Cp4.1LG07g09110 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG07g09110
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionpeptidoglycan-binding LysM domain-containing protein
LocationCp4.1LG07 : 8094107 .. 8098165 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTGCTGTTGCGACGAAGATGACGACGTTGAGATCCTGAGGCATCTTCATCCCTCACCGACCGTTCAGTCTCCGCCGCAGCAGCAGCTGCAGCAGCAGCCTACGCTACCGGATTCTTCCACTGCCGTACTGTCTCCGATGAACTCTCACTTCTTCGCCCTCTCCTGCCGCGACATCCTTCGCCTCATCTTTGAGAAGCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGAACTCTGTTGCTTCCGATCAGGAAATTGTTTCCGGTGCTTTCAAAGCGCCGTGGAAGGTTAAGGATGTAATAGGGAAGCCGAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTCGCGATCTCTCATCGGATTCTCCGCGGTGATAGCTTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTATGCGCTTCGAAAACTGTTTAATTCATATGAAATTGACTGGAAACAGTAGGACGAGTATAATTTTTGTAGAGTTTTTTAGTTTTGAGGAGTTGCGATCATCAATTTTCTTTGATTGTACTTTCCATCTGGCTGGAGTTTAATCTTGTTCGTTTGAAGAACAAGATTGTCAGACGGTTTTATCGCTGTTCAAACTTCAAAAGTCCTCTTACTGAGTCCTTTATTTGTTGAAGGCGAAACCAGGCTAACTGAAAGTAAGAAAATTCGATTGTAGTGAACATTTTGAACATTCACTATTCTGTTAGAGATGAATGATTTATTGTAGCAATGTAGCTTATTGTTGTTCATTTTCTTGAACATTGATCTTGAAGAATCACTCGTGCTCTGATCATAAATTGAAATCTGTCTTATCTTCCACAACAATACATAGACTTAACTGAAGAGTTGATTAGTATTTGATACTCTGTAGCTTGTGTTCCTAAAACTTGAAGTCCTTGTAAAATATCTATTAAGAAGGAAGATCATGTTGAATTGTTAAAATCCAACTCTTTTCTATGACTATGGACTACGATGTATTGTTGAACTCTCTAGTCGTCTGTGTTAGACGAACACGACTCTCCACAATGGTATGAGATTGTCCACTTTAAGCATAAGCTCTCATGGGTTTGCTTTGAGCTTCCCCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGAACAAACACTTGAAACTTCTGTCTTTCACCTTAATACATGATTTACAACAATGAAGAACGCATTTGTTGTTGTAGTTCGTAGTTTTTTTCCCCAGCTCCCTAATCCTTGTAAATTGTAAAATATCAATTTAGAAGGATCAAGTATAATTGTTGAGATCAACCTTTTTGATATTGTTCTCGATGGCTATGGACTCTGGTGTAATTTATTTCACAATATACTGTTCTTGATGCTTATGACCTTTCTTGTATTGATTTCACAAACGTATTGTTCTTGATGGTTACAGACTTTGGTGTGTCGATTTCGTAAATGTATTGTTCTTGATGGTTACAGACTTTGGTGTGTCAATTTTGTAAATGTATTGTTCTTGATGGTTACCGACTTTGGTGTGTCGATTTCGTAAATGTATTGCTCTTGATGGTTACAAACTTCGGTGTGTCAATTTCATAAATGTATTGTTCTTGTCGATTTCGTAAATGTATTGTTCTTGATGGTTACAGACTTTAGTGTGTCGATTTCGTAAATGTATTGTTCTTGATGATTACAGAGGTGTGTTGATTTCGTAAATGTATTGTTCTGATGGTTATGGACCTTGTTGTTTTGATCTCGTAAATACACTGTTCTCGTAGGTCATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCAAGAGAAAGATTGCTAATCCCCATTGGCAATCCCAATATACTTATAAACAGTATATGCTACATCGAGATGGACGCTATCGCGAAACGGGAAGTTGCGACGTTGTATTTGGATGGCATCCCCACGACCCATCATTTATATGGTAAGGAGACAGATGATCATGGTATGTCCTCTGTTCAAGTGAAGAAACGAGTACTCCATTCATTGAGTCGGAGCATGATGGTCGACGATGAAACCGCTCAATATTACTTATCCATTTCCGATGGCGATCCTCGAGCTGCTCTCACAGAATTCGCCGAAGACATCAGGTGGGAGAGGCATATGGGCATGGCCTAG

