CmoCh05G003400 (gene) Cucurbita moschata (Rifu)

NameCmoCh05G003400
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCOL domain class transcription factor
LocationCmo_Chr05 : 1519922 .. 1521739 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GACAAAAATAAAAAAATTAATAGGGTATAAAGTAGCCAAAACACGTGTACACATCGTGATGTGGACCTCACTCTTAACTTTTGCTTGGCCTCATCGAAAAATGATGAAGAAAAAATCCTTTGATTTTAAACCCCTAAATATTTATTAATTTCCCCCTACACTGAACGCGATAAATACTTTTTGTTTCTATGGCTAAGCCTGGGCCACGTGGTGATGCTTTATTCGTCCGTGACTGGATTTCGTCGGCCCCACCGGATAGACTCGAACACGCGTGACTTCCCAAAAGAATAGTATAGAACCAAAGGGAAGAGAGAGAGAACAGAGAGAGACTTTACATACCATTTTCAGTTTTCCGCCATTGAAGTATGGCTTCGAAGCTTTGTGATTCGTGTAAGTCCGCCACCGCTACTCTCTTCTGCCGAGCCGACTCTGCCTTCCTTTGCCTTGGCTGTGATTCCGAAGTTCACGCAGCCAACAAACTCGCCTCTCGCCATGCTCGCGTTTGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGCAAGGCCGATGCCGCTGCTCTCTGCCTCGCTTGTGACCACGATATTCATTCTGCTAATCCCCTCGCACGCCGTCACGAGCGAGTTCCGGTCACGCCGTTCTACGACACCTCCAACTCCGAGAACTCCCTCGCTGTCAAGCCTGGCGCTGCAATCAACTTCCTCGACGACCGCTACTTCTCCGATGTCGATGCCGATGCCGCTGATGTCAGTAGAGAAGAGGCCGAGGCTGCTTCTTGGCTTCTTCCGAACCCTAACCCTAAGGCAATCGAAAGTCCAGATTTTAACTCGGGGAAGTTTGAGTTTCCAGAAATGGATCCTTACCTAGATCTGGATTACGGTCATGTGGATCCGAAATTGGAAGCGCAAGAGCAGAACAGCTCTGGTGCCGATGGAGTTGTTCCTGATCAGACCAAAGGCGTCCATCTCGCATCAGTTAACGATCGCTGCTTCAACATAGACTTCCCCGGCGCCAAATCGTTCCCGTACGGTTTCAATCCTCAGTCAATCAGTCACAGTGTAAGTCATTGTTTCTTTCAACATTCTCTTCCGCTTAGTTTCTCATCCAAAATCTAAATACGAATTAGTCTGAAACATCGATCTCACATGTTCTTCACCATCAGGTATCATCTTCGTCAGTCGAGGTTGGAGTCGTGCCAGACGGTAGCGCAATGACGGATGTATCAAATCCGTACACAAAACCGTCGACGGAATCGTCGATTCAACCGCTGCAAATCTCGCCGGCGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCGTACGCCGAGACGCGACCTCGAATCAAAGGACGGTTCGCCAAAAGGACGGACATCGAACTCGAGGTTGACCGAGTGAGTGGATACGGCGTCGTTCCGTCATTCTAAGTTTTTTAATTTATTAATAATTATAAAAAAAGAAAAAAAAAAGTTTGTGTAAATACGAAGGAAGAAGAATAGTCGGGGGGTTGAAAAGGAGGTTTTGATCCACGAAATCTGACCGTTGGATCATGTACACAACTCTTCTTTTTTTGTAGCACTGAATCTTTTGCCTTTTCCTTTTTCCCTTACTTTTTGTAACGAAAATCTTTCAGATTTTGGTCAAAAAGGTCTTCTAAATTTTCCTATTATTTTTATTTTTATTTTTAATTTTCAATTTTGTTGAAGTAAGCACCGTTAATTTATAAAATATTTTTGTTTTTGTAAAGAATCTCCCATAATAA

