCTGTGGAGATCCTCTATACTAAGCAGCCAGAAACTGATTATCTTGATGCTGCTTTAATCACAGTCTTGCAGATCCACTTGACAGAGCCTGAAGGTGACATACTTCTTTTCTTGACTGGCCAGGAGGAGATTGATTTTGCATGTCAGTCTCTATACGAGAGAATGAAAGGACTCGGTAAAAATGTTCCCGAGTTAATAATTCTACCAGTCTACAGTGCCTTGCCCAGTGAAATGCAGTCCAGGATTTTTGAACCAGCTCCTCCTGGTAAGAGGAAAGTTGTAGTGGCGACTAACATTGCTGAGGCTTCATTGACAATAGATGGAATCTTTTATGTTATTGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATCACACCAATTTCACAAGCATCAGCCAAACAACGTGCGGGGCGTGCTGGGCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAACGAGATGTCTCCTACAACAATACCAGAAATCCAGAGAATCAATCTTGGTCATACTACTCTTACTATGAAAGCCATGGGGATAAATGATCTCCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCACTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTGGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAATTTCCTTTAGATCCACCTTTGTCTAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAGTTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCTTGGTGTTTTGAAAACTTTGTTCAATCTCGATCCTTGAGGAGAGCACAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTATGATCTTCTAGTCTCCTCTTGATATTGTTTTTGTTAAATTTTTGTCTTCAGCTACGATTATCTATTGTTGTCTTGTCTTGCATGCACGCATTTGCTTTATAGTTTACATGTACAGCGTAGAGATGGTTGCTCTAGGGTGGATAAGGTGCTTTTGAGCTCTTCCTTGTGGCACACTGGTTTCTCTACTGTTTTTAAGGATATTTGGCTTAGGTGGAATAAGGATTATGGGCCAAGTCTTATTTATTGGATAGGAGTCATTTTCATTTGTGTAGGTTTGGACCCCCTTTAGTTGGGCTTGTACATTCTTTAGGGGAAAAAAACAGTTGGTTGACATGTAGGAATGGAATCTAGTACAAATATATTTTGTCTGAACAGAATCAGGCTGAACTTGCAGACTTCTTATCCTGGGTGAGGAAACTTAGGCATCTTCTTGTTAAAGAATTTGGAAAGCGTGGCTGAATGAACTTTGGTGAGATGCACAATTATGTTTGTATGTAGAAAGTTGAGTTCAAATGTTTGTATGTCATTGGGCTTGTTCATTGGGCTTGTGTGAGATCTCACGAAGAAGGAAACCGTCTTTGTAAGGGTGTAGAAACCTCTCCTAGTAGACACATTTTAAAAACCTTGAGAAGCTCGGAAGGCAAAGCTCAAAGAGAACAATATCTGCTAGCGTAGACTTAGGCGGTCACAGTTTGTGAAAGCAACTTCTAAGATTCTTCGCTGCATTTTGTATATAGAAACGCTGGTAGAGAGAAATTCTGTTTATCGGATTCTGGGGAGTTTTAGCTGGTGTTATCTACTATTCTTTTATCAGTTTTTGCTTTATCCATCGTCATTCAACTATTGTCTCTTGGATGTTAGCATCTTAAATGTTCCTATCAGACTCCTTGCTTTCTAGCTCACACACGTTTGCCCAATTTCAGGTACAAACTGGATGTGGTGAGTGCAGGCAAGAATTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCACGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGAACGCTAGTCGAGAACCAACCGGTTTATATCCATCCAAGCAGCGCTTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTAGTCATGACAACAAAAGAGTACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAACTAGCTCCAAGATACTTCAAAGTTGCAGACCCAACAAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTACGACAGGTATCACGAACCCAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATCCATGTCGTTTCTTTCTGTCCCATATTTGGCTGACTGTGTAGGTTTATAGGCTTTTGCCATAAATGTATATATCCCTGTTGCAGTATAATCTCTGGAGGGTTAGACCTTTGCAATTTATATATGTGAAAAGTTTTGTCTTCCCATGAATGTTGTTGGGAGGGGAAACCCCAAGAAAATCTTTGATCAGAGCCATTTTTATTTTCTCGGTTTAGATTTAGACTATTAATGGTTTTTTTTTTCTTTTTCTATGTTGTTTAGAATAGTTTCC

mRNA sequence

ATGGTTGCTTCCGCGGCTAACGGCGACGATGGATTGAAGAAGCTCGAGTACTTGTCCCTCGTTTCCAAGGTATGTTCTGAGCTCGAAACTCATTTAGGGTTCGGAGATAAAGTACTTGCTGAGTTCATAACCGAGATGGGGCGGAGATGTGAGACGGTGGACGAGTTCGATTCCAAATTGAAGGAGAACGGTGCTGAAATGCCCGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGGATGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGAAAAAAGGGCAAGTTTAGGGCCTTGGCGATCGGGGATGATAAGGAGAGAGCTAAGGAGCTCGTGAAGGAAATTGAGTTGGAGGCTCACCAGAAGCGTGGGGACAGAGACGTACAAGATGATCGATACAAGGGGAGGGCAGGGGACCGAGGAAGAGACAGAGACAGAGACAGGGATAGGGATAGGGATCGAGATGGTGACAGAAATAGAGATAGAGATAGAGATAGGTACAGGGATCGAGATAAGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGTGGTGATGATTATCAGAGAAGTGGAAGGCCAAGGGATCGGAATAGGAGAAATGGGTATGAAGAAAATGAAGGTTACACAGGGGATACAAGAGATGGTAATGGCAATCGGAGAGATGATAGGGACAAGCATACACAAAATGGGCGACACCTCCCTGTCGATCACGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCTAGAGTGATGGACACGGGTTGCTTTGTCCAGATAAATGATTTCAGAGGCAAGGAGGGTCTGGTTCACGTTTCTCAGATGGCTACTCGAAGGATTACCAATGCCAAGGATGTTGTAAAGCGAGATCAAGAGGTTTATGTCAAGGTTATTTCAGTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTGGACCAACATTCTGGAAAGGATTTGCTTCCGCTTAAGAAAAAGGATGCCGATGATGGTCCTAGAATGAATCCTTCAAATACGAAGGATGATGGCCCAGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTATTCCTTCACGCAGACCTTTGAAGAGAATGAGCTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCTTCTGGTGTTTTAAGTGTAAACGACTATCCTTCATATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAGGAGCTTGAGATTGAGTTGAATGAAGACGAGCCTGAATTTCTGCAAGGCCAGAGTAGATACTCAATTGACATGTCGCCAGTTAAAATATTCAAAAATCCGGAAGGGTCTCTGAGCCGGGCAGCTGCACTTCAATCTGCACTGATTAAGGAGCGTAGGGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTTGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACAGGTGAGAGGCATCTTGCACAGGAGCTCAGGGGCGTTGGCTTGTCGGCCTATGATATGCCTGAGTGGAAGAAGGATGCTTATGGAAAAGATATTAGTTTCGGGCAGAAATCGAAGCTCTCTATCCAGGAACAGAGGCAAAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAGGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAGGTAACTCAGTATCTTGCTGAAGCTGGATACACAACCTCCGGTAAAATTGGGTGCACTCAACCACGTAGGGTGGCTGCAATGTCTGTCGCGAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGGTATGCAATTCGTTTTGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCACAGTACTCGGTAGTTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGATTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGACTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGCGAACTTTCCCTGTGGAGATCCTCTATACTAAGCAGCCAGAAACTGATTATCTTGATGCTGCTTTAATCACAGTCTTGCAGATCCACTTGACAGAGCCTGAAGGTGACATACTTCTTTTCTTGACTGGCCAGGAGGAGATTGATTTTGCATGTCAGTCTCTATACGAGAGAATGAAAGGACTCGGTAAAAATGTTCCCGAGTTAATAATTCTACCAGTCTACAGTGCCTTGCCCAGTGAAATGCAGTCCAGGATTTTTGAACCAGCTCCTCCTGGTAAGAGGAAAGTTGTAGTGGCGACTAACATTGCTGAGGCTTCATTGACAATAGATGGAATCTTTTATGTTATTGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATCACACCAATTTCACAAGCATCAGCCAAACAACGTGCGGGGCGTGCTGGGCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAACGAGATGTCTCCTACAACAATACCAGAAATCCAGAGAATCAATCTTGGTCATACTACTCTTACTATGAAAGCCATGGGGATAAATGATCTCCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCACTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTGGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAATTTCCTTTAGATCCACCTTTGTCTAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAGTTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCTTGGTGTTTTGAAAACTTTGTTCAATCTCGATCCTTGAGGAGAGCACAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTACAAACTGGATGTGGTGAGTGCAGGCAAGAATTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCACGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGAACGCTAGTCGAGAACCAACCGGTTTATATCCATCCAAGCAGCGCTTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTAGTCATGACAACAAAAGAGTACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAACTAGCTCCAAGATACTTCAAAGTTGCAGACCCAACAAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTACGACAGGTATCACGAACCCAACTCTTGGCGATTGAGTAAGAGACGAGCTTAATCCATGTCGTTTCTTTCTGTCCCATATTTGGCTGACTGTGTAGGTTTATAGGCTTTTGCCATAAATGTATATATCCCTGTTGCAGTATAATCTCTGGAGGGTTAGACCTTTGCAATTTATATATGTGAAAAGTTTTGTCTTCCCATGAATGTTGTTGGGAGGGGAAACCCCAAGAAAATCTTTGATCAGAGCCATTTTTATTTTCTCGGTTTAGATTTAGACTATTAATGGTTTTTTTTTTCTTTTTCTATGTTGTTTAGAATAGTTTCC

Coding sequence (CDS)

