CmaCh12G003770 (gene) Cucurbita maxima (Rimu)

NameCmaCh12G003770
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCOL domain class transcription factor
LocationCma_Chr12 : 1944414 .. 1946056 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCCCATTCGTCCATGGCTGATTTCCTTGGTCCCACAGGATAGACTCTCACGCGCATGATGAACAAAAGGAATAGCATAGAGCTGTGAGAGAGAGAGAGAGAGATTACATACCATTTTCTTCAGTTTTCCGCCATTGAAGTATGGCTTCGAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCACATGTTACCTGCAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCCGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCTGATGTCAACACCGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACCTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTGAACGATCGTAGCTTCGGCATCGACTTCCCGTGCGCCAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTAAGTCATCGCAGTTCTCAAATTCCTCGTCCAATTAGTTTCTCATCAAAAATCAAAATCCGGCACCTATAAGATGAATTGATGTAACCACAACATGAATCTCACCTCTCACCTATTCTTCATGACTTTCAGGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAATACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGAAGAGACCACGAATCAAGGGACGGTTCGCCAAACGGACGGACATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAAGTTTGAATATTTAATAAAATAATAATTAATTAAAAAATAGTTCGTGTAAATAGGAAGGAAGAAAAATAGCTGGGGCAGTTGATCAACGAAATCTGACCGTTGGATCAAGTACAGCTCTTTTTTTTTTTCTTTTTTCTTTTTGTGTAAAGAAAATCTATGGGAGTTTGGTCAAAAAGGTTTTCGAAATCCCAATTTTCCTTAATTTTTAATTTTAGATATTGGGATTTTGTCTATCATTTTATGAAACTTTATTGGTGAGCTGAATTAGCTTCGTCTTTGGTTTGGATATTTTATTTAATTTTAACGGAAATAGTAGATATTATTCACTTTAATCGTTACATCATGATTTTAAAACACTTCGGAAG

mRNA sequence

TCTCTCCCATTCGTCCATGGCTGATTTCCTTGGTCCCACAGGATAGACTCTCACGCGCATGATGAACAAAAGGAATAGCATAGAGCTGTGAGAGAGAGAGAGAGAGATTACATACCATTTTCTTCAGTTTTCCGCCATTGAAGTATGGCTTCGAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCACATGTTACCTGCAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCCGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCTGATGTCAACACCGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACCTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTGAACGATCGTAGCTTCGGCATCGACTTCCCGTGCGCCAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAATACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGAAGAGACCACGAATCAAGGGACGGTTCGCCAAACGGACGGACATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAAGTTTGAATATTTAATAAAATAATAATTAATTAAAAAATAGTTCGTGTAAATAGGAAGGAAGAAAAATAGCTGGGGCAGTTGATCAACGAAATCTGACCGTTGGATCAAGTACAGCTCTTTTTTTTTTTCTTTTTTCTTTTTGTGTAAAGAAAATCTATGGGAGTTTGGTCAAAAAGGTTTTCGAAATCCCAATTTTCCTTAATTTTTAATTTTAGATATTGGGATTTTGTCTATCATTTTATGAAACTTTATTGGTGAGCTGAATTAGCTTCGTCTTTGGTTTGGATATTTTATTTAATTTTAACGGAAATAGTAGATATTATTCACTTTAATCGTTACATCATGATTTTAAAACACTTCGGAAG

Coding sequence (CDS)