mRNA sequence

GACAAAAATAAAAAAATTAATAGGGTATAAAGTAGCCAAAACACGTGTACACATCGTGATGTGGACCTCACTCTTAACTTTTGCTTGGCCTCATCGAAAAATGATGAAGAAAAAATCCTTTGATTTTAAACCCCTAAATATTTATTAATTTCCCCCTACACTGAACGCGATAAATACTTTTTGTTTCTATGGCTAAGCCTGGGCCACGTGGTGATGCTTTATTCGTCCGTGACTGGATTTCGTCGGCCCCACCGGATAGACTCGAACACGCGTGACTTCCCAAAAGAATAGTATAGAACCAAAGGGAAGAGAGAGAGAACAGAGAGAGACTTTACATACCATTTTCAGTTTTCCGCCATTGAAGTATGGCTTCGAAGCTTTGTGATTCGTGTAAGTCCGCCACCGCTACTCTCTTCTGCCGAGCCGACTCTGCCTTCCTTTGCCTTGGCTGTGATTCCGAAGTTCACGCAGCCAACAAACTCGCCTCTCGCCATGCTCGCGTTTGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGCAAGGCCGATGCCGCTGCTCTCTGCCTCGCTTGTGACCACGATATTCATTCTGCTAATCCCCTCGCACGCCGTCACGAGCGAGTTCCGGTCACGCCGTTCTACGACACCTCCAACTCCGAGAACTCCCTCGCTGTCAAGCCTGGCGCTGCAATCAACTTCCTCGACGACCGCTACTTCTCCGATGTCGATGCCGATGCCGCTGATGTCAGTAGAGAAGAGGCCGAGGCTGCTTCTTGGCTTCTTCCGAACCCTAACCCTAAGGCAATCGAAAGTCCAGATTTTAACTCGGGGAAGTTTGAGTTTCCAGAAATGGATCCTTACCTAGATCTGGATTACGGTCATGTGGATCCGAAATTGGAAGCGCAAGAGCAGAACAGCTCTGGTGCCGATGGAGTTGTTCCTGATCAGACCAAAGGCGTCCATCTCGCATCAGTTAACGATCGCTGCTTCAACATAGACTTCCCCGGCGCCAAATCGTTCCCGTACGGTTTCAATCCTCAGTCAATCAGTCACAGTGTATCATCTTCGTCAGTCGAGGTTGGAGTCGTGCCAGACGGTAGCGCAATGACGGATGTATCAAATCCGTACACAAAACCGTCGACGGAATCGTCGATTCAACCGCTGCAAATCTCGCCGGCGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCGTACGCCGAGACGCGACCTCGAATCAAAGGACGGTTCGCCAAAAGGACGGACATCGAACTCGAGGTTGACCGAGTGAGTGGATACGGCGTCGTTCCGTCATTCTAAGTTTTTTAATTTATTAATAATTATAAAAAAAGAAAAAAAAAAGTTTGTGTAAATACGAAGGAAGAAGAATAGTCGGGGGGTTGAAAAGGAGGTTTTGATCCACGAAATCTGACCGTTGGATCATGTACACAACTCTTCTTTTTTTGTAGCACTGAATCTTTTGCCTTTTCCTTTTTCCCTTACTTTTTGTAACGAAAATCTTTCAGATTTTGGTCAAAAAGGTCTTCTAAATTTTCCTATTATTTTTATTTTTATTTTTAATTTTCAATTTTGTTGAAGTAAGCACCGTTAATTTATAAAATATTTTTGTTTTTGTAAAGAATCTCCCATAATAA

Coding sequence (CDS)

