Carg00308 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg00308
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein SKIP31
Location	Cucurbita_argyrosperma_scaffold_001 : 1692313 .. 1696657 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGATTTCGGGTGGGTTATTGGGGGTCGGTTGTCGTTCTAAAGGCCGGAACTGCCGGCTGCCAGCTCCGGTCACCGGACGACGCAGGTTATTTAGTGGTCTATTCAGTGTTCACGATCCGATCGTTGCTGGAGTTTGGAAATCCCGCTGCTTGATGTGAAATGTCCATTCCAGATGAAGAAGACGAGTTCTTAGCTCAATTCATCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGTTTGTATTGCTTGCCGTTCTCATTCGTCGATGTTGTTTGTCGAGTTTGACTGGGATTAGGGCGTATAGTTTGTATATGTTCGTTGGTTTCTCCAAATTTTATCATGTTGATGCCGATTTAGGGTCAATTACGTCGGACGATGATGAATCTGAGTGCGGATTTTTGTAGGAAGAGGGGAACAGGGAGGAGGAACCAAAACCTAAGAGAGCTCGAATCGAACAAATTAGCCCTAACGAACAAAGAGAGGTAGCTTCGGTCACTACTTCGTCCTCTCAATCACAATCCAAGGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAGTTCCTCCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGTATTGTGAAAAGGTTTTTTTTATTTTTGCATACTCCATCTCCATTTTTGTTTTTCACTTCGTCATTTGGTGCAGGATCTGGTTTCTTGTTCACTGGTTTGTCGTTTTTTAAACTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTGTGAGTAATGCCATCTTATTTATCCTATCTATCTGTGTTTGATCTGCATGCTACTCTACGGCGCAACGTTAATTGGTTTTCCTCTGTAAAGTCTCATCTTGTGTGTTGGCCGAAGTGACAATAGTCACATTGAACCCTAGAATATGTTCGAACCTTGTTACCACAGGGAACATATTGTAATATCTCTAAATATCTACTAACACACTTCGCCTGCAACTCGTTTGCAGATATTGTCTACGATGGGGTCTGATGCCCGCGACCAAGAAGTTGCGCCAATGTCCTTGGAAAAAACTTTACATTCAGGTTCTTCTCTTACCCTAAATCTGCCATTCGAAATAAAAGAAACGATTATAAATTCTTATATTGTTTGGAAGAGAAAAGATTTGAAATGAATGCACTTACATTCTTTTTGTTTGGATGTTAGTCGAAACGAAAAGAAAATAAAAAAAAAGTTTATTTATTAAAAGATGATTAGGAAGTGGTTTGCTCAAAATTGTATGAAATCTAATGAGAAACAAAAGCCAGTATGATTTGAAATCATTCCTAGCAAGAAAGAAATTTGTATACTGATTCTCTTAAATCTGTATCACTCTGGATCTTGGAGTACTTTGGAAGGCTCCTTCTCGCAGCAATATATTCATCTTGTTAGCTGATTTTATTCCCCTCTTGGTAATGTACTAATCACCCATCTTTTCTTTCATCCCAGCGTGACGGAGAAGATATGACTCAACTGGTTCGAGATTGCTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTATCTGATTTTCTCACAAGCTCGTATCGCTGCTAAAGAATCACCCATATTGTTTCTGGTTCTTTATCCTTATGTTTTAAGAAAGGGTTGAATAAATGTTCATGCATGGTTGCTTGAAACCCAACACATAGTTTCTTTTATAGATTTGTTTTTTGGGTTTATCCAAGGCTATCTCCCTCCCTCCCTCCTTAGTAAGAATAGCTTTTTTTCACTTTTTTTAGGAGTCTTCCTTGTGGAGGTCTCTCAGGTGTCTACGTAGAGCGTTAAGACCTAGAATTGAAGAACGTCTGTAGGCAGATATTAGCTTGGCAACTAATTCTATTTTTTTGGTAACGGAAAAAAAAAAAAAAAAAAACAAAACAAAACAATTGGGCATTTGCAGGTGCAGGATGACCAAATAATTCTTGACAGGACTGTGGCTGATCAAGTATCTTCATGGAAAAGTAGCAAGGGCTTGGCTGACAAGATAGTCATAGATCACACTTGCTCTGGAGAAACTTGTACATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGGTAGGATAGTCCTTTCTCTTTTATATTGAAATTTTGTTTTGGATTATCCAGTGGCTTTAGTACCCGTGTAATTGATGAGTCGCATGTTTTCTTCCTAGTATGCGATGATACGTGCAGAGAAGTCATTATGGATCCCGATGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATAATCTGCTTTTGCCAGATTCTATGGAACCGGATTCGGTGAGTACAAACCTCTTTCAAACGTTACCGACCTTGATGAGTCTGATCTTTCTGCTGCTATCTAACTTCCTATCAGAGGGCTCGCTACTGAAAACAGAGTGAGACTATAAATGGGATTTTTTTTATCACTCGAGTAAAATTAAATGGTAGAGATTTCGTAGCCAACTTTAGATTAAGCTTCTTCACATTTTTGTCTGTTTTGAAGTTCTCAGTGGATTCCACTACTAATTTAAGTTCCTTTATGTTAAATTATCAGCAGGCTTAAGCTATGAGGTCAACATAATTTAATTGTTGAACAACTTTTTGGCACTTCTCTTCACATTTAGGTTCGAGTATTCGGTTGATTTAATAGAGAATCTGAAATTATGACTTCATGTTTTGATACCCAATGCTTATGCTGTTTGGACTAGAAGTACTTCAATCATATATTCTCAGCACTCCTCACATATAGGTGTTGGAATGAACCACAAGGTCAAGCATGTAGACATATGAAATGATGGAGAAAATAACATTGCGAGAATTTCAATTTATTATTCCAATACCTTGTTTAATCACTACGTTTAAATTATTATTATTACACATGTATGTCTAGTTTAGTTCATTTTCCCCTTTCTATTCTTAATTTTCCGGAGGCTTTTGTTCGTCGAGCTTTTGTATATTCTTTTTAGGACTTTGTCTGTCTGCTTGCATCTTTCTGAGCCCGAAAATGGATGTTGAACAGTTTTGGATTGATAGAACTGCGCAATCAGTGTATAGGCTATCATTTTTGGTGCCAAATTACTGACCTTGGTCTGGTGTGGTCAATGCTTCTCCCTGCATTTTTTCTCTTCTTCCAATGACTTCTAATCATCCAATATCATAAATTTTCGGCCTATGATTTATTATATAACTTGGATCCTTCGATCAACTCCATCCAACTTCATTAATCTCTCTTGATCCCTCGCTGTTTTGTGATATTCGTTGTTCTCTTTGAGATATAACACTCAGCTCTTTTAAATTCTTGTTCATAATGCTTAGTATCTGATCTGTTCACATCGTGAATCATTGGAACGTCATTTGTATGCCTTCATCTTGTGGAAGGTTTGTTCTGTGTGTTCATTTCTGTTCTACACCTCATGTGGAATGTATATCGCAAACTTTCAGGAACAGCAACTAGCAGGTGTAACCGATGAGGCGGAGGCAGAACCATTCATGGGTTCGGGCCGTTTTGGTAAACAATAACAATCTATCTTTTTTCTCTTATTGTTATCGTTTCGAAATGAGAAATGCATATATTATACGAGAGATATTAATATTAATTTGTTGCAGCTCGAGCTTACTTGCTGGGATACAACTGTGCTGATGAGGCAGAGCTAGAAGCTACATTGAGGTTTTGCTGATATTCAGAACTGGAACGAGTTTGTTGGGTTTGGGTGGTTGGAGCCTTTGTTTGATTGATTGAAAGAAAGAAACTCCTGCAGGTTCCAATTTTTGGAGAGAAAACTGCCTCTTTGACAGTACATGGTTTATATTAGTTATAATTTCATTGTGGAGTAGAAGTTTGTTAATTAGGTAACATATAATACATAATATACATCATCAACTGTCTTACATTCGGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTACTGTAAATTCCATGCTGCCCTCTGTTGATTGAACAAATTATGCATAAATTCTTTGGTATCTTAAGTGAGTCATGTAGTGTTCGCAATCTGATGAAAATGGACCAATTGGAAACAATTTTAAACCAGGCATCTGAAAGTGTGCGTGCATATATGTATATATATAAGAAATAAAGAAGGGCGAGGGTGACGGCCTTGATTGGGTGCCTGTCTAAGATCCTCTCGGGCTCGGGGGCCTTTGCTTGAATTATGCACAGGGCCAAAAGAGTGTGTGCGTTTATTTGTTATGGACGACCACAGTCCCGACCTTACCAACATTAAGAAGTTTACTAATAAATGAATTCCC