mRNA sequence

ATGGGGTGCTGTTGCGACGAAGATGACGACGTTGAGATCCTGAGGCATCTTCATCCCTCACCGACCGTTCAGTCTCCGCCGCAGCAGCAGCTGCAGCAGCAGCCTACGCTACCGGATTCTTCCACTGCCGTACTGTCTCCGATGAACTCTCACTTCTTCGCCCTCTCCTGCCGCGACATCCTTCGCCTCATCTTTGAGAAGCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGAACTCTGTTGCTTCCGATCAGGAAATTGTTTCCGGTGCTTTCAAAGCGCCGTGGAAGGTTAAGGATGTAATAGGGAAGCCGAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTCGCGATCTCTCATCGGATTCTCCGCGGTGATAGCTTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTCATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCAAGAGAAAGATTGCTAATCCCCATTGGCAATCCCAATATACTTATAAACAGTATATGCTACATCGAGATGGACGCTATCGCGAAACGGGAAGTTGCGACGTTGTATTTGGATGGCATCCCCACGACCCATCATTTATATGGTAAGGAGACAGATGATCATGGTATGTCCTCTGTTCAAGTGAAGAAACGAGTACTCCATTCATTGAGTCGGAGCATGATGGTCGACGATGAAACCGCTCAATATTACTTATCCATTTCCGATGGCGATCCTCGAGCTGCTCTCACAGAATTCGCCGAAGACATCAGGTGGGAGAGGCATATGGGCATGGCCTAG

Coding sequence (CDS)

ATGGGGTGCTGTTGCGACGAAGATGACGACGTTGAGATCCTGAGGCATCTTCATCCCTCACCGACCGTTCAGTCTCCGCCGCAGCAGCAGCTGCAGCAGCAGCCTACGCTACCGGATTCTTCCACTGCCGTACTGTCTCCGATGAACTCTCACTTCTTCGCCCTCTCCTGCCGCGACATCCTTCGCCTCATCTTTGAGAAGCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTCCCGTCTCTGGAACTCTGTTGCTTCCGATCAGGAAATTGTTTCCGGTGCTTTCAAAGCGCCGTGGAAGGTTAAGGATGTAATAGGGAAGCCGAGCTCCGGGAGCTTCTGGAGAGATAATTGCCTTGGAAAGTTCGCGATCTCTCATCGGATTCTCCGCGGTGATAGCTTGGCTAGTCTTGCCGTTAAGTATTCGGTTCAGGTCATAGACATAAAACGTCTAAACAACATGATGAGCGACCATGGCATATACTCAAGAGAAAGATTGCTAATCCCCATTGGCAATCCCAATATACTTATAAACAGTATATGCTACATCGAGATGGACGCTATCGCGAAACGGGAAGTTGCGACGTTGTATTTGGATGGCATCCCCACGACCCATCATTTATATGGTAAGGAGACAGATGATCATGGTATGTCCTCTGTTCAAGTGAAGAAACGAGTACTCCATTCATTGAGTCGGAGCATGATGGTCGACGATGAAACCGCTCAATATTACTTATCCATTTCCGATGGCGATCCTCGAGCTGCTCTCACAGAATTCGCCGAAGACATCAGGTGGGAGAGGCATATGGGCATGGCCTAG

Protein sequence

MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA
BLAST of Cp4.1LG07g09110 vs. Swiss-Prot
Match: FB60_ARATH (F-box protein At1g55000 OS=Arabidopsis thaliana GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 4.2e-75
Identity = 134/220 (60.91%), Postives = 173/220 (78.64%), Query Frame = 1

