Cp4.1LG07g03410 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG07g03410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CONSTANS-like protein
Location	Cp4.1LG07 : 2164576 .. 2167022 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTATTTAAGGTATTAATATTAAAAAGAGTAAATGAAAGAAAATGCCTGTAAATTATAGGGGGGTTGGGGAGGAGGGACACGTGTCAAAGTCTAGTGTTCGTGCGGTGAAACGACGCCGTATCACCTTATTCTTTATTATCCCTAAAGTAACGATTTTGAATTATCTTAAATTAAATTAATAAAGTATATTTAAACCTACCTAATTCTCAAAAGGGCTGAGTGAGAAGTGGGCTTGAGCCCATACAAAATGAAGCCCAACAATGAAAGTTCATGTTAAAAATGGGCCATGAGCCCATCAAAATGAAGCCCAACAATTAAAGTTCATGTTAAAAATGGGCCATGAGCCCATCAAGATGAAGCCCAACAATTAAAGTTCATGTTAAAAATGGGCCATGACCAACGAACAACCAGAATTGGGCCGGTTGTTTGGGCCCAACAGAAGTCCCTAGAAAAATCCTTTCAATATTCACTTTCTGCGGTTTATGTTAATGTTTTATTAATTAGTTACTAAATGAAAATTAGGTATTTTTTACCATTATTTATGTATTTATTTATTTATTTTTCCGTTCAGTCAAGGCGATAAATTCTTTTGGTTTCTATGGCTAAGCCCCGCCCACGTGTTTCTCTCCCATTCGTCCATGGCTGATTTCCTTGGTCCCACAGGATAGACTCTCACGCGCATGATGAACAAAAGGAATAGCATAGGGCTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGATTACATACCATTTTCTGCAGTTTTCCGCCATTGAAGTATGGCTTCAAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGTAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCTGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCCAATGTCAACACTGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACTTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTAAACGATCGTAGCTTCGGCATCGACTTCCCCTGCGCTAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTAAGTCATCGCATTTCTCTAATTCCTCGTCCAATTAGTTTCTCATCCAAAATCAAAATCCCGCACCTGTAAGATGAATTGATTTAACCACAACAATCTCACCTCTCACCTATTCTTCATGACTTTCAGGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAACACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGACGAGACCACGAATCAAGGGACGATTCGCCAAACGGACGGATATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAAGTTTGAATATTTAATAAAATAATAATTAATTAAAAAATAGTTCGTGTAAATAGGAAGGAAGAAAAATAGCTGGGGCAGTTGATCAACGAANTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAGAAAATCTATGGGAGTTTGGTCAAAAAGGTTTTCGAAATCCCAATTTTCCTTAATTTTTAATTTTAGATATTGGGATTTTGTCTTATCATTTTATGAAATTTTATTGGTGAGCTGAATTAGCTTCCTCTTTGGTTTGGATATTTTATTTAATTGTAGTTTGCAATTTCCTCACCTTGTGCGGAATTCTACAAAATAATTTAATTATATCACAAGTTAATCCTAATAGTTGTCGATTGAAACGAAAATAGCACCAACGCCACTAGTAGATATTGTTCACTTTAATTGTTACATCATGATTTTAAAACACGTAAGTGGTCTAGTAGATATTGTCCGCTTTTGCCGTTACATCATGATATTTTAAAACACGTAAGTGGTCTAGTAGATATTGTCCGCTTTAACCGTTACATCAT

