Cp4.1LG05g12320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g12320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCSL zinc finger domain-containing protein
LocationCp4.1LG05 : 8626948 .. 8629211 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGCAAAAGAAAATCACGCTTCCGTTCCACGTTTTTTTTCCCCAAATTTCCCCTTCTTAGGGCTTACCGCCCTCTGATCTTACACAAAATCGGAAATCGGAAATCGGAAATCACTCTGCATTATCTTGACTCCACGGTACAGAGATCTTATTTCTGTTGATTCTCTGCGTTTTCTTATCGTTGTAGATGGTGAAGAGAATAAGTGAAGGCAGAATTGCTGCGATGTGGACGGTAGTGACAGAGGCTTTGGTTGCGATGATGCTGATTTTGGTTGTGGAAGGGATGGATACGAACGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAAGAATCGTTCTTTCAGGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGTACGTCTGTGATTTATATGTTAGTCTCGTAACAAAATGTTCATCCATTACTGTTTTCGTCAATGAAAATTTGCTCCATTGATTTCGTTTTGGATGAAAATATGATGCAGTGCTATAACAAGTCAATCCATGATGGATCAATGGGAGTTCTACCATTTAGAAACAAAATTCCATTGGTCAAATCATGGGTGGGTCACTAACTTTTTGAATCTTTTCCTTGAACAAGAAATAATGGAATAATTGGGTAGATGGGCTTTGTAACGACCCAGATTCACCGCTTGCAGATATTGTCTTCTTTGGACTTTCCTTTTCGGCCTTCCCCTCGGGGCTTTAAAACTCTGCTAGGGGAATGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCTCCAACCAATGTGAGACATCACAATGCAGTATGAAATTTCGGTTAGGAATAACGACTCTCCACATATTGTCCACTAAGTATAAACTCTCGTGGTTTTGCTTTAGACTATCCAAAAGGCCTCGTACTCAATGGAAATAGTACCTAATGGAAATAGTATCCCTTCCTTATAAACCCATGATCGTCCACTAAATTAACCAATGTGGGACTCTCTCCCAACAATCTCAATAATTCCATGATGATTTTTGCTCGGTTGTAGGCTACGTATGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACCAGTTTCACTTTGGTAAGCCCACAAAGGACAGAAAAACAAAAGTGAAAAATCACCATCTTAATGGTAACAAAAGGGTTCTATTCTCCTTGTGTCTGTCTATATTGCTTTCCAGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTCCCAGCTCCAAATGTAACTACAATGGCGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGGTAAGATCACCAATCCGTTCCAGTGAGAATCTTTTATATCTTCAGCTCTGTAGGCAAGGATCCAAAATGAGTTATGATCTGCACATGTCAAGATGGCTTATTCATAGGAAAGGTTATGTTGTCATTGGTCCATGCTCTGTAACTGTACAATCTTGAAGATTCAATCTATATATATAGAGAGAGTTAAAATGTATTCTGCAGAAATGAGATTACTGACCATTGAAGATGGAAAGGTTTCTACACAAAAGATACAGATCTGAGGGGATATCTTTATCCCTTTTCTATCTAATCACCACCACAAAATCGAATGATCTTGATCAAAGATCGAGTTCTCGTCAAGATCATGTCCTAAAAGAGATTCAGATCCACTGGGATGTCAATCAAAAAACAATTCTCTGATCCCAACTGTTAGAATTCAACTAAACCTTATCTTTCTTCTCCTCCATTCCACCATTGCCATTTACAGCTACTTTTCCTTCTTTCTCATGCCATTCTAGTAAAAATGCTCACTTATCTGACAGAGGAAAGGGAATCGTCACGCTCCGGCGGTTGGTTCGCCAAAGCTTGTGAACTATCTACAGAACCTACACCTTTCTGGTTCAGCGGAGCACCGCGAGTTT