Query: 54  ALSCRDILRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSG 113
           AL CRD L +IF+KL++ DLAR+SCV ++WNSVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 114 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIG 173
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 174 NPNILINSICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLS 233
           NP IL N+ CY+E+D  AKREVA LYL+G P         T+     S   K+R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 234 RSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGM 274
           RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

BLAST of Cp4.1LG07g09110 vs. TrEMBL
Match: A0A0A0LFS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 4.5e-132
Identity = 238/274 (86.86%), Postives = 249/274 (90.88%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCCCD+DDDVEILRHL+PSP + SPP Q     P   D S A+LSPMNSHFFALSCRDI
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQ-----PPPADHSAAILSPMNSHFFALSCRDI 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNC
Sbjct: 61  LRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNC 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LIN
Sbjct: 121 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLIN 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240
           SICYIEMDAIAKREVA LYLDGIP T HLYGK T + GMSSVQV KRVLHSLSRSMMVDD
Sbjct: 181 SICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDD 240

Query: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           ETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 ETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA 269

BLAST of Cp4.1LG07g09110 vs. TrEMBL
Match: M5WCC8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010076mg PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 4.4e-95
Identity = 175/277 (63.18%), Postives = 213/277 (76.90%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCC DE++D +IL  L+P+ T +            + D S + +SPMNSHF AL+CRD 
Sbjct: 1   MGCCGDEENDDDILNPLNPTTTTE------------ILDFSDSTISPMNSHFSALTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFEKL IPDLARSSCV R+WNSVASDQEIV+ AFKAPW +K +IGKP+SG+FWRDN 
Sbjct: 61  LRLIFEKLPIPDLARSSCVCRVWNSVASDQEIVTRAFKAPWNLKHIIGKPASGNFWRDNS 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRI+RGDS+ASLAVKYSVQV+DIKRLNN MS+HGIYSRERLLIPI NP +L+ 
Sbjct: 121 LGKFAISHRIVRGDSIASLAVKYSVQVMDIKRLNNTMSEHGIYSRERLLIPISNPEMLLQ 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLY---GKETDDHGMSSVQVKKRVLHSLSRSMM 240
           + CY+E+D  AKREVA LYL+G P  H         T     + +Q KKRV+ SL RSM 
Sbjct: 181 ATCYVEVDTCAKREVAVLYLEGGPELHKTTSNGSSSTSSCSATDLQSKKRVIESLRRSMQ 240

Query: 241 VDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           +DD TA YYL+I+DGDPRAAL++F++D+RWE H+G A
Sbjct: 241 IDDATAHYYLTIADGDPRAALSQFSQDLRWENHLGFA 265

BLAST of Cp4.1LG07g09110 vs. TrEMBL
Match: W9SEY0_9ROSA (F-box protein OS=Morus notabilis GN=L484_000452 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 4.8e-94
Identity = 174/274 (63.50%), Postives = 214/274 (78.10%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCCCDE+DD +IL+HL+PS + Q+          +     + V+SPMNSHF AL+CRD 
Sbjct: 1   MGCCCDEEDD-DILKHLNPSISTQTLTLDPCSSSTSFSGDCSDVISPMNSHFSALTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LR IFEKL +PDLAR+SCV R+WNSVASD+EI+S AF+APWK+K V+G P SGSFWRDN 
Sbjct: 61  LRAIFEKLPVPDLARASCVCRVWNSVASDKEILSRAFRAPWKLKRVVGDPVSGSFWRDNG 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRI+RGDS+ASLAVKYSVQV+DIKRLNNMMS+HGIYSRERLLIP+ + N+LI 
Sbjct: 121 LGKFAISHRIVRGDSVASLAVKYSVQVMDIKRLNNMMSEHGIYSRERLLIPLSDQNVLIG 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240
             CY+E+DA A+REVA LYLDG                 +S+Q +KRV+HSL RSM VDD
Sbjct: 181 RTCYVELDAYARREVAVLYLDGAGPDRKAESASLLQR-TTSLQARKRVIHSLRRSMQVDD 240