ATGGCTTCGAAGCTTTGTGATTCGTGTAAGTCCGCCACCGCTACTCTCTTCTGCCGAGCCGACTCTGCCTTCCTTTGCCTTGGCTGTGATTCCGAAGTTCACGCAGCCAACAAACTCGCCTCTCGCCATGCTCGCGTTTGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCTCATGTTACCTGCAAGGCCGATGCCGCTGCTCTCTGCCTCGCTTGTGACCACGATATTCATTCTGCTAATCCCCTCGCACGCCGTCACGAGCGAGTTCCGGTCACGCCGTTCTACGACACCTCCAACTCCGAGAACTCCCTCGCTGTCAAGCCTGGCGCTGCAATCAACTTCCTCGACGACCGCTACTTCTCCGATGTCGATGCCGATGCCGCTGATGTCAGTAGAGAAGAGGCCGAGGCTGCTTCTTGGCTTCTTCCGAACCCTAACCCTAAGGCAATCGAAAGTCCAGATTTTAACTCGGGGAAGTTTGAGTTTCCAGAAATGGATCCTTACCTAGATCTGGATTACGGTCATGTGGATCCGAAATTGGAAGCGCAAGAGCAGAACAGCTCTGGTGCCGATGGAGTTGTTCCTGATCAGACCAAAGGCGTCCATCTCGCATCAGTTAACGATCGCTGCTTCAACATAGACTTCCCCGGCGCCAAATCGTTCCCGTACGGTTTCAATCCTCAGTCAATCAGTCACAGTGTATCATCTTCGTCAGTCGAGGTTGGAGTCGTGCCAGACGGTAGCGCAATGACGGATGTATCAAATCCGTACACAAAACCGTCGACGGAATCGTCGATTCAACCGCTGCAAATCTCGCCGGCGGATCGGGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCGTACGCCGAGACGCGACCTCGAATCAAAGGACGGTTCGCCAAAAGGACGGACATCGAACTCGAGGTTGACCGAGTGAGTGGATACGGCGTCGTTCCGTCATTCTAA
BLAST of CmoCh05G003400 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 422.5 bits (1085), Expect = 4.2e-117
Identity = 231/367 (62.94%), Postives = 272/367 (74.11%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATA L+CR D+AFLCL CDS+VHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHERVPVTPFYD+ +S+ S+      A+NFLDD YF
Sbjct: 61  CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAI------------------ESPDFNSG-KFE 180
           SD+D + +    EE EAASWLL  PNPK                    +SP+ N+G ++ 
Sbjct: 121 SDIDGNGSR-EEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYL 180

Query: 181 FPEMDPYLDLDYGHVDPKLEAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFP-GAKS 240
           F + DPYLDLDYG+VDPK+E+ EQNSSG DGVVP + + V + +VN+ CF +DF  G+K 
Sbjct: 181 FSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKG 240

Query: 241 FPYGFNPQSISHSVSSSSVEVGVVPDGSAMTDVSNPYTKPSTESSIQPLQ----ISPADR 300
           F YG     ISHSVSSSS+EVGVVPDG ++ DVS PY  P+T  +    Q    ++ A+R
Sbjct: 241 FTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAER 300

Query: 301 EARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV------SG 338
           EARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG
Sbjct: 301 EARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSG 360

BLAST of CmoCh05G003400 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 5.7e-82
Identity = 185/341 (54.25%), Postives = 220/341 (64.52%), Query Frame = 1

Query: 2   ASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCKS  ATLFCRAD+AFLC  CD ++H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFS 121
           KADAAALC+ CD DIHSANPL+RRHERVP+TPFYD      S +    +++NF       
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSAS----SSVNF------- 123

Query: 122 DVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKLE 181
            VD D  DV+      ASWLL     + IE  +             + DLDY    PK+E
Sbjct: 124 -VDEDGGDVT------ASWLLAK---EGIEITNL------------FSDLDY----PKIE 183

Query: 182 -AQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 241
              E+NSSG DGVVP Q K      +N+  FN D   +K    GFN   I+ +VS+ +++
Sbjct: 184 VTSEENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTID 243

Query: 242 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 301
           V +VP+       S   T   T +    +Q+SPA+REARVLRYREKRKNRKFEKTIRYAS
Sbjct: 244 VPLVPE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYAS 294