ATGGCTTCGAAGCTTTGTGATTCCTGTAAGGTGGCCGCTGCCACTCTCTTCTGCCGAGCTGACTCTGCCTTTCTTTGCCTTGGCTGCGACTCCAAAGTCCATGCAGCCAACAAGCTTGCTTCCCGCCATGCGCGCGTATGGCTTTGTGAAGTCTGTGAGCAAGCTCCTGCACATGTTACCTGCAAGGCCGACGCTGCTGCTCTCTGCATCACTTGCGACCACGATATCCACTCTGCCAATCCCCTCGCTCGCCGTCATGAGCGAGTTCCTGTCACGCCTTTCTACGACTCTTCCAACTCCGACAACTCTCTCGCCGTTAAGCCTGCCGCTGCAATCAACTTCCTAGATGATCGTTATTTCTCTGATGTCAACACCGACGCCGCCGAAGAGGCCGAAGCTGCTTCCTGGCTTCTTCCAAACCCTAACCCTAAGCCAATCGAAAATACAGATCTGAACTCGGGGAAGTTAGAGTTTCTAGAAATGGATCCTTACCTAGATCTGGATTACGACCGCGTAGATCCGAAATTAGAAGTGCGAGAGCATAACAGCTCCGCCGCCGATGGAGTCGTTCCGGTTCAGAGCAAAGGCGTCGATCTCTCATCGGTGAACGATCGTAGCTTCGGCATCGACTTCCCGTGCGCCAAATCGTTCCCGTACAGTTACAATCCTCAGTCAATCAGTCACAGTGTATCATCCTCGTCGATCGAGGTCGGAGTCGTTCCGGAGGGGAATACGATAACGGAGATATCGAATCCGTACACGAAACCGTCGACGGAATCGACTGTTCCACCGCTGCAAATCTCGCCGGCAGATCGAGAGGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACAGAAAGTTCGAGAAGACGATTCGATACGCATCTCGTAAGGCCTACGCCGAGAAGAGACCACGAATCAAGGGACGGTTCGCCAAACGGACGGACATCGAGTTGGAAGCCGACCGAGTGAGTGGATACGGCGTCGTTCCGTCGTTCTAA

Protein sequence

MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSDVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAYAEKRPRIKGRFAKRTDIELEADRVSGYGVVPSF
BLAST of CmaCh12G003770 vs. Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 402.5 bits (1033), Expect = 4.4e-111
Identity = 224/366 (61.20%), Postives = 265/366 (72.40%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A A L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCD DIHSANPLARRHERVPVTPFYDS +SD S+      A+NFLDD YF
Sbjct: 61  CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 120

Query: 121 SDVNTDAA---EEAEAASWLLPNPNPK------------------PIENTDLNSG-KLEF 180
           SD++ + +   EE EAASWLL  PNPK                  P ++ ++N+G +  F
Sbjct: 121 SDIDGNGSREEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLF 180

Query: 181 LEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFP-CAKSF 240
            + DPYLDLDY  VDPK+E  E NSS  DGVVPV+++ V + +VN+  F +DF   +K F
Sbjct: 181 SDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKGF 240

Query: 241 PYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQ----ISPADRE 300
            Y      ISHSVSSSS+EVGVVP+G ++ ++S PY  P+T    P  Q    ++ A+RE
Sbjct: 241 TYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAERE 300

Query: 301 ARVLRYREKRKNRKFEKTIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV------SGY 334
           ARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG+
Sbjct: 301 ARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGF 360

BLAST of CmaCh12G003770 vs. Swiss-Prot
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 4.3e-82
Identity = 186/337 (55.19%), Postives = 222/337 (65.88%), Query Frame = 1

Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCK  AATLFCRAD+AFLC  CD K+H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC+TCD DIHSANPL+RRHERVP+TPFYD+       A   ++++NF+D+    
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGP----AKSASSSVNFVDE---- 123

Query: 122 DVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEV-RE 181
               D  +    ASWLL     + IE T+L            + DLDY    PK+EV  E
Sbjct: 124 ----DGGD--VTASWLLAK---EGIEITNL------------FSDLDY----PKIEVTSE 183

Query: 182 HNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVV 241
            NSS  DGVVPVQ+K      +N+  F  D   +K     +N   I+ +VS+ +I+V +V
Sbjct: 184 ENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTIDVPLV 243

Query: 242 PEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAY 301
           PE       S   T   T +  P +Q+SPA+REARVLRYREKRKNRKFEKTIRYASRKAY
Sbjct: 244 PE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAY 294

Query: 302 AEKRPRIKGRFAKRTDIEL----EADRVSGYGVVPSF 334
           AE RPRIKGRFAKRTD       +     G+GVVPSF
Sbjct: 304 AEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