mRNA sequence

CAAGCAAAAGAAAATCACGCTTCCGTTCCACGTTTTTTTTCCCCAAATTTCCCCTTCTTAGGGCTTACCGCCCTCTGATCTTACACAAAATCGGAAATCGGAAATCGGAAATCACTCTGCATTATCTTGACTCCACGGTACAGAGATCTTATTTCTGTTGATTCTCTGCGTTTTCTTATCGTTGTAGATGGTGAAGAGAATAAGTGAAGGCAGAATTGCTGCGATGTGGACGGTAGTGACAGAGGCTTTGGTTGCGATGATGCTGATTTTGGTTGTGGAAGGGATGGATACGAACGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAAGAATCGTTCTTTCAGGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGCTACGTATGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACCAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTCCCAGCTCCAAATGTAACTACAATGGCGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGGTAAGATCACCAATCCGTTCCAGTGAGAATCTTTTATATCTTCAGCTCTGTAGGCAAGGATCCAAAATGAGTTATGATCTGCACATGTCAAGATGGCTTATTCATAGGAAAGGTTATGTTGTCATTGGTCCATGCTCTGTAACTGTACAATCTTGAAGATTCAATCTATATATATAGAGAGAGTTAAAATGTATTCTGCAGAAATGAGATTACTGACCATTGAAGATGGAAAGGTTTCTACACAAAAGATACAGATCTGAGGGGATATCTTTATCCCTTTTCTATCTAATCACCACCACAAAATCGAATGATCTTGATCAAAGATCGAGTTCTCGTCAAGATCATGTCCTAAAAGAGATTCAGATCCACTGGGATGTCAATCAAAAAACAATTCTCTGATCCCAACTGTTAGAATTCAACTAAACCTTATCTTTCTTCTCCTCCATTCCACCATTGCCATTTACAGCTACTTTTCCTTCTTTCTCATGCCATTCTAGTAAAAATGCTCACTTATCTGACAGAGGAAAGGGAATCGTCACGCTCCGGCGGTTGGTTCGCCAAAGCTTGTGAACTATCTACAGAACCTACACCTTTCTGGTTCAGCGGAGCACCGCGAGTTT

Coding sequence (CDS)

ATGGTGAAGAGAATAAGTGAAGGCAGAATTGCTGCGATGTGGACGGTAGTGACAGAGGCTTTGGTTGCGATGATGCTGATTTTGGTTGTGGAAGGGATGGATACGAACGATGTATACAGTCCTTGTTTGGATGCGAAGATTCAGAGATCAGACGGATTTACTTTTGGCGTAGCGTTTTCGTCGAAAGAATCGTTCTTTCAGGATCATATTCAGTTTTCGCCTTGCGATAAGCGTTTGGCTTTGACATTCAAAGTCGCTCAACTTGCTGTTTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCAATAGCACAGCCTTCAATCCGGCTACGTATGGTGGCTATATGGTGGCATTTGCTGGGCTGAAGTATGCAGCAAGGTCTCTCCCAGTGATGGTTACTGATAACTCTCACACCATTACCAGTTTCACTTTGGTTTTTGAATTTCAAAAGGGCACTCTTCAAAATCTGTTCTGGAAGAAATTTGGGTGTGATAAATGCTCTGGGGATTTTTCAACTTGCCTGGATAAACAAGACTGTGCAGTTCCCAGCTCCAAATGTAACTACAATGGCGGTTCAATTGACTGCAATTTAGGCATACAACTAGCATTTTCAGGGACAGACAAGAACCTCCAAGTCCTCAACTCCTGGTTTGAAGTTAACCATCTCAGACGCTTCTCCCTCTATAAACTTTTCTCCGACGTTCGCGGTAAGATCACCAATCCGTTCCAGTGA

Protein sequence

MVKRISEGRIAAMWTVVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ
Homology
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BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match: A0A0A0LIV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.0e-95
Identity = 173/229 (75.55%), Postives = 195/229 (85.15%), Query Frame = 1 

Query: 16  VVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPC 75
           ++  ALV  +L+LVVEG+DTNDVYSPCLD+KIQRSDGFTFGVAFSSKESFFQD IQFSPC
Sbjct: 6   IMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 76  DKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVT 135
           D RL+L  K+AQL VFRPKVDQL+FLTINS+ FNPA  GGYMVAFAG KYAARSLPV+  
Sbjct: 66  DTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVL-- 125

