Cp4.1LG07g07450 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07450
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranscription factor/transcription regulator
LocationCp4.1LG07 : 6426606 .. 6427028 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAATTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACCGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTTTCTCTCTCCAAACGGTGAAATTTTCTCAAGAAAATTTAGAGAGAGAACACGAAGAACACGAAGAACGCAAAGAACCAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCAGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

mRNA sequence

ATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAATTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACCGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTTTCTCTCTCCAAACGGTGAAATTTTCTCAAGAAAATTTAGAGAGAGAACACGAAGAACACGAAGAACGCAAAGAACCAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCAGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

Coding sequence (CDS)

ATGACATCTTTACCCAAAATCTCTCATCATCATCAACAACATCAAGAACAAAATTTTCAGAAGCTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAACCGAGTTTTCATGGGGCAATGCTCTTAAAAAGAAGCTTCTTCAAAGAGAAGATGGCAATGGGAGTAATGGGTTTGGTTTCTCTCTCCAAACGGTGAAATTTTCTCAAGAAAATTTAGAGAGAGAACACGAAGAACACGAAGAACGCAAAGAACCAAAGATAGAAAATGGGCTGATGAAGCTGAGAAAAATCGTCCCAGGTGGTTCAAATGGAGAATTGGAAGAAGATGATTTGTTCAAACAAACTGAGAGTTATATAAAATGTCTTGAGTTGCAGGTCAATGTTCTTAGATGTTTGGTTGATACAAACACAAATTAA

Protein sequence

MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNTN
Homology
[Close]
BLAST of Cp4.1LG07g07450 vs. Swiss-Prot
Match: Y4318_ARATH (Uncharacterized protein At4g30180 OS=Arabidopsis thaliana GN=At4g30180 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 1 

Query: 20  QKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHE 79
           ++ VK EVDMA+A SA EF+W   L +KL      N +     S   ++     LER  +
Sbjct: 48  KQTVKHEVDMALALSAQEFAWSRFLLQKL--SSSSNPTTTTSSSSDGIRI----LERPDK 107

Query: 80  EHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNT 139
           E    +E  IE  L +L+K++PGG   E+  +++  +  +YIKCLELQ   L+ +V  +T
Sbjct: 108 E-GGNEEGGIEERLRELKKLLPGGE--EMNVEEMLSEIGNYIKCLELQTIALKSIVQDST 158

[Close]
BLAST of Cp4.1LG07g07450 vs. Swiss-Prot
Match: IBH1_ARATH (Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.5e-07
Identity = 38/110 (34.55%), Postives = 55/110 (50.00%), Query Frame = 1 

Query: 27  VDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHEEHEERKE 86
           V MA A   +   W  AL    L+R D + +    FS +  K S +           ++ 
Sbjct: 54  VSMARAAGGSSRLWSRAL----LRRADKDDNKIVRFSRRKWKISSKR------RRSNQRA 113

Query: 87  PKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVD 137
           P +E    +LR +VPGG  G +E   L ++T  YIKCL +QV V++CLVD
Sbjct: 114 PVVEEAAERLRNLVPGG--GGMETSKLMEETAHYIKCLSMQVKVMQCLVD 151

[Close]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match: A0A0A0LJA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-41
Identity = 108/153 (70.59%), Postives = 121/153 (79.08%), Query Frame = 1 

Query: 1   MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED---GNGS 60
           MTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+
Sbjct: 34  MTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGN 93

Query: 61  -NGFGFSLQTV-KFSQENLEREHEEH----EERKEPKIENGLMKLRKIVPGGSN----GE 120
            NGF FS+QTV K SQENL  E E+H    EE +E ++ENGLMKLRKI+PGG N    G 
Sbjct: 94  ENGFDFSVQTVKKTSQENLGNEEEDHHHEEEEEEEEEMENGLMKLRKIIPGGDNFSIGGN 153

Query: 121 L-EEDDLFKQTESYIKCLELQVNVLRCLVDTNT 140
           L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 154 LDEEDDLLKQTESYVKCLELQVNVLRGLVETNT 183

[Close]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match: A0A0B2Q1X5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_026605 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-11
Identity = 53/164 (32.32%), Postives = 83/164 (50.61%), Query Frame = 1 

Query: 8   SHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGN---GSNGFGFSL 67
           S  H  H + N Q +VK+EVDMAM  SA  F+W NAL  KL QR+  N    +  FG   
Sbjct: 46  SDQHSGHCDDNIQNVVKYEVDMAMVHSAQGFAWSNALSVKL-QRDRVNVDCDTTSFGEGS 105

