CmoCh20G008920 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G008920
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionCSL zinc finger domain-containing protein
LocationCmo_Chr20 : 4524047 .. 4526379 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGATGCTTTTTTTTCCCTCGTTGTACATGGTGAAGATGATGAGTGAAGGCAGAATGGGTGCGATGGGGACGGTGACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAATCGATACGAACGACGTATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGATGGATTCACTTTTGGCATAGCGTTTTCGTCGAAGGAAGCTTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCTTTGATATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAAGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGTACGTCTGTGACTCATCTCTTCACAATGTTTATCTCATACCATTTTCATCGATGAAAATTGATTTCGTTTTAACCAATTCCATTGATTTCGTTTCTTCCCCTGTTTTACCAAGAACATGAACTGTAGACAATTATAGAATAACAAGGTCTAAGAATTTGAATCTCGACCTGATCTATGTTCAATATAGCTTTTCATATTTATTCTCCATGATAATTATTGAAGAATGACAAAATCAGATAAGAGTTATTTTTTTATATAGAGAATCACAATTCAAACAAGGGGTAAGGATTAGCAAACATATAGATGATTCTTTTTCCTGTTTCTAGTACAAGTATGAACGGGGGAGGATTTTACTTCCACTCTTAAAGGTTTATTTGTATAAGTATGAATTATTCACCCGCGGCAAGTTGTCATAACTAAAGGGTTCATATTTTAATTTATTTTGGTTATTAACTCTCATTTACTTCATAATCAAATGATTCATGTATGACATTAATGCTTCTAATGCCTATATAAAAGTTTGTCTAGCATTATTTTGAGACGTGGAGTCATTGCCTTTTTGTATTTGCATAGTGAAATTTGGATTAGATGTGGAGTCATTGTCATTTTTATATAGTAGAATTTGGGTTAGATGTGGAGTCATTGCCATTTTGTATTTGTCTAGAGGCAATTGGGAGGAACTTAGTAACGTAGTAAGAGAGACTTTGTAGCGTGAGAGTGTGATAGATACACTTGTAAACACTTTGGTTATTGTGATTTGGCTACCATCCGTGGATTTAGAGGAATTTTTTCTCTCCGAACCATGTAAATCTTTGTATCTATTTGTTCAATTTCTGCTTATGGATGTGTGAGTACGTTTTTGTGTCTATTTGTGGATATGTGAGTACAATCGATCTTGCTTCCTCCTTTACCGACAACAATTGGGTATCTCTGCCATTTTTGTCCAACAATAAGTCAATCCATGATATAGATAAAATGGATGACAACTCATCCAACTAGAGTTCTGTTCTACCAATTAGAAATATGTGTAGTTAGCAGTTGGAAACATTTGTAAAGGTAGCACAAAGCAGAGAAAAAAACCTCTCCAAATCACACACTTCAAACAATTTTTTTCATTGGTCAAACCGTGGGTGGGTCACTAACTTTTTGAATGTTGAAACAATGAACTAATGGAAGATTTTGGTATGGTGGATGATTTGATTATATGATTGTTAGAAAGGAAGGTTAGGACATCAATTTAAAAGTTCAAATGAATATGATTCGTGGTGGTTTGCAGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCAGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTAAGCCCATAAACCACCATTTACCATTGTGATGATACCCACCACCACCATTGTGATGATAACAGTTAAGTGTTGCTTGTGTCAATGTTGTACCCAGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGCAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCGCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAAAATTCTTCATCTCTGTAGGCAAGGAACCAATATTCTTCATCGTAGCTCAGAGCTATGATCTACATTTTGTTAGATATTGTACAATCTTGAAGATTCAACACACACATATATATACATGGTGCAGCATAATACCATTGAATTTTATGGCTGAACTGTATTGATATTAATCAAATCTGTTCTGATATTAATCATAA

