Carg20080 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20080
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box protein SKIP31
Location	Cucurbita_argyrosperma_scaffold_126 : 357181 .. 360986 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCCGATCGTTGCAGGAGTTTGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGTTTCTACCTCTTTCCTCTCTCTATTTCTCCGATATTCTTTGTGGAGTTGGAGCGGTTGGTATTTAGGAGAATTAAGGCGTATCGTTCAAACATGTTCGTTTGTTTCTTCAAATCTTATCATGTTCATGCCGATTTTGGGTGAACTACGTCGGATGGTGATGAATTTGAGTGCGGATATTTGTAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGTATTGTGAAGAGGAGTTATTTTTTCCTACTTCGTATGCTCCCTCCCCATTTCTGTTCTCACTGAACTGTTTGTTTTGATGCAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTGTAAGTAATTGCTTTTGATATTTCTCTATCTATCTGTGTTTGATCTGTACACTACTCTATGGCGAAAAGTTAATTGATTTCCCATTTTCTACGAACACTTAAGCCTGCAATTCGTGTACAGATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGGTTCTTCTTTCACCCTTTGTTAAGAAATGATCCTAAATCCTGTTATTTGAAATAGAAGAAATGGTTCTGAATTCATTATCCTGTTTGAAACGGAAAAGATTTGAAGAAATGAGAGCAATTACATTATTTTTGTTAGGAAAACAAAATAAGAACTTCACTACTTCACTAATATAGGCTTCTAAACTAGCTCCATTGAAAGAAAATAAAATTAGCACCACCGAAGACATTGTTAAAATACTTTTACGAGAAGGTTCTATTGAAAACATAAGGAAACATAGGGAAAACAACAAGGATTTTTGGGTTTTAACCCTACAAACATAGGGAAAACAACAAGGATTTTTGGGTTTTAACCCTACAAACATAGAAGAAATAGGAAAGGATCATATGAAATGATTTTAAATTTAAAACGGATCAGTGGACTCTATTCTAATATCAACAAATTCCTAGAACTTTAAGTGGAATGGGCATTGTAGTTCTTTCTACTTCTTGGGGTATAATGACAGATCGAGAAGCCCGACTATAGGGAATCGGCAGAGGCGGAGAAATTTTGTATCTGTTGAAAGAAAATTAAGATATGATAAGTTTAAATGAATGATTTACTCAAAATTATAGGAAATCTAACACACAACAAAATCTGTTAAGATTTAAGAGCTTTATACATCATTCTATGGGTTCCTGCCTGCGGTTGTATATTCATTTTTTGTTTAGGGCTCTGACTGTTTTGTTAGTTGGTTTTATACCCATCTTAGTGATGAACACTCATCACCCATTTTTGCTATCACCTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGTCTGATTTTCTCACAAGCTTTTAACGCTGCAAAAGAATCGCCCATATAGTTTCGGTTTCTATATTCTCGTGTTTAGAGATAGGGTTGAATGATAGTTCATGCAAGGTTTTCTTGGAACCCAACATATAGTTTTGTTTTCTGGTTTTGTCCTTGGCTATCTCCCTCCTTAGTCTCTACTAATTCTATTTTTCTGGTAACTAAAGAAAAAAACTATTGAGCGTTCGCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGGTAAGATATTCTTCTATCTTTTATATCCATTTTTTGTTGTAGATTGCCCTGTGACTTTAGTACCTGTGTAATTGATGAGTCGCACGTTTTTTTCCCCTAGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGTGAGTACAACCTTCCTTCATTTGTTACCAACCTTGACTTGTCTGCTCATCCTTCTGCTATCTAACACTCTTTAACTTCATATCCGAGGGCTCCCGGCTCTCTACTGAAAATAGAGCGAGACTATAAATGGGCTCTTTTAATACTAATACTGTAACGGCCCAAGTCCACCACTAGCTGATATTGTCTGTTTTTGCTTGTTACATATCGTCGTCAACCTCACGGTTTTAAAATGCGTCTACTATTGAGAGGATCTAGTCCTACTCCGACCAATACCCCACTCCATATGGTGACTGGGTTTGATACCATTTATAACCACTCAAGCTTATCGCTAGTAGATATTGTCCGCTTTGGCCCGTTACGTGTCGTCGTCAGCTTCACAGTTTTAAAACGCGTTAACTATGAAGAGGTTTCCATGCCCTTATAAAGAAGTTTTGTTTCCCTCTCCAACTGACGTGGGATATTACAATCCACCCCTTTGGGCCTAGCGTCCTCGCTGGCACATCGCTCGATGTCTGGCTCTGATACCATTTGTAATTGTCCAAGCTCACCGCTAGTAGATATCTGTCCATTTTGACCTGTTATGTGTAGCCGTTAGCTTCACGGTTTTATAACGCGTCAACTAGGGAAAGGTTTTTACACCCTTATAAAGAAGTTTTGTTCCAATCTCCAACCGACGTGGGATCTCACAAATTATGTAATAAATTGAGCTTGTATTTCTACAAATGGCACTTCAAACTTGAGACGAGCATGAATAAATTGATGATACTGTATATTGTACAAAGGTTCTTATCTGACCCCTTCATGCATTTTTATGTCATGATAGATTTTTGTTCACCTCATTTAATATACGTCGAACTTGTAGGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGGTATAAAATCACGATCTATCCGTTGTTTATATTTTAGTAAACACATGTTTTTTCTTTTTTCAGTAGAACAATTGAACTATGTTCATGTTGTCGAAGAACGCACGTTTTTAACTCATCTTAATATACAACAGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCGTGGATTATATTCGTGAATTTCATCATGTGTAGAAGTTTGTTAATTAGGTAATATATATCTTTATATATATATATATATATATCTTTTTGTCAGCTTTCTTCCATTCCAAACCTCTCTTTCTCTCTCTTAATCATTTGAAAGAGTTATGTT