BLAST of CmaCh12G003770 vs. Swiss-Prot
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 2.5e-74
Identity = 172/349 (49.28%), Postives = 219/349 (62.75%), Query Frame = 1

Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CK   A +FCR DSAFLC+ CD+++H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+DS+ +  +  +  ++    L      
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVA-KISASSTFGILGSSTTV 137

Query: 122 DVNT--DAAEEAEAASWLLPNP--NPKPIE-NTDLNSGKLEFL--EMDPYLDLDYDRVDP 181
           D+      A++     WLLPN    P  IE  T+   G  +F+  + D  +D ++    P
Sbjct: 138 DLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF----P 197

Query: 182 KLEVREHNSSAADGVVPVQSKGVDLS-SVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSS 241
                  N++  D +VPVQ+K   L  + ND  F IDF  +K   ++Y  QS+SHSVS+S
Sbjct: 198 NSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTS 257

Query: 242 SIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIR 301
           SIE GVVP+GNT   ++      ST  T    Q S  DREARVLRYREKRKNRKFEKTIR
Sbjct: 258 SIEYGVVPDGNTNNSVNRSTITSST--TGGDHQASSMDREARVLRYREKRKNRKFEKTIR 317

Query: 302 YASRKAYAEKRPRIKGRFAKRTDIELEADRVS---------GYGVVPSF 334
           YASRKAYAE RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 YASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

BLAST of CmaCh12G003770 vs. Swiss-Prot
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.1e-72
Identity = 166/351 (47.29%), Postives = 216/351 (61.54%), Query Frame = 1

Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSD 122
           ADAA+LC TCD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVR--- 182
              +  +EAEAASWLLPN       N   + G  EFL +  Y   D    D   + +   
Sbjct: 129 QEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQYQLDC 188

Query: 183 --EHNSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSS 242
                S   DGVVP+Q   SKG+     N   F +   C        +  S+SH V+ SS
Sbjct: 189 NVPQRSYGEDGVVPLQIEVSKGMYQEQQN---FQLSINCGSWGALRSSNGSLSHMVNVSS 248

Query: 243 IEVGVVPEGNTI-TEISNPYTKPST--ESTVPPLQ-ISPADREARVLRYREKRKNRKFEK 302
           +++GVVPE  T    +SNP +  +   +   PP Q +SP DREARVLRYREK+K RKFEK
Sbjct: 249 MDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEK 308

Query: 303 TIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
           TIRYASRKAYAEKRPRIKGRFAK+ D++ EA++         +GYG+VPSF
Sbjct: 309 TIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

BLAST of CmaCh12G003770 vs. Swiss-Prot
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 4.6e-68
Identity = 169/357 (47.34%), Postives = 226/357 (63.31%), Query Frame = 1

Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++C ADSA+LC  CD++VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSD 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P   S+NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDL-DY-DRVDPKLEVRE 182
                    E ASWLLPNP  K I N   N+G L  +E   YLDL DY   +D + E  +
Sbjct: 133 ---------EVASWLLPNPG-KNIGNQ--NNGFLFGVE---YLDLVDYSSSMDNQFEDNQ 192

Query: 183 H----NSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNP-QSISHSVSS 242
           +     S   DGVVP+Q   S      S  +   GI++  +    Y+ N  + ++HS S 
Sbjct: 193 YTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASV 252

Query: 243 SSIEVGVVPEGNTITEISNPYTKPSTES----TVPPLQI----SPADREARVLRYREKRK 302
           SS+++ VVPE +T ++I+  + + + E+    + PP Q+    +P +REARVLRYREK+K
Sbjct: 253 SSMDISVVPE-STASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKK 312

Query: 303 NRKFEKTIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
            RKF+KTIRYASRKAYAE RPRIKGRFAKR + E EA+ +        +GYG+VPSF
Sbjct: 313 TRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