ATGGTTGCTTCCGCGGCTAACGGCGACGATGGATTGAAGAAGCTCGAGTACTTGTCCCTCGTTTCCAAGGTATGTTCTGAGCTCGAAACTCATTTAGGGTTCGGAGATAAAGTACTTGCTGAGTTCATAACCGAGATGGGGCGGAGATGTGAGACGGTGGACGAGTTCGATTCCAAATTGAAGGAGAACGGTGCTGAAATGCCCGATTACTTTGTTCGCTCGCTTCTGAGGATCATTCACCTTATTCTTCCTCCGCAGAAGGATGACAATGAGAAGGAGTTCAAGAAGGAGAAGGAATCAGATGGAAAAAAGGGCAAGTTTAGGGCCTTGGCGATCGGGGATGATAAGGAGAGAGCTAAGGAGCTCGTGAAGGAAATTGAGTTGGAGGCTCACCAGAAGCGTGGGGACAGAGACGTACAAGATGATCGATACAAGGGGAGGGCAGGGGACCGAGGAAGAGACAGAGACAGAGACAGGGATAGGGATAGGGATCGAGATGGTGACAGAAATAGAGATAGAGATAGAGATAGGTACAGGGATCGAGATAAGGATAGAGATAGGCGCAGGGATAGATATGAAAGGGATGAGAGACATGGTGGTAGGGATCGTGATGATGATGGTGGTGATGATTATCAGAGAAGTGGAAGGCCAAGGGATCGGAATAGGAGAAATGGGTATGAAGAAAATGAAGGTTACACAGGGGATACAAGAGATGGTAATGGCAATCGGAGAGATGATAGGGACAAGCATACACAAAATGGGCGACACCTCCCTGTCGATCACGAACCTGAATTGTACAAGGTCTACAAGGGTAGAGTTTCTAGAGTGATGGACACGGGTTGCTTTGTCCAGATAAATGATTTCAGAGGCAAGGAGGGTCTGGTTCACGTTTCTCAGATGGCTACTCGAAGGATTACCAATGCCAAGGATGTTGTAAAGCGAGATCAAGAGGTTTATGTCAAGGTTATTTCAGTTTCAGGGCAAAAGTTGAGCCTTTCTATGAGGGATGTGGACCAACATTCTGGAAAGGATTTGCTTCCGCTTAAGAAAAAGGATGCCGATGATGGTCCTAGAATGAATCCTTCAAATACGAAGGATGATGGCCCAGTGGTTAGGACTGGCCTTTCTGGAATTAAGATTGTGGAAGATGATGTTACTATTCCTTCACGCAGACCTTTGAAGAGAATGAGCTCACCTGAGAGATGGGAAGCCAAACAACTGATTGCTTCTGGTGTTTTAAGTGTAAACGACTATCCTTCATATGATGATGAGGGAGATGGGCTATTATATCAAGAAGAGGGTGCTGAAGAGGAGCTTGAGATTGAGTTGAATGAAGACGAGCCTGAATTTCTGCAAGGCCAGAGTAGATACTCAATTGACATGTCGCCAGTTAAAATATTCAAAAATCCGGAAGGGTCTCTGAGCCGGGCAGCTGCACTTCAATCTGCACTGATTAAGGAGCGTAGGGAAGTTCGTGAGCAGCAGCAAAGGACCATGCTTGATTCAATTCCAAAGGATCTTAATCGACCTTGGGAAGACCCTATGCCAGAGACAGGTGAGAGGCATCTTGCACAGGAGCTCAGGGGCGTTGGCTTGTCGGCCTATGATATGCCTGAGTGGAAGAAGGATGCTTATGGAAAAGATATTAGTTTCGGGCAGAAATCGAAGCTCTCTATCCAGGAACAGAGGCAAAGCTTACCCATTTACAAGCTGAAGAAAGAACTTATTCAGGCCGTTCATGATAATCAGGTACTTGTTGTCATTGGTGAGACTGGTTCAGGTAAGACAACCCAGGTAACTCAGTATCTTGCTGAAGCTGGATACACAACCTCCGGTAAAATTGGGTGCACTCAACCACGTAGGGTGGCTGCAATGTCTGTCGCGAAGAGGGTTGCTGAAGAGTTTGGATGTCGCTTAGGAGAGGAAGTTGGGTATGCAATTCGTTTTGAGGATTGTACTGGACCTGATACTGTGATCAAGTATATGACTGATGGTATGCTTCTTAGGGAGATTTTGATTGATGATAACTTGTCACAGTACTCGGTAGTTATGCTTGATGAAGCTCACGAGAGAACAATCTTCACTGATGTTCTTTTTGGATTGCTGAAGCAACTTGTGAAAAGGAGACCTGACCTTCGACTGATTGTCACATCTGCTACTTTAGATGCCGAAAAATTTTCAGGATATTTCTTTAATTGTAATATTTTTACAATTCCTGGGCGAACTTTCCCTGTGGAGATCCTCTATACTAAGCAGCCAGAAACTGATTATCTTGATGCTGCTTTAATCACAGTCTTGCAGATCCACTTGACAGAGCCTGAAGGTGACATACTTCTTTTCTTGACTGGCCAGGAGGAGATTGATTTTGCATGTCAGTCTCTATACGAGAGAATGAAAGGACTCGGTAAAAATGTTCCCGAGTTAATAATTCTACCAGTCTACAGTGCCTTGCCCAGTGAAATGCAGTCCAGGATTTTTGAACCAGCTCCTCCTGGTAAGAGGAAAGTTGTAGTGGCGACTAACATTGCTGAGGCTTCATTGACAATAGATGGAATCTTTTATGTTATTGATCCTGGGTTTGCTAAACAGAATGTATATAACCCAAAGCAAGGGCTTGATTCTCTTGTTATCACACCAATTTCACAAGCATCAGCCAAACAACGTGCGGGGCGTGCTGGGCGAACAGGACCTGGAAAATGTTACCGCCTCTATACTGAGAGTGCTTATCGCAACGAGATGTCTCCTACAACAATACCAGAAATCCAGAGAATCAATCTTGGTCATACTACTCTTACTATGAAAGCCATGGGGATAAATGATCTCCTGTCATTTGATTTTATGGATCCACCTTCACCCCAAGCACTAATTTCAGCAATGGAACAACTTTACAGTCTAGGAGCACTGGACGAAGAAGGACTTCTGACTAAGTTGGGTAGAAAAATGGCCGAATTTCCTTTAGATCCACCTTTGTCTAAGATGCTGCTAGCTAGTGTGGATCTTGGATGCAGTGATGAGATTTTGACCATAATTGCAATGATTCAGACTGGAAATATCTTTTACAGGCCAAGGGAAAAACAAGCCCAGGCTGATCAGAAAAGGGCCAAGTTTTTCCAGCCAGAGGGAGATCATCTGACTTTGCTTGCAGTTTATGAGGCGTGGAAAGCCAAAAACTTTTCAGGCCCTTGGTGTTTTGAAAACTTTGTTCAATCTCGATCCTTGAGGAGAGCACAGGATGTGAGGAAACAACTTCTTTCAATTATGGACAAGTACAAACTGGATGTGGTGAGTGCAGGCAAGAATTTCACACAGATAAGGAAGGCAATTACAGCAGGGTTCTTTTTCCACGCAGCCAGAAAGGATCCTCAAGAGGGTTATCGAACGCTAGTCGAGAACCAACCGGTTTATATCCATCCAAGCAGCGCTTTATTCCAAAGACAACCCGACTGGGTCATATACCACGAGCTAGTCATGACAACAAAAGAGTACATGCGTGAAGTGACAGTCATAGATCCCAAATGGCTTGTTGAACTAGCTCCAAGATACTTCAAAGTTGCAGACCCAACAAAGATGAGTAAGCGAAAGCGACAAGAGCGGATTGAACCACTCTACGACAGGTATCACGAACCCAACTCTTGGCGATTGAGTAAGAGACGAGCTTAA

Protein sequence

MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAKELVKEIELEAHQKRGDRDVQDDRYKGRAGDRGRDRDRDRDRDRDRDGDRNRDRDRDRYRDRDKDRDRRRDRYERDERHGGRDRDDDGGDDYQRSGRPRDRNRRNGYEENEGYTGDTRDGNGNRRDDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA

Homology

[Close]

BLAST of Carg23424 vs. NCBI nr
Match: XP_022946177.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita moschata])

HSP 1 Score: 2165.6 bits (5610), Expect = 0.0e+00
Identity = 1219/1219 (100.00%), Postives = 1219/1219 (100.00%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQM 300
            XXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQM
Sbjct: 241  XXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQM 300

Query: 301  ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN 360
            ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN
Sbjct: 301  ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN 360

Query: 361  PSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPS 420
            PSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPS
Sbjct: 361  PSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPS 420

Query: 421  YDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL 480
            YDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL
Sbjct: 421  YDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL 480

Query: 481  QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW 540
            QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW
Sbjct: 481  QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW 540

Query: 541  KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVT 600
            KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVT
Sbjct: 541  KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVT 600

Query: 601  QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 660
            QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK
Sbjct: 601  QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 660

Query: 661  YMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT 720
            YMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT
Sbjct: 661  YMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT 720

Query: 721  LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLF 780
            LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLF
Sbjct: 721  LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLF 780

Query: 781  LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT 840
            LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT
Sbjct: 781  LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT 840

Query: 841  NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC 900
            NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC
Sbjct: 841  NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC 900

Query: 901  YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME 960
            YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME
Sbjct: 901  YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME 960

Query: 961  QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 1020
            QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY
Sbjct: 961  QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 1020

Query: 1021 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1080
            RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR
Sbjct: 1021 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1080

Query: 1081 KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1140
            KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS
Sbjct: 1081 KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1140

Query: 1141 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIE 1200
            ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIE
Sbjct: 1141 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIE 1200

Query: 1201 PLYDRYHEPNSWRLSKRRA 1220
            PLYDRYHEPNSWRLSKRRA
Sbjct: 1201 PLYDRYHEPNSWRLSKRRA 1219

[Close]

BLAST of Carg23424 vs. NCBI nr
Match: XP_022999145.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita maxima])

HSP 1 Score: 2152.5 bits (5576), Expect = 0.0e+00
Identity = 1214/1231 (98.62%), Postives = 1215/1231 (98.70%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVAS ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL
Sbjct: 1    MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  ELVKEIELEAHQKRGDRDVQ------------XXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            ELVKEIELEAHQKRGDRDVQ            XXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  ELVKEIELEAHQKRGDRDVQDDRYKGRAGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDF 300
            XXXXXXXXXXXXXXXXXX DKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDF
Sbjct: 241  XXXXXXXXXXXXXXXXXXXDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDF 300

Query: 301  RGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360
            RGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL
Sbjct: 301  RGKEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL 360

Query: 361  KKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLI 420
            KKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLI
Sbjct: 361  KKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLI 420

Query: 421  ASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK 480
            ASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK
Sbjct: 421  ASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK 480

Query: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540
            NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR
Sbjct: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540

Query: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
            GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI
Sbjct: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600

Query: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
            GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660

Query: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKR 720
            FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKR
Sbjct: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKR 720

Query: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
            RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780

Query: 781  HLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
            HLTEPEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840

Query: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
            APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900

Query: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
            AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960

Query: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
            PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020

Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
            IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080

Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
            QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140

Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT 1200
            VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT 1200

Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1220
            KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1231

[Close]

BLAST of Carg23424 vs. NCBI nr
Match: XP_023521965.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo] >XP_023546823.1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2139.0 bits (5541), Expect = 0.0e+00
Identity = 1207/1223 (98.69%), Postives = 1210/1223 (98.94%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL
Sbjct: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120

Query: 121  ELVKEIELEAHQKRGDR----DVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            ELVK     AHQKRGDR       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  ELVKXXXXXAHQKRGDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH 300
            XXXXXXXXX RDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH
Sbjct: 241  XXXXXXXXXDRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH 300

Query: 301  VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360
            VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG
Sbjct: 301  VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360

Query: 361  PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN 420
            PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN
Sbjct: 361  PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN 420

Query: 421  DYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR 480
            DYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR
Sbjct: 421  DYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR 480

Query: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540
            AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540

Query: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 600
            MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT
Sbjct: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 600

Query: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660
            TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD
Sbjct: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660

Query: 661  TVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720
            TVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV
Sbjct: 661  TVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720

Query: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780
            TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD
Sbjct: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780

Query: 781  ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840
            +LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV
Sbjct: 781  VLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840

Query: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900
            VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG
Sbjct: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900

Query: 901  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960
            PGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI
Sbjct: 901  PGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960

Query: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020
            SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG
Sbjct: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020

Query: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080
            NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA
Sbjct: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080

Query: 1081 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140
            QDVRKQLLSIMDKYKLDVVSAG+NFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI
Sbjct: 1081 QDVRKQLLSIMDKYKLDVVSAGRNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140

Query: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQ 1200
            HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQ
Sbjct: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQ 1200

Query: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1220
            ERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Carg23424 vs. NCBI nr
Match: XP_008455589.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucumis melo])

HSP 1 Score: 2061.2 bits (5339), Expect = 0.0e+00
Identity = 1167/1223 (95.42%), Postives = 1184/1223 (96.81%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVAS ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK D+EKE KKEKESDGKKGKFRALAIGDD+ERA 
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAX 120

Query: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXRD----KHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH 300
            XXXXXX      +  +NGRH PV HEPELY VYKGRVSRVMDTGCFVQ+NDFRGKEGLVH
Sbjct: 241  XXXXXXXGNGNWRGDRNGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVH 300