mRNA sequence

CCGGCTGCCAGCTCCGGTCACCGGCCGACAGAGGTTATTCATCGGTCTATTCACAGTCCGATCGTTGCAGGAGTTTGAATTTCCCATCGCTTAATGTGAAATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTCGAACAATTCGGGCAGGCCTATGCTCGATCGAACACTCCTGTGGCATCCAATTTTTGAGACAAGACTGCCGTGGATTATATTCGTGAATTTCATCATGTGTAGAAGTTTGTTAATTAGGTAATATATATCTTTATATATATATATATATATATCTTTTTGTCAGCTTTCTTCCATTCCAAACCTCTCTTTCTCTCTCTTAATCATTTGAAAGAGTTATGTT

Coding sequence (CDS)

ATGGCCATTTCAGATGAAGAAGACGAGTTGTTGGCACAGTTTCTTGAAACAGAGGTTCTCTCGGAGGTCTCTGATAAGGAAGAGGGGAACGCACAGGAGGAACCACAACCTAAGAGAGCTCGAATCGAACAGATTAACCCTAACGAACAAAGAGAGGTACCTTCCGTTACTACTTCGTCCTCTCAATTCAGTGGCGTCGTTCCCGGGAGAATTGAGACCGGAATTTTCAGTAGAATTCCTTCGGAGCTCTTCCGCCATATCCTCAAGTTTCTCTCATCAGAGGATCTGATTTCTTGTTCACTGGTTTGTCGATTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGTTGGGGTCTGGTTCCCAAGACCAAGAAATTGCGCCAATGTCCTTGGAAAAAACTATATATTCAGCGTGACGAAGAGGATATGACTCAACTGGTTCGAGATTGTTCTTCCGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGTCAAGCTCCTCTTCCTTCTCAGGTGCAGGACGACCAAATAATTCTCGATAGGACTGTGGCCGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATCGTCATAGATCATACTTGTTCTGGAGAAACATGTACATATTACCAAGTTGGTGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACTTGCCGAGAAGTCGTTATGGATCCGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGATACGTTACTTTTTCCAGACTCTATGGAACTGGATACTGAACTGCAACAAGCTGGTGTAACCGACGAGGCTGAGGCGGAACCATTCATGGGTTCGGGTCGTTTTGCTCGAGCTTACTTGCTGGGGTATAATTGTGCCGACGAGGCCGAGCTAGAAGCTACTTTGAGGTTCTGCTGA

Protein sequence

MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSSSQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC

Homology

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_022936479.1 (F-box protein SKIP31-like [Cucurbita moschata])