BLAST of CmaCh12G003770 vs. TrEMBL
Match: A0A0A0LSP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 2.0e-163
Identity = 294/337 (87.24%), Postives = 309/337 (91.69%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSL VKP+AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SDVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           SDV+ DAA    EEAEAASWLLPNPNPK IE++DLNSGK EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAEKRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAE RPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmaCh12G003770 vs. TrEMBL
Match: A0A0D3R2E3_GOSDA (CONSTANS-like 5 protein OS=Gossypium darwinii PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.6e-134
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. TrEMBL
Match: A0A0D3R2R5_GOSHI (CONSTANS-like 5 protein OS=Gossypium hirsutum PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.6e-134
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. TrEMBL
Match: A0A0D3R297_GOSHI (CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.6e-134
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. TrEMBL
Match: A0A0D3R2X2_GOSHE (CONSTANS-like 5 protein OS=Gossypium herbaceum subsp. africanum PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 7.6e-134
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. TAIR10
Match: AT5G24930.1 (AT5G24930.1 CONSTANS-like 4)

HSP 1 Score: 402.5 bits (1033), Expect = 2.5e-112
Identity = 224/366 (61.20%), Postives = 265/366 (72.40%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A A L+CR D+AFLCL CDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 45  MASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVT 104

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCD DIHSANPLARRHERVPVTPFYDS +SD S+      A+NFLDD YF
Sbjct: 105 CKADAAALCVTCDRDIHSANPLARRHERVPVTPFYDSVSSDGSV---KHTAVNFLDDCYF 164

Query: 121 SDVNTDAA---EEAEAASWLLPNPNPK------------------PIENTDLNSG-KLEF 180
           SD++ + +   EE EAASWLL  PNPK                  P ++ ++N+G +  F
Sbjct: 165 SDIDGNGSREEEEEEAASWLL-LPNPKTTTTATAGIVAVTSAEEVPGDSPEMNTGQQYLF 224

Query: 181 LEMDPYLDLDYDRVDPKLEVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFP-CAKSF 240
            + DPYLDLDY  VDPK+E  E NSS  DGVVPV+++ V + +VN+  F +DF   +K F
Sbjct: 225 SDPDPYLDLDYGNVDPKVESLEQNSSGTDGVVPVENRTVRIPTVNENCFEMDFTGGSKGF 284

Query: 241 PYSYNPQSISHSVSSSSIEVGVVPEGNTITEISNPYTKPSTESTVPPLQ----ISPADRE 300
            Y      ISHSVSSSS+EVGVVP+G ++ ++S PY  P+T    P  Q    ++ A+RE
Sbjct: 285 TYGGGYNCISHSVSSSSMEVGVVPDGGSVADVSYPYGGPATSGADPGTQRAVPLTSAERE 344

Query: 301 ARVLRYREKRKNRKFEKTIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV------SGY 334
           ARV+RYREKRKNRKFEKTIRYASRKAYAE RPRIKGRFAKRTD     D V      SG+
Sbjct: 345 ARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDVVGHGGIFSGF 404

BLAST of CmaCh12G003770 vs. TAIR10
Match: AT2G24790.1 (AT2G24790.1 CONSTANS-like 3)

HSP 1 Score: 306.2 bits (783), Expect = 2.4e-83
Identity = 186/337 (55.19%), Postives = 222/337 (65.88%), Query Frame = 1

Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           +S+LCDSCK  AATLFCRAD+AFLC  CD K+H ANKLASRH RVWLCEVCEQAPAHVTC
Sbjct: 4   SSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAHVTC 63

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC+TCD DIHSANPL+RRHERVP+TPFYD+       A   ++++NF+D+    
Sbjct: 64  KADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGP----AKSASSSVNFVDE---- 123

Query: 122 DVNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEV-RE 181
               D  +    ASWLL     + IE T+L            + DLDY    PK+EV  E
Sbjct: 124 ----DGGD--VTASWLLAK---EGIEITNL------------FSDLDY----PKIEVTSE 183

Query: 182 HNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEVGVV 241
            NSS  DGVVPVQ+K      +N+  F  D   +K     +N   I+ +VS+ +I+V +V
Sbjct: 184 ENSSGNDGVVPVQNK----LFLNEDYFNFDLSASKISQQGFN--FINQTVSTRTIDVPLV 243