Query: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
            TA+YYLSIS+GDPRAA +EF+ D+RWER +G++
Sbjct: 241 GTAEYYLSISNGDPRAAFSEFSGDLRWEREVGLS 272

BLAST of Cp4.1LG07g09110 vs. TrEMBL
Match: A0A061F3R2_THECC (Peptidoglycan-binding LysM domain-containing protein isoform 1 OS=Theobroma cacao GN=TCM_026548 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 4.5e-92
Identity = 180/276 (65.22%), Postives = 211/276 (76.45%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           M CCCD++DD   L     +P   S         PT+ DS TA +SPMNSHF AL+CRD 
Sbjct: 1   MSCCCDQNDDESALT----TPLSSS-------SSPTVTDS-TATISPMNSHFSALTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFEKLS+ DLAR+SCV + WN+VASD E+V  AFKAPWK+ +V+GKPSSGSFWRDN 
Sbjct: 61  LRLIFEKLSLTDLARASCVCKAWNAVASDDEMVVEAFKAPWKLLEVVGKPSSGSFWRDNG 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           +GKFAISHRILRG+S+ASLAVKYSVQV+DIKRLNNMMSDHGIYSRERLLIPI NP++LIN
Sbjct: 121 IGKFAISHRILRGESVASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPISNPDLLIN 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTH--HLYGKETDDHGMSSVQVKKRVLHSLSRSMMV 240
             CYIE+D  AKREVA LYLDG P      L  + T D G      K+RV+ SL RSM V
Sbjct: 181 GTCYIELDTYAKREVAVLYLDGKPDRKPGTLLKRVTSDRG------KRRVIDSLKRSMQV 240

Query: 241 DDETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           DD TAQYYLSIS+GDPRAAL++F+ D+ WER +G+A
Sbjct: 241 DDGTAQYYLSISNGDPRAALSQFSSDLSWERQIGLA 258

BLAST of Cp4.1LG07g09110 vs. TrEMBL
Match: A0A0D2S5A1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G241900 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.5e-90
Identity = 177/276 (64.13%), Postives = 205/276 (74.28%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           M CCCDE+DD   L          + P       P L DS TA +SPMNSHF AL+CRD 
Sbjct: 1   MSCCCDENDDESTL----------TSPLNSFSSNPILIDS-TATISPMNSHFAALTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFEKLS+ DLAR+SCV + WN+VASD  +V  AFKAPWK+ DV+G PSS SFWRDN 
Sbjct: 61  LRLIFEKLSLADLARASCVCKTWNAVASDDNMVVEAFKAPWKLLDVVGTPSSRSFWRDNG 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           +GKFAISHRILRG+++ASLAVKYS QV DIKRLNNMMSDHGIYSRERLLIP+ NP+ILIN
Sbjct: 121 IGKFAISHRILRGETVASLAVKYSSQVTDIKRLNNMMSDHGIYSRERLLIPVSNPDILIN 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTH--HLYGKETDDHGMSSVQVKKRVLHSLSRSMMV 240
             CYIE+D  AKREVA LYLDG P +    L  + T D G      K+RV+ SL RSM V
Sbjct: 181 GTCYIELDTYAKREVAVLYLDGKPESKPGTLLNRVTSDRG------KRRVIDSLKRSMHV 240

Query: 241 DDETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           DD TAQYYLSIS+GDPRAAL++F+ D+RWER  G+A
Sbjct: 241 DDGTAQYYLSISNGDPRAALSQFSSDLRWERQTGLA 259

BLAST of Cp4.1LG07g09110 vs. TAIR10
Match: AT1G55000.1 (AT1G55000.1 peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-76
Identity = 134/220 (60.91%), Postives = 173/220 (78.64%), Query Frame = 1