mRNA sequence

TTTTGATGCTTTTTTTTCCCTCGTTGTACATGGTGAAGATGATGAGTGAAGGCAGAATGGGTGCGATGGGGACGGTGACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAATCGATACGAACGACGTATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGATGGATTCACTTTTGGCATAGCGTTTTCGTCGAAGGAAGCTTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCTTTGATATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAAGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCAGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGCAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCGCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAAAATTCTTCATCTCTGTAGGCAAGGAACCAATATTCTTCATCGTAGCTCAGAGCTATGATCTACATTTTGTTAGATATTGTACAATCTTGAAGATTCAACACACACATATATATACATGGTGCAGCATAATACCATTGAATTTTATGGCTGAACTGTATTGATATTAATCAAATCTGTTCTGATATTAATCATAA

Coding sequence (CDS)

ATGCTTTTTTTTCCCTCGTTGTACATGGTGAAGATGATGAGTGAAGGCAGAATGGGTGCGATGGGGACGGTGACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAATCGATACGAACGACGTATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGATGGATTCACTTTTGGCATAGCGTTTTCGTCGAAGGAAGCTTTCTTTCAGGATCAGATTCAATTTTCGCCTTGTGATAGTCGTCTCGCTTTGATATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAAGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCAGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGCAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCGCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAA
Homology
[Close]
BLAST of CmoCh20G008920 vs. TrEMBL
Match: A0A0A0LIV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 3.3e-97
Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 1 

Query: 18  MGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 77
           M  M  + V LVVT+L+LV EGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 78  QFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 137
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 138 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 197
           PV+               EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDCA+ +SKCKY
Sbjct: 121 PVL---------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 198 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 253
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LF+DVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 220

[Close]
BLAST of CmoCh20G008920 vs. TrEMBL
Match: B9RZH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.0e-83
Identity = 145/224 (64.73%), Postives = 186/224 (83.04%), Query Frame = 1 

Query: 24  VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPCD 83
           V V +VVT +++ A   D+NDV+SPC DAKI+KSDGFTFG+AFSSKE+FF D +Q SPCD
Sbjct: 8   VAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCD 67

Query: 84  SRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 143
           SRLAL  K  QLA+FRPKVD++SLLTINS+TFNP M+GGYMVAFAG KYAARS PVM+ D
Sbjct: 68  SRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVAD 127

Query: 144 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSVD 203
           N   +TSFTLV EFQ+G LQNL+WK +GC+KC+ DF VCL+ +DCAV +SKC+ +GG +D
Sbjct: 128 NGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHID 187

Query: 204 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTV 248
           CN+ +QL FSGTD+NLE LNSW+EV NL ++SL+ L++++R ++
Sbjct: 188 CNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

[Close]
BLAST of CmoCh20G008920 vs. TrEMBL
Match: A0A068TMF3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.7e-82
Identity = 142/228 (62.28%), Postives = 190/228 (83.33%), Query Frame = 1 

Query: 24  VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPCD 83
           V +++ +  ++L     DTN  + PC DAK+Q+SDGF+FG+AFSSK++FF +Q Q SPCD
Sbjct: 6   VFIMVEMLAMMLAVHAGDTNPEFDPCSDAKVQRSDGFSFGLAFSSKDSFFFNQTQLSPCD 65

Query: 84  SRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 143
            RL+L  K+ QLA+FRPKVD++SLLTINS+TF+P  +GGYMVAFAG +YAARS+PV + D
Sbjct: 66  QRLSLSAKSAQLAIFRPKVDEMSLLTINSSTFDPRNSGGYMVAFAGRRYAARSIPVFVAD 125

Query: 144 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSVD 203
           N+ T+TSFTLV EFQ+GTLQNLFWKKYGC+ C+GD  VC++N DCA+ +SKCK +GGS+D
Sbjct: 126 NAQTVTSFTLVLEFQKGTLQNLFWKKYGCDACSGDSFVCMNNTDCAIRNSKCKGNGGSLD 185