mRNA sequence

GTGATTTCGGGTGGGTTATTGGGGGTCGGTTGTCGTTCTAAAGGCCGGAACTGCCGGCTGCCAGCTCCGGTCACCGGACGACGCAGGTTATTTAGTGGTCTATTCAGTGTTCACGATCCGATCGTTGCTGGAGTTTGGAAATCCCGCTGCTTGATGTGAAATGTCCATTCCAGATGAAGAAGACGAGTTCTTAGCTCAATTCATCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGAAGAGGGGAACAGGGAGGAGGAACCAAAACCTAAGAGAGCTCGAATCGAACAAATTAGCCCTAACGAACAAAGAGAGGTAGCTTCGGTCACTACTTCGTCCTCTCAATCACAATCCAAGGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAGTTCCTCCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGGTTTCTTGTTCACTGGTTTGTCGTTTTTTAAACTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTACGATGGGGTCTGATGCCCGCGACCAAGAAGTTGCGCCAATGTCCTTGGAAAAAACTTTACATTCAGCGTGACGGAGAAGATATGACTCAACTGGTTCGAGATTGCTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGATGACCAAATAATTCTTGACAGGACTGTGGCTGATCAAGTATCTTCATGGAAAAGTAGCAAGGGCTTGGCTGACAAGATAGTCATAGATCACACTTGCTCTGGAGAAACTTGTACATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGCGATGATACGTGCAGAGAAGTCATTATGGATCCCGATGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATAATCTGCTTTTGCCAGATTCTATGGAACCGGATTCGGAACAGCAACTAGCAGGTGTAACCGATGAGGCGGAGGCAGAACCATTCATGGGTTCGGGCCGTTTTGCTCGAGCTTACTTGCTGGGATACAACTGTGCTGATGAGGCAGAGCTAGAAGCTACATTGAGGTTTTGCTGATATTCAGAACTGGAACGAGTTTGTTGGGTTTGGGTGGTTGGAGCCTTTGTTTGATTGATTGAAAGAAAGAAACTCCTGCAGGTTCCAATTTTTGGAGAGAAAACTGCCTCTTTGACAGTACATGGTTTATATTAGTTATAATTTCATTGTGGAGTAGAAGTTTGTTAATTAGGTAACATATAATACATAATATACATCATCAACTGTCTTACATTCGGACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTACTGTAAATTCCATGCTGCCCTCTGTTGATTGAACAAATTATGCATAAATTCTTTGGTATCTTAAGTGAGTCATGTAGTGTTCGCAATCTGATGAAAATGGACCAATTGGAAACAATTTTAAACCAGGCATCTGAAAGTGTGCGTGCATATATGTATATATATAAGAAATAAAGAAGGGCGAGGGTGACGGCCTTGATTGGGTGCCTGTCTAAGATCCTCTCGGGCTCGGGGGCCTTTGCTTGAATTATGCACAGGGCCAAAAGAGTGTGTGCGTTTATTTGTTATGGACGACCACAGTCCCGACCTTACCAACATTAAGAAGTTTACTAATAAATGAATTCCC

Coding sequence (CDS)

ATGTCCATTCCAGATGAAGAAGACGAGTTCTTAGCTCAATTCATCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGAAGAGGGGAACAGGGAGGAGGAACCAAAACCTAAGAGAGCTCGAATCGAACAAATTAGCCCTAACGAACAAAGAGAGGTAGCTTCGGTCACTACTTCGTCCTCTCAATCACAATCCAAGGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAGTTCCTCCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGGTTTCTTGTTCACTGGTTTGTCGTTTTTTAAACTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTACGATGGGGTCTGATGCCCGCGACCAAGAAGTTGCGCCAATGTCCTTGGAAAAAACTTTACATTCAGCGTGACGGAGAAGATATGACTCAACTGGTTCGAGATTGCTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGATGACCAAATAATTCTTGACAGGACTGTGGCTGATCAAGTATCTTCATGGAAAAGTAGCAAGGGCTTGGCTGACAAGATAGTCATAGATCACACTTGCTCTGGAGAAACTTGTACATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGCGATGATACGTGCAGAGAAGTCATTATGGATCCCGATGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATAATCTGCTTTTGCCAGATTCTATGGAACCGGATTCGGAACAGCAACTAGCAGGTGTAACCGATGAGGCGGAGGCAGAACCATTCATGGGTTCGGGCCGTTTTGCTCGAGCTTACTTGCTGGGATACAACTGTGCTGATGAGGCAGAGCTAGAAGCTACATTGAGGTTTTGCTGA