Query: 68  QTVKFSQENLE-----------------------------REHEEHEERKEPKIENGLMK 127
            + +   +N E                             RE ++ ++  E ++ NG +K
Sbjct: 106 SSSRVCGQNCEMVPLDNFPSNPSLKSNNKCKEMPEMKRGLREDDDGDDEDEDEVINGQLK 165

Query: 128 -LRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTN 139
            LR+++PGG   E+  + +  + +SY+ CL++QVN+LRCL +T+
Sbjct: 166 SLRRLMPGGE--EMCSEQMVTELQSYVSCLQMQVNILRCLAETH 206

[Close]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match: A0A0B0N7Y3_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_35148 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.4e-11
Identity = 45/123 (36.59%), Postives = 67/123 (54.47%), Query Frame = 1 

Query: 16  EQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLE 75
           ++  +K+V++EVDMA+A SA  F+W  ALK KL    + +   G G      K      +
Sbjct: 62  DEETKKMVRYEVDMALALSAKGFAWSRALKHKLRLNYNDDDRVGDGHGEPVTK----KPK 121

Query: 76  REHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLV 135
            EHEE E          +M LRK++PGG     +++ L  +  SY+ CLELQVN+LR ++
Sbjct: 122 TEHEEEER---------MMCLRKLIPGGKEMMADDEMLLSELGSYVSCLELQVNILRSML 171

Query: 136 DTN 139
             N
Sbjct: 182 QNN 171

[Close]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match: A0A087HDS3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G353700 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 9.9e-11
Identity = 50/128 (39.06%), Postives = 74/128 (57.81%), Query Frame = 1 

Query: 13  QHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQE 72
           Q  +Q+F++ VK EVDMA+A SA EF+W   L+ KLL             S +   FS +
Sbjct: 48  QINDQSFEQTVKHEVDMALALSAQEFAWSRFLQHKLLSS-----------SHEDPSFSSK 107

Query: 73  NLERE--HEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNV 132
            +ER    E+ EE +  +++N L +L+K++PGG   ++EE  +  +  SYI CLELQ+ V
Sbjct: 108 VIERSIYKEDSEEEEGVELKNRLKELQKLLPGGEQMDMEE--MLSEVGSYIVCLELQMIV 162

Query: 133 LRCLVDTN 139
           L  LV  N
Sbjct: 168 LNSLVHDN 162

[Close]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match: A0A0D2U6H5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G246700 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-10
Identity = 45/125 (36.00%), Postives = 70/125 (56.00%), Query Frame = 1 

Query: 16  EQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLL--QREDGNGSNGFGFSLQTVKFSQEN 75
           ++  +K+V++EVDMA+A SA  F+W  ALK KL    ++D    +G G         +  
Sbjct: 84  DEETKKMVRYEVDMALALSAKGFAWSRALKHKLRLNYKDDDRVGDGHG---------EPV 143

Query: 76  LEREHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRC 135
            ++   EHEE      E  +M LRK++PGG     +++ L  +  SY+ CLELQVN+LR 
Sbjct: 144 TKKPKTEHEE------EERMMCLRKLIPGGKEMMADDEMLLSELGSYVSCLELQVNILRS 193

Query: 136 LVDTN 139
           ++  N
Sbjct: 204 MLQNN 193

[Close]
BLAST of Cp4.1LG07g07450 vs. TAIR10
Match: AT2G18969.1 (AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1))

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-12
Identity = 43/127 (33.86%), Postives = 74/127 (58.27%), Query Frame = 1 

Query: 16  EQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQR--EDGNGSNGFGFSLQTVKFSQEN 75
           +Q+ ++ VK EVDMA A SA EF+W   L++KLL    +D   ++     +      ++ 
Sbjct: 51  KQSLEQTVKHEVDMAFALSAQEFAWSRFLQQKLLSSPYDDPISTSSSPSEILERSSKRQG 110

Query: 76  LEREHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRC 135
            E+  +  EE +  +I+  L +L+K++PGG   E+  +++  +  SYI CLELQ+ VL+ 
Sbjct: 111 GEKHQDSDEEEEGGEIKKRLKELQKLLPGGE--EMNMEEILSEIGSYIVCLELQMIVLKS 170

Query: 136 LVDTNTN 141
           +V  NT+
Sbjct: 171 IVQDNTS 175

[Close]
BLAST of Cp4.1LG07g07450 vs. TAIR10
Match: AT4G30180.1 (AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators)