Query: 204 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 252
           CNI IQLAFSGTD+N +VLNSW+EV NL ++SL+ L++D+RD++T+PF
Sbjct: 186 CNIGIQLAFSGTDKNDDVLNSWYEVSNLRQYSLYALYSDLRDSLTSPF 233

[Close]
BLAST of CmoCh20G008920 vs. TrEMBL
Match: W9RPN2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027004 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 145/235 (61.70%), Postives = 193/235 (82.13%), Query Frame = 1 

Query: 13  MSEGRMGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAF 72
           M+E  M  +  +T++L+V ++  VAE  DTNDVY PC D+K+QK DGFTFG+AFS+KE+F
Sbjct: 1   MAESEMIMIMMITLILMV-MINFVAEAADTNDVYDPCSDSKVQKLDGFTFGLAFSTKESF 60

Query: 73  FQDQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKY 132
           F +Q Q SPCD RL+L   N+QLA+FRPKVD++SLL+I+  TF+PA +GGYMVAFAG  Y
Sbjct: 61  FFNQTQLSPCDKRLSLSDSNSQLAVFRPKVDEISLLSIDGNTFDPATSGGYMVAFAGRNY 120

Query: 133 AARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSS 192
           AARS P+++ D++H+ITSFTLV EFQ GTLQNL+WKK+GC+KC+G   VCL+ QDCAV +
Sbjct: 121 AARSQPILVADSTHSITSFTLVLEFQSGTLQNLYWKKFGCDKCSGGPFVCLNEQDCAVPN 180

Query: 193 SKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTV 248
           SKCK +GG+ DCN+SIQL FSGTD+NL+ LNSW+EV NL ++SLF LF++VR+++
Sbjct: 181 SKCKSNGGTFDCNLSIQLTFSGTDKNLDALNSWYEVKNLRQYSLFGLFSNVRNSI 234

[Close]
BLAST of CmoCh20G008920 vs. TrEMBL
Match: K4D0K1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 8.1e-80
Identity = 139/234 (59.40%), Postives = 188/234 (80.34%), Query Frame = 1 

Query: 21  MGTVTVVLVVTVLVLVAEGI---DTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 80
           MGT+ VVL++   +++ + +   DTN V+ PC D ++Q+ DGFTFG+ FSSKE+FF ++ 
Sbjct: 1   MGTILVVLILVSTMVMMDNVYAGDTNSVFDPCSDTRVQRWDGFTFGLVFSSKESFFFNET 60

Query: 81  QFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 140
           Q SPCD RL+L   + +LA+FRPKVD++SLL IN++ FNP+ +GGYMVAFAG KYAARSL
Sbjct: 61  QLSPCDRRLSLTGNSAELAVFRPKVDEISLLKINNSNFNPSKSGGYMVAFAGRKYAARSL 120

Query: 141 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 200
           P  + D++HT+TSFTLV EFQ+GTLQNLFWKK+GC+ C GD  VCL+  DCAV ++KC  
Sbjct: 121 PAFVADSTHTVTSFTLVLEFQKGTLQNLFWKKFGCDSCKGDSFVCLNKTDCAVPNNKCNG 180

Query: 201 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 252
           +GGS+DC++SIQLAFSGTD+N +VLNSW+EV NL ++SL+ LF DV D++T+PF
Sbjct: 181 NGGSIDCDVSIQLAFSGTDKNEDVLNSWYEVKNLRQYSLYGLFQDVSDSLTSPF 234

[Close]
BLAST of CmoCh20G008920 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 271.9 bits (694), Expect = 3.9e-73
Identity = 137/261 (52.49%), Postives = 185/261 (70.88%), Query Frame = 1 

Query: 3   FFPSLYMVKMMSEGRMGAMGTVTVVLVVTVLVLVAEGI---DTNDVYSPCLDAKIQKSDG 62
           FF  L +     + ++    + T+++++ ++++V + +   D N VYSPC D +I K DG
Sbjct: 103 FFGLLMVFLGKKKTKLRMRNSTTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDG 162