Protein sequence

MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSSSQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRRLYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC

Homology

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BLAST of Carg00308 vs. NCBI nr
Match: XP_022940889.1 (F-box protein SKIP31-like [Cucurbita moschata])

HSP 1 Score: 649.0 bits (1673), Expect = 8.3e-183
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQI+PNEQREVASVTTSS
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
           SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGLMP TKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPVTKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDS EPDSEQQLAGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSTEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of Carg00308 vs. NCBI nr
Match: XP_022981027.1 (F-box protein SKIP31-like [Cucurbita maxima])

HSP 1 Score: 646.7 bits (1667), Expect = 4.1e-182
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQI+PNEQREVASVTTS 
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSF 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
           SQSQSKGVVPGRIETGIFSKVP ELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPLELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of Carg00308 vs. NCBI nr
Match: XP_023525836.1 (F-box protein SKIP31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644.8 bits (1662), Expect = 1.6e-181
Identity = 323/326 (99.08%), Postives = 324/326 (99.39%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQI+PNEQREVASVTTSS
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
             SQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR
Sbjct: 61  --SQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg00308 vs. NCBI nr
Match: XP_011653768.1 (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus])

HSP 1 Score: 596.7 bits (1537), Expect = 4.9e-167
Identity = 295/326 (90.49%), Postives = 312/326 (95.71%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           M+IPDE+DEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQISPNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
             SQSKGVVPGRIE+GIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNS ASDESLWRR
Sbjct: 61  --SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWG++P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRT+ADQVS+WKSS+GL DKIV+DHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDP+DEQLVC ISGHCFD LLLPD+MEPD+EQQ AG TD  EAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDAMEPDTEQQQAGGTD--EAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg00308 vs. NCBI nr
Match: XP_008444220.1 (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo])

HSP 1 Score: 595.9 bits (1535), Expect = 8.3e-167
Identity = 294/326 (90.18%), Postives = 313/326 (96.01%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           M+IPDE+DEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQISPNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
             SQSKGVVPGRIE+GIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNS ASDESLWRR
Sbjct: 61  --SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWG++P +KKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRT+ADQVS+WKSS+GL DKIV+DHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDP+DEQLVC ISGHCFD+LLLPD+MEPD+EQQ AG TD  EAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg00308 vs. TAIR10
Match: AT5G45360.1 (F-box family protein)

HSP 1 Score: 359.0 bits (920), Expect = 3.1e-99
Identity = 190/326 (58.28%), Postives = 228/326 (69.94%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           MS+ DEEDE  A+F+ESEV S V DKEE    +EP+ KR RIE+    E + +       
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK---GETKALEKDEDQK 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
                      RIE+G+F+ VP ELFRHILKFLSSEDLVSCSLVC+FLN  A+DESLWRR
Sbjct: 61  ENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYC+RWGL   ++KLR+  WKKLYI RD +DM +LVR C S+FKEYY+ MQAAKRSQAPL
Sbjct: 121 LYCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQ+ DD+IILD TV +QVS WK SKGL DK V  H C G  C+Y+QI D F+C++TG V
Sbjct: 181 PSQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDD C+EVI+ P+ + +VC ISG C D LL+    EPD++        E EAE F   
Sbjct: 241 HVCDDNCKEVILSPEGDLMVCTISGVCSDTLLV--QTEPDADGCYEEEA-ELEAEVFTDK 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
            R ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 SRLARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of Carg00308 vs. Swiss-Prot
Match: sp|Q9FHK0|SKI31_ARATH (F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 5.6e-98
Identity = 190/326 (58.28%), Postives = 228/326 (69.94%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           MS+ DEEDE  A+F+ESEV S V DKEE    +EP+ KR RIE+    E + +       
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK---GETKALEKDEDQK 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
                      RIE+G+F+ VP ELFRHILKFLSSEDLVSCSLVC+FLN  A+DESLWRR
Sbjct: 61  ENGNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYC+RWGL   ++KLR+  WKKLYI RD +DM +LVR C S+FKEYY+ MQAAKRSQAPL
Sbjct: 121 LYCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQ+ DD+IILD TV +QVS WK SKGL DK V  H C G  C+Y+QI D F+C++TG V
Sbjct: 181 PSQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDD C+EVI+ P+ + +VC ISG C D LL+    EPD++        E EAE F   
Sbjct: 241 HVCDDNCKEVILSPEGDLMVCTISGVCSDTLLV--QTEPDADGCYEEEA-ELEAEVFTDK 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
            R ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 SRLARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of Carg00308 vs. TrEMBL
Match: tr|A0A1S3B9V0|A0A1S3B9V0_CUCME (F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 5.5e-167
Identity = 294/326 (90.18%), Postives = 313/326 (96.01%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           M+IPDE+DEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQISPNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
             SQSKGVVPGRIE+GIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNS ASDESLWRR
Sbjct: 61  --SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWG++P +KKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PSQVQDDQIILDRT+ADQVS+WKSS+GL DKIV+DHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDP+DEQLVC ISGHCFD+LLLPD+MEPD+EQQ AG TD  EAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg00308 vs. TrEMBL
Match: tr|A0A1S3B9Y3|A0A1S3B9Y3_CUCME (F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 1.5e-164
Identity = 292/326 (89.57%), Postives = 311/326 (95.40%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSS 60
           M+IPDE+DEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQISPNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120
             SQSKGVVPGRIE+GIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNS ASDESLWRR
Sbjct: 61  --SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRR 120