mRNA sequence

TTTTATTTAAGGTATTAATATTAAAAAGAGTAAATGAAAGAAAATGCCTGTAAATTATAGGGGGGTTGGGGAGGAGGGACACGTGTCAAAGTCTAGTGTTCGTGCGGTGAAACGACGCCGTATCACCTTATTCTTTATTATCCCTAAAGTAACGATTTTGAATTATCTTAAATTAAATTAATAAAGTATATTTAAACCTACCTAATTCTCAAAAGGGCTGAGTGAGAAGTGGGCTTGAGCCCATACAAAATGAAGCCCAACAATGAAAGTTCATGTTAAAAATGGGCCATGAGCCCATCAAAATGAAGCCCAACAATTAAAGTTCATGTTAAAAATGGGCCATGAGCCCATCAAGATGAAGCCCAACAATTAAAGTTCATGTTAAAAATGGGCCATGACCAACGAACAACCAGAATTGGGCCGGTTGTTTGGGCCCAACAGAAGTCCCTAGAAAAATCCTTTCAATATTCACTTTCTGCGGTTTATGTTAATGTTTTATTAATTAGTTACTAAATGAAAATTAGGTATTTTTTACCATTATTTATGTATTTATTTATTTATTTTTCCGTTCAGTCAAGGCGATAAATTCTTTTGGTTTCTATGGCTAAGCCCCGCCCACGTGTTTCTCTCCCATTCGTCCATGGCTGATTTCCTTGGTCCCACAGGATAGACTCTCACGCGCATGATGAACAAAAGGAATAGCATAGGGCTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGATTACATACCATTTTCTGCAGTTTTCCGCCATTGAAGTATGGCTTCAAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGTAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCTGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCCAATGTCAACACTGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACTTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTAAACGATCGTAGCTTCGGCATCGACTTCCCCTGCGCTAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAACACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGACGAGACCACGAATCAAGGGACGATTCGCCAAACGGACGGATATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAAGTTTGAATATTTAATAAAATAATAATTAATTAAAAAATAGTTCGTGTAAATAGGAAGGAAGAAAAATAGCTGGGGCAGTTGATCAACGAANTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAAGAAAATCTATGGGAGTTTGGTCAAAAAGGTTTTCGAAATCCCAATTTTCCTTAATTTTTAATTTTAGATATTGGGATTTTGTCTTATCATTTTATGAAATTTTATTGGTGAGCTGAATTAGCTTCCTCTTTGGTTTGGATATTTTATTTAATTGTAGTTTGCAATTTCCTCACCTTGTGCGGAATTCTACAAAATAATTTAATTATATCACAAGTTAATCCTAATAGTTGTCGATTGAAACGAAAATAGCACCAACGCCACTAGTAGATATTGTTCACTTTAATTGTTACATCATGATTTTAAAACACGTAAGTGGTCTAGTAGATATTGTCCGCTTTTGCCGTTACATCATGATATTTTAAAACACGTAAGTGGTCTAGTAGATATTGTCCGCTTTAACCGTTACATCAT

Coding sequence (CDS)

ATGGCTTCAAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGTAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCTGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCCAATGTCAACACTGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACTTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTAAACGATCGTAGCTTCGGCATCGACTTCCCCTGCGCTAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAACACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGACGAGACCACGAATCAAGGGACGATTCGCCAAACGGACGGATATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAA

Protein sequence

MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSNVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEADRVSGYGVVPSF

Homology

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BLAST of Cp4.1LG07g03410 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 401.4 bits (1030), Expect = 9.9e-111
Identity = 223/366 (60.93%), Postives = 265/366 (72.40%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A A L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCD DIHSANPLARRHERVPVTPFYDS +SD S+      A+NFLDD YF
Sbjct: 61  CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 120

Query: 121 SNVNTDAA---EEAEAASWLLPNPNPK------------------PIENTDLNSG-KLEF 180
           S+++ + +   EE EAASWLL  PNPK                  P ++ ++N+G +  F
Sbjct: 121 SDIDGNGSREEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLF 180

Query: 181 LEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFP-CAKSF 240
            + DPYLDLDY  VDPK+E  E NSS  DGVVPV+++ V + +VN+  F +DF   +K F
Sbjct: 181 SDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKGF 240

Query: 241 PYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQ----ISPADRE 300
            Y      ISHSVSSSS+EVGVVP+G ++ ++S PY  P+T    P  Q    ++ A+RE
Sbjct: 241 TYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAERE 300