HSP 1 Score: 639.8 bits (1649), Expect = 5.0e-180
Identity = 319/324 (98.46%), Postives = 321/324 (99.07%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRI+TGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIDTGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSME DTELQQAGVTDEAE EPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEREPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_023534955.1 (F-box protein SKIP31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 639.0 bits (1647), Expect = 8.5e-180
Identity = 319/324 (98.46%), Postives = 320/324 (98.77%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAISDEEDELLAQFLETEVL EVSDKEEGN QEEPQPKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLLEVSDKEEGNVQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQFSGVVPGRIETGIFS+IPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIETGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSME DTELQQAGVTDEAEAEPFMGSGR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_023525836.1 (F-box protein SKIP31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 600.1 bits (1546), Expect = 4.4e-168
Identity = 294/324 (90.74%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M+I DEEDE LAQF+E+EVLSEVSDKEEGN +EEP+PKRARIEQINPNEQREV SVTTSS
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIETGIFS++P ELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVS+WKSS+GL DKIVIDHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDP+DEQLVCRISGHCFD LL PDSME D+E Q AGVTDEAEAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_011653768.1 (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus])

HSP 1 Score: 595.5 bits (1534), Expect = 1.1e-166
Identity = 294/324 (90.74%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DE+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+ME DTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg20080 vs. NCBI nr
Match: XP_022981027.1 (F-box protein SKIP31-like [Cucurbita maxima])

HSP 1 Score: 593.2 bits (1528), Expect = 5.4e-166
Identity = 293/326 (89.88%), Postives = 308/326 (94.48%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTT-- 60
           M+I DEEDE LAQF+E+EVLSEVSDKEEGN +EEP+PKRARIEQINPNEQREV SVTT  
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSF 60

Query: 61  SSSQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRR 120
           S SQ  GVVPGRIETGIFS++P ELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPLELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGL+P TKKLRQCPWKKLYIQRD EDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPATKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 PSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLV 240
           PSQVQDDQIILDRTVADQVS+WKSS+GL DKIVIDHTCSGETCTYYQ+GDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGS 300
           HVCDDTCREV+MDP+DEQLVCRISGHCFD LL PDSME D+E Q AGVTDEAEAEPFMGS
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSMEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 325
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of Carg20080 vs. TAIR10
Match: AT5G45360.1 (F-box family protein)

HSP 1 Score: 361.7 bits (927), Expect = 4.8e-100
Identity = 186/324 (57.41%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M++SDEEDE  A+FLE+EV S V DKEE    +EP+ KR RIE+    +  E       +
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK-GETKALEKDEDQKEN 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
                    RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRLY
Sbjct: 61  GNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           C+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPS
Sbjct: 121 CIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++TG VHV
Sbjct: 181 QMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE F    R
Sbjct: 241 CDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of Carg20080 vs. Swiss-Prot
Match: sp|Q9FHK0|SKI31_ARATH (F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 8.6e-99
Identity = 186/324 (57.41%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M++SDEEDE  A+FLE+EV S V DKEE    +EP+ KR RIE+    +  E       +
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEE---TKEPEAKRQRIEK-GETKALEKDEDQKEN 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
                    RIE+G+F+ +P+ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRLY
Sbjct: 61  GNKDKTDAKRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           C+RWGL   ++KLR+  WKKLYI RDE+DM +LVR C S+FKEYY+ MQAAKRSQAPLPS
Sbjct: 121 CIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           Q+ DD+IILD TV +QVS WK S+GLTDK V  H C G  C+Y+Q+ D F+C++TG VHV
Sbjct: 181 QMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDD C+EV++ P  + +VC ISG C DTLL     + D   ++     E EAE F    R
Sbjct: 241 CDDNCKEVILSPEGDLMVCTISGVCSDTLLVQTEPDADGCYEEEA---ELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of Carg20080 vs. TrEMBL
Match: tr|A0A1S3B9V0|A0A1S3B9V0_CUCME (F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 1.3e-165
Identity = 292/324 (90.12%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DE+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+ME DTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of Carg20080 vs. TrEMBL
Match: tr|A0A1S3B9Y3|A0A1S3B9Y3_CUCME (F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 583.2 bits (1502), Expect = 3.7e-163
Identity = 290/324 (89.51%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           MAI DE+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQFSGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ  GVVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180
           CLRWG++P +KKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240
             QDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVHV
Sbjct: 181 --QDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMGSGR 300
           CDDTCREV+MDPNDEQLVC ISGHCFD+LL PD+ME DTE QQAG TD  EAEPFMGSGR
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTD--EAEPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 325
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 320