HSP 1 Score: 60.5 bits (145), Expect = 9.8e-10
Identity = 43/120 (35.83%), Postives = 66/120 (55.00%), Query Frame = 1 

Query: 20  QKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHE 79
           ++ VK EVDMA+A SA EF+W   L +KL      N +     S   ++     LER  +
Sbjct: 48  KQTVKHEVDMALALSAQEFAWSRFLLQKL--SSSSNPTTTTSSSSDGIRI----LERPDK 107

Query: 80  EHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVDTNT 139
           E    +E  IE  L +L+K++PGG   E+  +++  +  +YIKCLELQ   L+ +V  +T
Sbjct: 108 E-GGNEEGGIEERLRELKKLLPGGE--EMNVEEMLSEIGNYIKCLELQTIALKSIVQDST 158

[Close]
BLAST of Cp4.1LG07g07450 vs. TAIR10
Match: AT2G43060.1 (AT2G43060.1 ILI1 binding bHLH 1)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 38/110 (34.55%), Postives = 55/110 (50.00%), Query Frame = 1 

Query: 27  VDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGFSLQTVKFSQENLEREHEEHEERKE 86
           V MA A   +   W  AL    L+R D + +    FS +  K S +           ++ 
Sbjct: 54  VSMARAAGGSSRLWSRAL----LRRADKDDNKIVRFSRRKWKISSKR------RRSNQRA 113

Query: 87  PKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIKCLELQVNVLRCLVD 137
           P +E    +LR +VPGG  G +E   L ++T  YIKCL +QV V++CLVD
Sbjct: 114 PVVEEAAERLRNLVPGG--GGMETSKLMEETAHYIKCLSMQVKVMQCLVD 151

[Close]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match: gi|778667500|ref|XP_011648935.1| (PREDICTED: uncharacterized protein At4g30180 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 108/153 (70.59%), Postives = 121/153 (79.08%), Query Frame = 1 

Query: 1   MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED---GNGS 60
           MTSL KISH   Q Q+QNF+KLVKFEVDMAMAQSA+EFSWG ALKKKLLQR+    GNG+
Sbjct: 34  MTSLVKISH---QQQQQNFRKLVKFEVDMAMAQSASEFSWGIALKKKLLQRDQQVLGNGN 93

Query: 61  -NGFGFSLQTV-KFSQENLEREHEEH----EERKEPKIENGLMKLRKIVPGGSN----GE 120
            NGF FS+QTV K SQENL  E E+H    EE +E ++ENGLMKLRKI+PGG N    G 
Sbjct: 94  ENGFDFSVQTVKKTSQENLGNEEEDHHHEEEEEEEEEMENGLMKLRKIIPGGDNFSIGGN 153

Query: 121 L-EEDDLFKQTESYIKCLELQVNVLRCLVDTNT 140
           L EEDDL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 154 LDEEDDLLKQTESYVKCLELQVNVLRGLVETNT 183

[Close]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match: gi|659069736|ref|XP_008451551.1| (PREDICTED: uncharacterized protein At4g30180 isoform X2 [Cucumis melo])

HSP 1 Score: 175.3 bits (443), Expect = 7.7e-41
Identity = 105/157 (66.88%), Postives = 120/157 (76.43%), Query Frame = 1 

Query: 1   MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED-----GN 60
           MTSL KISH   Q Q+QNFQKLV+FEVDMAMAQSA+EFSWG ALKKKLLQR+D     GN
Sbjct: 34  MTSLVKISH---QQQQQNFQKLVRFEVDMAMAQSASEFSWGIALKKKLLQRDDQQEVLGN 93

Query: 61  GS-NGFGFSLQTV-KFSQENLEREHEEH-----EERKEPKIENGLMKLRKIVPGGSNGEL 120
           GS NGF FSLQT+ K S +NL  E E+H     EE +E ++ENGLMKLRKI+PGG +  +
Sbjct: 94  GSENGFDFSLQTMKKISHKNLGNEEEDHHEDEEEEEEEEEMENGLMKLRKIIPGGDDFSI 153

Query: 121 ------EEDDLFKQTESYIKCLELQVNVLRCLVDTNT 140
                 EEDDL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 154 GGNNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT 187

[Close]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match: gi|659069734|ref|XP_008451543.1| (PREDICTED: uncharacterized protein At4g30180 isoform X1 [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 1.3e-40
Identity = 105/159 (66.04%), Postives = 120/159 (75.47%), Query Frame = 1 