Query: 54  ALSCRDILRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSG 113
           AL CRD L +IF+KL++ DLAR+SCV ++WNSVA++ ++V  AF APW++K+++G+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 114 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIG 173
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV+DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 174 NPNILINSICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLS 233
           NP IL N+ CY+E+D  AKREVA LYL+G P         T+     S   K+R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 234 RSMMVDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGM 274
           RSM VDD TA YYL+I++GDPR+AL+EF+ D+RWER  G+
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

BLAST of Cp4.1LG07g09110 vs. TAIR10
Match: AT5G08200.1 (AT5G08200.1 peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 52.0 bits (123), Expect = 6.8e-07
Identity = 26/65 (40.00%), Postives = 43/65 (66.15%), Query Frame = 1

Query: 110 PSSGS--FWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRER 169
           PSS S  F   N   +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + 
Sbjct: 60  PSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKMNNLVTDLQMFALKS 119

Query: 170 LLIPI 173
           L IP+
Sbjct: 120 LQIPL 124

BLAST of Cp4.1LG07g09110 vs. TAIR10
Match: AT5G23130.1 (AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein)

HSP 1 Score: 48.9 bits (115), Expect = 5.8e-06
Identity = 26/63 (41.27%), Postives = 40/63 (63.49%), Query Frame = 1

Query: 110 PSSGSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLL 169
           PSS S     C G   I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L 
Sbjct: 60  PSSAS----TCAGY--IEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLR 116

Query: 170 IPI 173
           IP+
Sbjct: 120 IPL 116

BLAST of Cp4.1LG07g09110 vs. NCBI nr
Match: gi|659070321|ref|XP_008454537.1| (PREDICTED: F-box protein At1g55000 [Cucumis melo])

HSP 1 Score: 479.6 bits (1233), Expect = 3.8e-132
Identity = 239/274 (87.23%), Postives = 250/274 (91.24%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCCCD+DDDVEILRHL+PSP V SPP Q     P   D STA+LSPMNSHFFALSCRDI
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPLQ-----PPPADHSTAILSPMNSHFFALSCRDI 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFE LSIPDLARSSCV RLW+SVASDQEIV+GAFKAPWKVKDV+GKPSS SFWRDNC
Sbjct: 61  LRLIFEHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNC 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPNILIN
Sbjct: 121 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240
           SICYIEMDAIAKREVA LYLDGIP T HLYGK T + GMSSVQV KR+LHSLSRSMMVDD
Sbjct: 181 SICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRLLHSLSRSMMVDD 240

Query: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           ETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 ETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA 269

BLAST of Cp4.1LG07g09110 vs. NCBI nr
Match: gi|449442811|ref|XP_004139174.1| (PREDICTED: F-box protein At1g55000 [Cucumis sativus])

HSP 1 Score: 478.8 bits (1231), Expect = 6.4e-132
Identity = 238/274 (86.86%), Postives = 249/274 (90.88%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCCCD+DDDVEILRHL+PSP + SPP Q     P   D S A+LSPMNSHFFALSCRDI
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQ-----PPPADHSAAILSPMNSHFFALSCRDI 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFE LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVKDV+GKPSS SFWRDNC
Sbjct: 61  LRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNC 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNPN+LIN
Sbjct: 121 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLIN 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSMMVDD 240
           SICYIEMDAIAKREVA LYLDGIP T HLYGK T + GMSSVQV KRVLHSLSRSMMVDD
Sbjct: 181 SICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDD 240

Query: 241 ETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           ETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Sbjct: 241 ETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA 269

BLAST of Cp4.1LG07g09110 vs. NCBI nr
Match: gi|1009117267|ref|XP_015875224.1| (PREDICTED: F-box protein At1g55000-like [Ziziphus jujuba])