Query: 302 RKAYAETRPRIKGRFAKRTDIEL----EVDRVSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTD       +V    G+GVVPSF
Sbjct: 304 RKAYAEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

BLAST of CmoCh05G003400 vs. Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 293.5 bits (750), Expect = 2.9e-78
Identity = 179/351 (51.00%), Postives = 219/351 (62.39%), Query Frame = 1

Query: 2   ASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CKS TA +FCR DSAFLC+ CD+ +H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+D   S  +   K  A+  F      +
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFD---SAETAVAKISASSTFGILGSST 137

Query: 122 DVDADAADVSREEAEAASWLLPNP--NPKAIESPDFN---SGKFEFPEMDPYLDLDYGHV 181
            VD  A  V  ++     WLLPN    P  IE    N   S  F F + D  +D ++   
Sbjct: 138 TVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF--- 197

Query: 182 DPKLEAQEQNSSGADGVVPDQTKGVHL-ASVNDRCFNIDFPGAKSFPYGFNPQSISHSVS 241
            P      QN++G D +VP QTK   L  + ND CF+IDF  +K   + +  QS+SHSVS
Sbjct: 198 -PNSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVS 257

Query: 242 SSSVEVGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKT 301
           +SS+E GVVPDG+    V+      ST       Q S  DREARVLRYREKRKNRKFEKT
Sbjct: 258 TSSIEYGVVPDGNTNNSVNRSTITSSTTGGDH--QASSMDREARVLRYREKRKNRKFEKT 317

Query: 302 IRYASRKAYAETRPRIKGRFAKRTDIELEVDRVS---------GYGVVPSF 338
           IRYASRKAYAE+RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 IRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

BLAST of CmoCh05G003400 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.7e-68
Identity = 166/356 (46.63%), Postives = 216/356 (60.67%), Query Frame = 1

Query: 3   SKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFSD 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKLEA 182
            + +  D    EAEAASWLLPN    +  +  F+ G  EF  +  Y   D    D   + 
Sbjct: 129 QEEEDED----EAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQY 188

Query: 183 Q-----EQNSSGADGVVPDQ---TKGVHLASVN-DRCFNIDFPGAKSFPYGFNPQSISHS 242
           Q      Q S G DGVVP Q   +KG++    N     N    GA     G    S+SH 
Sbjct: 189 QLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNG----SLSHM 248

Query: 243 VSSSSVEVGVVPDGSAM-TDVSNPYT-KPSTESSIQP--LQISPADREARVLRYREKRKN 302
           V+ SS+++GVVP+ +     VSNP + K  T+    P    +SP DREARVLRYREK+K 
Sbjct: 249 VNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKM 308

Query: 303 RKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV--------SGYGVVPSF 338
           RKFEKTIRYASRKAYAE RPRIKGRFAK+ D++ E ++         +GYG+VPSF
Sbjct: 309 RKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

BLAST of CmoCh05G003400 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.3e-65
Identity = 165/360 (45.83%), Postives = 215/360 (59.72%), Query Frame = 1

Query: 3   SKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+SA  T++C ADSA+LC  CD+ VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFSD 122
           ADAA+LC ACD +IHSANPLARRH+RVP+ P   ++NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDL-DY-GHVDPKL 182
                        E ASWLLPNP        + N+G     E   YLDL DY   +D + 
Sbjct: 133 -------------EVASWLLPNPGKNI---GNQNNGFLFGVE---YLDLVDYSSSMDNQF 192

Query: 183 EAQE----QNSSGADGVVPDQTK--GVHL-ASVNDRCFNIDFPGAKSFPYGFNP-QSISH 242
           E  +    Q S G DGVVP Q +    HL  S  +    I++  +    Y  N  + ++H
Sbjct: 193 EDNQYTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNH 252