Query: 242 PEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASRKAY 301
           PE       S   T   T +  P +Q+SPA+REARVLRYREKRKNRKFEKTIRYASRKAY
Sbjct: 244 PE-------SGGVTAEMTNTETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAY 294

Query: 302 AEKRPRIKGRFAKRTDIEL----EADRVSGYGVVPSF 334
           AE RPRIKGRFAKRTD       +     G+GVVPSF
Sbjct: 304 AEMRPRIKGRFAKRTDSRENDGGDVGVYGGFGVVPSF 294

BLAST of CmaCh12G003770 vs. TAIR10
Match: AT5G57660.1 (AT5G57660.1 CONSTANS-like 5)

HSP 1 Score: 280.4 bits (716), Expect = 1.4e-75
Identity = 172/349 (49.28%), Postives = 219/349 (62.75%), Query Frame = 1

Query: 2   ASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTC 61
           A++ CD+CK   A +FCR DSAFLC+ CD+++H+     +RH RVW+CEVCEQAPA VTC
Sbjct: 18  AARSCDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWVCEVCEQAPAAVTC 77

Query: 62  KADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFS 121
           KADAAALC++CD DIHSANPLA RHERVPV  F+DS+ +  +  +  ++    L      
Sbjct: 78  KADAAALCVSCDADIHSANPLASRHERVPVETFFDSAETAVA-KISASSTFGILGSSTTV 137

Query: 122 DVNT--DAAEEAEAASWLLPNP--NPKPIE-NTDLNSGKLEFL--EMDPYLDLDYDRVDP 181
           D+      A++     WLLPN    P  IE  T+   G  +F+  + D  +D ++    P
Sbjct: 138 DLTAVPVMADDLGLCPWLLPNDFNEPAKIEIGTENMKGSSDFMFSDFDRLIDFEF----P 197

Query: 182 KLEVREHNSSAADGVVPVQSKGVDLS-SVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSS 241
                  N++  D +VPVQ+K   L  + ND  F IDF  +K   ++Y  QS+SHSVS+S
Sbjct: 198 NSFNHHQNNAGGDSLVPVQTKTEPLPLTNNDHCFDIDFCRSKLSAFTYPSQSVSHSVSTS 257

Query: 242 SIEVGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIR 301
           SIE GVVP+GNT   ++      ST  T    Q S  DREARVLRYREKRKNRKFEKTIR
Sbjct: 258 SIEYGVVPDGNTNNSVNRSTITSST--TGGDHQASSMDREARVLRYREKRKNRKFEKTIR 317

Query: 302 YASRKAYAEKRPRIKGRFAKRTDIELEADRVS---------GYGVVPSF 334
           YASRKAYAE RPRIKGRFAKRT+ E +   +S          YGVVP+F
Sbjct: 318 YASRKAYAESRPRIKGRFAKRTETENDDIFLSHVYASAAHAQYGVVPTF 355

BLAST of CmaCh12G003770 vs. TAIR10
Match: AT5G15850.1 (AT5G15850.1 CONSTANS-like 1)

HSP 1 Score: 275.0 bits (702), Expect = 6.0e-74
Identity = 166/351 (47.29%), Postives = 216/351 (61.54%), Query Frame = 1

Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++CRADSA+LC  CD++VHAAN+LASRH RV +C+ CE+APA   CK
Sbjct: 9   AQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFFCK 68

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSD 122
           ADAA+LC TCD +IHSANPLARRH+RVP+ P  + S S  +        +   ++R    
Sbjct: 69  ADAASLCTTCDSEIHSANPLARRHQRVPILPISEYSYSSTATNHSCETTVTDPENRLVLG 128

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLEVR--- 182
              +  +EAEAASWLLPN       N   + G  EFL +  Y   D    D   + +   
Sbjct: 129 QEEEDEDEAEAASWLLPNSGKNSGNNNGFSIGD-EFLNLVDYSSSDKQFTDQSNQYQLDC 188

Query: 183 --EHNSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSS 242
                S   DGVVP+Q   SKG+     N   F +   C        +  S+SH V+ SS
Sbjct: 189 NVPQRSYGEDGVVPLQIEVSKGMYQEQQN---FQLSINCGSWGALRSSNGSLSHMVNVSS 248