HSP 1 Score: 359.0 bits (920), Expect = 7.4e-96
Identity = 181/277 (65.34%), Postives = 219/277 (79.06%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCC DED+D +IL+HL+PS + +S          +  D S  V+SPMNSHF  L+CRD 
Sbjct: 1   MGCCGDEDED-DILKHLNPSISTESLTPNLHHSSSSDSDVSGDVISPMNSHFSGLTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LR+IFEKL IPDLAR+SCV R WNSVASD++I++ AFKAPWK+K+VIG+P SGSFWRDN 
Sbjct: 61  LRIIFEKLPIPDLARASCVCRTWNSVASDRDILTKAFKAPWKLKEVIGEPLSGSFWRDNT 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           +GKFAISHRI+RGD++A LAVKYSVQV+DIKRLNNMMS+HGIYSRERLLIPI NP ILI 
Sbjct: 121 IGKFAISHRIVRGDTVARLAVKYSVQVMDIKRLNNMMSEHGIYSRERLLIPISNPEILIG 180

Query: 181 SICYIEMDAIAKREVATLYLDG----IPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSM 240
            ICY+E+D  AKREVA LYLDG    + TT  +  + T D GM      KR++HSL RSM
Sbjct: 181 GICYVELDTYAKREVAVLYLDGSGPDLKTTSSMIRRTTSDLGM------KRIIHSLKRSM 240

Query: 241 MVDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGM 274
            VDD TAQYYLSIS+GDPRAAL+EF+ED+RWE+ +G+
Sbjct: 241 HVDDGTAQYYLSISNGDPRAALSEFSEDLRWEKQVGL 270

BLAST of Cp4.1LG07g09110 vs. NCBI nr
Match: gi|1009117244|ref|XP_015875212.1| (PREDICTED: F-box protein At1g55000 [Ziziphus jujuba])

HSP 1 Score: 357.1 bits (915), Expect = 2.8e-95
Identity = 180/277 (64.98%), Postives = 219/277 (79.06%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCC DED+D +IL+HL+PS + +S          +  D S  V+SPMNSHF  L+CRD 
Sbjct: 1   MGCCGDEDED-DILKHLNPSISTESLTPNLHHSSSSDSDVSGDVISPMNSHFSGLTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LR+IFEKL IPDLAR+SCV R W+SVASD++I++ AFKAPWK+K+VIG+P SGSFWRDN 
Sbjct: 61  LRIIFEKLPIPDLARASCVCRTWSSVASDRDILTKAFKAPWKLKEVIGEPLSGSFWRDNT 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           +GKFAISHRI+RGD++A LAVKYSVQV+DIKRLNNMMS+HGIYSRERLLIPI NP ILI 
Sbjct: 121 IGKFAISHRIVRGDTVARLAVKYSVQVMDIKRLNNMMSEHGIYSRERLLIPISNPEILIG 180

Query: 181 SICYIEMDAIAKREVATLYLDG----IPTTHHLYGKETDDHGMSSVQVKKRVLHSLSRSM 240
            ICY+E+D  AKREVA LYLDG    + TT  +  + T D GM      KR++HSL RSM
Sbjct: 181 GICYVELDTYAKREVAVLYLDGSGPDLKTTSSMIRRTTSDLGM------KRIIHSLKRSM 240

Query: 241 MVDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGM 274
            VDD TAQYYLSIS+GDPRAAL+EF+ED+RWE+ +G+
Sbjct: 241 HVDDGTAQYYLSISNGDPRAALSEFSEDLRWEKQVGL 270

BLAST of Cp4.1LG07g09110 vs. NCBI nr
Match: gi|645222154|ref|XP_008246459.1| (PREDICTED: F-box protein At1g55000 [Prunus mume])

HSP 1 Score: 356.7 bits (914), Expect = 3.7e-95
Identity = 176/277 (63.54%), Postives = 213/277 (76.90%), Query Frame = 1

Query: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQLQQQPTLPDSSTAVLSPMNSHFFALSCRDI 60
           MGCC DE++D +IL  L+P+ T +            + D S + +SPMNSHF AL+CRD 
Sbjct: 1   MGCCGDEENDDDILNPLNPTTTTE------------ILDFSDSTISPMNSHFSALTCRDT 60