Query: 136 DNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSI 195
                        EFQ+G LQNLFWKKFGCDKCSGDFS C+D QDCA+P+SKC YNGGS+
Sbjct: 126 -------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSV 185

Query: 196 DCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPF 245
           DCNLGIQLAFSGTDKNL+VLNSW+EV++LRRFSLY+LFSDVR  +TNPF
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPF 219

[Close]
BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match: B9RZH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.4e-83
Identity = 153/231 (66.23%), Postives = 185/231 (80.09%), Query Frame = 1 

Query: 10  IAAMWTVVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDH 69
           +AA  T+V   +V   +I+     D+NDV+SPC DAKI++SDGFTFG+AFSSKESFF DH
Sbjct: 1   MAATPTMVAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDH 60

Query: 70  IQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARS 129
           +Q SPCD RLAL  K+AQLAVFRPKVD+++ LTINS+ FNP   GGYMVAFAG KYAARS
Sbjct: 61  VQLSPCDSRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARS 120

Query: 130 LPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCN 189
            PVMV DN   +TSFTLV EFQ+G LQNL+WK FGCDKCS DF  CL+ +DCAV +SKC 
Sbjct: 121 FPVMVADNGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCR 180

Query: 190 YNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKI 241
            NGG IDCNLG+QL FSGTDKNL+ LNSW+EV++LR++SLY L+S++R  I
Sbjct: 181 SNGGHIDCNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

[Close]
BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match: A0A068TMF3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 5.8e-83
Identity = 146/231 (63.20%), Postives = 187/231 (80.95%), Query Frame = 1 

Query: 15  TVVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSP 74
           T+V   +  + ++L V   DTN  + PC DAK+QRSDGF+FG+AFSSK+SFF +  Q SP
Sbjct: 4   TIVFIMVEMLAMMLAVHAGDTNPEFDPCSDAKVQRSDGFSFGLAFSSKDSFFFNQTQLSP 63

Query: 75  CDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMV 134
           CD+RL+L+ K AQLA+FRPKVD+++ LTINS+ F+P   GGYMVAFAG +YAARS+PV V
Sbjct: 64  CDQRLSLSAKSAQLAIFRPKVDEMSLLTINSSTFDPRNSGGYMVAFAGRRYAARSIPVFV 123

Query: 135 TDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGS 194
            DN+ T+TSFTLV EFQKGTLQNLFWKK+GCD CSGD   C++  DCA+ +SKC  NGGS
Sbjct: 124 ADNAQTVTSFTLVLEFQKGTLQNLFWKKYGCDACSGDSFVCMNNTDCAIRNSKCKGNGGS 183

Query: 195 IDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ 246
           +DCN+GIQLAFSGTDKN  VLNSW+EV++LR++SLY L+SD+R  +T+PF+
Sbjct: 184 LDCNIGIQLAFSGTDKNDDVLNSWYEVSNLRQYSLYALYSDLRDSLTSPFK 234

[Close]
BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match: M1A6T5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006221 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 6.5e-82
Identity = 148/233 (63.52%), Postives = 185/233 (79.40%), Query Frame = 1 

Query: 16  VVTEALVAMMLILVVEGM---DTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQF 75
           +V   L++M ++++++ +   DTN V+ PC D ++QR DGFTFG+ FSSKESFF +  Q 
Sbjct: 2   LVVLILMSMSMMIMMDNVYAGDTNSVFDPCSDTRVQRWDGFTFGLVFSSKESFFFNESQL 61

Query: 76  SPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPV 135
           SPCD+RL+LT   A+LAVFRPKVD+++ LTIN + FNP+  GGYMVAFAG KYAARSLP 
Sbjct: 62  SPCDRRLSLTGNSAELAVFRPKVDEISLLTINISNFNPSKSGGYMVAFAGRKYAARSLPA 121

Query: 136 MVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNG 195
            V D++HT+TSFTLV EFQKGTLQNLFWKKFGCD C GD   CL+K DCAVP++KCN NG
Sbjct: 122 FVADSTHTVTSFTLVLEFQKGTLQNLFWKKFGCDSCKGDSFVCLNKTDCAVPNNKCNGNG 181