Query: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWG++P +KKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240
           PS  QDDQIILDRT+ADQVS+WKSS+GL DKIV+DHTCSGETCTYYQIGDAFVCEKTGLV
Sbjct: 181 PS--QDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300
           HVCDDTCREVIMDP+DEQLVC ISGHCFD+LLLPD+MEPD+EQQ AG TD  EAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 327
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 320

[Close]

BLAST of Carg00308 vs. TrEMBL
Match: tr|A0A0A0L1U0|A0A0A0L1U0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358650 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 8.5e-160
Identity = 291/352 (82.67%), Postives = 307/352 (87.22%), Query Frame = 0


Query: 6   EEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVASVTTSSSQSQS 65
           E+DEFLAQF+ESEVLSEVSDKEEGN +EEPKPKRARIEQISPNEQREV SVT+SS  SQS
Sbjct: 66  EDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS--SQS 125

Query: 66  KGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRRLYCLR 125
           KGVVPGRIE+GIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNS ASDESLWRRLYCLR
Sbjct: 126 KGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLYCLR 185

Query: 126 WGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQ 185
           WG++P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQ
Sbjct: 186 WGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQ 245

Query: 186 DDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLVH---- 245
           DDQIILDRT+ADQVS+WKSS+GL DKIV+DHTCSGETCTYYQIGDAFVCEKTGLVH    
Sbjct: 246 DDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHGMVF 305

Query: 246 ---------------------------VCDDTCREVIMDPDDEQLVCRISGHCFDNLLLP 305
                                      VCDDTCREVIMDP+DEQLVC ISGHCFD LLLP
Sbjct: 306 LFDILLSFISIKFCYILVSNFRHVFFLVCDDTCREVIMDPNDEQLVCTISGHCFDTLLLP 365

Query: 306 DSMEPDSEQQLAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 327
           D+MEPD+EQQ AG TD  EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC
Sbjct: 366 DAMEPDTEQQQAGGTD--EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 413

[Close]

BLAST of Carg00308 vs. TrEMBL
Match: tr|I1J879|I1J879_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778591 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.6e-134
Identity = 240/327 (73.39%), Postives = 277/327 (84.71%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVA-SVTTS 60
           M++ D+EDE LAQF+ESEVLSEVSDKEE N  EEPK KRAR+E+    +Q++ + S++  
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEEN-VEEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SSQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWR 120
            +   + GVVP RIETG FS++PPELF HILKFLSSEDLVSCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRDGEDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVSSWKSS+GL+D +V DH CSGETC+YY IGD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMG 300
           VHV DDTCREV+MDP +E LVC ISGHCFD LL P  MEPD+EQQ  GVTD  EAEPFMG
Sbjct: 241 VHVXDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 327
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

[Close]

BLAST of Carg00308 vs. TrEMBL
Match: tr|A0A0B2R3T9|A0A0B2R3T9_GLYSO (F-box protein SKIP31 OS=Glycine soja OX=3848 GN=glysoja_041786 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 3.6e-134
Identity = 240/327 (73.39%), Postives = 277/327 (84.71%), Query Frame = 0