[Close]

BLAST of Carg20080 vs. TrEMBL
Match: tr|A0A0A0L1U0|A0A0A0L1U0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358650 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 5.0e-160
Identity = 290/350 (82.86%), Postives = 305/350 (87.14%), Query Frame = 0


Query: 6   EEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSSSQFSG 65
           E+DE LAQFLE+EVLSEVSDKEEGN QEEP+PKRARIEQI+PNEQREV SVT+SSSQ  G
Sbjct: 66  EDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSSSQSKG 125

Query: 66  VVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWG 125
           VVPGRIE+GIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLYCLRWG
Sbjct: 126 VVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLYCLRWG 185

Query: 126 LVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 185
           ++P+TKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD
Sbjct: 186 MLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPSQVQDD 245

Query: 186 QIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVH------ 245
           QIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETCTYYQ+GDAFVCEKTGLVH      
Sbjct: 246 QIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHGMVFLF 305

Query: 246 -------------------------VCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDS 305
                                    VCDDTCREV+MDPNDEQLVC ISGHCFDTLL PD+
Sbjct: 306 DILLSFISIKFCYILVSNFRHVFFLVCDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDA 365

Query: 306 MELDTELQQAGVTDEAEAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 325
           ME DTE QQAG TD  EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC
Sbjct: 366 MEPDTEQQQAGGTD--EAEPFMGSGRFARAYLLGYNCADEAELEATLRFC 413

[Close]

BLAST of Carg20080 vs. TrEMBL
Match: tr|I1J879|I1J879_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100778591 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.8e-131
Identity = 237/327 (72.48%), Postives = 271/327 (82.87%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M +SD+EDE LAQFLE+EVLSEVSDKEE N  EEP+ KRAR+E+    +Q++     ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-EEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SQF---SGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 +GVVP RIETG FS+IP ELF HILKFLSSEDL+SCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRD EDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVS+WKSSRGL+D +V DH CSGETC+YY +GD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMG 300
           VHV DDTCREVVMDP +E LVC ISGHCFD LL P  ME DTE QQ GVTD  EAEPFMG
Sbjct: 241 VHVXDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

[Close]

BLAST of Carg20080 vs. TrEMBL
Match: tr|A0A0B2R3T9|A0A0B2R3T9_GLYSO (F-box protein SKIP31 OS=Glycine soja OX=3848 GN=glysoja_041786 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 2.8e-131
Identity = 237/327 (72.48%), Postives = 271/327 (82.87%), Query Frame = 0


Query: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVPSVTTSS 60
           M +SD+EDE LAQFLE+EVLSEVSDKEE N  EEP+ KRAR+E+    +Q++     ++ 
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-EEPKAKRARLEEDEITKQKQSSDSLSAP 60

Query: 61  SQF---SGVVPGRIETGIFSRIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWR 120
                 +GVVP RIETG FS+IP ELF HILKFLSSEDL+SCSLVCRFLN  ASDE+LWR
Sbjct: 61  KNIVVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRFLNYAASDEALWR 120

Query: 121 RLYCLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAP 180
           RLYC+RWG++P T+KLR+CPWK LYIQRD EDM +LVR C +EFKEYYIQMQAAKRSQAP
Sbjct: 121 RLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQAP 180

Query: 181 LPSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGL 240
            PSQ++DD+IILD+T+ADQVS+WKSSRGL+D +V DH CSGETC+YY +GD F+CEKTG 
Sbjct: 181 HPSQLKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQ 240

Query: 241 VHVCDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMELDTELQQAGVTDEAEAEPFMG 300
           VHV DDTCREVVMDP +E LVC ISGHCFD LL P  ME DTE QQ GVTD  EAEPFMG
Sbjct: 241 VHVXDDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPDTEQQQGGVTD--EAEPFMG 300

Query: 301 SGRFARAYLLGYNCADEAELEATLRFC 325
           SGRFARAY LGYNCADE ELEATLRFC
Sbjct: 301 SGRFARAYSLGYNCADEKELEATLRFC 324

The following BLAST results are available for this feature:

