CmaCh20G008850 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh20G008850
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionCSL zinc finger domain-containing protein
LocationCma_Chr20 : 4251850 .. 4254509 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTCTTTTGTTGCTCTGATTCAAATGGCTTCTGGAAGAACAAGAAGCCTGCAATACAATTTCATTTGTATTGCTATCTCCTCCGAATCCTACAGGTATGGATTAACCTTTCCTTTTGGTTTTGCTTGAACCAAAAGTCGATTTCGCTCTTCCTTTTCACATTTCTAGGGATTTTCACCCTCTGATTTTGCATATTTAGAATATCAATATTGGAAATCTTGCAATCCCTGTTGATTTGTGGATTTGGATGCTTTTTTTTTCCCTCGTTGTAGATGGTGAAGATGATAAGTGAAGGTAGAATGGGTGCGATGAGGACGGTAACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAACGGATACGAACGAAATATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCCTAGCGTTTTCGTCGAAGGAAGCGTTCTTTCAGGATCAGATTCAATTTTCGCCATGTGATAGTCGTCTCGCTTTGGTATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAGGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGTACGTCTGTGATTCATCTCTTCACAATGTTTATCTCATACTATTTTCATCGATGAAAATTGATTTCGTTTTAACCATTTCCATTGATTTCGTTTCTTCCCCTGTTTTACCAAGAACATGAACTGTAGACAATTATAGAATAACACGATTTAAGAATTTGAATCTCGACCTGATTTATGTTCAATATGGCTTTTCATATTTATTCTCTATGATAATTATTGAAGAATGACAAAATCAGATAGAGTTATTTTTTTTTATATAGAGAATCACAATTCAAACAAGGGGGTATGGATTAGCAAAACACATAGATGATTCTTTTTCCTGTTTCTAGTACAAGTATGAACAGGGGAGGATTTTACTTCCACTCTAAAGGTTTATTTGTACGAGTATGAATTATTCACCGGCTGTTGTAAGTTGTCATATAACTCTAGTTTAGTCATAATACTGGTTCATATTTTAATTTATTTTAGTTATTAATTCTCTACGTGAATGGAATCAGATGATTCATGTATTACATTATTACTTCTAATGCCTATACAAAAGTTTGTCTAGCATTATTTTGAAACGTAGAATCATTTTCATTTTATATTTGTAGAGTGGAATTTGAATTAGATGTGGATTCATTGTCATTTTGTATTTGTCTAGAGGCAATTGGAAGAAATTTAGTAACTTAGTAAGAGAGACTTTATAGCATTAGATTGTGATAGATACACTTGTAAACACTTTGGTTATTGTGATTTGGCTAACATCCGTGGATTTAGAGGAATTTCTTCCCTCCTAACCACGTAAATTTTTGTGTCTATTTGTTCAATTTCTGTTTGTAGATGTGTGAGTACAGCTAAACAATTGGGTATCAAGACATTTTAGTCGTGGCATTTTGGTACAACAATTAGACAATGATGATACATAAAATGGATGACAACTCATCCAACTAGGGTTATGTTCTACCAATTAGAAATACGTGTAGTTACAGTTGGAAACATTTGTAAAGGTAGCACAAAGTAGAGAAAAAAACCTCTCCAAATCATACACTTTAAACAATTTTTTTCATTTGTCGCACCCACATTAGAAATACGTGTAGTTAGCGGTAGCACAAAGTAGAGAAAAAAACCTCTCCAAATCATACACACTTTAAACAATTTTTTTCATTGGTCGCACCCACATTAGAAATATGTGCAGTTAGCGGTAGCACAAAGGAGAGAAAAAAACCTCTCCAAATCATACACTTTAAACAATTTTTTTCATTGGTTGAACCGTGGGTGGGTCACTAACTTTTTAAATGTTGAAACAATGAACTAATGGAAGATTTTGGTGGATGATTTGATTATATGATTGTTAGAAAGGAAAAGTTCAAATGAATATGATTCGTGGTGGTTTGCAGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCTGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTAAGCCCATAAACCACCATTTACCATCGCGATGATACCCACCACCATTGTGATAACAGTTAAGTGTTGCTTGTGTCAATGTTGTACCCAGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGTAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCTCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAAAATTCTTCATCTCTGTAGGCAAGGAACCAATATTCTTCATCATAGCTCAGAGCTATGATCTACATTTTGTTAGATATTGTACAATCTTGAAGATTCAACACACACACATATATATACATGGTGCAGCATAATACCATTGAATTTTATGGCTAAACTGTATTGATATTAATCAAATCTGTT