Query: 63  FTFGIAFSSKEAFFQDQIQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAM 122
           FT GIA SSKEAFF DQ+Q SPCD+RL L  K  QLALFRPKVD++SLL+I+++ FNP+ 
Sbjct: 163 FTIGIAISSKEAFFLDQVQLSPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSE 222

Query: 123 NGGYMVAFAGLKYAARSLPVMITDNSHTITSFT---------LVFEFQRGTLQNLFWKKY 182
            GG+MV FAG KYAARS PV + D S+TIT+FT         LV EFQ+G LQNLFWK +
Sbjct: 223 AGGFMVGFAGSKYAARSYPVKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSF 282

Query: 183 GCEKCTG---DFSVCLDNQDCAVSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFE 242
           GC+ C G     SVCL+  DCAV +SKCK +GG  +CNI IQ+AFSGTDRNLE LN+W+E
Sbjct: 283 GCDLCKGTGSSSSVCLNGTDCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYE 342

Query: 243 VDNLMRFSLFKLFADVRDTVT 249
           V+NL ++SL  L+A+  D+++
Sbjct: 343 VNNLRQYSLTDLYANAVDSLS 363

[Close]
BLAST of CmoCh20G008920 vs. TAIR10
Match: AT3G44150.1 (AT3G44150.1 unknown protein)

HSP 1 Score: 264.6 bits (675), Expect = 6.2e-71
Identity = 128/237 (54.01%), Postives = 181/237 (76.37%), Query Frame = 1 

Query: 23  TVTVVLVVTVLVLVAEGID------TNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQ 82
           T+T+++   V++ VA G D      TN +YSPC D +IQ+SDGFTFGIAFSS+ +FF +Q
Sbjct: 6   TLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQ 65

Query: 83  -IQFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAAR 142
            +  SPCD RL+L   N+Q ++FRPK+D++SLL+IN++ F P   GGYMVAFAG KYAAR
Sbjct: 66  TVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGRKYAAR 125

Query: 143 SLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFS-VCLDNQDCAVSSSK 202
           S+P  I +++  +TSFTLV EFQ+G LQNL+WK+ GC  C G+ + VCL+ QDCA+ +  
Sbjct: 126 SIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCAIRTPS 185

Query: 203 CKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 252
           CK  GG+VDC++ IQLAFSGTD++L VLNSW+EV+NL ++SL+ L+++++ ++TN F
Sbjct: 186 CKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQF 242

[Close]
BLAST of CmoCh20G008920 vs. TAIR10
Match: AT3G11800.1 (AT3G11800.1 unknown protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.8e-70
Identity = 121/224 (54.02%), Postives = 169/224 (75.45%), Query Frame = 1 

Query: 36  VAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQ----IQFSPCDSRLALIYK 95
           + E  D N VYSPC D+ +   DGFTFGIAF++K++FF       +Q+SPCD R   +  
Sbjct: 19  LTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNG 78

Query: 96  NTQLALFRPKVDQLSLLTIN---STTFNPAMNGGYMVAFAGLKYAARSLPVMITDNSHTI 155
           N+++A+FRPKVD+++LLTIN   S++F P  + GYMVAFAG KYAARSLP+M+ D++H +
Sbjct: 79  NSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIV 138

Query: 156 TSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFS-VCLDNQDCAVSSSKCKYHGGSVDCNIS 215
           TSFTLV EFQ+G L+N+FWKK GC KC+GD   VCL+ ++CA+    CK  GG VDC++ 
Sbjct: 139 TSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLG 198

Query: 216 IQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPF 252
           IQLAFSGTD++   LNSW+EV NL ++SL+ L+++++D++TNPF
Sbjct: 199 IQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPF 242

[Close]
BLAST of CmoCh20G008920 vs. NCBI nr
Match: gi|659118650|ref|XP_008459230.1| (PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 2.2e-110
Identity = 191/235 (81.28%), Postives = 220/235 (93.62%), Query Frame = 1 