Query: 61  LRLIFEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNC 120
           LRLIFEKL IPDLARSSCV R+WNSVASDQEIV+ AFKAPW +K +IGKP+SG+FWRDN 
Sbjct: 61  LRLIFEKLPIPDLARSSCVCRVWNSVASDQEIVTRAFKAPWNLKHIIGKPASGNFWRDNS 120

Query: 121 LGKFAISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILIN 180
           LGKFAISHRI+RGDS+ASLAVKYSVQV+DIKRLNN MS+HGIYSRERLLIPI NP +L+ 
Sbjct: 121 LGKFAISHRIVRGDSIASLAVKYSVQVMDIKRLNNTMSEHGIYSRERLLIPISNPEMLLQ 180

Query: 181 SICYIEMDAIAKREVATLYLDGIPTTHHLY---GKETDDHGMSSVQVKKRVLHSLSRSMM 240
           + CY+E+D  AKREVA LYLDG P  H         T     + +Q KKRV+ SL RSM 
Sbjct: 181 ATCYVEVDTCAKREVAVLYLDGGPELHKTTSNGSSSTSSCSATDLQSKKRVIESLRRSMQ 240

Query: 241 VDDETAQYYLSISDGDPRAALTEFAEDIRWERHMGMA 275
           VDD TA YYL+I+DGDPRAA+++F++D+RWE H+G A
Sbjct: 241 VDDATAHYYLTIADGDPRAAISQFSQDLRWETHLGFA 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FB60_ARATH4.2e-7560.91F-box protein At1g55000 OS=Arabidopsis thaliana GN=At1g55000 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LFS6_CUCSA4.5e-13286.86Uncharacterized protein OS=Cucumis sativus GN=Csa_2G022840 PE=4 SV=1[more]
M5WCC8_PRUPE4.4e-9563.18Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010076mg PE=4 SV=1[more]
W9SEY0_9ROSA4.8e-9463.50F-box protein OS=Morus notabilis GN=L484_000452 PE=4 SV=1[more]
A0A061F3R2_THECC4.5e-9265.22Peptidoglycan-binding LysM domain-containing protein isoform 1 OS=Theobroma caca... [more]
A0A0D2S5A1_GOSRA2.5e-9064.13Uncharacterized protein OS=Gossypium raimondii GN=B456_004G241900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G55000.12.4e-7660.91 peptidoglycan-binding LysM domain-containing protein[more]
AT5G08200.16.8e-0740.00 peptidoglycan-binding LysM domain-containing protein[more]
AT5G23130.15.8e-0641.27 Peptidoglycan-binding LysM domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|659070321|ref|XP_008454537.1|3.8e-13287.23PREDICTED: F-box protein At1g55000 [Cucumis melo][more]
gi|449442811|ref|XP_004139174.1|6.4e-13286.86PREDICTED: F-box protein At1g55000 [Cucumis sativus][more]
gi|1009117267|ref|XP_015875224.1|7.4e-9665.34PREDICTED: F-box protein At1g55000-like [Ziziphus jujuba][more]
gi|1009117244|ref|XP_015875212.1|2.8e-9564.98PREDICTED: F-box protein At1g55000 [Ziziphus jujuba][more]
gi|645222154|ref|XP_008246459.1|3.7e-9563.54PREDICTED: F-box protein At1g55000 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR018392LysM_dom
IPR001810F-box_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g09110.1Cp4.1LG07g09110.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 59..90
score: 1.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 59..118
score: 1.2
IPR018392LysM domainGENE3DG3DSA:3.10.350.10coord: 126..171
score: 3.
IPR018392LysM domainPFAMPF01476LysMcoord: 128..171
score: 3.
IPR018392LysM domainunknownSSF54106LysM domaincoord: 127..171
score: 2.4
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 58..91
score: 5.
NoneNo IPR availablePANTHERPTHR20932LOC443603 PROTEIN-RELATEDcoord: 1..269
score: 2.6E
NoneNo IPR availablePANTHERPTHR20932:SF9SUBFAMILY NOT NAMEDcoord: 1..269
score: 2.6E