mRNA sequence

TTTTTCTTTTGTTGCTCTGATTCAAATGGCTTCTGGAAGAACAAGAAGCCTGCAATACAATTTCATTTGTATTGCTATCTCCTCCGAATCCTACAGATGGTGAAGATGATAAGTGAAGGTAGAATGGGTGCGATGAGGACGGTAACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAACGGATACGAACGAAATATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCCTAGCGTTTTCGTCGAAGGAAGCGTTCTTTCAGGATCAGATTCAATTTTCGCCATGTGATAGTCGTCTCGCTTTGGTATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAGGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCTGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGTAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCTCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAAAATTCTTCATCTCTGTAGGCAAGGAACCAATATTCTTCATCATAGCTCAGAGCTATGATCTACATTTTGTTAGATATTGTACAATCTTGAAGATTCAACACACACACATATATATACATGGTGCAGCATAATACCATTGAATTTTATGGCTAAACTGTATTGATATTAATCAAATCTGTT

Coding sequence (CDS)

ATGGTGAAGATGATAAGTGAAGGTAGAATGGGTGCGATGAGGACGGTAACAGTGGTTTTGGTTGTGACGGTGCTGGTTTTGGTTGCGGAAGGAACGGATACGAACGAAATATACAGTCCATGTTTGGATGCGAAGATTCAGAAATCAGACGGATTTACTTTTGGCCTAGCGTTTTCGTCGAAGGAAGCGTTCTTTCAGGATCAGATTCAATTTTCGCCATGTGATAGTCGTCTCGCTTTGGTATACAAAAACACTCAACTTGCCCTTTTCAGGCCTAAGGTCGACCAGCTCTCTTTACTCACCATTAATAGTACGACTTTCAATCCGGCTATGAATGGTGGGTATATGGTAGCATTTGCTGGGCTGAAGTATGCAGCAAGATCTCTCCCTGTAATGATTACCGATAACTCTCACACCATAACTAGTTTCACTTTGGTTTTTGAATTTCAAAGGGGCACTCTTCAAAACCTGTTCTGGAAGAAATATGGATGCGAGAAATGCACTGGGGATTTTTCAGTGTGTCTGGACAACCAAGACTGTGTAGTTTCGAGCTCCAAATGCAAGTACCATGGCGGTTCTGTTGACTGCAATATAAGCATACAACTAGCATTTTCAGGGACAGACAGGAACCTGGAAGTCCTCAACTCCTGGTTTGAAGTTGACAATCTCATGCGCTTCTCCCTCTTCAAACTTTTCTCTGATGTTCGTGATACCGTCACCAATCCATTCGGGTAA

Protein sequence

MVKMISEGRMGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG
Homology
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BLAST of CmaCh20G008850 vs. TrEMBL
Match: A0A0A0LIV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 1.2e-96
Identity = 173/235 (73.62%), Postives = 201/235 (85.53%), Query Frame = 1 

Query: 10  MGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQI 69
           M  MR + V LVVT+L+LV EG DTN++YSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 70  QFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 129
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 130 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKY 189
           PV+               EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDC + +SKCKY
Sbjct: 121 PVL---------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 190 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG 245
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LFSDVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 220

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BLAST of CmaCh20G008850 vs. TrEMBL
Match: A0A068TMF3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 7.6e-83
Identity = 143/228 (62.72%), Postives = 189/228 (82.89%), Query Frame = 1 

Query: 16  VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCD 75
           V +++ +  ++L     DTN  + PC DAK+Q+SDGF+FGLAFSSK++FF +Q Q SPCD
Sbjct: 6   VFIMVEMLAMMLAVHAGDTNPEFDPCSDAKVQRSDGFSFGLAFSSKDSFFFNQTQLSPCD 65