Query: 301 ARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEADRV------SGY 334
           ARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG+
Sbjct: 301 ARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGF 360

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BLAST of Cp4.1LG07g03410 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 1.9e-82
Identity = 186/337 (55.19%), Postives = 222/337 (65.88%), Query Frame = 1


Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCK  AATLFCRAD+AFLC  CD K+H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC+TCD DIHSANPL+RRHERVP+TPFYD+       A   ++++NF+D+    
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGP----AKSASSSVNFVDE---- 123

Query: 122 NVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEV-RE 181
               D  +    ASWLL     + IE T+L            + DLDY    PK+EV  E
Sbjct: 124 ----DGGD--VTASWLLAK---EGIEITNL------------FSDLDY----PKIEVTSE 183

Query: 182 HNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVV 241
            NSS  DGVVPVQ+K      +N+  F  D   +K     +N   I+ +VS+ +I+V +V
Sbjct: 184 ENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTIDVPLV 243

Query: 242 PEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAY 301
           PE       S   T   T +  P +Q+SPA+REARVLRYREKRKNRKFEKTIRYASRKAY
Sbjct: 244 PE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAY 294

Query: 302 AETRPRIKGRFAKRTDIEL----EADRVSGYGVVPSF 334
           AE RPRIKGRFAKRTD       +     G+GVVPSF
Sbjct: 304 AEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

[Close]

BLAST of Cp4.1LG07g03410 vs. Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 8.7e-75
Identity = 175/351 (49.86%), Postives = 222/351 (63.25%), Query Frame = 1


Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CK   A +FCR DSAFLC+ CD+++H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+DS+    +   K +A+  F      +
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFDSA---ETAVAKISASSTFGILGSST 137

Query: 122 NVNTDA----AEEAEAASWLLPNP--NPKPIE-NTDLNSGKLEFL--EMDPYLDLDYDRV 181
            V+  A    A++     WLLPN    P  IE  T+   G  +F+  + D  +D ++   
Sbjct: 138 TVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF--- 197

Query: 182 DPKLEVREHNSSAADGVVPVQSKGVDLS-SVNDRSFGIDFPCAKSFPYSYNPQSISHSVS 241
            P       N++  D +VPVQ+K   L  + ND  F IDF  +K   ++Y  QS+SHSVS
Sbjct: 198 -PNSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVS 257

Query: 242 SSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKT 301
           +SSIE GVVP+GNT   ++      ST  T    Q S  DREARVLRYREKRKNRKFEKT
Sbjct: 258 TSSIEYGVVPDGNTNNSVNRSTITSST--TGGDHQASSMDREARVLRYREKRKNRKFEKT 317

Query: 302 IRYASRKAYAETRPRIKGRFAKRTDIELEADRVS---------GYGVVPSF 334
           IRYASRKAYAE+RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 IRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

[Close]

BLAST of Cp4.1LG07g03410 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.4e-72
Identity = 165/351 (47.01%), Postives = 215/351 (61.25%), Query Frame = 1


Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSN 122
           ADAA+LC TCD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVR--- 182
              +  +EAEAASWLLPN       N   + G  EFL +  Y   D    D   + +   
Sbjct: 129 QEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQYQLDC 188

Query: 183 --EHNSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSS 242
                S   DGVVP+Q   SKG+     N   F +   C        +  S+SH V+ SS
Sbjct: 189 NVPQRSYGEDGVVPLQIEVSKGMYQEQQN---FQLSINCGSWGALRSSNGSLSHMVNVSS 248

Query: 243 IEVGVVPEGNTI-TEISNPYTKPST--ESTVPPLQ-ISPADREARVLRYREKRKNRKFEK 302
           +++GVVPE  T    +SNP +  +   +   PP Q +SP DREARVLRYREK+K RKFEK
Sbjct: 249 MDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEK 308

Query: 303 TIRYASRKAYAETRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
           TIRYASRKAYAE RPRIKGRFAK+ D++ EA++         +GYG+VPSF
Sbjct: 309 TIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

[Close]