Query: 301  VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360
            VSQ+ATRRI+NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG
Sbjct: 301  VSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360

Query: 361  PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN 420
            PRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLSV+
Sbjct: 361  PRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVS 420

Query: 421  DYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR 480
            +YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSLSR
Sbjct: 421  EYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSR 480

Query: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540
            AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540

Query: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 600
            MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKT
Sbjct: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 600

Query: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660
            TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD
Sbjct: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660

Query: 661  TVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720
            TVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV
Sbjct: 661  TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720

Query: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780
            TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD
Sbjct: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780

Query: 781  ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840
            +LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV
Sbjct: 781  VLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840

Query: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900
            VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG
Sbjct: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900

Query: 901  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960
            PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI
Sbjct: 901  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960

Query: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020
            SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG
Sbjct: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020

Query: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080
            NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA
Sbjct: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080

Query: 1081 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140
            QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI
Sbjct: 1081 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140

Query: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQ 1200
            HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQ
Sbjct: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQ 1200

Query: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1220
            ERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Carg23424 vs. NCBI nr
Match: XP_022965541.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita maxima])

HSP 1 Score: 2027.3 bits (5251), Expect = 0.0e+00
Identity = 1156/1231 (93.91%), Postives = 1173/1231 (95.29%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVAS ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD KL
Sbjct: 1    MVASTANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDVKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALA--------- 120
            KENGAEMPDYFVRSLLRIIHLILPPQK +NEKE KK+KESDGKK KFRAL          
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQK-NNEKELKKDKESDGKKSKFRALVXXXXXXXXX 120

Query: 121  -IGDDKERAKELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXXXXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRG 300
            XXXXXXXXXXX     RDKHTQNGRH PVD EPELYKVYKGRVSRVMDTGCFVQ++DFRG
Sbjct: 241  XXXXXXXXXXXNWRGDRDKHTQNGRHHPVDQEPELYKVYKGRVSRVMDTGCFVQLSDFRG 300

Query: 301  KEGLVHVSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPL-K 360
            KEGLVHVSQ+ATRRI+NAKD+VKRDQEVYVKVI  SGQKLSLSMRDVDQHSGKDLLPL K
Sbjct: 301  KEGLVHVSQIATRRISNAKDIVKRDQEVYVKVILFSGQKLSLSMRDVDQHSGKDLLPLTK 360

Query: 361  KKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIA 420
            KKDADDGPRMNPS++KDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQL+A
Sbjct: 361  KKDADDGPRMNPSDSKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLMA 420

Query: 421  SGVLSVNDYPSYDDEGDGLLYQEEG-AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK 480
            SGVLSV++YPSYDDEGDGLLY EEG AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK
Sbjct: 421  SGVLSVSEYPSYDDEGDGLLYLEEGAAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFK 480

Query: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540
            NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR
Sbjct: 481  NPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELR 540

Query: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600
            GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI
Sbjct: 541  GVGLSAYDMPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVI 600

Query: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660
            GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR
Sbjct: 601  GETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIR 660

Query: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKR 720
            FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLK+LVKR
Sbjct: 661  FEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKKLVKR 720

Query: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780
            RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI
Sbjct: 721  RPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQI 780

Query: 781  HLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840
            HLTEPEGD+LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP
Sbjct: 781  HLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEP 840

Query: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900
            APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR
Sbjct: 841  APPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQR 900

Query: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960
            AGRAGRTGPGKCYRLYTESAYRNEMSPT+IPEIQRINLGHTTLTMKAMGINDLLSFDFMD
Sbjct: 901  AGRAGRTGPGKCYRLYTESAYRNEMSPTSIPEIQRINLGHTTLTMKAMGINDLLSFDFMD 960

Query: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020
            PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT
Sbjct: 961  PPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT 1020

Query: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080
            IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV
Sbjct: 1021 IIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFV 1080

Query: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140
            QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL
Sbjct: 1081 QSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTL 1140

Query: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT 1200
            VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT
Sbjct: 1141 VENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPT 1200

Query: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1220
            KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 KMSKRKRQERIEPLYDRYHEPNSWRLSKRRA 1230

[Close]

BLAST of Carg23424 vs. TAIR10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative)

HSP 1 Score: 1807.3 bits (4680), Expect = 0.0e+00
Identity = 1031/1209 (85.28%), Postives = 1092/1209 (90.32%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAKELVKEIELEAH 131
            VRSLL  IH I PP+     K  KK++E D +  KF+ LAI D K++             
Sbjct: 66   VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDK------------- 125

Query: 132  QKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126  -------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKHT 251
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DK  
Sbjct: 186  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYVEEDKGG 245

Query: 252  QNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQMATRRITNAKDV 311
             N        EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQMATRR+  AK+ 
Sbjct: 246  AN--------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEF 305

Query: 312  VKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK-KDADDGPRMNPSNTKDDGPV 371
            VKRD EVYVKVIS+S  K SLSMRDVDQ++G+DL+PL+K  D DD  R NPS    DG V
Sbjct: 306  VKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQV 365

Query: 372  VRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGLLY 431
             +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQLIASGVL V+++P YD++GDG+LY
Sbjct: 366  TKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLY 425

Query: 432  QEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERRE 491
            QEEGAEEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL KERRE
Sbjct: 426  QEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERRE 485

Query: 492  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDIS 551
            +REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK  +
Sbjct: 486  MREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPT 545

Query: 552  FGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 611
            FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT
Sbjct: 546  FGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 605

Query: 612  SGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 671
             GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE
Sbjct: 606  KGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 665

Query: 672  ILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 731
            ILID+NLSQYSV+MLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKFSGYF
Sbjct: 666  ILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 725

Query: 732  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFA 791
            FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDIL+FLTGQEEID A
Sbjct: 726  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSA 785

Query: 792  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTID 851
            CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEASLTID
Sbjct: 786  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTID 845

Query: 852  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 911
            GI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR
Sbjct: 846  GIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 905

Query: 912  NEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 971
            NEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDE
Sbjct: 906  NEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDE 965

Query: 972  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1031
            EGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQAD
Sbjct: 966  EGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQAD 1025

Query: 1032 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1091
            QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSIMDKY
Sbjct: 1026 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKY 1085

Query: 1092 KLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1151
            KLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV
Sbjct: 1086 KLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1145

Query: 1152 IYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPN 1211
            IYH+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQERIEPLYDRYHEPN
Sbjct: 1146 IYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPN 1168

Query: 1212 SWRLSKRRA 1220
            SWRLSKRRA
Sbjct: 1206 SWRLSKRRA 1168

[Close]

BLAST of Carg23424 vs. TAIR10
Match: AT1G32490.1 (RNA helicase family protein)

HSP 1 Score: 780.8 bits (2015), Expect = 1.2e-225
Identity = 376/655 (57.40%), Postives = 498/655 (76.03%), Query Frame = 0


Query: 543  DAYGKDISFGQKSKL-SIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQ 602
            DA  K     +K+ L  +QE R+SLPIY  + +L++AV ++QVLV++G+TGSGKTTQ+ Q
Sbjct: 380  DAKQKSQDLAEKTALEELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQ 439

Query: 603  YLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKY 662
            YL EAGYT  GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   TV+KY
Sbjct: 440  YLHEAGYTKRGKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKY 499

Query: 663  MTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATL 722
            MTDGMLLRE+L + +L+ YSVV++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+
Sbjct: 500  MTDGMLLRELLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATM 559

Query: 723  DAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFL 782
            DAEKFS YF    IF+ PGR +PVEI YT  PE DY+DAA++T+L IH+ EP GDIL+F 
Sbjct: 560  DAEKFSDYFDTAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFF 619

Query: 783  TGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATN 842
            TGQEEI+ A + L  R++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATN
Sbjct: 620  TGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATN 679

Query: 843  IAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCY 902
            IAE SLTIDGI YV+DPGF+K   YNP+ G++SL+ITPIS+ASA QRAGRAGRT PGKCY
Sbjct: 680  IAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCY 739

Query: 903  RLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQ 962
            RLYT   Y N++   T+PE+QR NL    L +K++GI+DL++FDFMDPP  +AL+ ++E 
Sbjct: 740  RLYTAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLEL 799

Query: 963  LYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQT-GNIFY 1022
            L++LGAL++ G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+   G+IFY
Sbjct: 800  LFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFY 859

Query: 1023 RPREKQAQADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDV 1082
            RP++KQ  AD  R  F     GDH+ LL VY +WK  NFS  WC+EN++Q RS++RA+D+
Sbjct: 860  RPKDKQVHADNARMNFHTGNVGDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDI 919

Query: 1083 RKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPS 1142
            R QL  ++++ ++D+ S       +RK+I AGFF H A+      YRT+   Q V+IHP+
Sbjct: 920  RDQLEGLLERVEIDISSNLNELDSVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPN 979

Query: 1143 SALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1195
            S L Q  P WV+YHELV+T+KEYMR+VT + P+WL+ELAP Y+++ D    + +K
Sbjct: 980  SGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKK 1034

[Close]

BLAST of Carg23424 vs. TAIR10
Match: AT2G35340.1 (helicase domain-containing protein)

HSP 1 Score: 762.3 bits (1967), Expect = 4.5e-220
Identity = 362/647 (55.95%), Postives = 489/647 (75.58%), Query Frame = 0


Query: 550  SFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYT 609
            S G+ +   +QE R++LPIY  + +L+ AV D+QVL+++GETGSGKTTQ+ QYL EAGYT
Sbjct: 388  SAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDHQVLIIVGETGSGKTTQIPQYLHEAGYT 447

Query: 610  TSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLR 669
              GK+GCTQPRRVAAMSVA RVA+E G +LG EVGY+IRFEDCT   T++KYMTDGMLLR
Sbjct: 448  KLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHEVGYSIRFEDCTSEKTILKYMTDGMLLR 507

Query: 670  EILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGY 729
            E+L + +L  YSV+++DEAHERT+ TD+LFGL+K + + RPDL+L+++SAT+DAEKFS +
Sbjct: 508  ELLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDIARARPDLKLLISSATMDAEKFSDF 567

Query: 730  FFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDF 789
            F    IF  PGR +PV+I +T  PE DY+DAA+ TVL IH+ EP GD+L+FL GQEEI+ 
Sbjct: 568  FDQAPIFRFPGRRYPVDICFTTAPEADYMDAAITTVLTIHVKEPLGDVLVFLPGQEEIEA 627

Query: 790  ACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTI 849
              ++L  +++GLG  + ELII P+Y+ LPSE+Q++IFEP P G RKVV+ATNIAE SLTI
Sbjct: 628  VEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGARKVVLATNIAETSLTI 687

Query: 850  DGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAY 909
            DGI YV+DPGF+K   YNP+ G++SL++TPIS+ASA QR GRAGRT PGKCYRLYT   Y
Sbjct: 688  DGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNY 747

Query: 910  RNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALD 969
             N++   T+PEIQR NL    L++K++GI++LL+FDFMDPP  +ALI ++E L++LGAL+
Sbjct: 748  YNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLLNFDFMDPPPSEALIKSLELLFALGALN 807

Query: 970  EEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG-NIFYRPREKQAQ 1029
            + G LTK GR+MAEFPLDP LSKM++ S    CSDEI++I AM+  G +IFYRP++KQ  
Sbjct: 808  QLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVH 867

Query: 1030 ADQKRAKFFQPE-GDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIM 1089
            AD     F     GDH+  L +Y +WK  N+S  WC+EN++Q RS++RA+D+R QL  ++
Sbjct: 868  ADNAMKNFHVGNVGDHIAFLKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLL 927