Query: 76  SRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 135
            RL+L  K+ QLA+FRPKVD++SLLTINS+TF+P  +GGYMVAFAG +YAARS+PV + D
Sbjct: 66  QRLSLSAKSAQLAIFRPKVDEMSLLTINSSTFDPRNSGGYMVAFAGRRYAARSIPVFVAD 125

Query: 136 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVD 195
           N+ T+TSFTLV EFQ+GTLQNLFWKKYGC+ C+GD  VC++N DC + +SKCK +GGS+D
Sbjct: 126 NAQTVTSFTLVLEFQKGTLQNLFWKKYGCDACSGDSFVCMNNTDCAIRNSKCKGNGGSLD 185

Query: 196 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPF 244
           CNI IQLAFSGTD+N +VLNSW+EV NL ++SL+ L+SD+RD++T+PF
Sbjct: 186 CNIGIQLAFSGTDKNDDVLNSWYEVSNLRQYSLYALYSDLRDSLTSPF 233

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BLAST of CmaCh20G008850 vs. TrEMBL
Match: B9RZH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-82
Identity = 144/224 (64.29%), Postives = 185/224 (82.59%), Query Frame = 1 

Query: 16  VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCD 75
           V V +VVT +++ A   D+N+++SPC DAKI+KSDGFTFGLAFSSKE+FF D +Q SPCD
Sbjct: 8   VAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCD 67

Query: 76  SRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 135
           SRLAL  K  QLA+FRPKVD++SLLTINS+TFNP M+GGYMVAFAG KYAARS PVM+ D
Sbjct: 68  SRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVAD 127

Query: 136 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVD 195
           N   +TSFTLV EFQ+G LQNL+WK +GC+KC+ DF VCL+ +DC V +SKC+ +GG +D
Sbjct: 128 NGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHID 187

Query: 196 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTV 240
           CN+ +QL FSGTD+NLE LNSW+EV NL ++SL+ L+S++R ++
Sbjct: 188 CNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

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BLAST of CmaCh20G008850 vs. TrEMBL
Match: W9RPN2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027004 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.1e-81
Identity = 143/235 (60.85%), Postives = 192/235 (81.70%), Query Frame = 1 

Query: 5   ISEGRMGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAF 64
           ++E  M  +  +T++L+V ++  VAE  DTN++Y PC D+K+QK DGFTFGLAFS+KE+F
Sbjct: 1   MAESEMIMIMMITLILMV-MINFVAEAADTNDVYDPCSDSKVQKLDGFTFGLAFSTKESF 60

Query: 65  FQDQIQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKY 124
           F +Q Q SPCD RL+L   N+QLA+FRPKVD++SLL+I+  TF+PA +GGYMVAFAG  Y
Sbjct: 61  FFNQTQLSPCDKRLSLSDSNSQLAVFRPKVDEISLLSIDGNTFDPATSGGYMVAFAGRNY 120

Query: 125 AARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSS 184
           AARS P+++ D++H+ITSFTLV EFQ GTLQNL+WKK+GC+KC+G   VCL+ QDC V +
Sbjct: 121 AARSQPILVADSTHSITSFTLVLEFQSGTLQNLYWKKFGCDKCSGGPFVCLNEQDCAVPN 180

Query: 185 SKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTV 240
           SKCK +GG+ DCN+SIQL FSGTD+NL+ LNSW+EV NL ++SLF LFS+VR+++
Sbjct: 181 SKCKSNGGTFDCNLSIQLTFSGTDKNLDALNSWYEVKNLRQYSLFGLFSNVRNSI 234

[Close]
BLAST of CmaCh20G008850 vs. TrEMBL
Match: M5W1H2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026636mg PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.6e-80
Identity = 143/210 (68.10%), Postives = 174/210 (82.86%), Query Frame = 1 

Query: 24  VLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCDSRLALVYK 83
           ++V V +  DTN +Y PC DAKI++ DGFTFGLAFS K++F  +Q Q SPCDSRL L   
Sbjct: 1   MMVFVGDAADTNSVYDPCSDAKIRRLDGFTFGLAFSKKDSFAFNQTQLSPCDSRLNLAGN 60