Query: 243 SVSSSSVEVGVVPDGSAM-TDVSNPYTKPSTESSIQ------PLQISPADREARVLRYRE 302
           S S SS+++ VVP+ +A    V +P T   T   +         Q++P +REARVLRYRE
Sbjct: 253 SASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYRE 312

Query: 303 KRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV--------SGYGVVPSF 338
           K+K RKF+KTIRYASRKAYAE RPRIKGRFAKR + E E + +        +GYG+VPSF
Sbjct: 313 KKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

BLAST of CmoCh05G003400 vs. TrEMBL
Match: A0A0A0LSP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.0e-178
Identity = 315/337 (93.47%), Postives = 324/337 (96.14%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALCL CDHDIHSANPLARRHERVPVTPFYDTSNS+NSL VKP AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVDADAADVSREEAEAASWLLPNPNPKAIES D NSGKFEFPEMDPYLDLDY HVDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           EAQEQNSSGADGVVP Q+KGVHL+S NDRC  IDF G KSFPYG NPQSISHSVSSSS+E
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDG+AMTDVSNPYTKPSTESS+QPLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDRVSGYGVVPSF 338
           RKAYAETRPRIKGRFAKRTDIEL+VDRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmoCh05G003400 vs. TrEMBL
Match: A0A0D3R297_GOSHI (CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. TrEMBL
Match: A0A0D3R2U2_GOSTO (CONSTANS-like 5 protein OS=Gossypium tomentosum PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. TrEMBL
Match: A0A0D3R2E3_GOSDA (CONSTANS-like 5 protein OS=Gossypium darwinii PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. TrEMBL
Match: A0A0B0PKX1_GOSAR (Zinc finger CONSTANS-LIKE 4-like protein OS=Gossypium arboreum GN=F383_09644 PE=4 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 422.5 bits (1085), Expect = 2.4e-118
Identity = 231/367 (62.94%), Postives = 272/367 (74.11%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATA L+CR D+AFLCL CDS+VHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 45  MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHERVPVTPFYD+ +S+ S+      A+NFLDD YF
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 164

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAI------------------ESPDFNSG-KFE 180
           SD+D + +    EE EAASWLL  PNPK                    +SP+ N+G ++ 
Sbjct: 165 SDIDGNGSR-EEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYL 224

Query: 181 FPEMDPYLDLDYGHVDPKLEAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFP-GAKS 240
           F + DPYLDLDYG+VDPK+E+ EQNSSG DGVVP + + V + +VN+ CF +DF  G+K 
Sbjct: 225 FSDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKG 284

Query: 241 FPYGFNPQSISHSVSSSSVEVGVVPDGSAMTDVSNPYTKPSTESSIQPLQ----ISPADR 300
           F YG     ISHSVSSSS+EVGVVPDG ++ DVS PY  P+T  +    Q    ++ A+R
Sbjct: 285 FTYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAER 344

Query: 301 EARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV------SG 338
           EARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG
Sbjct: 345 EARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSG 404

BLAST of CmoCh05G003400 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 305.8 bits (782), Expect = 3.2e-83
Identity = 185/341 (54.25%), Postives = 220/341 (64.52%), Query Frame = 1

Query: 2   ASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCKS  ATLFCRAD+AFLC  CD ++H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFS 121
           KADAAALC+ CD DIHSANPL+RRHERVP+TPFYD      S +    +++NF       
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSAS----SSVNF------- 123

Query: 122 DVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKLE 181
            VD D  DV+      ASWLL     + IE  +             + DLDY    PK+E
Sbjct: 124 -VDEDGGDVT------ASWLLAK---EGIEITNL------------FSDLDY----PKIE 183

Query: 182 -AQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 241
              E+NSSG DGVVP Q K      +N+  FN D   +K    GFN   I+ +VS+ +++
Sbjct: 184 VTSEENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTID 243

Query: 242 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 301
           V +VP+       S   T   T +    +Q+SPA+REARVLRYREKRKNRKFEKTIRYAS
Sbjct: 244 VPLVPE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYAS 294

