Cp4.1LG06g06040 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG06g06040
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionF-box protein SKIP31
LocationCp4.1LG06 : 3711305 .. 3715228 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTGTGCAGCTGTGGTGAGTCCTCACCTACCATGGTTCCTGTGATTTCGGGCGAGTTACTGGGGGTCGATCGTCATTCTAAAGGCCGGGACTGCCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCAGATCGCTGCAGGAGTTCGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAATTTCTTGAAACAGAGGTTCTCTTGGAGGTCTCTGATAAGGTTTCTACCTCTTTCCTCTCTCTATTTCTCCGATACTCTTTGTGGAGTTGGAGCGGTTGGTATTTAGGAGAATTAAGGCGTATCGTTCAAACATGTTCGTTTGTTTCTTCAAATCTTATCATGTTCATGCCGATTTTGGGTGAACTACGTCGGATGGTGATGAATTTGAGTGCGGATATTTGTAGGAAGAGGGGAACGTACAGGAGGAACCACAACCTAAAAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTAGCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTCAAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGTATTGTGAAGAGGAGTTGTATTCTTCCTACTTCGTATGATCCTCCCCATTTTTGTTCTCACTGAACTGTTTGTTTTGATGCAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTGTAAGTGATTGCTTCTGATATTTCTCCATCTATCTGTGTTTGATCTGTACGCTACTCTATGGCGAAAAGCTAATTGGTTTTCCATTTTCTACGAACACTTAAGCCTGCAATTCGTGTACAGATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGGTTCTTCTTTCACCTTTTGTTAAGAAATGATCCTAAATCCTGTTGTTTGAAATAGAAGAAATGGTTCTGAATTCATTATCCTGTTTGAAACGGAAACGATTTGAAGAAATGAGAGCAATTACATTCTTTTTGTTAGGAAAACAAAATAAGAACTTCACTACTTCACTAATATAGGCTTCTAAACTACCACCACTGAAAACATTGTTAAAGTACTTTTACGAGAAGGTTCTATCGAAAACATAAGGGAAAACAACAAGGATTTTTGGGTTTTAACCGTACGACATAGAAGAAATAGGAAATGACCATATAAAACGATTTTAAATTTAAAACCGACCAGACTTGGTCTCCAAATCTATTCTAACTATCAACAATTCCTAGAATTTTAGGCAGAATGGGATTTGTAATTCGTTCTACTTCTAGGGGTATAATGACAGATCGAGAAGCTCGACTTCAGGGAATCGGCGGAGAAATTTTGTGTCTGTTGAAAGAAAATTAAGATATGATAAGTTTAAATGAATGATTTACTCAAAATTATATGAAATCTAACACACAACAAAATCTGTTAAGATTTAAGAGCTTTATACATCATTCTATGGGTTCCTGCGTGCGGCTGTCTATTCATTTTTTGTTAAGGGGTATACCTGTTTTGTTAGTTGATTTTATACCCATTTTAGTGATGAACACTCATCACCCATTTTTGCTATCATCTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGTCTGATTTTCTCACAAGCTTTTAACGCTGCAAAAGAATTGCCCATATAGTTTCGGTTTCTATATTCTCGTGTTTAAAGACAGGGTTGAATGATGGTTCATGCAAGTTTCTTGTATAGTTTTGTTTTCTGGTTTTGTCCTAGGCTATCTCCATCCTTAGTCTTTACGAATTTGATTTTTCTGGTAACTAAAGAAAAAAACTATTGAGCGTTTGCAGGTGCAGGACGACCAAATAATTCTCGACAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGGTAAGATATTGTTCTATCTTTTATATCCATTTTTTGTTGTAGATTGCCCTATGACTTCAGTACCTGTGTAATTGATGAGTCGCACGTTTTTTTACCCTAGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACTCTACTTTTTCCAGACTCTATGGAACCGGATACTGTGAGTACAACCTTCCTTCATTTGTTACCAACCTTGACTTGTCTGCTCTTCCTTCTGCTATCTAACATTCTTAACTTCCTATCCGAGGGCTCCTGACCCACTACTGAAAATAGAGCGAGACTAGAAATGGGCTCTTTTAATATTAATACTATAACAGCCCAAGTCCACCGCTAGCTGACATTGTCCGCTTTGGCACGTTATATATCCCTGTTAGCCTCACGGTTTTAAAATGCGTCTACTATGGAGAGAGTCTAGCTCTACTCCAACCAGTGTCTTGCACTGTTTGGTGACTGGCTTTGATACCATTTATAACAACTCAAGCTCATCGCTAGTAGATATTGTCCGCTTTGGCCCATTACGTGTCGTCGTCAGCTTCACAGTTTTAAAACGCGTTAACTATGGAGAGGTTTCCACACCCTTATAAAGAAGTTTTGTTTCCCTCTCCAACTGACGTGGGATATTACAATCCACCCCCTTGGGCCCCAGCGTCCTCGCTGGCACATCGCTCGATGTCTGGCTCTGATACCATTTGTAGTTGTCCAAGCTCACCGCTAGTAGATATTGTCCATTTTGGCCTGTTATGTGTAGCCGTTAGCTTCACGGTTTTATAACACGTCAACTAGGGAGAGGTTTTTACACCCTTATAAAGAAGTTTTGTTCCACTCTCCAACCGATGTGGGATCTCACAAATTATGTAATAAATTGAGTCTTTATTTCTACAAATGGTACTTCAAACTTGAAACGAGCATGAATAAATCGATGATACTGTATATTGTACAAAGGTTCTTATCTGACCCCTTCATGCATTTTTATGTCTTGATAGATTTTTGTTCACCTCATTTTATGTACATCGAACTTGTAGGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCGTTCATGGGTTCGGGTCGTTTTGGTATAAAATCACGATCTATCCGTTGTTTATATTTTAGTAAACACACGTTTTTTTCTTTTTTCAGTAGAACAACTGAACTATGTTCATGTTGTCGAAGAATGCACGTTTTTAACTTATCTTAATATACAACAGCTCGAGCTTACTTGCTGGGGTACAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCCTGGATTATATTCCTGAATTTCATCATGTGTAGAAGTTTGTTAATTAAGTAATATATATCTTTTTGTCAGCTTTCTTCCCTTCCAAAACTCTCTTTCTCTCTCTCATCATTTGAAAGAGTTATGTTAGTGATGAAAATAGATAAAATGGCTATCTTTAGTGAATAAAAACACAAATTATAGTCTCGAACTCGAACGTCTTTCATCGTCACGACTATTTTCTTGTTTTTCCTTTTTGTTTGTGTCGGGCGTTAGCTAAAAGAA