Query: 1090 DKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQP 1149
            ++ ++DV S       IRK+I AGFF H A+      YRT+   Q V+IHP+S L Q  P
Sbjct: 928  ERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIHPASGLSQVLP 987

Query: 1150 DWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRK 1195
             WV+YH+LV+T+KEYMR+VT + P+WL+E+AP Y+++ D    + +K
Sbjct: 988  RWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPHYYQLKDVEDATSKK 1034

[Close]

BLAST of Carg23424 vs. TAIR10
Match: AT5G13010.1 (RNA helicase family protein)

HSP 1 Score: 750.4 bits (1936), Expect = 1.8e-216
Identity = 397/823 (48.24%), Postives = 558/823 (67.80%), Query Frame = 0


Query: 401  RWEAKQLIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSID 460
            +WE +QL+ SG +   +  +  D  +         E +  + +++ +P FL G+  Y+  
Sbjct: 399  QWEDRQLLRSGAVRGTEVQTEFDSEE---------ERKAILLVHDTKPPFLDGRVVYTKQ 458

Query: 461  MSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGE 520
              PV   K+P   ++  +   S L+K   E+RE+Q      S  K   R WE      G 
Sbjct: 459  AEPVMPVKDPTSDMAIISRKGSGLVK---EIREKQ------SANKSRQRFWELAGSNLG- 518

Query: 521  RHLAQELRGVGLSAYDMP------------EWKKDA-------YGKDISFGQKSKLSIQE 580
                  + G+  SA  +             ++K +A        G+ +S    SK ++ E
Sbjct: 519  -----NILGIEKSAEQIDADTAVVGDDGEVDFKGEAKFAQHMKKGEAVSEFAMSK-TMAE 578

Query: 581  QRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRR 640
            QRQ LPI+ ++ EL+Q + +NQV+VV+GETGSGKTTQ+TQYL E GYT +G +GCTQPRR
Sbjct: 579  QRQYLPIFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLHEDGYTINGIVGCTQPRR 638

Query: 641  VAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYS 700
            VAAMSVAKRV+EE    LG+++GYAIRFED TGP+TVIKYMTDG+LLRE L D +L +Y 
Sbjct: 639  VAAMSVAKRVSEEMETELGDKIGYAIRFEDVTGPNTVIKYMTDGVLLRETLKDSDLDKYR 698

Query: 701  VVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGR 760
            VV++DEAHER++ TDVLFG+LK++V RR D +LIVTSATL+A+KFS +F +  IF IPGR
Sbjct: 699  VVVMDEAHERSLNTDVLFGILKKVVARRRDFKLIVTSATLNAQKFSNFFGSVPIFNIPGR 758

Query: 761  TFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGL 820
            TFPV ILY+K P  DY++AA+   + IH+T P GDIL+F+TGQ+EI+ AC SL ERM+ L
Sbjct: 759  TFPVNILYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFSLKERMEQL 818

Query: 821  ----GKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVID 880
                 + +  L+ILP+YS LP+++Q++IF+    G RK +VATNIAE SLT+DGI+YVID
Sbjct: 819  VSSSSREITNLLILPIYSQLPADLQAKIFQKPEDGARKCIVATNIAETSLTVDGIYYVID 878

Query: 881  PGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTT 940
             G+ K  V+NP+ G+D+L + PIS+A++ QRAGRAGRTGPG CYRLYTESAY NEM P+ 
Sbjct: 879  TGYGKMKVFNPRMGMDALQVFPISRAASDQRAGRAGRTGPGTCYRLYTESAYLNEMLPSP 938

Query: 941  IPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKL 1000
            +PEIQR NLG+  L +K++ I++LL FDFMDPP  + ++++M QL+ LGAL+  G LT L
Sbjct: 939  VPEIQRTNLGNVVLLLKSLKIDNLLDFDFMDPPPQENILNSMYQLWVLGALNNVGGLTDL 998

Query: 1001 GRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFF 1060
            G KM EFPLDPPL+KMLL    L C DE+LTI++M+   ++F+RP+E+  ++D  R KFF
Sbjct: 999  GWKMVEFPLDPPLAKMLLMGERLDCIDEVLTIVSMLSVPSVFFRPKERAEESDAAREKFF 1058

Query: 1061 QPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSA 1120
             PE DHLTLL VY+ WK  ++ G WC ++++Q + LR+A++VR QLL I+ + K+++ S 
Sbjct: 1059 VPESDHLTLLNVYQQWKEHDYRGDWCNDHYLQVKGLRKAREVRSQLLDILKQLKIELRSC 1118

Query: 1121 GKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALF--QRQPDWVIYHEL 1180
            G ++  +RKAI + +F ++AR      Y       P ++HPSSAL+     PD+V+YHEL
Sbjct: 1119 GPDWDIVRKAICSAYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGLGYTPDYVVYHEL 1178

Query: 1181 VMTTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQE 1198
            ++TTKEYM+  T ++P WL EL P +F V D  T M + K+++
Sbjct: 1179 ILTTKEYMQCATSVEPHWLAELGPMFFSVKDSDTSMLEHKKKQ 1196

[Close]

BLAST of Carg23424 vs. TAIR10
Match: AT3G62310.1 (RNA helicase family protein)

HSP 1 Score: 701.4 bits (1809), Expect = 9.5e-202
Identity = 351/665 (52.78%), Postives = 486/665 (73.08%), Query Frame = 0


Query: 559  IQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA-GYTTSGK---- 618
            I E+R++LP++  K+E ++ +++NQ L+++GETGSGKTTQ+ Q++ +A    TS K    
Sbjct: 54   ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 113

Query: 619  -IGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 678
             +GCTQPRRVAAMSV++RVAEE    +GEEVGY+IRFEDC+ P TV+KY+TDGMLLRE +
Sbjct: 114  LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 173

Query: 679  IDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 738
             D  L +Y V++LDEAHERT+ TDVLFGLLK+++K RPDL+L+V SATL+AEKF  YF  
Sbjct: 174  ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 233

Query: 739  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQ 798
              +  +PGR  PVEI YT++PE DYL+AA+ TV+QIH+ EP GDIL+FLTG+EEI+ AC+
Sbjct: 234  APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 293

Query: 799  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAP-------PGKRKVVVATNIAEA 858
             + + +  LG  V  + ++P+YS LP  MQ +IF+PAP       P  RK+VV+TNIAE 
Sbjct: 294  KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 353

Query: 859  SLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYT 918
            SLTIDGI YVIDPGFAKQ VYNP+  ++SL+++PIS+ASA QR+GRAGRT PGKC+RLYT
Sbjct: 354  SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 413

Query: 919  ESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSL 978
            E ++ N++ P T PEI R NL +T LT+K +GI+DL+ FDFMDPP+P+ L+ A+E L  L
Sbjct: 414  EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 473

Query: 979  GALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREK 1038
            GALD++G LTK G  M+EFPLDP ++KML+ S +  CS+EIL++ AM+   N F RPRE 
Sbjct: 474  GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 533

Query: 1039 QAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLS 1098
            Q  AD+ +A+F   EGDHLTLL VY A+K  N    WC+ENF+ +R+++ A +VR+QL+ 
Sbjct: 534  QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 593

Query: 1099 IMDKYKLDVVSAGKN----FTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSA 1158
            IM ++ L + S   N    +  IRKA+ AG+F   A  +    Y T+ +NQ V++HPS+ 
Sbjct: 594  IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 653

Query: 1159 LFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVAD-PTKMSKRKRQERIE 1206
            L   +P+WVIY+E V+T++ ++R VT I  +WLV++A  Y+ +++ P   +KR     IE
Sbjct: 654  L-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRV----IE 713

[Close]

BLAST of Carg23424 vs. Swiss-Prot
Match: sp|Q38953|DEAH5_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana OX=3702 GN=At3g26560 PE=1 SV=2)

HSP 1 Score: 1807.3 bits (4680), Expect = 0.0e+00
Identity = 1031/1209 (85.28%), Postives = 1092/1209 (90.32%), Query Frame = 0


Query: 12   LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMPDYF 71
            L KL +LSLVS VC+ELETHLG  +KVLAEFI ++GR  ETVDEFD  LKE GAEMPDYF
Sbjct: 6    LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYF 65

Query: 72   VRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAKELVKEIELEAH 131
            VRSLL  IH I PP+     K  KK++E D +  KF+ LAI D K++             
Sbjct: 66   VRSLLTTIHGIYPPK----PKSEKKKEEGDDQ--KFKGLAIKDTKDK------------- 125

Query: 132  QKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 191
                               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126  -------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 192  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKHT 251
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     DK  
Sbjct: 186  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYVEEDKGG 245

Query: 252  QNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQMATRRITNAKDV 311
             N        EPELY+VYKGRV+RVMD GCFVQ + FRGKEGLVHVSQMATRR+  AK+ 
Sbjct: 246  AN--------EPELYQVYKGRVTRVMDAGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEF 305

Query: 312  VKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK-KDADDGPRMNPSNTKDDGPV 371
            VKRD EVYVKVIS+S  K SLSMRDVDQ++G+DL+PL+K  D DD  R NPS    DG V
Sbjct: 306  VKRDMEVYVKVISISSDKYSLSMRDVDQNTGRDLIPLRKPSDEDDSSRSNPSYRTKDGQV 365

Query: 372  VRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGLLY 431
             +TG+SGI+IVE++   PSRRPLK+MSSPERWEAKQLIASGVL V+++P YD++GDG+LY
Sbjct: 366  TKTGISGIRIVEENDVAPSRRPLKKMSSPERWEAKQLIASGVLRVDEFPMYDEDGDGMLY 425

Query: 432  QEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERRE 491
            QEEGAEEELEIE+NEDEP FLQGQ+RYS+DMSPVKIFKNPEGSLSRAAALQSAL KERRE
Sbjct: 426  QEEGAEEELEIEMNEDEPAFLQGQTRYSVDMSPVKIFKNPEGSLSRAAALQSALTKERRE 485

Query: 492  VREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKDIS 551
            +REQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK  +
Sbjct: 486  MREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTPT 545

Query: 552  FGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 611
            FGQ+SKLSIQEQR+SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT
Sbjct: 546  FGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTT 605

Query: 612  SGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 671
             GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE
Sbjct: 606  KGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLRE 665

Query: 672  ILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYF 731
            ILID+NLSQYSV+MLDEAHERTI TDVLFGLLK+L+KRR DLRLIVTSATLDAEKFSGYF
Sbjct: 666  ILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAEKFSGYF 725

Query: 732  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFA 791
            FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDIL+FLTGQEEID A
Sbjct: 726  FNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSA 785

Query: 792  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTID 851
            CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+P PPGKRKVVVATNIAEASLTID
Sbjct: 786  CQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTID 845

Query: 852  GIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 911
            GI+YV+DPGFAKQNVYNPKQGL+SLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR
Sbjct: 846  GIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYR 905

Query: 912  NEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDE 971
            NEM PT+IPEIQRINLG TTLTMKAMGINDLLSFDFMDPP PQALISAMEQLYSLGALDE
Sbjct: 906  NEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALISAMEQLYSLGALDE 965

Query: 972  EGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQAD 1031
            EGLLTKLGRKMAEFPL+PPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQAD
Sbjct: 966  EGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQAD 1025

Query: 1032 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKY 1091
            QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENF+QSRSLRRAQDVRKQLLSIMDKY
Sbjct: 1026 QKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKY 1085

Query: 1092 KLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1151
            KLDVV+AGKNFT+IRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV
Sbjct: 1086 KLDVVTAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWV 1145

Query: 1152 IYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPN 1211
            IYH+LVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQERIEPLYDRYHEPN
Sbjct: 1146 IYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPN 1168