Query: 302 RKAYAETRPRIKGRFAKRTDIEL----EVDRVSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTD       +V    G+GVVPSF
Sbjct: 304 RKAYAEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

BLAST of CmoCh05G003400 vs. TAIR10
Match: AT5G57660.1 (AT5G57660.1 CONSTANS-like 5)

HSP 1 Score: 293.5 bits (750), Expect = 1.7e-79
Identity = 179/351 (51.00%), Postives = 219/351 (62.39%), Query Frame = 1

Query: 2   ASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CKS TA +FCR DSAFLC+ CD+ +H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+D   S  +   K  A+  F      +
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFD---SAETAVAKISASSTFGILGSST 137

Query: 122 DVDADAADVSREEAEAASWLLPNP--NPKAIESPDFN---SGKFEFPEMDPYLDLDYGHV 181
            VD  A  V  ++     WLLPN    P  IE    N   S  F F + D  +D ++   
Sbjct: 138 TVDLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF--- 197

Query: 182 DPKLEAQEQNSSGADGVVPDQTKGVHL-ASVNDRCFNIDFPGAKSFPYGFNPQSISHSVS 241
            P      QN++G D +VP QTK   L  + ND CF+IDF  +K   + +  QS+SHSVS
Sbjct: 198 -PNSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVS 257

Query: 242 SSSVEVGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKT 301
           +SS+E GVVPDG+    V+      ST       Q S  DREARVLRYREKRKNRKFEKT
Sbjct: 258 TSSIEYGVVPDGNTNNSVNRSTITSSTTGGDH--QASSMDREARVLRYREKRKNRKFEKT 317

Query: 302 IRYASRKAYAETRPRIKGRFAKRTDIELEVDRVS---------GYGVVPSF 338
           IRYASRKAYAE+RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 IRYASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

BLAST of CmoCh05G003400 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 259.6 bits (662), Expect = 2.6e-69
Identity = 166/356 (46.63%), Postives = 216/356 (60.67%), Query Frame = 1

Query: 3   SKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+SA  T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFSD 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKLEA 182
            + +  D    EAEAASWLLPN    +  +  F+ G  EF  +  Y   D    D   + 
Sbjct: 129 QEEEDED----EAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQY 188

Query: 183 Q-----EQNSSGADGVVPDQ---TKGVHLASVN-DRCFNIDFPGAKSFPYGFNPQSISHS 242
           Q      Q S G DGVVP Q   +KG++    N     N    GA     G    S+SH 
Sbjct: 189 QLDCNVPQRSYGEDGVVPLQIEVSKGMYQEQQNFQLSINCGSWGALRSSNG----SLSHM 248

Query: 243 VSSSSVEVGVVPDGSAM-TDVSNPYT-KPSTESSIQP--LQISPADREARVLRYREKRKN 302
           V+ SS+++GVVP+ +     VSNP + K  T+    P    +SP DREARVLRYREK+K 
Sbjct: 249 VNVSSMDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKM 308

Query: 303 RKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV--------SGYGVVPSF 338
           RKFEKTIRYASRKAYAE RPRIKGRFAK+ D++ E ++         +GYG+VPSF
Sbjct: 309 RKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

BLAST of CmoCh05G003400 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 248.8 bits (634), Expect = 4.7e-66
Identity = 165/360 (45.83%), Postives = 215/360 (59.72%), Query Frame = 1

Query: 3   SKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+SA  T++C ADSA+LC  CD+ VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYFSD 122
           ADAA+LC ACD +IHSANPLARRH+RVP+ P   ++NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDL-DY-GHVDPKL 182
                        E ASWLLPNP        + N+G     E   YLDL DY   +D + 
Sbjct: 133 -------------EVASWLLPNPGKNI---GNQNNGFLFGVE---YLDLVDYSSSMDNQF 192