BLAST of Carg20080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936479.1	5.0e-180	98.46	F-box protein SKIP31-like [Cucurbita moschata]	[more]
XP_023534955.1	8.5e-180	98.46	F-box protein SKIP31-like [Cucurbita pepo subsp. pepo]	[more]
XP_023525836.1	4.4e-168	90.74	F-box protein SKIP31-like [Cucurbita pepo subsp. pepo]	[more]
XP_011653768.1	1.1e-166	90.74	PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis sativus]	[more]
XP_022981027.1	5.4e-166	89.88	F-box protein SKIP31-like [Cucurbita maxima]	[more]

BLAST of Carg20080 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G45360.1	4.8e-100	57.41	F-box family protein	[more]

BLAST of Carg20080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FHK0\|SKI31_ARATH	8.6e-99	57.41	F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1	[more]

BLAST of Carg20080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B9V0\|A0A1S3B9V0_CUCME	1.3e-165	90.12	F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
tr\|A0A1S3B9Y3\|A0A1S3B9Y3_CUCME	3.7e-163	89.51	F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
tr\|A0A0A0L1U0\|A0A0A0L1U0_CUCSA	5.0e-160	82.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G358650 PE=4 SV=1	[more]
tr\|I1J879\|I1J879_SOYBN	2.8e-131	72.48	Uncharacterized protein OS=Glycine max OX=3847 GN=100778591 PE=4 SV=1	[more]
tr\|A0A0B2R3T9\|A0A0B2R3T9_GLYSO	2.8e-131	72.48	F-box protein SKIP31 OS=Glycine soja OX=3848 GN=glysoja_041786 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20080-RA	Carg20080-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 79..119 e-value: 5.5E-7 score: 39.2
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 77..121 e-value: 3.1E-12 score: 46.1
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 73..119 score: 14.823
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 61..151 e-value: 4.4E-17 score: 63.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..46
None	No IPR available	PANTHER	PTHR22990	F-BOX ONLY PROTEIN	coord: 239..324
None	No IPR available	PANTHER	PTHR22990	F-BOX ONLY PROTEIN	coord: 63..236
None	No IPR available	PANTHER	PTHR22990:SF27	F-BOX PROTEIN SKIP31	coord: 239..324
None	No IPR available	PANTHER	PTHR22990:SF27	F-BOX PROTEIN SKIP31	coord: 63..236
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 61..145

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20080	Cla023199	Watermelon (97103) v1	carwmB1046
Carg20080	Csa4G358650	Cucumber (Chinese Long) v2	carcuB1058
Carg20080	MELO3C010523	Melon (DHL92) v3.5.1	carmeB1012
Carg20080	ClCG11G016070	Watermelon (Charleston Gray)	carwcgB1018
Carg20080	CSPI04G17430	Wild cucumber (PI 183967)	carcpiB1080
Carg20080	CmaCh09G007650	Cucurbita maxima (Rimu)	carcmaB1445
Carg20080	CmaCh01G013610	Cucurbita maxima (Rimu)	carcmaB1446
Carg20080	CmoCh09G007560	Cucurbita moschata (Rifu)	carcmoB1399
Carg20080	CmoCh01G014130	Cucurbita moschata (Rifu)	carcmoB1400
Carg20080	Lsi04G018440	Bottle gourd (USVL1VR-Ls)	carlsiB954
Carg20080	Cp4.1LG06g06040	Cucurbita pepo (Zucchini)	carcpeB1455
Carg20080	Cp4.1LG02g03030	Cucurbita pepo (Zucchini)	carcpeB1454
Carg20080	CsGy4G016630	Cucumber (Gy14) v2	carcgybB1027
Carg20080	MELO3C010523.2	Melon (DHL92) v3.6.1	carmedB1024
Carg20080	CsaV3_4G027900	Cucumber (Chinese Long) v3	carcucB1091
Carg20080	Cla97C11G222040	Watermelon (97103) v2	carwmbB1104
Carg20080	Bhi09G002284	Wax gourd	carwgoB1225

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20080	Carg00308	Silver-seed gourd	carcarB574

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20080	Cucumber (Gy14) v2	carcgybB1030
Carg20080	Cucumber (Chinese Long) v2	carcuB1061
Carg20080	Cucumber (Chinese Long) v3	carcucB1094