BLAST of Cp4.1LG07g03410 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.6e-68
Identity = 169/357 (47.34%), Postives = 226/357 (63.31%), Query Frame = 1


Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++C ADSA+LC  CD++VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSN 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P   S+NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDL-DY-DRVDPKLEVRE 182
                    E ASWLLPNP  K I N   N+G L  +E   YLDL DY   +D + E  +
Sbjct: 133 ---------EVASWLLPNPG-KNIGNQ--NNGFLFGVE---YLDLVDYSSSMDNQFEDNQ 192

Query: 183 H----NSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNP-QSISHSVSS 242
           +     S   DGVVP+Q   S      S  +   GI++  +    Y+ N  + ++HS S 
Sbjct: 193 YTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASV 252

Query: 243 SSIEVGVVPEGNTITEISNPYTKPSTES----TVPPLQI----SPADREARVLRYREKRK 302
           SS+++ VVPE +T ++I+  + + + E+    + PP Q+    +P +REARVLRYREK+K
Sbjct: 253 SSMDISVVPE-STASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKK 312

Query: 303 NRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
            RKF+KTIRYASRKAYAE RPRIKGRFAKR + E EA+ +        +GYG+VPSF
Sbjct: 313 TRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

[Close]

BLAST of Cp4.1LG07g03410 vs. TrEMBL
Match: A0A0A0LSP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 9.2e-164
Identity = 294/337 (87.24%), Postives = 310/337 (91.99%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSL VKP+AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SNVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           S+V+ DAA    EEAEAASWLLPNPNPK IE++DLNSGK EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAETRPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

[Close]

BLAST of Cp4.1LG07g03410 vs. TrEMBL
Match: A0A0D3R2X2_GOSHE (CONSTANS-like 5 protein OS=Gossypium herbaceum subsp. africanum PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. TrEMBL
Match: A0A0D3R297_GOSHI (CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. TrEMBL
Match: A0A0D3R2U2_GOSTO (CONSTANS-like 5 protein OS=Gossypium tomentosum PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. TrEMBL
Match: A0A0B0PKX1_GOSAR (Zinc finger CONSTANS-LIKE 4-like protein OS=Gossypium arboreum GN=F383_09644 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.3e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 401.4 bits (1030), Expect = 5.6e-112
Identity = 223/366 (60.93%), Postives = 265/366 (72.40%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A A L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 45  MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCD DIHSANPLARRHERVPVTPFYDS +SD S+      A+NFLDD YF
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 164

Query: 121 SNVNTDAA---EEAEAASWLLPNPNPK------------------PIENTDLNSG-KLEF 180
           S+++ + +   EE EAASWLL  PNPK                  P ++ ++N+G +  F
Sbjct: 165 SDIDGNGSREEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLF 224

Query: 181 LEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFP-CAKSF 240
            + DPYLDLDY  VDPK+E  E NSS  DGVVPV+++ V + +VN+  F +DF   +K F
Sbjct: 225 SDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKGF 284

Query: 241 PYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQ----ISPADRE 300
            Y      ISHSVSSSS+EVGVVP+G ++ ++S PY  P+T    P  Q    ++ A+RE
Sbjct: 285 TYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAERE 344

Query: 301 ARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEADRV------SGY 334
           ARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG+
Sbjct: 345 ARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGF 404

[Close]

BLAST of Cp4.1LG07g03410 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83
Identity = 186/337 (55.19%), Postives = 222/337 (65.88%), Query Frame = 1


Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCK  AATLFCRAD+AFLC  CD K+H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC+TCD DIHSANPL+RRHERVP+TPFYD+       A   ++++NF+D+    
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGP----AKSASSSVNFVDE---- 123

Query: 122 NVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEV-RE 181
               D  +    ASWLL     + IE T+L            + DLDY    PK+EV  E
Sbjct: 124 ----DGGD--VTASWLLAK---EGIEITNL------------FSDLDY----PKIEVTSE 183