mRNA sequence

TGTTGTGCAGCTGTGGTGAGTCCTCACCTACCATGGTTCCTGTGATTTCGGGCGAGTTACTGGGGGTCGATCGTCATTCTAAAGGCCGGGACTGCCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCAGATCGCTGCAGGAGTTCGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAATTTCTTGAAACAGAGGTTCTCTTGGAGGTCTCTGATAAGGAAGAGGGGAACGTACAGGAGGAACCACAACCTAAAAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTAGCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTCAAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGACAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACTCTACTTTTTCCAGACTCTATGGAACCGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCGTTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTACAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCCTGGATTATATTCCTGAATTTCATCATGTGTAGAAGTTTGTTAATTAAGTAATATATATCTTTTTGTCAGCTTTCTTCCCTTCCAAAACTCTCTTTCTCTCTCTCATCATTTGAAAGAGTTATGTTAGTGATGAAAATAGATAAAATGGCTATCTTTAGTGAATAAAAACACAAATTATAGTCTCGAACTCGAACGTCTTTCATCGTCACGACTATTTTCTTGTTTTTCCTTTTTGTTTGTGTCGGGCGTTAGCTAAAAGAA

Coding sequence (CDS)

ATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAATTTCTTGAAACAGAGGTTCTCTTGGAGGTCTCTGATAAGGAAGAGGGGAACGTACAGGAGGAACCACAACCTAAAAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTAGCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTCAAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGACAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACTCTACTTTTTCCAGACTCTATGGAACCGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCGTTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTACAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGA

Protein sequence

MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSSSQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC
Homology
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BLAST of Cp4.1LG06g06040 vs. Swiss-Prot
Match: SKI31_ARATH (F-box protein SKIP31 OS=Arabidopsis thaliana GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.5e-98
Identity = 186/330 (56.36%), Postives = 234/330 (70.91%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQ------INPNEQREVA 60
           M++SDEEDE  A+FLE+EV   V DKEE    +EP+ KR RIE+          +Q+E  
Sbjct: 1   MSVSDEEDECFARFLESEVS-SVEDKEE---TKEPEAKRQRIEKGETKALEKDEDQKENG 60

Query: 61  SVTTSSSQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDES 120
           +   + ++       RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DES
Sbjct: 61  NKDKTDAK-------RIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADES 120

Query: 121 LWRRLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRS 180
           LWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRS
Sbjct: 121 LWRRLYCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRS 180

Query: 181 QAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEK 240
           QAPLPSQ+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++
Sbjct: 181 QAPLPSQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKE 240