Query: 84  NTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITDNSHTITSF 143
           N QLA+FRPKVD++SLLTINS+TF+P   GGYMVAFAG KYAARSLP +I D S+TITSF
Sbjct: 61  NAQLAVFRPKVDEMSLLTINSSTFSPINAGGYMVAFAGRKYAARSLPTLIADESNTITSF 120

Query: 144 TLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVDCNISIQLA 203
           TLV EFQRGTLQNL+WKK+GC+ C+GD+SVCL+N+DC V +SKCK  GGS DCN+SIQLA
Sbjct: 121 TLVLEFQRGTLQNLYWKKFGCKACSGDYSVCLNNEDCAVPNSKCKSSGGSFDCNLSIQLA 180

Query: 204 FSGTDRNLEVLNSWFEVDNLMRFSLFKLFS 234
           FSGTD++L+VLNSW+EV NL  +SL+ LFS
Sbjct: 181 FSGTDKHLQVLNSWYEVRNLRSYSLYGLFS 210

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BLAST of CmaCh20G008850 vs. TAIR10
Match: AT2G15910.1 (AT2G15910.1 CSL zinc finger domain-containing protein)

HSP 1 Score: 270.0 bits (689), Expect = 1.4e-72
Identity = 132/244 (54.10%), Postives = 176/244 (72.13%), Query Frame = 1 

Query: 13  MRTVTVVLVVTVLVLVAE----GTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQ 72
           MR  T ++++ ++V++ +      D N +YSPC D +I K DGFT G+A SSKEAFF DQ
Sbjct: 120 MRNSTTIMMIMMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAFFLDQ 179

Query: 73  IQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARS 132
           +Q SPCD+RL L  K  QLALFRPKVD++SLL+I+++ FNP+  GG+MV FAG KYAARS
Sbjct: 180 VQLSPCDTRLGLAAKMAQLALFRPKVDEISLLSIDTSKFNPSEAGGFMVGFAGSKYAARS 239

Query: 133 LPVMITDNSHTITSFT---------LVFEFQRGTLQNLFWKKYGCEKCTG---DFSVCLD 192
            PV + D S+TIT+FT         LV EFQ+G LQNLFWK +GC+ C G     SVCL+
Sbjct: 240 YPVKVADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLN 299

Query: 193 NQDCVVSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVR 241
             DC V +SKCK +GG  +CNI IQ+AFSGTDRNLE LN+W+EV+NL ++SL  L+++  
Sbjct: 300 GTDCAVPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAV 359

[Close]
BLAST of CmaCh20G008850 vs. TAIR10
Match: AT3G44150.1 (AT3G44150.1 unknown protein)

HSP 1 Score: 266.2 bits (679), Expect = 2.0e-71
Identity = 129/242 (53.31%), Postives = 183/242 (75.62%), Query Frame = 1 

Query: 10  MGAMRTVTVVLVVTVLVLVAEGTD------TNEIYSPCLDAKIQKSDGFTFGLAFSSKEA 69
           M + +T+T+++   V++ VA G D      TN IYSPC D +IQ+SDGFTFG+AFSS+ +
Sbjct: 1   MFSSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPS 60

Query: 70  FFQDQ-IQFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGL 129
           FF +Q +  SPCD RL+L   N+Q ++FRPK+D++SLL+IN++ F P   GGYMVAFAG 
Sbjct: 61  FFINQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPDNYGGYMVAFAGR 120

Query: 130 KYAARSLPVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFS-VCLDNQDCV 189
           KYAARS+P  I +++  +TSFTLV EFQ+G LQNL+WK+ GC  C G+ + VCL+ QDC 
Sbjct: 121 KYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDCA 180

Query: 190 VSSSKCKYHGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTN 244
           + +  CK  GG+VDC++ IQLAFSGTD++L VLNSW+EV+NL ++SL+ L+S+++ ++TN
Sbjct: 181 IRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTN 240

[Close]
BLAST of CmaCh20G008850 vs. TAIR10
Match: AT3G11800.1 (AT3G11800.1 unknown protein)

HSP 1 Score: 263.5 bits (672), Expect = 1.3e-70
Identity = 119/224 (53.12%), Postives = 169/224 (75.45%), Query Frame = 1 