Query: 182 HNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVV 241
            NSS  DGVVPVQ+K      +N+  F  D   +K     +N   I+ +VS+ +I+V +V
Sbjct: 184 ENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTIDVPLV 243

Query: 242 PEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAY 301
           PE       S   T   T +  P +Q+SPA+REARVLRYREKRKNRKFEKTIRYASRKAY
Sbjct: 244 PE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAY 294

Query: 302 AETRPRIKGRFAKRTDIEL----EADRVSGYGVVPSF 334
           AE RPRIKGRFAKRTD       +     G+GVVPSF
Sbjct: 304 AEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

[Close]

BLAST of Cp4.1LG07g03410 vs. TAIR10
Match: AT5G57660.1 (AT5G57660.1 CONSTANS-like 5)

HSP 1 Score: 282.0 bits (720), Expect = 4.9e-76
Identity = 175/351 (49.86%), Postives = 222/351 (63.25%), Query Frame = 1


Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CK   A +FCR DSAFLC+ CD+++H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+DS+    +   K +A+  F      +
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFDSA---ETAVAKISASSTFGILGSST 137

Query: 122 NVNTDA----AEEAEAASWLLPNP--NPKPIE-NTDLNSGKLEFL--EMDPYLDLDYDRV 181
            V+  A    A++     WLLPN    P  IE  T+   G  +F+  + D  +D ++   
Sbjct: 138 TVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF--- 197

Query: 182 DPKLEVREHNSSAADGVVPVQSKGVDLS-SVNDRSFGIDFPCAKSFPYSYNPQSISHSVS 241
            P       N++  D +VPVQ+K   L  + ND  F IDF  +K   ++Y  QS+SHSVS
Sbjct: 198 -PNSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVS 257

Query: 242 SSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKT 301
           +SSIE GVVP+GNT   ++      ST  T    Q S  DREARVLRYREKRKNRKFEKT
Sbjct: 258 TSSIEYGVVPDGNTNNSVNRSTITSST--TGGDHQASSMDREARVLRYREKRKNRKFEKT 317

Query: 302 IRYASRKAYAETRPRIKGRFAKRTDIELEADRVS---------GYGVVPSF 334
           IRYASRKAYAE+RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 IRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

[Close]

BLAST of Cp4.1LG07g03410 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-73
Identity = 165/351 (47.01%), Postives = 215/351 (61.25%), Query Frame = 1


Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSN 122
           ADAA+LC TCD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVR--- 182
              +  +EAEAASWLLPN       N   + G  EFL +  Y   D    D   + +   
Sbjct: 129 QEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQYQLDC 188

Query: 183 --EHNSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSS 242
                S   DGVVP+Q   SKG+     N   F +   C        +  S+SH V+ SS
Sbjct: 189 NVPQRSYGEDGVVPLQIEVSKGMYQEQQN---FQLSINCGSWGALRSSNGSLSHMVNVSS 248

Query: 243 IEVGVVPEGNTI-TEISNPYTKPST--ESTVPPLQ-ISPADREARVLRYREKRKNRKFEK 302
           +++GVVPE  T    +SNP +  +   +   PP Q +SP DREARVLRYREK+K RKFEK
Sbjct: 249 MDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEK 308

Query: 303 TIRYASRKAYAETRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
           TIRYASRKAYAE RPRIKGRFAK+ D++ EA++         +GYG+VPSF
Sbjct: 309 TIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

[Close]

BLAST of Cp4.1LG07g03410 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 261.2 bits (666), Expect = 9.0e-70
Identity = 169/357 (47.34%), Postives = 226/357 (63.31%), Query Frame = 1


Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++C ADSA+LC  CD++VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSN 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P   S+NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDL-DY-DRVDPKLEVRE 182
                    E ASWLLPNP  K I N   N+G L  +E   YLDL DY   +D + E  +
Sbjct: 133 ---------EVASWLLPNPG-KNIGNQ--NNGFLFGVE---YLDLVDYSSSMDNQFEDNQ 192

Query: 183 H----NSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNP-QSISHSVSS 242
           +     S   DGVVP+Q   S      S  +   GI++  +    Y+ N  + ++HS S 
Sbjct: 193 YTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASV 252