Query: 241 TGLVHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEP 300
           TG VHVCDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE 
Sbjct: 241 TGNVHVCDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEV 300

Query: 301 FMGSGRFARAYLLGYNCADEAELEATLRFC 325
           F    R ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 FTDKSRLARAFELGYNCDDEQELERTLRFC 316

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BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match: A0A0A0L1U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G358650 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 1.1e-161
Identity = 291/350 (83.14%), Postives = 306/350 (87.43%), Query Frame = 1 

Query: 6   EEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSSSQFSG 65
           E+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SSSQ  G
Sbjct: 66  EDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSSSQSKG 125

Query: 66  VVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWG 125
           VVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLYCLRWG
Sbjct: 126 VVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLYCLRWG 185

Query: 126 LVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 185
           ++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD
Sbjct: 186 MLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 245

Query: 186 QIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVH------ 245
           QIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVH      
Sbjct: 246 QIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHGMVFLF 305

Query: 246 -------------------------VCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDS 305
                                    VCDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+
Sbjct: 306 DILLSFISIKFCYILVSNFRHVFFLVCDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDA 365

Query: 306 MEPDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 325
           MEPDTE QQAG TD  EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC
Sbjct: 366 MEPDTEQQQAGGTD--EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 413

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BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match: A0A0B2R3T9_GLYSO (F-box protein SKIP31 OS=Glycine soja GN=glysoja_041786 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-134
Identity = 240/327 (73.39%), Postives = 274/327 (83.79%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           M +SD+EDE LAQFLE+EVL EVSDKEE NV EEP+ KRAR+E+    +Q++ +   ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-EEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SQF---SGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 +GVVP RIETG FSQIP ELF HILKFLSSEDL+SCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRD EDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVS+WKSSRGL+D +V DH CSGETC+YY +GD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMG 300
           VHVCDDTCREVVMDP +E LVC ISGHCFD LL P  MEPDTE QQ GVTD  EAEPFMG
Sbjct: 241 VHVCDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

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BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match: I1J879_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G154100 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 1.5e-134
Identity = 240/327 (73.39%), Postives = 274/327 (83.79%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           M +SD+EDE LAQFLE+EVL EVSDKEE NV EEP+ KRAR+E+    +Q++ +   ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-EEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SQF---SGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 +GVVP RIETG FSQIP ELF HILKFLSSEDL+SCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRD EDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVS+WKSSRGL+D +V DH CSGETC+YY +GD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMG 300
           VHVCDDTCREVVMDP +E LVC ISGHCFD LL P  MEPDTE QQ GVTD  EAEPFMG
Sbjct: 241 VHVCDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

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BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match: A0A0S3T3K7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G133900 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.0e-131
Identity = 233/327 (71.25%), Postives = 270/327 (82.57%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           M  S++EDE LAQFLE+EVL E SDKEE    EEP+ KR R E+    + +E++  + + 
Sbjct: 1   MTFSEDEDETLAQFLESEVLSEASDKEE-ETGEEPKAKRKRTEEDESTKGKEISDSSPAQ 60

Query: 61  SQF---SGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 + V+  RIETG FS++P ELF HILKFLSSEDL+SCSLVCRFLN  ASDESLWR
Sbjct: 61  KSMVVNNTVLQRRIETGCFSKVPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDESLWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWGL+P T+KLR+CPWKKLYIQRD EDM +LVR+C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
           LPSQ++DD+IILD+T+ADQV++WKSSRGL+D +V DHTCSGE C+YYQ+GD F+CEKTG 
Sbjct: 181 LPSQLKDDRIILDKTLADQVASWKSSRGLSDVVVADHTCSGENCSYYQIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMG 300
           VHVCDDTCREV+MDP +E LVC ISGHCFD LL P  MEPD E QQ GVTD  EAEPFMG
Sbjct: 241 VHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDAEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAYLLGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYLLGYNCADEKELEATLRFC 324

[Close]
BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match: A0A0L9URL2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066200 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 2.0e-131
Identity = 233/327 (71.25%), Postives = 270/327 (82.57%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           M  S++EDE LAQFLE+EVL E SDKEE    EEP+ KR R E+    + +E++  + + 
Sbjct: 1   MTFSEDEDETLAQFLESEVLSEASDKEE-ETGEEPKAKRKRTEEDESTKGKEISDSSPAQ 60