Query: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQISPNEQREVA-SVTTS 60
           M++ D+EDE LAQF+ESEVLSEVSDKEE N  EEPK KRAR+E+    +Q++ + S++  
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEEN-VEEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SSQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWR 120
            +   + GVVP RIETG FS++PPELF HILKFLSSEDLVSCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRDGEDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVSSWKSS+GL+D +V DH CSGETC+YY IGD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMG 300
           VHV DDTCREV+MDP +E LVC ISGHCFD LL P  MEPD+EQQ  GVTD  EAEPFMG
Sbjct: 241 VHVXDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 327
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

The following BLAST results are available for this feature:

BLAST of Carg00308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940889.1	8.3e-183	99.08	F-box protein SKIP31-like [Cucurbita moschata]	[more]
XP_022981027.1	4.1e-182	99.08	F-box protein SKIP31-like [Cucurbita maxima]	[more]
XP_023525836.1	1.6e-181	99.08	F-box protein SKIP31-like [Cucurbita pepo subsp. pepo]	[more]
XP_011653768.1	4.9e-167	90.49	PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus]	[more]
XP_008444220.1	8.3e-167	90.18	PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo]	[more]

BLAST of Carg00308 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45360.1	3.1e-99	58.28	F-box family protein	[more]

BLAST of Carg00308 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FHK0\|SKI31_ARATH	5.6e-98	58.28	F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1	[more]

BLAST of Carg00308 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9V0\|A0A1S3B9V0_CUCME	5.5e-167	90.18	F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
tr\|A0A1S3B9Y3\|A0A1S3B9Y3_CUCME	1.5e-164	89.57	F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
tr\|A0A0A0L1U0\|A0A0A0L1U0_CUCSA	8.5e-160	82.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358650 PE=4 SV=1	[more]
tr\|I1J879\|I1J879_SOYBN	3.6e-134	73.39	Uncharacterized protein OS=Glycine max OX=3847 GN=100778591 PE=4 SV=1	[more]
tr\|A0A0B2R3T9\|A0A0B2R3T9_GLYSO	3.6e-134	73.39	F-box protein SKIP31 OS=Glycine soja OX=3848 GN=glysoja_041786 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg00308-RA	Carg00308-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 81..121 e-value: 1.5E-7 score: 41.1
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 80..123 e-value: 2.4E-12 score: 46.4
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 75..121 score: 14.399
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 66..152 e-value: 7.5E-17 score: 63.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..68
None	No IPR available	PANTHER	PTHR22990:SF27	F-BOX PROTEIN SKIP31	coord: 60..239 coord: 241..326
None	No IPR available	PANTHER	PTHR22990	F-BOX ONLY PROTEIN	coord: 241..326
None	No IPR available	PANTHER	PTHR22990	F-BOX ONLY PROTEIN	coord: 60..239
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 66..147

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg00308	Cla023199	Watermelon (97103) v1	carwmB0672
Carg00308	Csa4G358650	Cucumber (Chinese Long) v2	carcuB0688
Carg00308	MELO3C010523	Melon (DHL92) v3.5.1	carmeB0673
Carg00308	ClCG11G016070	Watermelon (Charleston Gray)	carwcgB0647
Carg00308	CSPI04G17430	Wild cucumber (PI 183967)	carcpiB0699
Carg00308	Cucsa.018330	Cucumber (Gy14) v1	carcgyB0749
Carg00308	CmaCh01G013610	Cucurbita maxima (Rimu)	carcmaB0947
Carg00308	CmaCh09G007650	Cucurbita maxima (Rimu)	carcmaB0932
Carg00308	CmoCh01G014130	Cucurbita moschata (Rifu)	carcmoB0922
Carg00308	CmoCh09G007560	Cucurbita moschata (Rifu)	carcmoB0906
Carg00308	Lsi04G018440	Bottle gourd (USVL1VR-Ls)	carlsiB612
Carg00308	Cp4.1LG02g03030	Cucurbita pepo (Zucchini)	carcpeB0943
Carg00308	Cp4.1LG06g06040	Cucurbita pepo (Zucchini)	carcpeB0947
Carg00308	CsGy4G016630	Cucumber (Gy14) v2	carcgybB0663
Carg00308	MELO3C010523.2	Melon (DHL92) v3.6.1	carmedB0685
Carg00308	CsaV3_4G027900	Cucumber (Chinese Long) v3	carcucB0701
Carg00308	Cla97C11G222040	Watermelon (97103) v2	carwmbB0692
Carg00308	Bhi09G002284	Wax gourd	carwgoB0789

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg00308	Carg20080	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:

None