Query: 1212 SWRLSKRRA 1220
            SWRLSKRRA
Sbjct: 1206 SWRLSKRRA 1168

[Close]

BLAST of Carg23424 vs. Swiss-Prot
Match: sp|Q14562|DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1)

HSP 1 Score: 1339.3 bits (3465), Expect = 0.0e+00
Identity = 770/1232 (62.50%), Postives = 950/1232 (77.11%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            ++ S     + L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +  +  T D F + L
Sbjct: 11   LIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASL 70

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKE--FKKEKESDGKKGKF----------- 120
             +NGAE  D  + +LLR+I  + PP K    K+   K + E +  K  F           
Sbjct: 71   VKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFPVLCQPDNPSV 130

Query: 121  RALAIGDDKERAKELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
            R +   DD + A +++KE+E       G                       XXXXXXXXX
Sbjct: 131  RTMLDEDDVKVAVDVLKELEALMPSAAGQE--------------------KXXXXXXXXX 190

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241  XXXXXXXXXXXXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQIND 300
            XXXXXXXXX          RDKH       P   EP +  +Y G+V+ +M  GCFVQ+  
Sbjct: 251  XXXXXXXXXKYGERNLDRWRDKHVDR----PPPEEPTIGDIYNGKVTSIMQFGCFVQLEG 310

Query: 301  FRGK-EGLVHVSQMATR-RITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDL 360
             R + EGLVH+S++    R+ N  DVV + Q V VKV+S +G K SLSM+DVDQ +G+DL
Sbjct: 311  LRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDL 370

Query: 361  LPLKKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAK 420
             P ++++         S    D P   + +S  ++ +D +    R+ L R+S PE+WE K
Sbjct: 371  NPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEKWEIK 430

Query: 421  QLIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVK 480
            Q+IA+ VLS  ++P +D+E   L   ++  +E+LEIEL E+EP FL+G ++ S+DMSP+K
Sbjct: 431  QMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIK 490

Query: 481  IFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQ 540
            I KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DP+P+   R +A 
Sbjct: 491  IVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAA 550

Query: 541  ELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQV 600
             +RG+G+   D+PEWKK A+ G   S+G+K+++SI EQR+SLPIYKLK++L+QAVHDNQ+
Sbjct: 551  NMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQI 610

Query: 601  LVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVG 660
            L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG+EVG
Sbjct: 611  LIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVG 670

Query: 661  YAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQ 720
            Y IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY+++MLDEAHERTI TDVLFGLLK+
Sbjct: 671  YTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKK 730

Query: 721  LVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALIT 780
             V++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA+LIT
Sbjct: 731  TVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLIT 790

Query: 781  VLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSR 840
            V+QIHLTEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSEMQ+R
Sbjct: 791  VMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTR 850

Query: 841  IFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQAS 900
            IF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPISQA 
Sbjct: 851  IFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQ 910

Query: 901  AKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSF 960
            AKQRAGRAGRTGPGKCYRLYTE AYR+EM  T +PEIQR NL  T L++KAMGINDLLSF
Sbjct: 911  AKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSF 970

Query: 961  DFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSD 1020
            DFMD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV LGCS+
Sbjct: 971  DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSE 1030

Query: 1021 EILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCF 1080
            E+LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS PWC+
Sbjct: 1031 EMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCY 1090

Query: 1081 ENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEG 1140
            ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KDPQEG
Sbjct: 1091 ENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEG 1150

Query: 1141 YRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKV 1200
            YRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP +FKV
Sbjct: 1151 YRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKV 1210

Query: 1201 ADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1217
            +DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1211 SDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1215

[Close]

BLAST of Carg23424 vs. Swiss-Prot
Match: sp|A2A4P0|DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1)

HSP 1 Score: 1336.2 bits (3457), Expect = 0.0e+00
Identity = 781/1236 (63.19%), Postives = 965/1236 (78.07%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            ++ S     + L KLEYLSLVSKVC+EL+ HLG  DK LAEF+  +  +  T D F + L
Sbjct: 11   LMGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASL 70

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKE--FKKEKESDGKKGKF----------- 120
             +NGAE  D  + +LLR+I  + PP K    K+   K + E +  +  F           
Sbjct: 71   VKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLRELFPVLCQPDNPSA 130

Query: 121  RALAIGDDKERAKELVKEIEL----EAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXX 180
            R +   +D + A +++KE+E      A Q++      XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 131  RTMLDEEDVKVAVDVLKELEALMPSAAGQEKQRDPXXXXXXXXXXXXXXXXXXXXXXXXX 190

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 191  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 250

Query: 241  XXXXXXXXXXXXXXXXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFV 300
            XXXXXXX                RDKH       P   EP +  +Y G+V+ +M  GCFV
Sbjct: 251  XXXXXXXDRKDREKYGERNLDRWRDKHVDR----PPPEEPAIGDIYNGKVTSIMQFGCFV 310

Query: 301  QINDFRGK-EGLVHVSQMATR-RITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHS 360
            Q+   R + EGLVH+S++    R+ N  DVV + Q V VKV+S +G K SLSM+DVDQ +
Sbjct: 311  QLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQET 370

Query: 361  GKDLLPLKKKDADDGPRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPER 420
            G+DL P ++++         S    D P   + +S  ++ +D +    R+ L R+S PE+
Sbjct: 371  GEDLNPNRRRNLVGETNEETSMRNPDRPTHLSLVSAPEVEDDSL---ERKRLTRISDPEK 430

Query: 421  WEAKQLIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDM 480
            WE KQ+IA+ VLS  ++P +D+E   L   ++  +E+LEIEL E+EP FL+G ++ S+DM
Sbjct: 431  WEIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDM 490

Query: 481  SPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGER 540
            SP+KI KNP+GSLS+AA +QSAL KERRE+++ Q+   +DSIP  LN+ W DP+P+   R
Sbjct: 491  SPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGR 550

Query: 541  HLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVH 600
             +A  +RG+G+   D+PEWKK A+ G   S+G+K+++SI EQR+SLPIYKLK++L+QAVH
Sbjct: 551  QIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVH 610

Query: 601  DNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLG 660
            DNQ+L+VIGETGSGKTTQ+TQYLAEAGYT+ GKIGCTQPRRVAAMSVAKRV+EEFGC LG
Sbjct: 611  DNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLG 670

Query: 661  EEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFG 720
            +EVGY IRFEDCT P+TVIKYMTDGMLLRE LID +L+QY+++MLDEAHERTI TDVLFG
Sbjct: 671  QEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFG 730

Query: 721  LLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDA 780
            LLK+ V++R D++LIVTSATLDA KFS YF+   IFTIPGRT+PVEILYTK+PETDYLDA
Sbjct: 731  LLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDA 790

Query: 781  ALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSE 840
            +LITV+QIHLTEP GDIL+FLTGQEEID AC+ LYERMK LG +VPELIILPVYSALPSE
Sbjct: 791  SLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSE 850

Query: 841  MQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPI 900
            MQ+RIF+PAPPG RKVV+ATNIAE SLTIDGI+YV+DPGF KQ VYN K G+D LV+TPI
Sbjct: 851  MQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPI 910

Query: 901  SQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGIND 960
            SQA AKQRAGRAGRTGPGKCYRLYTE AYR+EM  T +PEIQR NL  T L++KAMGIND
Sbjct: 911  SQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGIND 970

Query: 961  LLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDL 1020
            LLSFDFMD P  + LI+AMEQLY+LGALD+EGLLT+LGR+MAEFPL+P L KML+ SV L
Sbjct: 971  LLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHL 1030

Query: 1021 GCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSG 1080
            GCS+E+LTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK   FS 
Sbjct: 1031 GCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSN 1090

Query: 1081 PWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKD 1140
            PWC+ENF+Q+RSLRRAQD+RKQ+L IMD++KLDVVS GK+  +++KAI +GFF +AA+KD
Sbjct: 1091 PWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1150

Query: 1141 PQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR 1200
            PQEGYRTL++ Q VYIHPSSALF RQP+WV+YHELV+TTKEYMREVT IDP+WLVE AP 
Sbjct: 1151 PQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPA 1210

Query: 1201 YFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSK 1217
            +FKV+DPTK+SK+K+Q+R+EPLY+RY EPN+WR+S+
Sbjct: 1211 FFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWRISR 1239

[Close]

BLAST of Carg23424 vs. Swiss-Prot
Match: sp|Q54F05|DHX8_DICDI (ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=3 SV=1)

HSP 1 Score: 1311.6 bits (3393), Expect = 0.0e+00
Identity = 647/966 (66.98%), Postives = 784/966 (81.16%), Query Frame = 0


Query: 259  VDHEPELYKVYKGRVSRVMDTGCFVQINDFRG-KEGLVHVSQMATRR--ITNAKDVVKRD 318
            +D EP LYK+Y G+VS + D GCFV +    G ++GLVH+SQ+ + R  + +  DVVKR+
Sbjct: 195  IDKEPILYKIYDGKVSSINDYGCFVTLEGIAGRRDGLVHISQILSGRTKLNHPSDVVKRN 254

Query: 319  QEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKK-KDADDGPRMNPSNTKDDGPVVRTG 378
            Q+V VK++SV+  K+SLSM+DVDQ +G+DL P +  +                       
Sbjct: 255  QQVKVKILSVASSKISLSMKDVDQSTGRDLNPQQNIQSIISTNSXXXXXXXXXXXXXXXX 314

Query: 379  LSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGLLYQEEG 438
                                R++SP+RW  KQLIASG+LSV + P+YD E   + + EE 
Sbjct: 315  XXXXXXXXXXXXXXXXXXXXRIASPDRWGYKQLIASGILSVPEMPNYDKEVGLVNHDEEQ 374

Query: 439  AEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQ 498
             EE+ +IE NEDEP+FL+G       +SP+KI K P GSL RAA+ Q+AL KER+E + Q
Sbjct: 375  PEEDFDIERNEDEPQFLKGTRMNMQQLSPIKIVKKPNGSLQRAASTQTALSKERKEEKNQ 434

Query: 499  QQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD--MPEWKKDAYGKDISFG 558
            Q+  M+DSIPKDL+ PW DPMPE GERHLAQE+R +     D  +PEWKK   G  I +G
Sbjct: 435  QRNEMMDSIPKDLSLPWHDPMPEAGERHLAQEIRSIAGQGIDTEIPEWKKVTQGSHIQYG 494

Query: 559  QKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSG 618
            + +  SI+EQR+SLPI+ L++  +QAV ++Q+LVVIGETGSGKTTQ+ QYLAEAGY T G
Sbjct: 495  KATSRSIKEQRESLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRG 554

Query: 619  KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 678
            KIGCTQPRRVAAMSV+KRVAEEFGC+LG+EVGYAIRFEDCT P+T+IK+MTDG+LLRE L
Sbjct: 555  KIGCTQPRRVAAMSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECL 614

Query: 679  IDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFN 738
            +D NLS YSV++LDEAHERTI TDVLFGLLKQ ++RRP+L++++TSATL+AEKFS YF N
Sbjct: 615  LDPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRRPELKVLITSATLEAEKFSKYFMN 674

Query: 739  CNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQ 798
              +F IPGRTFPV+I YTK PE DYLDA+LITV+QIHL+EP GDILLFLTGQEEID ACQ
Sbjct: 675  AQLFIIPGRTFPVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQ 734

Query: 799  SLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGI 858
             LYERMK LG NVP+LIILPVYSALPSEMQ++IFEPAPPG RKVV+ATNIAE SLTIDGI
Sbjct: 735  ILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGI 794