Query: 196 GSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ 246
           GSIDCN+ IQLAFSGTDKN  VLNSW+EV +LR++SLY LF  V   +T+PF+
Sbjct: 182 GSIDCNVSIQLAFSGTDKNENVLNSWYEVKNLRQYSLYGLFQGVSDSLTSPFK 234

[Close]
BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match: K4D0K1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 147/235 (62.55%), Postives = 184/235 (78.30%), Query Frame = 1 

Query: 13  MWTVVTEALVAMMLILV--VEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHI 72
           M T++   ++   ++++  V   DTN V+ PC D ++QR DGFTFG+ FSSKESFF +  
Sbjct: 1   MGTILVVLILVSTMVMMDNVYAGDTNSVFDPCSDTRVQRWDGFTFGLVFSSKESFFFNET 60

Query: 73  QFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSL 132
           Q SPCD+RL+LT   A+LAVFRPKVD+++ L IN++ FNP+  GGYMVAFAG KYAARSL
Sbjct: 61  QLSPCDRRLSLTGNSAELAVFRPKVDEISLLKINNSNFNPSKSGGYMVAFAGRKYAARSL 120

Query: 133 PVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNY 192
           P  V D++HT+TSFTLV EFQKGTLQNLFWKKFGCD C GD   CL+K DCAVP++KCN 
Sbjct: 121 PAFVADSTHTVTSFTLVLEFQKGTLQNLFWKKFGCDSCKGDSFVCLNKTDCAVPNNKCNG 180

Query: 193 NGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ 246
           NGGSIDC++ IQLAFSGTDKN  VLNSW+EV +LR++SLY LF DV   +T+PF+
Sbjct: 181 NGGSIDCDVSIQLAFSGTDKNEDVLNSWYEVKNLRQYSLYGLFQDVSDSLTSPFK 235

[Close]
BLAST of Cp4.1LG05g12320 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-72
Identity = 131/234 (55.98%), Postives = 171/234 (73.08%), Query Frame = 1 

Query: 18  TEALVAMMLILVVE----GMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFS 77
           T  ++ MM++++V+      D N VYSPC D +I + DGFT G+A SSKE+FF D +Q S
Sbjct: 124 TTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQVQLS 183

Query: 78  PCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVM 137
           PCD RL L  K+AQLA+FRPKVD+++ L+I+++ FNP+  GG+MV FAG KYAARS PV 
Sbjct: 184 PCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARSYPVK 243

Query: 138 VTDNSHTITSFT---------LVFEFQKGTLQNLFWKKFGCDKCSG---DFSTCLDKQDC 197
           V D S+TIT+FT         LV EFQKG LQNLFWK FGCD C G     S CL+  DC
Sbjct: 244 VADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDC 303

Query: 198 AVPSSKCNYNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSD 236
           AVP+SKC  NGG  +CN+GIQ+AFSGTD+NL+ LN+W+EVN+LR++SL  L+++
Sbjct: 304 AVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYAN 357

[Close]
BLAST of Cp4.1LG05g12320 vs. TAIR10
Match: AT3G44150.1 (AT3G44150.1 unknown protein)

HSP 1 Score: 268.9 bits (686), Expect = 3.2e-72
Identity = 123/213 (57.75%), Postives = 168/213 (78.87%), Query Frame = 1 

Query: 34  DTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDH-IQFSPCDKRLALTFKVAQLAVFR 93
           +TN +YSPC D +IQRSDGFTFG+AFSS+ SFF +  +  SPCD+RL+L    +Q +VFR
Sbjct: 30  NTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFSVFR 89

Query: 94  PKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSHTITSFTLVFEFQK 153
           PK+D+++ L+IN++AF P  YGGYMVAFAG KYAARS+P  + +++  +TSFTLV EFQK
Sbjct: 90  PKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVMEFQK 149

Query: 154 GTLQNLFWKKFGCDKCSGDFS-TCLDKQDCAVPSSKCNYNGGSIDCNLGIQLAFSGTDKN 213
           G LQNL+WK+ GC  C G+ +  CL+KQDCA+ +  C   GG++DC+LGIQLAFSGTDK+
Sbjct: 150 GRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFSGTDKH 209