Query: 183 EAQE----QNSSGADGVVPDQTK--GVHL-ASVNDRCFNIDFPGAKSFPYGFNP-QSISH 242
           E  +    Q S G DGVVP Q +    HL  S  +    I++  +    Y  N  + ++H
Sbjct: 193 EDNQYTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNH 252

Query: 243 SVSSSSVEVGVVPDGSAM-TDVSNPYTKPSTESSIQ------PLQISPADREARVLRYRE 302
           S S SS+++ VVP+ +A    V +P T   T   +         Q++P +REARVLRYRE
Sbjct: 253 SASVSSMDISVVPESTASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYRE 312

Query: 303 KRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDIELEVDRV--------SGYGVVPSF 338
           K+K RKF+KTIRYASRKAYAE RPRIKGRFAKR + E E + +        +GYG+VPSF
Sbjct: 313 KKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

BLAST of CmoCh05G003400 vs. NCBI nr
Match: gi|659089027|ref|XP_008445288.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo])

HSP 1 Score: 638.3 bits (1645), Expect = 7.8e-180
Identity = 317/337 (94.07%), Postives = 326/337 (96.74%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALCL CDHDIHSANPLARRHERVPVTPFYDTSNS+NSLAVKPGAAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLAVKPGAAINFLDDRYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVDADAADVSREEAEAASWLLPNPNPKAIES D NS KFEFPEMDPYLDLDYGHVDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSSKFEFPEMDPYLDLDYGHVDPKL 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           EAQEQNSSGADGVVP Q+KGVHL+S NDRC  IDF G KSFPYG NPQSISHSVSSSS+E
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDG+AMTDVSNPYTKPSTESS+QPLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDRVSGYGVVPSF 338
           RKAYAETRPRIKGRFAKRTDIEL+VDRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmoCh05G003400 vs. NCBI nr
Match: gi|449441842|ref|XP_004138691.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 1.5e-178
Identity = 315/337 (93.47%), Postives = 324/337 (96.14%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLCLGCDS+VHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALCL CDHDIHSANPLARRHERVPVTPFYDTSNS+NSL VKP AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVDADAADVSREEAEAASWLLPNPNPKAIES D NSGKFEFPEMDPYLDLDY HVDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           EAQEQNSSGADGVVP Q+KGVHL+S NDRC  IDF G KSFPYG NPQSISHSVSSSS+E
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDG+AMTDVSNPYTKPSTESS+QPLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDRVSGYGVVPSF 338
           RKAYAETRPRIKGRFAKRTDIEL+VDRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmoCh05G003400 vs. NCBI nr
Match: gi|728845631|gb|KHG25074.1| (Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum])

HSP 1 Score: 526.6 bits (1355), Expect = 3.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. NCBI nr
Match: gi|765198897|gb|AJR28784.1| (CONSTANS-like 5 protein [Gossypium barbadense])

HSP 1 Score: 526.2 bits (1354), Expect = 4.3e-146
Identity = 266/339 (78.47%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   ES+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPESTHQMVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmoCh05G003400 vs. NCBI nr
Match: gi|765198853|gb|AJR28762.1| (CONSTANS-like 5 protein [Gossypium hirsutum])

HSP 1 Score: 525.4 bits (1352), Expect = 7.3e-146
Identity = 265/339 (78.17%), Postives = 296/339 (87.32%), Query Frame = 1

Query: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSEVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCKSATATLFCRADSAFLC  CDS++HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCLACDHDIHSANPLARRHERVPVTPFYDTSNSENSLAVKPGAAINFLDDRYF 120
           CKADAAALC+ CD DIHSANPLARRHER+PVTPFYD+ NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNSVP--AVKPNGVVNFLEERYF 120

Query: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESPDFNSGKFEFPEMDPYLDLDYGHVDPKL 180
           SDVD DA DVSREEAEAASWLLPNPN KA++SPD NSG++ F EMDPYLDLDYGH DPK+
Sbjct: 121 SDVDGDA-DVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKM 180