Query: 243 SSIEVGVVPEGNTITEISNPYTKPSTES----TVPPLQI----SPADREARVLRYREKRK 302
           SS+++ VVPE +T ++I+  + + + E+    + PP Q+    +P +REARVLRYREK+K
Sbjct: 253 SSMDISVVPE-STASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKK 312

Query: 303 NRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
            RKF+KTIRYASRKAYAE RPRIKGRFAKR + E EA+ +        +GYG+VPSF
Sbjct: 313 TRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

[Close]

BLAST of Cp4.1LG07g03410 vs. NCBI nr
Match: gi|449441842|ref|XP_004138691.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus])

HSP 1 Score: 584.3 bits (1505), Expect = 1.3e-163
Identity = 294/337 (87.24%), Postives = 310/337 (91.99%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSL VKP+AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SNVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           S+V+ DAA    EEAEAASWLLPNPNPK IE++DLNSGK EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAETRPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

[Close]

BLAST of Cp4.1LG07g03410 vs. NCBI nr
Match: gi|659089027|ref|XP_008445288.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo])

HSP 1 Score: 583.2 bits (1502), Expect = 2.9e-163
Identity = 294/337 (87.24%), Postives = 309/337 (91.69%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSLAVKP AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLAVKPGAAINFLDDRYF 120

Query: 121 SNVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           S+V+ DAA    EEAEAASWLLPNPNPK IE++DLNS K EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSSKFEFPEMDPYLDLDYGHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAETRPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

[Close]

BLAST of Cp4.1LG07g03410 vs. NCBI nr
Match: gi|728845631|gb|KHG25074.1| (Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum])

HSP 1 Score: 484.2 bits (1245), Expect = 1.9e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. NCBI nr
Match: gi|765198897|gb|AJR28784.1| (CONSTANS-like 5 protein [Gossypium barbadense])

HSP 1 Score: 483.8 bits (1244), Expect = 2.4e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQMVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

[Close]

BLAST of Cp4.1LG07g03410 vs. NCBI nr
Match: gi|765198889|gb|AJR28780.1| (CONSTANS-like 5 protein [Gossypium hirsutum subsp. latifolium])

HSP 1 Score: 483.4 bits (1243), Expect = 3.2e-133
Identity = 250/338 (73.96%), Postives = 280/338 (82.84%), Query Frame = 1


Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SNVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           S+V+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHWFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAETRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

The following BLAST results are available for this feature:

BLAST of Cp4.1LG07g03410 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COL4_ARATH	9.9e-111	60.93	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2	[more]
COL3_ARATH	1.9e-82	55.19	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1	[more]
COL5_ARATH	8.7e-75	49.86	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2	[more]
COL1_ARATH	2.4e-72	47.01	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1	[more]
COL2_ARATH	1.6e-68	47.34	Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1	[more]

BLAST of Cp4.1LG07g03410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSP8_CUCSA	9.2e-164	87.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1	[more]
A0A0D3R2X2_GOSHE	1.3e-133	73.96	CONSTANS-like 5 protein OS=Gossypium herbaceum subsp. africanum PE=4 SV=1	[more]
A0A0D3R297_GOSHI	1.3e-133	73.96	CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1	[more]
A0A0D3R2U2_GOSTO	1.3e-133	73.96	CONSTANS-like 5 protein OS=Gossypium tomentosum PE=4 SV=1	[more]
A0A0B0PKX1_GOSAR	1.3e-133	73.96	Zinc finger CONSTANS-LIKE 4-like protein OS=Gossypium arboreum GN=F383_09644 PE=...	[more]

BLAST of Cp4.1LG07g03410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24930.1	5.6e-112	60.93	CONSTANS-like 4	[more]
AT2G24790.1	1.1e-83	55.19	CONSTANS-like 3	[more]
AT5G57660.1	4.9e-76	49.86	CONSTANS-like 5	[more]
AT5G15850.1	1.3e-73	47.01	CONSTANS-like 1	[more]
AT3G02380.1	9.0e-70	47.34	CONSTANS-like 2	[more]