Query: 214 LQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPF 245
           L VLNSW+EV +L+++SLY L+S+++  +TN F
Sbjct: 210 LAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQF 242

[Close]
BLAST of Cp4.1LG05g12320 vs. TAIR10
Match: AT3G11800.1 (AT3G11800.1 unknown protein)

HSP 1 Score: 263.8 bits (673), Expect = 1.0e-70
Identity = 126/231 (54.55%), Postives = 169/231 (73.16%), Query Frame = 1 

Query: 23  AMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDH----IQFSPCDKR 82
           A++   + E  D N VYSPC D+ +   DGFTFG+AF++K+SFF  +    +Q+SPCD R
Sbjct: 13  AVLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHR 72

Query: 83  LALTFKVAQLAVFRPKVDQLTFLTIN---STAFNPATYGGYMVAFAGLKYAARSLPVMVT 142
                  +++AVFRPKVD++T LTIN   S++F P    GYMVAFAG KYAARSLP+MV 
Sbjct: 73  HLSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVA 132

Query: 143 DNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFS-TCLDKQDCAVPSSKCNYNGGS 202
           D++H +TSFTLV EFQKG L+N+FWKK GC KCSGD    CL+K++CA+    C   GG 
Sbjct: 133 DSNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQ 192

Query: 203 IDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ 246
           +DC+LGIQLAFSGTDK+   LNSW+EV +L+++SLY L+S+++  +TNPF+
Sbjct: 193 VDCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFK 243

[Close]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match: gi|778669190|ref|XP_011649210.1| (PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 5.4e-106
Identity = 186/229 (81.22%), Postives = 209/229 (91.27%), Query Frame = 1 

Query: 16  VVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPC 75
           ++  ALV  +L+LVVEG+DTNDVYSPCLD+KIQRSDGFTFGVAFSSKESFFQD IQFSPC
Sbjct: 6   IMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 76  DKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVT 135
           D RL+L  K+AQL VFRPKVDQL+FLTINS+ FNPA  GGYMVAFAG KYAARSLPVM+T
Sbjct: 66  DTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVMIT 125

Query: 136 DNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSI 195
           DNS+TITSFTLV EFQ+G LQNLFWKKFGCDKCSGDFS C+D QDCA+P+SKC YNGGS+
Sbjct: 126 DNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSV 185

Query: 196 DCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPF 245
           DCNLGIQLAFSGTDKNL+VLNSW+EV++LRRFSLY+LFSDVR  +TNPF
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPF 234

[Close]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match: gi|659118650|ref|XP_008459230.1| (PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo])

HSP 1 Score: 389.8 bits (1000), Expect = 3.5e-105
Identity = 185/225 (82.22%), Postives = 207/225 (92.00%), Query Frame = 1 

Query: 20  ALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPCDKRL 79
           ALV  +L+LV EG+DTNDVYSPCLD+KIQRSDGFTFGVAFSSKESFFQD IQFSPCD RL
Sbjct: 10  ALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPCDARL 69

Query: 80  ALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSH 139
           +L  K AQLAVFRPKVDQL+FLTI+++ FNPA  GGYMVAFAG KYAARSLPVMVTDNSH
Sbjct: 70  SLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSLPVMVTDNSH 129

Query: 140 TITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSIDCNL 199
           TITSFTLVFEF++GTLQNLFWKKFGCDKCSGDFS C+D QDCA+ SSKC Y+GGS+DCNL
Sbjct: 130 TITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKYSGGSVDCNL 189

Query: 200 GIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPF 245
           GIQLAFSGTDKNL+VLNSW+E+++LRRFSLY+LFSDVR  +TNPF
Sbjct: 190 GIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPF 234

[Close]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match: gi|700206629|gb|KGN61748.1| (hypothetical protein Csa_2G237180 [Cucumis sativus])

HSP 1 Score: 357.8 bits (917), Expect = 1.5e-95
Identity = 173/229 (75.55%), Postives = 195/229 (85.15%), Query Frame = 1 