Query: 243 IEVGVVPEGNTI-TEISNPYTKPST--ESTVPPLQ-ISPADREARVLRYREKRKNRKFEK 302
           +++GVVPE  T    +SNP +  +   +   PP Q +SP DREARVLRYREK+K RKFEK
Sbjct: 249 MDLGVVPESTTSDATVSNPRSPKAVTDQPPYPPAQMLSPRDREARVLRYREKKKMRKFEK 308

Query: 303 TIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
           TIRYASRKAYAEKRPRIKGRFAK+ D++ EA++         +GYG+VPSF
Sbjct: 309 TIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFSTMITFDTGYGIVPSF 355

BLAST of CmaCh12G003770 vs. TAIR10
Match: AT3G02380.1 (AT3G02380.1 CONSTANS-like 2)

HSP 1 Score: 259.6 bits (662), Expect = 2.6e-69
Identity = 169/357 (47.34%), Postives = 226/357 (63.31%), Query Frame = 1

Query: 3   SKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVTCK 62
           ++ CD+C+ AA T++C ADSA+LC  CD++VHAAN++ASRH RV +C+ CE APA   CK
Sbjct: 13  ARACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCK 72

Query: 63  ADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYFSD 122
           ADAA+LC  CD +IHSANPLARRH+RVP+ P   S+NS +S+A     A N  DDR    
Sbjct: 73  ADAASLCTACDAEIHSANPLARRHQRVPILPL--SANSCSSMAPSETDADNDEDDR---- 132

Query: 123 VNTDAAEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDL-DY-DRVDPKLEVRE 182
                    E ASWLLPNP  K I N   N+G L  +E   YLDL DY   +D + E  +
Sbjct: 133 ---------EVASWLLPNPG-KNIGNQ--NNGFLFGVE---YLDLVDYSSSMDNQFEDNQ 192

Query: 183 H----NSSAADGVVPVQ---SKGVDLSSVNDRSFGIDFPCAKSFPYSYNP-QSISHSVSS 242
           +     S   DGVVP+Q   S      S  +   GI++  +    Y+ N  + ++HS S 
Sbjct: 193 YTHYQRSFGGDGVVPLQVEESTSHLQQSQQNFQLGINYGFSSGAHYNNNSLKDLNHSASV 252

Query: 243 SSIEVGVVPEGNTITEISNPYTKPSTES----TVPPLQI----SPADREARVLRYREKRK 302
           SS+++ VVPE +T ++I+  + + + E+    + PP Q+    +P +REARVLRYREK+K
Sbjct: 253 SSMDISVVPE-STASDITVQHPRTTKETIDQLSGPPTQVVQQLTPMEREARVLRYREKKK 312

Query: 303 NRKFEKTIRYASRKAYAEKRPRIKGRFAKRTDIELEADRV--------SGYGVVPSF 334
            RKF+KTIRYASRKAYAE RPRIKGRFAKR + E EA+ +        +GYG+VPSF
Sbjct: 313 TRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEEIFSTSLMSETGYGIVPSF 347

BLAST of CmaCh12G003770 vs. NCBI nr
Match: gi|449441842|ref|XP_004138691.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus])

HSP 1 Score: 583.2 bits (1502), Expect = 2.9e-163
Identity = 294/337 (87.24%), Postives = 309/337 (91.69%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSL VKP+AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLPVKPSAAINFLDDRYF 120

Query: 121 SDVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           SDV+ DAA    EEAEAASWLLPNPNPK IE++DLNSGK EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSGKFEFPEMDPYLDLDYSHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAEKRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAE RPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmaCh12G003770 vs. NCBI nr
Match: gi|659089027|ref|XP_008445288.1| (PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo])

HSP 1 Score: 582.0 bits (1499), Expect = 6.5e-163
Identity = 294/337 (87.24%), Postives = 308/337 (91.39%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLCLGCDSKVHAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCLGCDSKVHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALC+TCDHDIHSANPLARRHERVPVTPFYD+SNSDNSLAVKP AAINFLDDRYF
Sbjct: 61  CKADAAALCLTCDHDIHSANPLARRHERVPVTPFYDTSNSDNSLAVKPGAAINFLDDRYF 120