BLAST of Cp4.1LG07g03410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441842\|ref\|XP_004138691.1\|	1.3e-163	87.24	PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus]	[more]
gi\|659089027\|ref\|XP_008445288.1\|	2.9e-163	87.24	PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo]	[more]
gi\|728845631\|gb\|KHG25074.1\|	1.9e-133	73.96	Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum]	[more]
gi\|765198897\|gb\|AJR28784.1\|	2.4e-133	73.96	CONSTANS-like 5 protein [Gossypium barbadense]	[more]
gi\|765198889\|gb\|AJR28780.1\|	3.2e-133	73.96	CONSTANS-like 5 protein [Gossypium hirsutum subsp. latifolium]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR010402	CCT_domain
IPR000315	Znf_B-box

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG07g03410.1	Cp4.1LG07g03410.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 46..91 score: 2.4E-6coord: 4..43 score: 3.
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 1..48 score: 3.0E-13coord: 49..91 score: 7.
IPR000315	B-box-type zinc finger	PROFILE	PS50119	ZF_BBOX	coord: 1..48 score: 10.438coord: 44..91 score: 10
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 272..314 score: 4.9
IPR010402	CCT domain	PROFILE	PS51017	CCT	coord: 272..314 score: 16
None	No IPR available	PANTHER	PTHR31319	FAMILY NOT NAMED	coord: 1..333 score: 1.9E
None	No IPR available	PANTHER	PTHR31319:SF6	SUBFAMILY NOT NAMED	coord: 1..333 score: 1.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG07g03410	Cucsa.163000	Cucumber (Gy14) v1	cgycpeB0444
Cp4.1LG07g03410	CmaCh12G003770	Cucurbita maxima (Rimu)	cmacpeB203
Cp4.1LG07g03410	CmaCh05G003380	Cucurbita maxima (Rimu)	cmacpeB797
Cp4.1LG07g03410	CmoCh05G003400	Cucurbita moschata (Rifu)	cmocpeB750
Cp4.1LG07g03410	CmoCh12G003290	Cucurbita moschata (Rifu)	cmocpeB174
Cp4.1LG07g03410	Cla022378	Watermelon (97103) v1	cpewmB782
Cp4.1LG07g03410	Csa2G383330	Cucumber (Chinese Long) v2	cpecuB810
Cp4.1LG07g03410	MELO3C011317	Melon (DHL92) v3.5.1	cpemeB761
Cp4.1LG07g03410	ClCG08G013860	Watermelon (Charleston Gray)	cpewcgB748
Cp4.1LG07g03410	CSPI02G24090	Wild cucumber (PI 183967)	cpecpiB811
Cp4.1LG07g03410	Lsi08G012660	Bottle gourd (USVL1VR-Ls)	cpelsiB685
Cp4.1LG07g03410	MELO3C011317.2	Melon (DHL92) v3.6.1	cpemedB897
Cp4.1LG07g03410	CsaV3_2G032640	Cucumber (Chinese Long) v3	cpecucB1004
Cp4.1LG07g03410	Bhi04G000065	Wax gourd	cpewgoB1029
Cp4.1LG07g03410	CsGy2G023880	Cucumber (Gy14) v2	cgybcpeB260
Cp4.1LG07g03410	Carg09377	Silver-seed gourd	carcpeB0205

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG07g03410	Cp4.1LG11g02780	Cucurbita pepo (Zucchini)	cpecpeB146

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG07g03410	Cucurbita pepo (Zucchini)	cpecpeB513
Cp4.1LG07g03410	Cucumber (Gy14) v1	cgycpeB0713
Cp4.1LG07g03410	Cucumber (Chinese Long) v2	cpecuB833
Cp4.1LG07g03410	Melon (DHL92) v3.5.1	cpemeB783
Cp4.1LG07g03410	Silver-seed gourd	carcpeB1368