Query: 859  FYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNE 918
            +YVIDPGF+KQ  +NPK G+DSLV+ PISQA+A+QR+GRAGRTGPGKCYRLYTESA++NE
Sbjct: 795  YYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNE 854

Query: 919  MSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEG 978
            M  ++IPEIQR NLG+T LTMKAMGINDLL+FDFMDPP  Q L+SAMEQLYSLGALDEEG
Sbjct: 855  MLASSIPEIQRTNLGNTVLTMKAMGINDLLNFDFMDPPPVQTLVSAMEQLYSLGALDEEG 914

Query: 979  LLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQK 1038
            LLT+LGRKMAEFPLDP LSKML+ASVDLGCSDEILT++AM+   N+FYRP+EKQA ADQK
Sbjct: 915  LLTRLGRKMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQK 974

Query: 1039 RAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKL 1098
            +AKFFQPEGDHLTLL VYE+WK   FS PWCFENFVQ+RSLRRAQDVRKQL++IMD+YKL
Sbjct: 975  KAKFFQPEGDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKL 1034

Query: 1099 DVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIY 1158
            D++SAG+N+T+I+KAI +GFF +A++KDP EGY+TLVE QPVYIHPSS LF R PDWVIY
Sbjct: 1035 DIISAGRNYTKIQKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNPDWVIY 1094

Query: 1159 HELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSW 1218
            HELVMTTKEYMREV  IDPKWLVELAP++FK +DP K+SKRKR+E+IEPLYD+Y++PN+W
Sbjct: 1095 HELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKISKRKRKEKIEPLYDKYNDPNAW 1154

HSP 2 Score: 52.8 bits (125), Expect = 3.2e-05
Identity = 24/68 (35.29%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 12 LKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMPDYF 71
          + KLE + L S+VC+ELE  +G GDK+LAEF+  +      + +F+  + EN  + P+  
Sbjct: 1  MDKLERIELESQVCNELERFIGSGDKLLAEFVIGLADENPKLKDFNKAISENVPDFPESL 60

Query: 72 VRSLLRII 80
             L  +I
Sbjct: 61 SSHLFNLI 68

[Close]

BLAST of Carg23424 vs. Swiss-Prot
Match: sp|A1Z9L3|DHX8_DROME (ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 SV=1)

HSP 1 Score: 1285.4 bits (3325), Expect = 0.0e+00
Identity = 774/1244 (62.22%), Postives = 938/1244 (75.40%), Query Frame = 0


Query: 10   DGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMPD 69
            D L+KLEYLSLVSK+C+EL+ HLG  DK LAEFI ++  +  T D F   L +NGAE PD
Sbjct: 2    DELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRKALLDNGAEFPD 61

Query: 70   YFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGK----FRALAI----------GDD 129
              V++L RII+L+ P +     +E     + + KK +    F  LA+           DD
Sbjct: 62   SLVQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLLKMFPGLALPNDTYSKKEESDD 121

Query: 130  KERAKELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 189
             E+ K    E   E H+K    DV                           XXXXXXXXX
Sbjct: 122  DEKVK-AKPEKHSETHKKTDMSDVDAAMMELEALAPGEGATLVRPHKEVSSXXXXXXXXX 181

Query: 190  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 249
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 182  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 241

Query: 250  XXXXXXXXXXXRDKHTQN---------GRHLP-----VDHEPELYKVYKGRVSRVMDTGC 309
            XXXXXXXXXXX                   +P     +  +PE  K+Y G+++ ++  GC
Sbjct: 242  XXXXXXXXXXXXXXXXXXXXXXXXXXCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGC 301

Query: 310  FVQINDFRGK-EGLVHVSQM-ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQ 369
            FVQ+   R + EGLVH+SQ+ A  R+T+  +VV R+Q V VKV+S++GQK+SLSM++VDQ
Sbjct: 302  FVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQKVSLSMKEVDQ 361

Query: 370  HSGKDLLPLKKKDADDGPRMNPSNTKDDGPVVRT----GLSGIKIVEDDVTIPSRRPLKR 429
             SGKDL PL     DD    +  +   DGP   +     L G  +  D+    SR+ + R
Sbjct: 362  DSGKDLNPLSHAPEDD---ESLRDRNPDGPFSSSTSMLNLQGNGMEGDE--HESRKRVTR 421

Query: 430  MSSPERWEAKQLIASGVLSVNDYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQS 489
            +SSPERWE KQ+I+SGVL  ++ P +D+E  GLL ++E  E ++EIE+ E+EP FL G  
Sbjct: 422  ISSPERWEIKQMISSGVLDRSEMPDFDEE-TGLLPKDEDDEADIEIEIVEEEPPFLSGHG 481

Query: 490  RYSIDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPM 549
            R   D+SPV+I KNP+GSL++AA +QSAL KERRE +  Q+   ++++P  LN+ W DP+
Sbjct: 482  RALHDLSPVRIVKNPDGSLAQAAMMQSALSKERREQKMLQREQEIEAMPTSLNKNWIDPL 541

Query: 550  PETGERHLAQELRGVGLSAYDMPEWKKDAY-GKDISFGQKSKLSIQEQRQSLPIYKLKKE 609
            PE   R LA  +RG+  +  ++PEWKK    GK  SFG+K+ L++ EQRQSLPIYKL+ +
Sbjct: 542  PEDESRSLAANMRGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDD 601

Query: 610  LIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEE 669
            LI+AV DNQ+L+VIGETGSGKTTQ+TQYL E G+T  GKIGCTQPRRVAAMSVAKRVAEE
Sbjct: 602  LIKAVTDNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKRVAEE 661

Query: 670  FGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIF 729
            +GCRLG+EVGY IRFEDCT P+T+IKYMTDGMLLRE L++  L  YSV+MLDEAHERTI 
Sbjct: 662  YGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIH 721

Query: 730  TDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE 789
            TDVLFGLLK  V++RP+L+LIVTSATLDA KFS YFF   IFTIPGRTFPVE+LYTK+PE
Sbjct: 722  TDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFPVEVLYTKEPE 781

Query: 790  TDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVY 849
            TDYLDA+LITV+QIHL EP GDILLFLTGQEEID AC+ LYERMK LG +VPELIILPVY
Sbjct: 782  TDYLDASLITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVY 841

Query: 850  SALPSEMQSRIFEPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDS 909
            SALPSEMQ+RIF+PAP G RKVV+ATNIAE SLTIDGIFYV+DPGF KQ VYN K G+DS
Sbjct: 842  SALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDS 901

Query: 910  LVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMK 969
            LV+TPISQA+AKQRAGRAGRTGPGK YRLYTE AYR+EM PT +PEIQR NL  T L +K
Sbjct: 902  LVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLK 961

Query: 970  AMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKML 1029
             MGINDLL FDFMD P  ++L+ A+EQL+SL ALD+EGLLT+LGR+MAEFPL+P LSKML
Sbjct: 962  TMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKML 1021

Query: 1030 LASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWK 1089
            + SV L CSDEILTI++M+   N+FYRP++KQA ADQK+AKF Q EGDHLTLLAVY +WK
Sbjct: 1022 IMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGDHLTLLAVYNSWK 1081

Query: 1090 AKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFF 1149
               FS  WC+ENFVQ R+L+R+QDVRKQLL IMD++KLDVVSAGKN  +I+KAI +GFF 
Sbjct: 1082 NNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFR 1141

Query: 1150 HAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWL 1209
            +AA+KDPQEGYRTLV++Q VYIHPSSALF RQP+WVIYHELV TTKEYMREVT IDPKWL
Sbjct: 1142 NAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWL 1201

Query: 1210 VELAPRYFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRR 1219
            VE AP +F+ +DPTK+SK K+ +R+EPLY++Y EPN+WR+S+ R
Sbjct: 1202 VEFAPSFFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVR 1238

[Close]

BLAST of Carg23424 vs. TrEMBL
Match: tr|A0A1S3C2I4|A0A1S3C2I4_CUCME (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis melo OX=3656 GN=LOC103495726 PE=4 SV=1)

HSP 1 Score: 2061.2 bits (5339), Expect = 0.0e+00
Identity = 1167/1223 (95.42%), Postives = 1184/1223 (96.81%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            MVAS ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CETVDEFD+KL
Sbjct: 1    MVASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK D+EKE KKEKESDGKKGKFRALAIGDD+ERA 
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSEKELKKEKESDGKKGKFRALAIGDDRERAX 120

Query: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXX  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXRD----KHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVH 300
            XXXXXX      +  +NGRH PV HEPELY VYKGRVSRVMDTGCFVQ+NDFRGKEGLVH
Sbjct: 241  XXXXXXXGNGNWRGDRNGRHQPVSHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVH 300

Query: 301  VSQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360
            VSQ+ATRRI+NAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG
Sbjct: 301  VSQIATRRISNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDG 360

Query: 361  PRMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVN 420
            PRMNPS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLSV+
Sbjct: 361  PRMNPSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVS 420

Query: 421  DYPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSR 480
            +YPSYDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSLSR
Sbjct: 421  EYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSR 480

Query: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540
            AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD
Sbjct: 481  AAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYD 540

Query: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKT 600
            MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKT
Sbjct: 541  MPEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKT 600

Query: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660
            TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD
Sbjct: 601  TQVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD 660

Query: 661  TVIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720
            TVIKYMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV
Sbjct: 661  TVIKYMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIV 720

Query: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780
            TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD
Sbjct: 721  TSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD 780

Query: 781  ILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840
            +LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV
Sbjct: 781  VLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKV 840

Query: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900
            VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG
Sbjct: 841  VVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTG 900

Query: 901  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960
            PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI
Sbjct: 901  PGKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALI 960

Query: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020
            SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG
Sbjct: 961  SAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTG 1020

Query: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080
            NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA
Sbjct: 1021 NIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRA 1080

Query: 1081 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140
            QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI
Sbjct: 1081 QDVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYI 1140

Query: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQ 1200
            HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQ
Sbjct: 1141 HPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQ 1200

Query: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1220
            ERIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1201 ERIEPLYDRYHEPNSWRLSKRRA 1223

[Close]

BLAST of Carg23424 vs. TrEMBL
Match: tr|A0A0A0LG89|A0A0A0LG89_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1)

HSP 1 Score: 1999.2 bits (5178), Expect = 0.0e+00
Identity = 1136/1219 (93.19%), Postives = 1153/1219 (94.59%), Query Frame = 0


Query: 1    MVASAANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKL 60
            M AS ANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CE+VDEFD+KL
Sbjct: 1    MAASMANGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKL 60

Query: 61   KENGAEMPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAK 120
            KENGAEMPDYFVRSLLRIIHLILPPQK D+E                             
Sbjct: 61   KENGAEMPDYFVRSLLRIIHLILPPQKGDSE-XXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121  ELVKEIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
                                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241  XXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQM 300
                    +  +NGRH PV+HEPELY VYKGRVSRVMDTGCFVQ+NDFRGKEGLVHVSQ+
Sbjct: 241  VEDGNGNWRGDRNGRHQPVNHEPELYTVYKGRVSRVMDTGCFVQLNDFRGKEGLVHVSQI 300

Query: 301  ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN 360
            ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN
Sbjct: 301  ATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMN 360

Query: 361  PSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPS 420
            PS+TKDDGPVVRTGLSGIKIVEDDVT+PSRRPLKRMSSPERWEAKQLIASGVLSV++YPS
Sbjct: 361  PSDTKDDGPVVRTGLSGIKIVEDDVTVPSRRPLKRMSSPERWEAKQLIASGVLSVSEYPS 420

Query: 421  YDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL 480
            YDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL
Sbjct: 421  YDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSIDMSPVKIFKNPEGSLSRAAAL 480