Query: 121 SDVNTDAA----EEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKL 180
           SDV+ DAA    EEAEAASWLLPNPNPK IE++DLNS K EF EMDPYLDLDY  VDPKL
Sbjct: 121 SDVDADAADVSREEAEAASWLLPNPNPKAIESSDLNSSKFEFPEMDPYLDLDYGHVDPKL 180

Query: 181 EVREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIE 240
           E +E NSS ADGVVPVQSKGV LSS NDR  GIDF   KSFPY +NPQSISHSVSSSSIE
Sbjct: 181 EAQEQNSSGADGVVPVQSKGVHLSSANDRCLGIDFTGTKSFPYGHNPQSISHSVSSSSIE 240

Query: 241 VGVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300
           VGVVP+GN +T++SNPYTKPSTES+V PLQISPADREARVLRYREKRKNRKFEKTIRYAS
Sbjct: 241 VGVVPDGNAMTDVSNPYTKPSTESSVQPLQISPADREARVLRYREKRKNRKFEKTIRYAS 300

Query: 301 RKAYAEKRPRIKGRFAKRTDIELEADRVSGYGVVPSF 334
           RKAYAE RPRIKGRFAKRTDIEL+ DRVSGYGVVPSF
Sbjct: 301 RKAYAETRPRIKGRFAKRTDIELDVDRVSGYGVVPSF 337

BLAST of CmaCh12G003770 vs. NCBI nr
Match: gi|728845631|gb|KHG25074.1| (Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum])

HSP 1 Score: 485.0 bits (1247), Expect = 1.1e-133
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. NCBI nr
Match: gi|765198897|gb|AJR28784.1| (CONSTANS-like 5 protein [Gossypium barbadense])

HSP 1 Score: 484.6 bits (1246), Expect = 1.4e-133
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHCFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQMVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

BLAST of CmaCh12G003770 vs. NCBI nr
Match: gi|765198889|gb|AJR28780.1| (CONSTANS-like 5 protein [Gossypium hirsutum subsp. latifolium])

HSP 1 Score: 484.2 bits (1245), Expect = 1.9e-133
Identity = 251/338 (74.26%), Postives = 280/338 (82.84%), Query Frame = 1

Query: 1   MASKLCDSCKVAAATLFCRADSAFLCLGCDSKVHAANKLASRHARVWLCEVCEQAPAHVT 60
           MASKLCDSCK A ATLFCRADSAFLC  CDSK+HAANKLASRHARVW+CEVCEQAPAHVT
Sbjct: 1   MASKLCDSCKSATATLFCRADSAFLCSNCDSKIHAANKLASRHARVWVCEVCEQAPAHVT 60

Query: 61  CKADAAALCITCDHDIHSANPLARRHERVPVTPFYDSSNSDNSLAVKPAAAINFLDDRYF 120
           CKADAAALCITCD DIHSANPLARRHER+PVTPFYDS NS    AVKP   +NFL++RYF
Sbjct: 61  CKADAAALCITCDRDIHSANPLARRHERLPVTPFYDSVNS--VPAVKPNGVVNFLEERYF 120

Query: 121 SDVNTDA---AEEAEAASWLLPNPNPKPIENTDLNSGKLEFLEMDPYLDLDYDRVDPKLE 180
           SDV+ DA    EEAEAASWLLPNPN K +++ D+NSG+  F EMDPYLDLDY   DPK++
Sbjct: 121 SDVDGDADVSREEAEAASWLLPNPNHKAVDSPDVNSGQYVFSEMDPYLDLDYGHGDPKMD 180

Query: 181 VREHNSSAADGVVPVQSKGVDLSSVNDRSFGIDFPCAKSFPYSYNPQSISHSVSSSSIEV 240
            +E NSS  DGVVPVQSK V   S ND  F +DF  +K F Y YNP  ISHSVSSSS++V
Sbjct: 181 AQEQNSSGTDGVVPVQSKNVQAPSANDHWFDLDFTGSKPFSYGYNPNFISHSVSSSSLDV 240