Query: 18  MGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 77
           M  M  + V LVVT+L+LVAEGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 78  QFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 137
           QFSPCD+RL+L  KN QLA+FRPKVDQLS LTI+++TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 138 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 197
           PVM+TDNSHTITSFTLVFEF+RGTLQNLFWKK+GC+KC+GDFS+C+DNQDCA+ SSKCKY
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 198 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 253
            GGSVDCN+ IQLAFSGTD+NLEVLNSW+E+DNL RFSL++LF+DVRDTVTNPFG
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]
BLAST of CmoCh20G008920 vs. NCBI nr
Match: gi|778669190|ref|XP_011649210.1| (PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.3e-107
Identity = 189/235 (80.43%), Postives = 216/235 (91.91%), Query Frame = 1 

Query: 18  MGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 77
           M  M  + V LVVT+L+LV EGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 78  QFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 137
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 138 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 197
           PVMITDNS+TITSFTLV EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDCA+ +SKCKY
Sbjct: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 198 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 253
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LF+DVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]
BLAST of CmoCh20G008920 vs. NCBI nr
Match: gi|700206629|gb|KGN61748.1| (hypothetical protein Csa_2G237180 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 4.7e-97
Identity = 175/235 (74.47%), Postives = 202/235 (85.96%), Query Frame = 1 

Query: 18  MGAMGTVTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQI 77
           M  M  + V LVVT+L+LV EGIDTNDVYSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 78  QFSPCDSRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 137
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 138 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKY 197
           PV+               EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDCA+ +SKCKY
Sbjct: 121 PVL---------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 198 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTVTNPFG 253
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LF+DVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 220

[Close]
BLAST of CmoCh20G008920 vs. NCBI nr
Match: gi|223541809|gb|EEF43357.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 315.5 bits (807), Expect = 8.6e-83
Identity = 145/224 (64.73%), Postives = 186/224 (83.04%), Query Frame = 1 

Query: 24  VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPCD 83
           V V +VVT +++ A   D+NDV+SPC DAKI+KSDGFTFG+AFSSKE+FF D +Q SPCD
Sbjct: 8   VAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCD 67

Query: 84  SRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 143
           SRLAL  K  QLA+FRPKVD++SLLTINS+TFNP M+GGYMVAFAG KYAARS PVM+ D
Sbjct: 68  SRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVAD 127

Query: 144 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSVD 203
           N   +TSFTLV EFQ+G LQNL+WK +GC+KC+ DF VCL+ +DCAV +SKC+ +GG +D
Sbjct: 128 NGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHID 187

Query: 204 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTV 248
           CN+ +QL FSGTD+NLE LNSW+EV NL ++SL+ L++++R ++
Sbjct: 188 CNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

[Close]
BLAST of CmoCh20G008920 vs. NCBI nr
Match: gi|1000966600|ref|XP_002519146.2| (PREDICTED: uncharacterized protein LOC8275556 isoform X1 [Ricinus communis])

HSP 1 Score: 315.5 bits (807), Expect = 8.6e-83
Identity = 145/224 (64.73%), Postives = 186/224 (83.04%), Query Frame = 1 

Query: 24  VTVVLVVTVLVLVAEGIDTNDVYSPCLDAKIQKSDGFTFGIAFSSKEAFFQDQIQFSPCD 83
           V V +VVT +++ A   D+NDV+SPC DAKI+KSDGFTFG+AFSSKE+FF D +Q SPCD
Sbjct: 18  VAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCD 77

Query: 84  SRLALIYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 143
           SRLAL  K  QLA+FRPKVD++SLLTINS+TFNP M+GGYMVAFAG KYAARS PVM+ D
Sbjct: 78  SRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVAD 137

Query: 144 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCAVSSSKCKYHGGSVD 203
           N   +TSFTLV EFQ+G LQNL+WK +GC+KC+ DF VCL+ +DCAV +SKC+ +GG +D
Sbjct: 138 NGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHID 197