Query: 181 EAQEQNSSGADGVVPDQTKGVHLASVNDRCFNIDFPGAKSFPYGFNPQSISHSVSSSSVE 240
           +AQEQNSSG DGVVP Q+K V   S ND CF++DF G+K F YG+NP  ISHSVSSSS++
Sbjct: 181 DAQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLD 240

Query: 241 VGVVPDGSAMTDVSNPYTKPSTESSIQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVPDGS MTD+SNPY +   +S+ Q +Q+SPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGSTMTDISNPYGR-GPQSTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAETRPRIKGRFAKRTDIELEVDR--VSGYGVVPSF 338
           RKAYAE RPRIKGRFAKRTDIE+EVDR  + G+GVVPSF
Sbjct: 301 RKAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
COL4_ARATH4.2e-11762.94Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2[more]
COL3_ARATH5.7e-8254.25Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1[more]
COL5_ARATH2.9e-7851.00Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2[more]
COL1_ARATH4.7e-6846.63Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1[more]
COL2_ARATH8.3e-6545.83Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LSP8_CUCSA1.0e-17893.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1[more]
A0A0D3R297_GOSHI2.3e-14678.47CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1[more]
A0A0D3R2U2_GOSTO2.3e-14678.47CONSTANS-like 5 protein OS=Gossypium tomentosum PE=4 SV=1[more]
A0A0D3R2E3_GOSDA2.3e-14678.47CONSTANS-like 5 protein OS=Gossypium darwinii PE=4 SV=1[more]
A0A0B0PKX1_GOSAR2.3e-14678.47Zinc finger CONSTANS-LIKE 4-like protein OS=Gossypium arboreum GN=F383_09644 PE=... [more]
Match NameE-valueIdentityDescription
AT5G24930.12.4e-11862.94 CONSTANS-like 4[more]
AT2G24790.13.2e-8354.25 CONSTANS-like 3[more]
AT5G57660.11.7e-7951.00 CONSTANS-like 5[more]
AT5G15850.12.6e-6946.63 CONSTANS-like 1[more]
AT3G02380.14.7e-6645.83 CONSTANS-like 2[more]
Match NameE-valueIdentityDescription
gi|659089027|ref|XP_008445288.1|7.8e-18094.07PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo][more]
gi|449441842|ref|XP_004138691.1|1.5e-17893.47PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus][more]
gi|728845631|gb|KHG25074.1|3.3e-14678.47Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum][more]
gi|765198897|gb|AJR28784.1|4.3e-14678.47CONSTANS-like 5 protein [Gossypium barbadense][more]
gi|765198853|gb|AJR28762.1|7.3e-14678.17CONSTANS-like 5 protein [Gossypium hirsutum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR010402CCT_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh05G003400.1CmoCh05G003400.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 46..91
score: 3.2E-6coord: 4..43
score: 1.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 49..91
score: 2.3E-8coord: 1..48
score: 3.0
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 44..91
score: 10.552coord: 1..48
score: 10
IPR010402CCT domainPFAMPF06203CCTcoord: 276..318
score: 5.0
IPR010402CCT domainPROFILEPS51017CCTcoord: 276..318
score: 16
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 1..337
score: 7.6E
NoneNo IPR availablePANTHERPTHR31319:SF6SUBFAMILY NOT NAMEDcoord: 1..337
score: 7.6E

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh05G003400CmoCh12G003290Cucurbita moschata (Rifu)cmocmoB156
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh05G003400Silver-seed gourdcarcmoB1319
CmoCh05G003400Cucumber (Chinese Long) v3cmocucB0932
CmoCh05G003400Cucumber (Gy14) v1cgycmoB0749
CmoCh05G003400Wild cucumber (PI 183967)cmocpiB794
CmoCh05G003400Cucumber (Chinese Long) v2cmocuB791
CmoCh05G003400Melon (DHL92) v3.5.1cmomeB731
CmoCh05G003400Watermelon (Charleston Gray)cmowcgB704
CmoCh05G003400Watermelon (97103) v1cmowmB751