Query: 16  VVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPC 75
           ++  ALV  +L+LVVEG+DTNDVYSPCLD+KIQRSDGFTFGVAFSSKESFFQD IQFSPC
Sbjct: 6   IMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQIQFSPC 65

Query: 76  DKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVT 135
           D RL+L  K+AQL VFRPKVDQL+FLTINS+ FNPA  GGYMVAFAG KYAARSLPV+  
Sbjct: 66  DTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSLPVL-- 125

Query: 136 DNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSI 195
                        EFQ+G LQNLFWKKFGCDKCSGDFS C+D QDCA+P+SKC YNGGS+
Sbjct: 126 -------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKYNGGSV 185

Query: 196 DCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPF 245
           DCNLGIQLAFSGTDKNL+VLNSW+EV++LRRFSLY+LFSDVR  +TNPF
Sbjct: 186 DCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPF 219

[Close]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match: gi|697164362|ref|XP_009590990.1| (PREDICTED: uncharacterized protein LOC104088076 [Nicotiana tomentosiformis])

HSP 1 Score: 316.6 bits (810), Expect = 3.8e-83
Identity = 151/225 (67.11%), Postives = 180/225 (80.00%), Query Frame = 1 

Query: 21  LVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDHIQFSPCDKRLA 80
           ++ MM++  V G DTN V+ PC D KIQR DGFTFG+AFSSKESFF +  Q SPCD+RL+
Sbjct: 10  VLTMMVMSNVHGGDTNPVFDPCSDTKIQRWDGFTFGLAFSSKESFFSNGTQLSPCDQRLS 69

Query: 81  LTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARSLPVMVTDNSHT 140
           L+   AQLAVFRPKVD+++ LTI S+ FNP+  G YMVAFAG KYAARSLP  V DN+HT
Sbjct: 70  LSANSAQLAVFRPKVDEISLLTITSSDFNPSKAGSYMVAFAGRKYAARSLPAFVADNTHT 129

Query: 141 ITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCNYNGGSIDCNLG 200
           ITSFTLV EFQKG LQNLFWKKFGC  C+G    CL+K DCAVP++KCN NGGS+DCN+G
Sbjct: 130 ITSFTLVLEFQKGALQNLFWKKFGCGSCTGGSFVCLNKTDCAVPNNKCNGNGGSVDCNVG 189

Query: 201 IQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKITNPFQ 246
           IQLAFSGTDKN  VLNSW+EV +LR++SLY LF DV   +T+PF+
Sbjct: 190 IQLAFSGTDKNDDVLNSWYEVKNLRQYSLYGLFQDVSDSLTSPFK 234

[Close]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match: gi|223541809|gb|EEF43357.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 316.2 bits (809), Expect = 4.9e-83
Identity = 153/231 (66.23%), Postives = 185/231 (80.09%), Query Frame = 1 

Query: 10  IAAMWTVVTEALVAMMLILVVEGMDTNDVYSPCLDAKIQRSDGFTFGVAFSSKESFFQDH 69
           +AA  T+V   +V   +I+     D+NDV+SPC DAKI++SDGFTFG+AFSSKESFF DH
Sbjct: 1   MAATPTMVAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDH 60

Query: 70  IQFSPCDKRLALTFKVAQLAVFRPKVDQLTFLTINSTAFNPATYGGYMVAFAGLKYAARS 129
           +Q SPCD RLAL  K+AQLAVFRPKVD+++ LTINS+ FNP   GGYMVAFAG KYAARS
Sbjct: 61  VQLSPCDSRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARS 120

Query: 130 LPVMVTDNSHTITSFTLVFEFQKGTLQNLFWKKFGCDKCSGDFSTCLDKQDCAVPSSKCN 189
            PVMV DN   +TSFTLV EFQ+G LQNL+WK FGCDKCS DF  CL+ +DCAV +SKC 
Sbjct: 121 FPVMVADNGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCR 180