Query: 61  SQF---SGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 + V+  RIETG FS++P ELF HILKFLSSEDL+SCSLVCRFLN  ASDESLWR
Sbjct: 61  KSMVVNNTVLQRRIETGCFSKVPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDESLWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWGL+P T+KLR+CPWKKLYIQRD EDM +LVR+C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
           LPSQ++DD+IILD+T+ADQV++WKSSRGL+D +V DHTCSGE C+YYQ+GD F+CEKTG 
Sbjct: 181 LPSQLKDDRIILDKTLADQVASWKSSRGLSDVVVADHTCSGENCSYYQIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMG 300
           VHVCDDTCREV+MDP +E LVC ISGHCFD LL P  MEPD E QQ GVTD  EAEPFMG
Sbjct: 241 VHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDAEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAYLLGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYLLGYNCADEKELEATLRFC 324

[Close]
BLAST of Cp4.1LG06g06040 vs. TAIR10
Match: AT5G45360.1 (AT5G45360.1 F-box family protein)

HSP 1 Score: 360.1 bits (923), Expect = 1.4e-99
Identity = 186/330 (56.36%), Postives = 234/330 (70.91%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQ------INPNEQREVA 60
           M++SDEEDE  A+FLE+EV   V DKEE    +EP+ KR RIE+          +Q+E  
Sbjct: 1   MSVSDEEDECFARFLESEVS-SVEDKEE---TKEPEAKRQRIEKGETKALEKDEDQKENG 60

Query: 61  SVTTSSSQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDES 120
           +   + ++       RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DES
Sbjct: 61  NKDKTDAK-------RIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADES 120

Query: 121 LWRRLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRS 180
           LWRRLYC+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRS
Sbjct: 121 LWRRLYCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRS 180

Query: 181 QAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEK 240
           QAPLPSQ+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++
Sbjct: 181 QAPLPSQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKE 240

Query: 241 TGLVHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEP 300
           TG VHVCDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE 
Sbjct: 241 TGNVHVCDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEV 300

Query: 301 FMGSGRFARAYLLGYNCADEAELEATLRFC 325
           F    R ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 FTDKSRLARAFELGYNCDDEQELERTLRFC 316

[Close]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match: gi|778694225|ref|XP_011653768.1| (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus])

HSP 1 Score: 600.1 bits (1546), Expect = 2.3e-168
Identity = 295/324 (91.05%), Postives = 310/324 (95.68%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           MAI DE+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+MEPDTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 322

[Close]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match: gi|659086994|ref|XP_008444220.1| (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo])

HSP 1 Score: 595.9 bits (1535), Expect = 4.2e-167
Identity = 293/324 (90.43%), Postives = 309/324 (95.37%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           MAI DE+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+MEPDTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 322

[Close]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match: gi|778694236|ref|XP_011653769.1| (PREDICTED: F-box protein SKIP31 isoform X2 [Cucumis sativus])

HSP 1 Score: 592.0 bits (1525), Expect = 6.1e-166
Identity = 293/324 (90.43%), Postives = 308/324 (95.06%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           MAI DE+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q  DDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 Q--DDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+MEPDTE QQAG TDE  AEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDAMEPDTEQQQAGGTDE--AEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 320

[Close]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match: gi|659086996|ref|XP_008444221.1| (PREDICTED: F-box protein SKIP31 isoform X2 [Cucumis melo])

HSP 1 Score: 587.8 bits (1514), Expect = 1.2e-164
Identity = 291/324 (89.81%), Postives = 307/324 (94.75%), Query Frame = 1 

Query: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60
           MAI DE+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q  DDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 Q--DDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+MEPDTE QQAG TDE  AEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTDE--AEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 320

[Close]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match: gi|700199369|gb|KGN54527.1| (hypothetical protein Csa_4G358650 [Cucumis sativus])

HSP 1 Score: 577.4 bits (1487), Expect = 1.6e-161
Identity = 291/350 (83.14%), Postives = 306/350 (87.43%), Query Frame = 1 

Query: 6   EEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSSSQFSG 65
           E+DE LAQFLE+EVL EVSDKEEGNVQEEP+PKRARIEQI+PNEQREV SVT+SSSQ  G
Sbjct: 66  EDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSSSQSKG 125

Query: 66  VVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWG 125
           VVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLYCLRWG
Sbjct: 126 VVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLYCLRWG 185

Query: 126 LVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 185
           ++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD
Sbjct: 186 MLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 245

Query: 186 QIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVH------ 245
           QIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVH      
Sbjct: 246 QIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHGMVFLF 305

Query: 246 -------------------------VCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDS 305
                                    VCDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+
Sbjct: 306 DILLSFISIKFCYILVSNFRHVFFLVCDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDA 365

Query: 306 MEPDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 325
           MEPDTE QQAG TD  EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC
Sbjct: 366 MEPDTEQQQAGGTD--EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 413