Query: 241 GVVPEGNTITEISNPYTKPSTESTVPPLQISPADREARVLRYREKRKNRKFEKTIRYASR 300
           GVVP+G+T+T+ISNPY +   EST   +Q+SPADREARVLRYREKRKNRKFEKTIRYASR
Sbjct: 241 GVVPDGSTMTDISNPYGR-GPESTHQTVQLSPADREARVLRYREKRKNRKFEKTIRYASR 300

Query: 301 KAYAEKRPRIKGRFAKRTDIELEADR--VSGYGVVPSF 334
           KAYAE RPRIKGRFAKRTDIE+E DR  + G+GVVPSF
Sbjct: 301 KAYAEMRPRIKGRFAKRTDIEVEVDRSNMYGFGVVPSF 335

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
COL4_ARATH4.4e-11161.20Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2[more]
COL3_ARATH4.3e-8255.19Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana GN=COL3 PE=1 SV=1[more]
COL5_ARATH2.5e-7449.28Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana GN=COL5 PE=2 SV=2[more]
COL1_ARATH1.1e-7247.29Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana GN=COL1 PE=1 SV=1[more]
COL2_ARATH4.6e-6847.34Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana GN=COL2 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LSP8_CUCSA2.0e-16387.24Uncharacterized protein OS=Cucumis sativus GN=Csa_2G383330 PE=4 SV=1[more]
A0A0D3R2E3_GOSDA7.6e-13474.26CONSTANS-like 5 protein OS=Gossypium darwinii PE=4 SV=1[more]
A0A0D3R2R5_GOSHI7.6e-13474.26CONSTANS-like 5 protein OS=Gossypium hirsutum PE=4 SV=1[more]
A0A0D3R297_GOSHI7.6e-13474.26CONSTANS-like 5 protein OS=Gossypium hirsutum var. marie-galante PE=4 SV=1[more]
A0A0D3R2X2_GOSHE7.6e-13474.26CONSTANS-like 5 protein OS=Gossypium herbaceum subsp. africanum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G24930.12.5e-11261.20 CONSTANS-like 4[more]
AT2G24790.12.4e-8355.19 CONSTANS-like 3[more]
AT5G57660.11.4e-7549.28 CONSTANS-like 5[more]
AT5G15850.16.0e-7447.29 CONSTANS-like 1[more]
AT3G02380.12.6e-6947.34 CONSTANS-like 2[more]
Match NameE-valueIdentityDescription
gi|449441842|ref|XP_004138691.1|2.9e-16387.24PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis sativus][more]
gi|659089027|ref|XP_008445288.1|6.5e-16387.24PREDICTED: zinc finger protein CONSTANS-LIKE 4 [Cucumis melo][more]
gi|728845631|gb|KHG25074.1|1.1e-13374.26Zinc finger CONSTANS-LIKE 4 -like protein [Gossypium arboreum][more]
gi|765198897|gb|AJR28784.1|1.4e-13374.26CONSTANS-like 5 protein [Gossypium barbadense][more]
gi|765198889|gb|AJR28780.1|1.9e-13374.26CONSTANS-like 5 protein [Gossypium hirsutum subsp. latifolium][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000315Znf_B-box
IPR010402CCT_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh12G003770.1CmaCh12G003770.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 46..91
score: 2.4E-6coord: 4..43
score: 3.
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 1..48
score: 3.0E-13coord: 49..91
score: 7.
IPR000315B-box-type zinc fingerPROFILEPS50119ZF_BBOXcoord: 44..91
score: 10.637coord: 1..48
score: 10
IPR010402CCT domainPFAMPF06203CCTcoord: 272..314
score: 1.2
IPR010402CCT domainPROFILEPS51017CCTcoord: 272..314
score: 16
NoneNo IPR availablePANTHERPTHR31319FAMILY NOT NAMEDcoord: 1..333
score: 1.4E
NoneNo IPR availablePANTHERPTHR31319:SF6SUBFAMILY NOT NAMEDcoord: 1..333
score: 1.4E