Query: 481  QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW 540
            QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW
Sbjct: 481  QSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEW 540

Query: 541  KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVT 600
            KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKEL+QAVHDNQVLVVIGETGSGKTTQVT
Sbjct: 541  KKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVT 600

Query: 601  QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 660
            QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK
Sbjct: 601  QYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIK 660

Query: 661  YMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT 720
            YMTDGMLLREILIDDNLSQYSV+MLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT
Sbjct: 661  YMTDGMLLREILIDDNLSQYSVIMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSAT 720

Query: 721  LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLF 780
            LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGD+LLF
Sbjct: 721  LDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDVLLF 780

Query: 781  LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT 840
            LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT
Sbjct: 781  LTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVAT 840

Query: 841  NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC 900
            NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC
Sbjct: 841  NIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKC 900

Query: 901  YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME 960
            YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME
Sbjct: 901  YRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAME 960

Query: 961  QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 1020
            QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY
Sbjct: 961  QLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFY 1020

Query: 1021 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1080
            RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR
Sbjct: 1021 RPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVR 1080

Query: 1081 KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1140
            KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS
Sbjct: 1081 KQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSS 1140

Query: 1141 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIE 1200
            ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPR+FKV+DPTKMSKRKRQERIE
Sbjct: 1141 ALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIE 1200

Query: 1201 PLYDRYHEPNSWRLSKRRA 1220
            PLYDRYHEPNSWRLSKRRA
Sbjct: 1201 PLYDRYHEPNSWRLSKRRA 1218

[Close]

BLAST of Carg23424 vs. TrEMBL
Match: tr|A0A2P6SGE4|A0A2P6SGE4_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0351781 PE=4 SV=1)

HSP 1 Score: 1941.4 bits (5028), Expect = 0.0e+00
Identity = 1081/1211 (89.27%), Postives = 1132/1211 (93.48%), Query Frame = 0


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR CE+VDEFD+KLKE+GAEMP
Sbjct: 5    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAKELVKEIEL 128
            DYFVR+LL IIH ILPP K  +E + KKE  ++G K KF+AL+I D+++R K++ +EIEL
Sbjct: 65   DYFVRTLLTIIHAILPP-KAKSENDSKKESTAEGSKSKFKALSIADNRDRVKDIQREIEL 124

Query: 129  EAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
            EA +K       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 125  EAKEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD 248
            XXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXX                     
Sbjct: 185  XXXXXXXXXXXXXXXXXXXXXXXHTDRSXXXXXXXXXXXGDVREDDVDRRG--------S 244

Query: 249  KHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQMATRRITNA 308
            +  +NG H     EPELYKVYKGRVS+VMDTGCFVQ +DFRGKEGLVHVSQ+ATRRI NA
Sbjct: 245  RDQRNGLH--HSDEPELYKVYKGRVSKVMDTGCFVQFSDFRGKEGLVHVSQIATRRIGNA 304

Query: 309  KDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMNPSNTKDDG 368
            KDVVKRDQEVYVKVIS+SGQKLSLSMRDVDQH+GKDLLPLKK   DD  R NPS +KDDG
Sbjct: 305  KDVVKRDQEVYVKVISISGQKLSLSMRDVDQHTGKDLLPLKKNSEDDSLRTNPSISKDDG 364

Query: 369  PVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGL 428
            PV RTGLSGI+IVE+DVT PSRRPLKRMSSPE+WEAKQLIASGVL V +YP YD+E DG+
Sbjct: 365  PVTRTGLSGIRIVEEDVTAPSRRPLKRMSSPEKWEAKQLIASGVLGVKEYPMYDEETDGM 424

Query: 429  LYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKER 488
            LY+EEGAEEELEIELNEDEP FLQGQ+RYS DMSPVKIFKNPEGSLSRAAALQSALIKER
Sbjct: 425  LYEEEGAEEELEIELNEDEPAFLQGQTRYSADMSPVKIFKNPEGSLSRAAALQSALIKER 484

Query: 489  REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKD 548
            REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK 
Sbjct: 485  REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKT 544

Query: 549  ISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY 608
            ++FGQ+SKLSIQEQRQSLPIYKLKKEL+QAVH+NQVLVVIGETGSGKTTQVTQYLAEAGY
Sbjct: 545  VTFGQRSKLSIQEQRQSLPIYKLKKELVQAVHENQVLVVIGETGSGKTTQVTQYLAEAGY 604

Query: 609  TTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 668
            TT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL
Sbjct: 605  TTMGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 664

Query: 669  REILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 728
            REIL+D+NLSQYSVVMLDEAHERTI TDVLFGLLK+LVKRRPDLRLIVTSATLDAEKFSG
Sbjct: 665  REILLDENLSQYSVVMLDEAHERTIHTDVLFGLLKKLVKRRPDLRLIVTSATLDAEKFSG 724

Query: 729  YFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEID 788
            YFF+CNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGDILLFLTGQEEID
Sbjct: 725  YFFDCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEID 784

Query: 789  FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLT 848
            FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLT
Sbjct: 785  FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLT 844

Query: 849  IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 908
            IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA
Sbjct: 845  IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 904

Query: 909  YRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 968
            YRNEMSPT++PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL
Sbjct: 905  YRNEMSPTSVPEIQRINLGTTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 964

Query: 969  DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 1028
            DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ
Sbjct: 965  DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 1024

Query: 1029 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1088
            ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD
Sbjct: 1025 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1084

Query: 1089 KYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1148
            KYKLDVVSAGKNFT+IRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1085 KYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1144

Query: 1149 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHE 1208
            WVIYHELVMTTKEYMREVTV+DPKWLVELAPR+F VADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1145 WVIYHELVMTTKEYMREVTVVDPKWLVELAPRFFTVADPTKMSKRKRQERIEPLYDRYHE 1204

Query: 1209 PNSWRLSKRRA 1220
            PNSWRLSKRRA
Sbjct: 1205 PNSWRLSKRRA 1204

[Close]

BLAST of Carg23424 vs. TrEMBL
Match: tr|A0A2P6QSS4|A0A2P6QSS4_ROSCH (Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400041 PE=4 SV=1)

HSP 1 Score: 1911.3 bits (4950), Expect = 0.0e+00
Identity = 1065/1211 (87.94%), Postives = 1115/1211 (92.07%), Query Frame = 0


Query: 9    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAEMP 68
            DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGR C  VDEFD+KLKENGAEMP
Sbjct: 5    DDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCGNVDEFDAKLKENGAEMP 64

Query: 69   DYFVRSLLRIIHLILPPQKDDNEKEFKKEKESDGKKGKFRALAIGDDKERAKELVKEIEL 128
            DYFVR+LL IIH ILPP K  +E +   +  ++GKK KF+AL+I D+++R  +L +EIE 
Sbjct: 65   DYFVRTLLTIIHAILPP-KPKSENDSMIDSTTEGKKTKFKALSIADNRDRVNDLQREIE- 124

Query: 129  EAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 188
                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 125  -----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 184

Query: 189  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRD 248
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXXXXX  
Sbjct: 185  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRHTDRSNKHRRDGYXXXXXXXXXXXXXX 244

Query: 249  KHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHVSQMATRRITNA 308
                    L    EPELY+VYKGRVS+VMDTGCFVQ +DFRGKEGLVHVSQMATRRI NA
Sbjct: 245  XXXXXXXXLHHSDEPELYQVYKGRVSKVMDTGCFVQFSDFRGKEGLVHVSQMATRRIGNA 304

Query: 309  KDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGPRMNPSNTKDDG 368
            KDVVKRDQEVYVKVISVSGQKLSLSMRDVDQH+GKDLLPLKK   DD  R NPS +K DG
Sbjct: 305  KDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAHRTNPSVSKHDG 364

Query: 369  PVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVNDYPSYDDEGDGL 428
            PV RTGLSGI+IVE++   PSRRPLKRMSSPE+WEAKQLIASGVL V +YP YD+E +G+
Sbjct: 365  PVTRTGLSGIRIVEENNVAPSRRPLKRMSSPEKWEAKQLIASGVLGVTEYPMYDEETEGM 424

Query: 429  LYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRAAALQSALIKER 488
            LY+EEGAEEELEIELNEDEP FLQGQSRYS+DMSPVKIFKNPEGSLSRAAALQSALIKER
Sbjct: 425  LYEEEGAEEELEIELNEDEPAFLQGQSRYSVDMSPVKIFKNPEGSLSRAAALQSALIKER 484

Query: 489  REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAYGKD 548
            REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDA+GK 
Sbjct: 485  REVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKT 544

Query: 549  ISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGY 608
            +SFGQ+SKLS+QEQRQSLPIYKLKKEL+QAVH+NQVLVVIGETGSGKTTQVTQYLAEAGY
Sbjct: 545  VSFGQRSKLSLQEQRQSLPIYKLKKELVQAVHENQVLVVIGETGSGKTTQVTQYLAEAGY 604

Query: 609  TTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 668
            TT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL
Sbjct: 605  TTMGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLL 664

Query: 669  REILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVTSATLDAEKFSG 728
            REILID+NLSQYSVVMLDEAHERTI TDVLFGLLK+L+KRRPDLRLIVTSATLDAEKFSG
Sbjct: 665  REILIDENLSQYSVVMLDEAHERTIHTDVLFGLLKKLIKRRPDLRLIVTSATLDAEKFSG 724

Query: 729  YFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILLFLTGQEEID 788
            YFF+CNIFTIPGRTFPVEILYTKQPE+DYLDA+LITVLQIHLTEPEGDILLFLTGQEEID
Sbjct: 725  YFFDCNIFTIPGRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEID 784

Query: 789  FACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVVVATNIAEASLT 848
            F+CQSL+ERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVVVATNIAEASLT
Sbjct: 785  FSCQSLFERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLT 844

Query: 849  IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 908
            IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA
Sbjct: 845  IDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA 904

Query: 909  YRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 968
            YRNEMSPT++PEIQRINLG TTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL
Sbjct: 905  YRNEMSPTSVPEIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGAL 964

Query: 969  DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQ 1028
            DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILT+IAMIQTGNIFYRPREKQAQ
Sbjct: 965  DEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQ 1024

Query: 1029 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1088
            ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD
Sbjct: 1025 ADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMD 1084

Query: 1089 KYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1148
            KYKLDVVSAGKNFTQIRKAITAGFFFH ARKDPQEGYRTLVENQPVYIHPSSALFQRQPD
Sbjct: 1085 KYKLDVVSAGKNFTQIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPD 1144

Query: 1149 WVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQERIEPLYDRYHE 1208
            W+IYHELVMTTKEYMREVTV+DPKWLVELAPR+FKVADPTKMSKRKRQERIEPLYDRYHE
Sbjct: 1145 WIIYHELVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHE 1190

Query: 1209 PNSWRLSKRRA 1220
            PNSWRLSKRRA
Sbjct: 1205 PNSWRLSKRRA 1190

[Close]

BLAST of Carg23424 vs. TrEMBL
Match: tr|K7M8L9|K7M8L9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100790809 PE=4 SV=1)

HSP 1 Score: 1910.2 bits (4947), Expect = 0.0e+00
Identity = 1082/1222 (88.54%), Postives = 1123/1222 (91.90%), Query Frame = 0


Query: 7    NGDDGLKKLEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRRCETVDEFDSKLKENGAE 66
            N +DGLKKLEYLSLVSKVC+ELE+H G GDKVLAEFITE+GR  E V+EFD+KLKENGAE
Sbjct: 5    NPEDGLKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKENGAE 64