Query: 1   MTSLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQRED-----GN 60
           MTSL KISH   Q Q+QNFQKLV+FEVDMAMAQSA+EFSWG ALKKKLLQR+D     GN
Sbjct: 34  MTSLVKISH---QQQQQNFQKLVRFEVDMAMAQSASEFSWGIALKKKLLQRDDQQEVLGN 93

Query: 61  GS-NGFGFSLQTV-KFSQENLEREHEEH-------EERKEPKIENGLMKLRKIVPGGSNG 120
           GS NGF FSLQT+ K S +NL  E E+H       EE +E ++ENGLMKLRKI+PGG + 
Sbjct: 94  GSENGFDFSLQTMKKISHKNLGNEEEDHHEDEEEEEEEEEEEMENGLMKLRKIIPGGDDF 153

Query: 121 EL------EEDDLFKQTESYIKCLELQVNVLRCLVDTNT 140
            +      EEDDL KQTESY+KCLELQVNVLR LV+TNT
Sbjct: 154 SIGGNNLDEEDDLLKQTESYVKCLELQVNVLRGLVETNT 189

[Close]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match: gi|1012002547|ref|XP_015935237.1| (PREDICTED: uncharacterized protein At4g30180 [Arachis duranensis])

HSP 1 Score: 80.5 bits (197), Expect = 2.6e-12
Identity = 52/133 (39.10%), Postives = 80/133 (60.15%), Query Frame = 1 

Query: 3   SLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGF 62
           +L KI + +      +F K VK+EVDMAMA SA  F+W + LK KLLQR++         
Sbjct: 37  ALTKIKNQNTTTTSSDF-KNVKYEVDMAMAFSAEGFAWSHGLKLKLLQRDEDEAP----- 96

Query: 63  SLQTVKFSQENLEREHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIK 122
           ++ T K S     +   + +E    K+++ L  LRK++PGG   E+ ++++  + ESYI 
Sbjct: 97  TITTEKASSNPSLKTSSDEDE----KMKSELSSLRKLIPGGE--EIVDEEMVTELESYIS 156

Query: 123 CLELQVNVLRCLV 136
           CLE+QVNVL+CL+
Sbjct: 157 CLEMQVNVLQCLL 157

[Close]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match: gi|1021473913|ref|XP_016201464.1| (PREDICTED: uncharacterized protein At4g30180 [Arachis ipaensis])

HSP 1 Score: 79.0 bits (193), Expect = 7.5e-12
Identity = 52/133 (39.10%), Postives = 78/133 (58.65%), Query Frame = 1 

Query: 3   SLPKISHHHQQHQEQNFQKLVKFEVDMAMAQSATEFSWGNALKKKLLQREDGNGSNGFGF 62
           +L KI + +      +F K VK+EVDMAMA SA  F+W + LK KLLQR++         
Sbjct: 37  ALTKIKNQNSTTTSSDF-KNVKYEVDMAMAFSAQGFAWSHGLKLKLLQRDEDEAPT---- 96

Query: 63  SLQTVKFSQENLEREHEEHEERKEPKIENGLMKLRKIVPGGSNGELEEDDLFKQTESYIK 122
              T K S     +   + +E    K+++ L  LRK++PGG   E+ ++++  + ESYI 
Sbjct: 97  --TTEKASSNPSLKTSSDEDE----KMKSQLSSLRKLIPGGE--EIVDEEMVTELESYIS 156