Query: 28  VAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQ----IQFSPCDSRLALVYK 87
           + E  D N++YSPC D+ +   DGFTFG+AF++K++FF       +Q+SPCD R   +  
Sbjct: 19  LTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRHLSLNG 78

Query: 88  NTQLALFRPKVDQLSLLTIN---STTFNPAMNGGYMVAFAGLKYAARSLPVMITDNSHTI 147
           N+++A+FRPKVD+++LLTIN   S++F P  + GYMVAFAG KYAARSLP+M+ D++H +
Sbjct: 79  NSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVADSNHIV 138

Query: 148 TSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFS-VCLDNQDCVVSSSKCKYHGGSVDCNIS 207
           TSFTLV EFQ+G L+N+FWKK GC KC+GD   VCL+ ++C +    CK  GG VDC++ 
Sbjct: 139 TSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQVDCSLG 198

Query: 208 IQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPF 244
           IQLAFSGTD++   LNSW+EV NL ++SL+ L+S+++D++TNPF
Sbjct: 199 IQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPF 242

[Close]
BLAST of CmaCh20G008850 vs. NCBI nr
Match: gi|659118650|ref|XP_008459230.1| (PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo])

HSP 1 Score: 405.6 bits (1041), Expect = 6.1e-110
Identity = 189/235 (80.43%), Postives = 219/235 (93.19%), Query Frame = 1 

Query: 10  MGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQI 69
           M  MR + V LVVT+L+LVAEG DTN++YSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MSPMRMMIVALVVTLLLLVAEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 70  QFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 129
           QFSPCD+RL+L  KN QLA+FRPKVDQLS LTI+++TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDARLSLASKNAQLAVFRPKVDQLSFLTIDTSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 130 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKY 189
           PVM+TDNSHTITSFTLVFEF+RGTLQNLFWKK+GC+KC+GDFS+C+DNQDC + SSKCKY
Sbjct: 121 PVMVTDNSHTITSFTLVFEFERGTLQNLFWKKFGCDKCSGDFSLCVDNQDCAILSSKCKY 180

Query: 190 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG 245
            GGSVDCN+ IQLAFSGTD+NLEVLNSW+E+DNL RFSL++LFSDVRDTVTNPFG
Sbjct: 181 SGGSVDCNLGIQLAFSGTDKNLEVLNSWYEIDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]
BLAST of CmaCh20G008850 vs. NCBI nr
Match: gi|778669190|ref|XP_011649210.1| (PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus])

HSP 1 Score: 396.4 bits (1017), Expect = 3.7e-107
Identity = 187/235 (79.57%), Postives = 215/235 (91.49%), Query Frame = 1 

Query: 10  MGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQI 69
           M  MR + V LVVT+L+LV EG DTN++YSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 70  QFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 129
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 130 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKY 189
           PVMITDNS+TITSFTLV EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDC + +SKCKY
Sbjct: 121 PVMITDNSNTITSFTLVLEFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 190 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG 245
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LFSDVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 235

[Close]
BLAST of CmaCh20G008850 vs. NCBI nr
Match: gi|700206629|gb|KGN61748.1| (hypothetical protein Csa_2G237180 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-96
Identity = 173/235 (73.62%), Postives = 201/235 (85.53%), Query Frame = 1 

Query: 10  MGAMRTVTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQI 69
           M  MR + V LVVT+L+LV EG DTN++YSPCLD+KIQ+SDGFTFG+AFSSKE+FFQDQI
Sbjct: 1   MRPMRIMIVALVVTLLLLVVEGIDTNDVYSPCLDSKIQRSDGFTFGVAFSSKESFFQDQI 60

Query: 70  QFSPCDSRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSL 129
           QFSPCD+RL+L  K  QL +FRPKVDQLS LTINS+TFNPA+NGGYMVAFAG KYAARSL
Sbjct: 61  QFSPCDTRLSLASKMAQLVVFRPKVDQLSFLTINSSTFNPALNGGYMVAFAGQKYAARSL 120