The following BLAST results are available for this feature:
BLAST of Cp4.1LG06g06040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SKI31_ARATH2.5e-9856.36F-box protein SKIP31 OS=Arabidopsis thaliana GN=SKIP31 PE=1 SV=1[more]
BLAST of Cp4.1LG06g06040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1U0_CUCSA1.1e-16183.14Uncharacterized protein OS=Cucumis sativus GN=Csa_4G358650 PE=4 SV=1[more]
A0A0B2R3T9_GLYSO1.5e-13473.39F-box protein SKIP31 OS=Glycine soja GN=glysoja_041786 PE=4 SV=1[more]
I1J879_SOYBN1.5e-13473.39Uncharacterized protein OS=Glycine max GN=GLYMA_01G154100 PE=4 SV=1[more]
A0A0S3T3K7_PHAAN2.0e-13171.25Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G133900 PE=... [more]
A0A0L9URL2_PHAAN2.0e-13171.25Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g066200 PE=4 SV=1[more]
BLAST of Cp4.1LG06g06040 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G45360.11.4e-9956.36 F-box family protein[more]
BLAST of Cp4.1LG06g06040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778694225|ref|XP_011653768.1|2.3e-16891.05PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus][more]
gi|659086994|ref|XP_008444220.1|4.2e-16790.43PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo][more]
gi|778694236|ref|XP_011653769.1|6.1e-16690.43PREDICTED: F-box protein SKIP31 isoform X2 [Cucumis sativus][more]
gi|659086996|ref|XP_008444221.1|1.2e-16489.81PREDICTED: F-box protein SKIP31 isoform X2 [Cucumis melo][more]
gi|700199369|gb|KGN54527.1|1.6e-16183.14hypothetical protein Csa_4G358650 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG06g06040.1Cp4.1LG06g06040.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 77..121
score: 3.3
IPR001810F-box domainSMARTSM00256fbox_2coord: 79..119
score: 5.
IPR001810F-box domainPROFILEPS50181FBOXcoord: 73..119
score: 14
IPR001810F-box domainunknownSSF81383F-box domaincoord: 61..145
score: 6.41
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 76..151
score: 1.5
NoneNo IPR availablePANTHERPTHR22990F-BOX ONLY PROTEINcoord: 1..324
score: 3.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG06g06040CmaCh09G007650Cucurbita maxima (Rimu)cmacpeB060
Cp4.1LG06g06040CmaCh01G013610Cucurbita maxima (Rimu)cmacpeB503
Cp4.1LG06g06040CmoCh09G007560Cucurbita moschata (Rifu)cmocpeB034
Cp4.1LG06g06040CmoCh01G014130Cucurbita moschata (Rifu)cmocpeB461
Cp4.1LG06g06040Cla023199Watermelon (97103) v1cpewmB776
Cp4.1LG06g06040Csa4G358650Cucumber (Chinese Long) v2cpecuB784
Cp4.1LG06g06040MELO3C010523Melon (DHL92) v3.5.1cpemeB730
Cp4.1LG06g06040ClCG11G016070Watermelon (Charleston Gray)cpewcgB695
Cp4.1LG06g06040CSPI04G17430Wild cucumber (PI 183967)cpecpiB786
Cp4.1LG06g06040Lsi04G018440Bottle gourd (USVL1VR-Ls)cpelsiB639
Cp4.1LG06g06040MELO3C010523.2Melon (DHL92) v3.6.1cpemedB863
Cp4.1LG06g06040CsaV3_4G027900Cucumber (Chinese Long) v3cpecucB0971
Cp4.1LG06g06040Bhi09G002284Wax gourdcpewgoB0998
Cp4.1LG06g06040CsGy4G016630Cucumber (Gy14) v2cgybcpeB564
Cp4.1LG06g06040Carg20080Silver-seed gourdcarcpeB1455
Cp4.1LG06g06040Carg00308Silver-seed gourdcarcpeB0947
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG06g06040Cp4.1LG02g03030Cucurbita pepo (Zucchini)cpecpeB468
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG06g06040Cucumber (Chinese Long) v3cpecucB0973
Cp4.1LG06g06040Cucumber (Chinese Long) v3cpecucB0978
Cp4.1LG06g06040Wax gourdcpewgoB0979
Cp4.1LG06g06040Cucurbita pepo (Zucchini)cpecpeB229
Cp4.1LG06g06040Cucumber (Chinese Long) v2cpecuB790
Cp4.1LG06g06040Cucumber (Gy14) v2cgybcpeB566
Cp4.1LG06g06040Cucumber (Gy14) v2cgybcpeB570
Cp4.1LG06g06040Cucumber (Gy14) v2cgybcpeB869