Query: 123 CLELQVNVLRCLV 136
           CLE+QVNVL+CL+
Sbjct: 157 CLEMQVNVLQCLL 156

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4318_ARATH1.7e-0835.83Uncharacterized protein At4g30180 OS=Arabidopsis thaliana GN=At4g30180 PE=2 SV=1[more]
IBH1_ARATH2.5e-0734.55Transcription factor IBH1 OS=Arabidopsis thaliana GN=IBH1 PE=1 SV=1[more]
BLAST of Cp4.1LG07g07450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJA7_CUCSA1.1e-4170.59Uncharacterized protein OS=Cucumis sativus GN=Csa_2G060350 PE=4 SV=1[more]
A0A0B2Q1X5_GLYSO2.6e-1132.32Uncharacterized protein OS=Glycine soja GN=glysoja_026605 PE=4 SV=1[more]
A0A0B0N7Y3_GOSAR4.4e-1136.59Uncharacterized protein OS=Gossypium arboreum GN=F383_35148 PE=4 SV=1[more]
A0A087HDS3_ARAAL9.9e-1139.06Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G353700 PE=4 SV=1[more]
A0A0D2U6H5_GOSRA2.2e-1036.00Uncharacterized protein OS=Gossypium raimondii GN=B456_013G246700 PE=4 SV=1[more]
BLAST of Cp4.1LG07g07450 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G18969.11.2e-1233.86 BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi... [more]
AT4G30180.19.8e-1035.83 sequence-specific DNA binding transcription factors;transcription re... [more]
AT2G43060.11.4e-0834.55 ILI1 binding bHLH 1[more]
BLAST of Cp4.1LG07g07450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778667500|ref|XP_011648935.1|1.6e-4170.59PREDICTED: uncharacterized protein At4g30180 [Cucumis sativus][more]
gi|659069736|ref|XP_008451551.1|7.7e-4166.88PREDICTED: uncharacterized protein At4g30180 isoform X2 [Cucumis melo][more]
gi|659069734|ref|XP_008451543.1|1.3e-4066.04PREDICTED: uncharacterized protein At4g30180 isoform X1 [Cucumis melo][more]
gi|1012002547|ref|XP_015935237.1|2.6e-1239.10PREDICTED: uncharacterized protein At4g30180 [Arachis duranensis][more]
gi|1021473913|ref|XP_016201464.1|7.5e-1239.10PREDICTED: uncharacterized protein At4g30180 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07450.1Cp4.1LG07g07450.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 76..135
score: 1.4
NoneNo IPR availableunknownCoilCoilcoord: 64..91
scor
NoneNo IPR availablePANTHERPTHR33124FAMILY NOT NAMEDcoord: 6..136
score: 2.6
NoneNo IPR availablePANTHERPTHR33124:SF4SUBFAMILY NOT NAMEDcoord: 6..136
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g07450Cucsa.089190Cucumber (Gy14) v1cgycpeB0179
Cp4.1LG07g07450CmaCh12G008920Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g07450CmoCh05G007320Cucurbita moschata (Rifu)cmocpeB743
Cp4.1LG07g07450CmoCh12G009000Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g07450Cla022808Watermelon (97103) v1cpewmB814
Cp4.1LG07g07450Csa2G060350Cucumber (Chinese Long) v2cpecuB811
Cp4.1LG07g07450ClCG11G011990Watermelon (Charleston Gray)cpewcgB723
Cp4.1LG07g07450CSPI02G06190Wild cucumber (PI 183967)cpecpiB812
Cp4.1LG07g07450Lsi11G007710Bottle gourd (USVL1VR-Ls)cpelsiB654
Cp4.1LG07g07450CsaV3_2G008530Cucumber (Chinese Long) v3cpecucB1005
Cp4.1LG07g07450CsGy2G006340Cucumber (Gy14) v2cgybcpeB261
Cp4.1LG07g07450Carg08385Silver-seed gourdcarcpeB0089
Cp4.1LG07g07450Carg24212Silver-seed gourdcarcpeB1382
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g07450Cp4.1LG11g06340Cucurbita pepo (Zucchini)cpecpeB150
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g07450Cucurbita pepo (Zucchini)cpecpeB142
Cp4.1LG07g07450Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG07g07450Cucurbita maxima (Rimu)cmacpeB163
Cp4.1LG07g07450Cucurbita maxima (Rimu)cmacpeB790
Cp4.1LG07g07450Cucurbita moschata (Rifu)cmocpeB140
Cp4.1LG07g07450Wild cucumber (PI 183967)cpecpiB807
Cp4.1LG07g07450Cucumber (Chinese Long) v2cpecuB807
Cp4.1LG07g07450Bottle gourd (USVL1VR-Ls)cpelsiB681
Cp4.1LG07g07450Watermelon (Charleston Gray)cpewcgB745
Cp4.1LG07g07450Watermelon (97103) v1cpewmB820
Cp4.1LG07g07450Melon (DHL92) v3.5.1cpemeB749
Cp4.1LG07g07450Melon (DHL92) v3.5.1cpemeB777
Cp4.1LG07g07450Cucumber (Gy14) v2cgybcpeB145
Cp4.1LG07g07450Melon (DHL92) v3.6.1cpemedB888
Cp4.1LG07g07450Melon (DHL92) v3.6.1cpemedB913
Cp4.1LG07g07450Silver-seed gourdcarcpeB0848
Cp4.1LG07g07450Cucumber (Chinese Long) v3cpecucB0999
Cp4.1LG07g07450Wax gourdcpewgoB1018
Cp4.1LG07g07450Wax gourdcpewgoB1071