Query: 190 YNGGSIDCNLGIQLAFSGTDKNLQVLNSWFEVNHLRRFSLYKLFSDVRGKI 241
            NGG IDCNLG+QL FSGTDKNL+ LNSW+EV++LR++SLY L+S++R  I
Sbjct: 181 SNGGHIDCNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g12320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g12320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIV3_CUCSA1.0e-9575.55Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1[more]
B9RZH7_RICCO3.4e-8366.23Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1[more]
A0A068TMF3_COFCA5.8e-8363.20Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1[more]
M1A6T5_SOLTU6.5e-8263.52Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006221 PE=4 SV=1[more]
K4D0K1_SOLLC1.9e-8162.55Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG05g12320 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15910.12.4e-7255.98 CSL zinc finger domain-containing protein[more]
AT3G44150.13.2e-7257.75 unknown protein[more]
AT3G11800.11.0e-7054.55 unknown protein[more]
BLAST of Cp4.1LG05g12320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778669190|ref|XP_011649210.1|5.4e-10681.22PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus][more]
gi|659118650|ref|XP_008459230.1|3.5e-10582.22PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo][more]
gi|700206629|gb|KGN61748.1|1.5e-9575.55hypothetical protein Csa_2G237180 [Cucumis sativus][more]
gi|697164362|ref|XP_009590990.1|3.8e-8367.11PREDICTED: uncharacterized protein LOC104088076 [Nicotiana tomentosiformis][more]
gi|223541809|gb|EEF43357.1|4.9e-8366.23conserved hypothetical protein [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g12320.1Cp4.1LG05g12320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 1..245
score: 4.3E
NoneNo IPR availablePANTHERPTHR21454:SF9SUBFAMILY NOT NAMEDcoord: 1..245
score: 4.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g12320Cucsa.110010Cucumber (Gy14) v1cgycpeB0247
Cp4.1LG05g12320CmaCh20G008850Cucurbita maxima (Rimu)cmacpeB585
Cp4.1LG05g12320CmaCh02G004310Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g12320CmoCh02G004330Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g12320CmoCh20G008920Cucurbita moschata (Rifu)cmocpeB534
Cp4.1LG05g12320Cla010277Watermelon (97103) v1cpewmB685
Cp4.1LG05g12320Csa2G237180Cucumber (Chinese Long) v2cpecuB704
Cp4.1LG05g12320MELO3C021927Melon (DHL92) v3.5.1cpemeB671
Cp4.1LG05g12320ClCG09G017660Watermelon (Charleston Gray)cpewcgB626
Cp4.1LG05g12320CSPI02G11770Wild cucumber (PI 183967)cpecpiB706
Cp4.1LG05g12320Lsi10G003210Bottle gourd (USVL1VR-Ls)cpelsiB589
Cp4.1LG05g12320MELO3C021927.2Melon (DHL92) v3.6.1cpemedB801
Cp4.1LG05g12320CsaV3_2G014260Cucumber (Chinese Long) v3cpecucB0879
Cp4.1LG05g12320CsGy2G011800Cucumber (Gy14) v2cgybcpeB240
Cp4.1LG05g12320Carg23621Silver-seed gourdcarcpeB1114
Cp4.1LG05g12320Carg22971Silver-seed gourdcarcpeB1243
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g12320Cp4.1LG16g02100Cucurbita pepo (Zucchini)cpecpeB309
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g12320Wax gourdcpewgoB0932
Cp4.1LG05g12320Wax gourdcpewgoB0956
Cp4.1LG05g12320Wax gourdcpewgoB0958
Cp4.1LG05g12320Cucurbita pepo (Zucchini)cpecpeB097
Cp4.1LG05g12320Cucurbita pepo (Zucchini)cpecpeB274
Cp4.1LG05g12320Cucurbita pepo (Zucchini)cpecpeB506
Cp4.1LG05g12320Cucurbita moschata (Rifu)cmocpeB499
Cp4.1LG05g12320Bottle gourd (USVL1VR-Ls)cpelsiB605
Cp4.1LG05g12320Watermelon (Charleston Gray)cpewcgB662
Cp4.1LG05g12320Watermelon (97103) v1cpewmB748
Cp4.1LG05g12320Silver-seed gourdcarcpeB0568
Cp4.1LG05g12320Cucumber (Chinese Long) v3cpecucB0945