Query: 130 PVMITDNSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKY 189
           PV+               EFQRG LQNLFWKK+GC+KC+GDFS+C+DNQDC + +SKCKY
Sbjct: 121 PVL---------------EFQRGILQNLFWKKFGCDKCSGDFSLCVDNQDCAIPNSKCKY 180

Query: 190 HGGSVDCNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPFG 245
           +GGSVDCN+ IQLAFSGTD+NLEVLNSW+EVDNL RFSL++LFSDVRDTVTNPFG
Sbjct: 181 NGGSVDCNLGIQLAFSGTDKNLEVLNSWYEVDNLRRFSLYQLFSDVRDTVTNPFG 220

[Close]
BLAST of CmaCh20G008850 vs. NCBI nr
Match: gi|661899130|emb|CDO97124.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 315.1 bits (806), Expect = 1.1e-82
Identity = 143/228 (62.72%), Postives = 189/228 (82.89%), Query Frame = 1 

Query: 16  VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCD 75
           V +++ +  ++L     DTN  + PC DAK+Q+SDGF+FGLAFSSK++FF +Q Q SPCD
Sbjct: 6   VFIMVEMLAMMLAVHAGDTNPEFDPCSDAKVQRSDGFSFGLAFSSKDSFFFNQTQLSPCD 65

Query: 76  SRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 135
            RL+L  K+ QLA+FRPKVD++SLLTINS+TF+P  +GGYMVAFAG +YAARS+PV + D
Sbjct: 66  QRLSLSAKSAQLAIFRPKVDEMSLLTINSSTFDPRNSGGYMVAFAGRRYAARSIPVFVAD 125

Query: 136 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVD 195
           N+ T+TSFTLV EFQ+GTLQNLFWKKYGC+ C+GD  VC++N DC + +SKCK +GGS+D
Sbjct: 126 NAQTVTSFTLVLEFQKGTLQNLFWKKYGCDACSGDSFVCMNNTDCAIRNSKCKGNGGSLD 185

Query: 196 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTVTNPF 244
           CNI IQLAFSGTD+N +VLNSW+EV NL ++SL+ L+SD+RD++T+PF
Sbjct: 186 CNIGIQLAFSGTDKNDDVLNSWYEVSNLRQYSLYALYSDLRDSLTSPF 233

[Close]
BLAST of CmaCh20G008850 vs. NCBI nr
Match: gi|223541809|gb|EEF43357.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 314.3 bits (804), Expect = 1.9e-82
Identity = 144/224 (64.29%), Postives = 185/224 (82.59%), Query Frame = 1 

Query: 16  VTVVLVVTVLVLVAEGTDTNEIYSPCLDAKIQKSDGFTFGLAFSSKEAFFQDQIQFSPCD 75
           V V +VVT +++ A   D+N+++SPC DAKI+KSDGFTFGLAFSSKE+FF D +Q SPCD
Sbjct: 8   VAVTVVVTTMIMAANAADSNDVFSPCSDAKIEKSDGFTFGLAFSSKESFFFDHVQLSPCD 67

Query: 76  SRLALVYKNTQLALFRPKVDQLSLLTINSTTFNPAMNGGYMVAFAGLKYAARSLPVMITD 135
           SRLAL  K  QLA+FRPKVD++SLLTINS+TFNP M+GGYMVAFAG KYAARS PVM+ D
Sbjct: 68  SRLALFSKMAQLAVFRPKVDEISLLTINSSTFNPGMSGGYMVAFAGRKYAARSFPVMVAD 127

Query: 136 NSHTITSFTLVFEFQRGTLQNLFWKKYGCEKCTGDFSVCLDNQDCVVSSSKCKYHGGSVD 195
           N   +TSFTLV EFQ+G LQNL+WK +GC+KC+ DF VCL+ +DC V +SKC+ +GG +D
Sbjct: 128 NGIIVTSFTLVLEFQQGILQNLYWKSFGCDKCSKDF-VCLNGKDCAVHNSKCRSNGGHID 187

Query: 196 CNISIQLAFSGTDRNLEVLNSWFEVDNLMRFSLFKLFSDVRDTV 240
           CN+ +QL FSGTD+NLE LNSW+EV NL ++SL+ L+S++R ++
Sbjct: 188 CNLGVQLTFSGTDKNLETLNSWYEVSNLRQYSLYGLYSNLRHSI 230