Query: 67   MPDYFVRSLLRIIHLILPPQKDDNEKEFKKEKES-DGKKGKFRALAIGDDKERAKELVK- 126
            MPDYFVR+LL IIH ILPP+  D+    KKEK+S  GK  KF+ALAI D+++RAKEL K 
Sbjct: 65   MPDYFVRTLLTIIHAILPPKSKDS----KKEKDSVSGKTTKFKALAIADNRDRAKELQKX 124

Query: 127  -------EIELEAHQKRGDRDVQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
                       E  +  G RD                   XXXXXXXXXXXXX     XX
Sbjct: 125  XXXXXXXXXXXEIEEDDGYRD------------------RXXXXXXXXXXXXXEEDVRXX 184

Query: 187  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 246
            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 185  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244

Query: 247  XXXXXXXXXRDKHTQNGRHLPVDHEPELYKVYKGRVSRVMDTGCFVQINDFRGKEGLVHV 306
            XXXXXXXXX               E ELY VYKGR+SRVM+TGCFVQ++DFRGKEGLVHV
Sbjct: 245  XXXXXXXXXXXXXXXXXXXXXXXGELELYAVYKGRISRVMETGCFVQLDDFRGKEGLVHV 304

Query: 307  SQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHSGKDLLPLKKKDADDGP 366
            SQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQH+GKDLLPLKK   DD  
Sbjct: 305  SQMATRRITNAKDVVKRDQEVYVKVISVSGQKLSLSMRDVDQHTGKDLLPLKKSSEDDAM 364

Query: 367  RMNPSNTKDDGPVVRTGLSGIKIVEDDVTIPSRRPLKRMSSPERWEAKQLIASGVLSVND 426
            RMNP ++K  GP  RTGLSGI+IVE+D    SRRPLKRMSSPERWEAKQLIASGVLSV++
Sbjct: 365  RMNPQDSK-GGPAARTGLSGIRIVEEDDAGSSRRPLKRMSSPERWEAKQLIASGVLSVSE 424

Query: 427  YPSYDDEGDGLLYQEEGAEEELEIELNEDEPEFLQGQSRYSIDMSPVKIFKNPEGSLSRA 486
            YP+YDDEGDGLLYQEEGAEEELEIELNEDEP FLQGQSRYS+DMSPVKIFKNPEGSL RA
Sbjct: 425  YPTYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRA 484

Query: 487  AALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDM 546
            AALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPE+GERHLAQELRGVGLSAYDM
Sbjct: 485  AALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDM 544

Query: 547  PEWKKDAYGKDISFGQKSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTT 606
            PEWKKDAYGK I+FGQ+SKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTT
Sbjct: 545  PEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTT 604

Query: 607  QVTQYLAEAGYTTSGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 666
            QVTQYLAEAGYTT GKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT
Sbjct: 605  QVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDT 664

Query: 667  VIKYMTDGMLLREILIDDNLSQYSVVMLDEAHERTIFTDVLFGLLKQLVKRRPDLRLIVT 726
            VIKYMTDGMLLREIL+D+NLSQYSV+MLDEAHERTI TDVLFGLLKQLVKRRP+LRLIVT
Sbjct: 665  VIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVT 724

Query: 727  SATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDI 786
            SATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPE+DYLDAALITVLQIHLTEPEGDI
Sbjct: 725  SATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDI 784

Query: 787  LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFEPAPPGKRKVV 846
            LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIF+PAPPGKRKVV
Sbjct: 785  LLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVV 844

Query: 847  VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGP 906
            VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGP
Sbjct: 845  VATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGP 904

Query: 907  GKCYRLYTESAYRNEMSPTTIPEIQRINLGHTTLTMKAMGINDLLSFDFMDPPSPQALIS 966
            GKCYRLYTESAYRNEMSPTTIPEIQRINLG TTL MKAMGINDLLSFDFMDPPSPQALIS
Sbjct: 905  GKCYRLYTESAYRNEMSPTTIPEIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALIS 964

Query: 967  AMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 1026
            AMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN
Sbjct: 965  AMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGN 1024

Query: 1027 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQ 1086
            IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQ
Sbjct: 1025 IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQ 1084

Query: 1087 DVRKQLLSIMDKYKLDVVSAGKNFTQIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIH 1146
            DVRKQLL+IMDKYKLDVVSAGKNFT++RKAITAGFFFHA+RKDPQEGYRTLVENQPVYIH
Sbjct: 1085 DVRKQLLTIMDKYKLDVVSAGKNFTKVRKAITAGFFFHASRKDPQEGYRTLVENQPVYIH 1144

Query: 1147 PSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQE 1206
            PSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQE
Sbjct: 1145 PSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRYFKVADPTKMSKRKRQE 1203

Query: 1207 RIEPLYDRYHEPNSWRLSKRRA 1220
            RIEPLYDRYHEPNSWRLSKRRA
Sbjct: 1205 RIEPLYDRYHEPNSWRLSKRRA 1203

The following BLAST results are available for this feature:

BLAST of Carg23424 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946177.1	0.0e+00	100.00	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita mo...	[more]
XP_022999145.1	0.0e+00	98.62	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita ma...	[more]
XP_023521965.1	0.0e+00	98.69	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita pe...	[more]
XP_008455589.1	0.0e+00	95.42	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [C...	[more]
XP_022965541.1	0.0e+00	93.91	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 [Cucurbita ma...	[more]

BLAST of Carg23424 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26560.1	0.0e+00	85.28	ATP-dependent RNA helicase, putative	[more]
AT1G32490.1	1.2e-225	57.40	RNA helicase family protein	[more]
AT2G35340.1	4.5e-220	55.95	helicase domain-containing protein	[more]
AT5G13010.1	1.8e-216	48.24	RNA helicase family protein	[more]
AT3G62310.1	9.5e-202	52.78	RNA helicase family protein	[more]

BLAST of Carg23424 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q38953\|DEAH5_ARATH	0.0e+00	85.28	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsi...	[more]
sp\|Q14562\|DHX8_HUMAN	0.0e+00	62.50	ATP-dependent RNA helicase DHX8 OS=Homo sapiens OX=9606 GN=DHX8 PE=1 SV=1	[more]
sp\|A2A4P0\|DHX8_MOUSE	0.0e+00	63.19	ATP-dependent RNA helicase DHX8 OS=Mus musculus OX=10090 GN=Dhx8 PE=2 SV=1	[more]
sp\|Q54F05\|DHX8_DICDI	0.0e+00	66.98	ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum OX=44689 GN=dhx8 PE=...	[more]
sp\|A1Z9L3\|DHX8_DROME	0.0e+00	62.22	ATP-dependent RNA helicase DHX8 OS=Drosophila melanogaster OX=7227 GN=pea PE=1 S...	[more]

BLAST of Carg23424 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C2I4\|A0A1S3C2I4_CUCME	0.0e+00	95.42	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Cucumis me...	[more]
tr\|A0A0A0LG89\|A0A0A0LG89_CUCSA	0.0e+00	93.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013240 PE=4 SV=1	[more]
tr\|A0A2P6SGE4\|A0A2P6SGE4_ROSCH	0.0e+00	89.27	Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0351781 PE=4 S...	[more]
tr\|A0A2P6QSS4\|A0A2P6QSS4_ROSCH	0.0e+00	87.94	Putative RNA helicase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400041 PE=4 S...	[more]
tr\|K7M8L9\|K7M8L9_SOYBN	0.0e+00	88.54	Uncharacterized protein OS=Glycine max OX=3847 GN=100790809 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding
GO:0004386	helicase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR012340	NA-bd_OB-fold
IPR027417	P-loop_NTPase
IPR002464	DNA/RNA_helicase_DEAH_CS
IPR011709	DUF1605
IPR011545	DEAD/DEAH_box_helicase_dom
IPR003029	S1_domain
IPR007502	Helicase-assoc_dom
IPR014001	Helicase_ATP-bd
IPR022967	S1_dom
IPR001650	Helicase_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23424-RA	Carg23424-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..136
None	No IPR available	COILS	Coil	Coil	coord: 477..497
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 742..916 e-value: 5.6E-72 score: 243.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 538..741 e-value: 6.2E-90 score: 302.3
None	No IPR available	GENE3D	G3DSA:2.40.50.140		coord: 260..346 e-value: 2.6E-26 score: 93.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..372
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 336..361
None	No IPR available	PANTHER	PTHR18934:SF120	SUBFAMILY NOT NAMED	coord: 234..1218
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 234..1218
None	No IPR available	CDD	cd05684	S1_DHX8_helicase	coord: 266..342 e-value: 2.4584E-35 score: 130.052
None	No IPR available	CDD	cd00046	DEXDc	coord: 583..721 e-value: 3.44792E-32 score: 123.216
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 792..896 e-value: 1.2E-18 score: 78.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 764..896 e-value: 5.5E-13 score: 49.2
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 757..937 score: 17.171
IPR001650	Helicase, C-terminal	CDD	cd00079	HELICc	coord: 746..903 e-value: 1.33899E-14 score: 71.5
IPR022967	RNA-binding domain, S1	SMART	SM00316	S1_6	coord: 264..335 e-value: 2.4E-18 score: 77.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 564..748 e-value: 5.0E-35 score: 132.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 576..739 score: 20.6
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 957..1047 e-value: 2.1E-41 score: 153.5
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 958..1046 e-value: 1.9E-25 score: 89.1
IPR003029	S1 domain	PFAM	PF00575	S1	coord: 267..333 e-value: 3.4E-12 score: 46.4
IPR003029	S1 domain	PROSITE	PS50126	S1	coord: 266..335 score: 17.006
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 572..722 e-value: 4.6E-8 score: 32.9
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 1104..1180 e-value: 4.7E-25 score: 87.7
IPR002464	DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site	PROSITE	PS00690	DEAH_ATP_HELICASE	coord: 681..690
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 556..1090
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	SSF50249	Nucleic acid-binding proteins	coord: 263..339

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23424	Cla019839	Watermelon (97103) v1	carwmB0290
Carg23424	Csa2G013240	Cucumber (Chinese Long) v2	carcuB0324
Carg23424	MELO3C004343	Melon (DHL92) v3.5.1	carmeB0298
Carg23424	ClCG02G016270	Watermelon (Charleston Gray)	carwcgB0290
Carg23424	CSPI02G03330	Wild cucumber (PI 183967)	carcpiB0330
Carg23424	Cucsa.133580	Cucumber (Gy14) v1	carcgyB0349
Carg23424	CmaCh05G011730	Cucurbita maxima (Rimu)	carcmaB0410
Carg23424	CmaCh12G010970	Cucurbita maxima (Rimu)	carcmaB0409
Carg23424	CmoCh05G011980	Cucurbita moschata (Rifu)	carcmoB0405
Carg23424	CmoCh12G011140	Cucurbita moschata (Rifu)	carcmoB0404
Carg23424	Lsi11G004800	Bottle gourd (USVL1VR-Ls)	carlsiB271
Carg23424	Cp4.1LG11g09650	Cucurbita pepo (Zucchini)	carcpeB0410
Carg23424	Cp4.1LG07g09280	Cucurbita pepo (Zucchini)	carcpeB0411
Carg23424	CsGy2G003430	Cucumber (Gy14) v2	carcgybB0310
Carg23424	MELO3C004343.2	Melon (DHL92) v3.6.1	carmedB0309
Carg23424	CsaV3_2G004480	Cucumber (Chinese Long) v3	carcucB0330
Carg23424	Cla97C02G042110	Watermelon (97103) v2	carwmbB0306
Carg23424	Bhi06G001485	Wax gourd	carwgoB0384

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23424	Carg17571	Silver-seed gourd	carcarB325

The following block(s) are covering this gene:

None