Query: 204 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFADVRDTV 248
           CN+ +QL FSGTD+NLE LNSW+EV NL ++SL+ L++++R ++
Sbjct: 198 CNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 240

The following BLAST results are available for this feature:
BLAST of CmoCh20G008920 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh20G008920 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIV3_CUCSA3.3e-9774.47Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1[more]
B9RZH7_RICCO6.0e-8364.73Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1[more]
A0A068TMF3_COFCA1.7e-8262.28Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1[more]
W9RPN2_9ROSA1.9e-8161.70Uncharacterized protein OS=Morus notabilis GN=L484_027004 PE=4 SV=1[more]
K4D0K1_SOLLC8.1e-8059.40Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of CmoCh20G008920 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15910.13.9e-7352.49 CSL zinc finger domain-containing protein[more]
AT3G44150.16.2e-7154.01 unknown protein[more]
AT3G11800.11.8e-7054.02 unknown protein[more]
BLAST of CmoCh20G008920 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118650|ref|XP_008459230.1|2.2e-11081.28PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo][more]
gi|778669190|ref|XP_011649210.1|1.3e-10780.43PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus][more]
gi|700206629|gb|KGN61748.1|4.7e-9774.47hypothetical protein Csa_2G237180 [Cucumis sativus][more]
gi|223541809|gb|EEF43357.1|8.6e-8364.73conserved hypothetical protein [Ricinus communis][more]
gi|1000966600|ref|XP_002519146.2|8.6e-8364.73PREDICTED: uncharacterized protein LOC8275556 isoform X1 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G008920.1CmoCh20G008920.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 24..251
score: 6.5E
NoneNo IPR availablePANTHERPTHR21454:SF9SUBFAMILY NOT NAMEDcoord: 24..251
score: 6.5E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G008920Cucsa.110010Cucumber (Gy14) v1cgycmoB0252
CmoCh20G008920CmaCh20G008850Cucurbita maxima (Rimu)cmacmoB551
CmoCh20G008920CmaCh02G004310Cucurbita maxima (Rimu)cmacmoB606
CmoCh20G008920Cla010277Watermelon (97103) v1cmowmB502
CmoCh20G008920Csa2G237180Cucumber (Chinese Long) v2cmocuB531
CmoCh20G008920MELO3C021927Melon (DHL92) v3.5.1cmomeB483
CmoCh20G008920ClCG09G017660Watermelon (Charleston Gray)cmowcgB472
CmoCh20G008920CSPI02G11770Wild cucumber (PI 183967)cmocpiB536
CmoCh20G008920Lsi10G003210Bottle gourd (USVL1VR-Ls)cmolsiB491
CmoCh20G008920Cp4.1LG16g02100Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G008920Cp4.1LG05g12320Cucurbita pepo (Zucchini)cmocpeB534
CmoCh20G008920MELO3C021927.2Melon (DHL92) v3.6.1cmomedB563
CmoCh20G008920CsaV3_2G014260Cucumber (Chinese Long) v3cmocucB0637
CmoCh20G008920Cla97C09G179060Watermelon (97103) v2cmowmbB574
CmoCh20G008920CsGy2G011800Cucumber (Gy14) v2cgybcmoB209
CmoCh20G008920Carg22971Silver-seed gourdcarcmoB1203
CmoCh20G008920Carg23621Silver-seed gourdcarcmoB1073
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G008920CmoCh02G004330Cucurbita moschata (Rifu)cmocmoB404
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G008920Wax gourdcmowgoB0679
CmoCh20G008920Wax gourdcmowgoB0693
CmoCh20G008920Cucurbita moschata (Rifu)cmocmoB382
CmoCh20G008920Cucurbita maxima (Rimu)cmacmoB518
CmoCh20G008920Watermelon (Charleston Gray)cmowcgB485
CmoCh20G008920Cucurbita pepo (Zucchini)cmocpeB514