The following BLAST results are available for this feature:
BLAST of CmaCh20G008850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh20G008850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIV3_CUCSA1.2e-9673.62Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237180 PE=4 SV=1[more]
A0A068TMF3_COFCA7.6e-8362.72Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014367001 PE=4 SV=1[more]
B9RZH7_RICCO1.3e-8264.29Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0939380 PE=4 SV=1[more]
W9RPN2_9ROSA7.1e-8160.85Uncharacterized protein OS=Morus notabilis GN=L484_027004 PE=4 SV=1[more]
M5W1H2_PRUPE4.6e-8068.10Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026636mg PE=4 SV=1[more]
BLAST of CmaCh20G008850 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G15910.11.4e-7254.10 CSL zinc finger domain-containing protein[more]
AT3G44150.12.0e-7153.31 unknown protein[more]
AT3G11800.11.3e-7053.13 unknown protein[more]
BLAST of CmaCh20G008850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118650|ref|XP_008459230.1|6.1e-11080.43PREDICTED: uncharacterized protein LOC103498418 [Cucumis melo][more]
gi|778669190|ref|XP_011649210.1|3.7e-10779.57PREDICTED: uncharacterized protein LOC101222204 [Cucumis sativus][more]
gi|700206629|gb|KGN61748.1|1.7e-9673.62hypothetical protein Csa_2G237180 [Cucumis sativus][more]
gi|661899130|emb|CDO97124.1|1.1e-8262.72unnamed protein product [Coffea canephora][more]
gi|223541809|gb|EEF43357.1|1.9e-8264.29conserved hypothetical protein [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G008850.1CmaCh20G008850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21454FAMILY NOT NAMEDcoord: 12..243
score: 2.3E
NoneNo IPR availablePANTHERPTHR21454:SF9SUBFAMILY NOT NAMEDcoord: 12..243
score: 2.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh20G008850Cucsa.110010Cucumber (Gy14) v1cgycmaB0253
CmaCh20G008850Cla010277Watermelon (97103) v1cmawmB509
CmaCh20G008850Csa2G237180Cucumber (Chinese Long) v2cmacuB542
CmaCh20G008850MELO3C021927Melon (DHL92) v3.5.1cmameB495
CmaCh20G008850ClCG09G017660Watermelon (Charleston Gray)cmawcgB474
CmaCh20G008850CSPI02G11770Wild cucumber (PI 183967)cmacpiB547
CmaCh20G008850CmoCh02G004330Cucurbita moschata (Rifu)cmacmoB554
CmaCh20G008850CmoCh20G008920Cucurbita moschata (Rifu)cmacmoB551
CmaCh20G008850Lsi10G003210Bottle gourd (USVL1VR-Ls)cmalsiB507
CmaCh20G008850Cp4.1LG16g02100Cucurbita pepo (Zucchini)cmacpeB565
CmaCh20G008850Cp4.1LG05g12320Cucurbita pepo (Zucchini)cmacpeB585
CmaCh20G008850MELO3C021927.2Melon (DHL92) v3.6.1cmamedB575
CmaCh20G008850CsaV3_2G014260Cucumber (Chinese Long) v3cmacucB0651
CmaCh20G008850Cla97C09G179060Watermelon (97103) v2cmawmbB598
CmaCh20G008850CsGy2G011800Cucumber (Gy14) v2cgybcmaB218
CmaCh20G008850Carg22971Silver-seed gourdcarcmaB1232
CmaCh20G008850Carg23621Silver-seed gourdcarcmaB1104
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh20G008850CmaCh02G004310Cucurbita maxima (Rimu)cmacmaB469
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh20G008850Wax gourdcmawgoB0684
CmaCh20G008850Cucurbita maxima (Rimu)cmacmaB446
CmaCh20G008850Cucurbita moschata (Rifu)cmacmoB548
CmaCh20G008850Cucumber (Chinese Long) v2cmacuB546
CmaCh20G008850Watermelon (Charleston Gray)cmawcgB485
CmaCh20G008850Cucurbita pepo (Zucchini)cmacpeB561