Cp4.1LG05g06600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g06600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLow-temperature-induced 65 kDa-like protein
LocationCp4.1LG05 : 3980500 .. 3986556 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGTAAACAGCCGTTTTCCCTAAATCTTCGCTTATTTGTAGAGATATAATGTTAGGAATGTGTAACTTTGTAGGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAAATCAGTGCTGAAGAAAGTTAAGGCAAAGGCTAAGAAGATTAAGGACACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGAAGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATGTATGTCTTTCTCTTCCTGAAACATATAGCTCAAATTATAAGGATATTTGATGGTGCCACTTCTATTACTTGGCAGTGTATGAAGGCGCTGCAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACGGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACGGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCCTTGTCCCCATGGAGGTTGGAGGAGGGTCCTCAGGCGCCTAAAGACAAAGCTCCATACCCTCACACTCCTCATAATTCCGAGGTCAAAGCTTTGGATCCAACAAAAAGAGGTAACATTATCCACTTTGAGCATAATCTTACATTTTCTTTGGGCTTATTCAAGAAGCCTCGTACCAATGGAGATTTAGGCATTTATGTTGAGTTATGGAGTCTGCTCCCTGTATTTATAGCTTGGTCAATGGCTATATCCGGTAAAGCTATATATGGTACATAGCTATATATAGTAGATGGTTAAATCTGGTAAAGCTATATTTAGTAGACTGAACCATATATATATCCCGTCCAGTAAAGCTCTTAAATGTACTTTTCTATTCTCTGTACTCTCTTGTTGTACATGCCTGAAGTCATCAATAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCAACTTCTCTCTATCCTTCTCTTTGTGTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCCTAACAACTGGTATCGATCCTAACAACTGGTATCAGAGCAAGGCAAAATTCACCACGATCTGTGAAGATGGAAAGTTCAAAGATTGGAATTGAGAAGTTCGATGGATCCGATTTCGGTTTCTGGAAGATGCAGATTGAAGATTATCTGTACCAGAAAGATCTTCACGAACCTCTGTTGGGGGTGAAGCCGGATACCATGACCACGGAACAGTGGAAGCTCAAGGATCGACAAGCCTTAGGGATGATCCGGTTGACGCTATCCAGAAACGTGGCGTTTAACATCATCAAGGAGAAGACAACGTCAGATCTGATGAAGGCGCTGTCAAATATGTATGAAAAACCGTCGGCTATGAACAAGGTGTATTTGATGCGTAGATTGTTCAATCTACAGATGTCTGAAGGTGGACGTGTTGCGGATCATATAAATGAATTCAATATGATCATAAGTCAACTGGGTTCGGTGGAAATTAATTTCGAAGATGAAATTAAAGCGTTGATTTTGATGTCATCCTTACCCGAGTCATGGGATACTGTTGTTGCCGCAATCAGCAGTTCCCGAGGATCTGATAAACTGAAGTTTGATGAAATTCGAGATGTAGTTCTCAGCGAAAGTATTCGCAAACGGGAAACTGGAGATTCATCAGGCAATGCTCTCAGTGTTGATCGAAGGGGAAGAAGCAAATCAAAGAGCTCAAACAAACATGGGCGTTCAAAATCAAAGAACCGGGGAAAATCTCCAAACAAACCCAACGTAACGTGTTGGAGCTGTGGGGGAAAAGGACACTTTCGGACAGATTGTACAAAGCTAAAGAAGAAGCAGAATCATAAATCTGAAGATGATGATGATTCTATATACACAACAGAAGATGCTGAGGACGTTTTAATCCTTAGTGTGGATAGCCCAGCTGAATCCTGGATTTTGGATTCAGGTGCATCGTTCCATTCGTCTCCAAGTAAGGAATTGTTTCGAAATTTCAAATCAGGAAATTTCGGGAAGGTGTATCTTGCCGACAATAAAACCTTGGAGATTGAAGGAAAGGGAGATGTCTCCATACAAACTCCAGCAGGAAATCAATGGACATTACAAGATGTCAGATACATTCCTGGTCTCAAGAAGAACCTGATCTCTATTGGTCAGTTGGATAGCACAGGCTATGCAGCAGAGTTTGGAAAGAGTTCCTGGAAGATTGTGAAGGGCGCCATGGTTGTTGCGCGTGGCACAAAATCTGGAACCTTATACACTACTGCAGAGTGTATAAACATGACTGCTGCTGCTGAGAGTGCTTCCAATTCAAGTCTATGGCACAATAGACTTGGACATATGAGCGTCAAAGGAATGAAGATGCTCACTGCGAAAGGAGCTTTAGAAGGCTTAAAATCTGTTGATATGGGTCTTTGTGAGAGCTGCGTTATGGGCAAACAGAAACGAGTTAGTTTCACAAAGGCTGCCAGAGAACCGAAGAAAGTGCGGTTGGAAATGGTCCATACAGACGTCTGGGGACCATCTCCAGTTTCATCACTTGGTGGATCAAGGTACTACGTCACCTTCATCGATGACTTCAGCAGGAAGGTATGGGTTTACTTTCTGAAACATAAGTCAGATGTGTTTACCACCTTCAAGAAGTGGAAAGCTGAAGTTGAAAATCAGACCGGCTTGAAGATCAAATGCCTGAGGTCTGACAATGGAGGAGAGTACAACAAATCAGAGTTTATAACATTTTGTGCAGCTGAGGGAATTAGATTAATAAGAACAATTCCCGGTAAGGCAAGACAAAATGGTATTGCAGAAAGGATGAACAGAACCTTGAATGAGCGAGCAAGAAGCATGAGGATTCATTCTGGATTGCCAAAGGCATTCTGGGCTGATGCTGTGAACACAGCAGCATATTTGATTAATAGAGGGCCGTCAGTACCCTTGAAGTTCAAATTGCCCGAAGAAGTATGGACAGGAAAAGAACTCAAGTACTCTCACTTGAGAACCTTTGGCTGTACTGCATATGTTCATGTTGATCCAGAGAAGAGAGATAAGCTTGATGCTAAGGCTGTGAAATGCTACTTCATAGGCTATGGCTCTGACATGTTCGGGTATAGGTTTTGGGATGAGAAAAATATGAAGATCCTAAGACACTGTGATGTGACCTTTGATGAAAATGTCATGTACAAGGACAGAGAGAAGATAAACTCTGAGACTACGAAGCAAGTGGGAGTTGAATTTGAGTGGCAAGAAAATTCACACAGTGATGGTACAACAGAAGCTCAAGAAACTCCTGATCCTATTGCTGAAGAACCAGACGTGGCTGATCCTATTGCTGAAGAACCAGACGTGGAGCAAGTTGCACCTGAACAGGTGTTGAGAAGATCATCCAGAACTACCAGAGCACCAGACAGATATTCAACCTCATTACACTATCTGTTGCTGACTGACGAAGGAGAACCAGAGTCCTTTGATGAGGCCCTACAAGTGGAAGATTCAACTAAGTGGGAGCAAGCCATGGATGATGAGATGAGCTCACTTGAAAGGAATAATACGTGGGTGCTGACTGAGTTGCCTACAGGAAAGAGAGCTCTGTTGAACAAATGGGTGTTCAAAATCAAGGTTGAACCAGATGGCAGAAGGAGGTTTAAGGCTCGGTTAGTAGTTAAAGGATATTCACAAAGAAAAGGCATTGATTATGCTGAGATCTTTTCTCCAGTTGTGAAATTAACTACTATCCGAATTCTACTGAGTATTGTTGCATCGGAGAATTTGCACCTTGAGCAAATGGATGTAAAAACGGCATTTTTACATGGAGATCTAGACGAGGAGATCTATATGCAACAACCCGAAGGATTTGCAGCTCCAAGCAAGGAGCACATGGTGTGTAAGCTCAATAAGAGCTTGTATGGACTGAAACAAGCACCGAGACAATGGTACAAGAAGTTTGACTCCTTCATGAGCAAGAGTGGTTTCCACAGAAGTGAAAAGGATCAGTGTTGCTACCTCAAGAAATACACTGATTCTTATGTGTTTCTACTCCTGTATGTGGATGATATACTAATTGCTGGATCAAGTATGAGGGAGATAAACCACCTGAAGGCAAGCTTGTCTTCAGTATTTGAGATGAAAGATTTAGGTGCAGCGAAGCAGATCCTTGGGATGAGGATTTCTCGAGATAGATCTGCTGGCACATTAAATCTATCCCAAGAGCAGTACATTGAGAAGGTGTTGTCCAAATTCAAGATGAATAACGCTAAACCCAGGACTACCCCCTTGGCAAATCATATTAAATTGTCAAAGGGGCAATCTCCCAAGACAGTTGAGGAACGTGAGCACATGGCATCAGTTCCGTACGCTTCTGCAGTTGGGAGTTTGATGTATGCTATGGTCTGCACTAGACCTGACATAACACATGCAGTGGGAGTTGTTAGCAAGTACATGGCAAATCCAGGGAAGGAACATTGGGAAGCTGTGAAGTGGCTTCTAAGATATCTGAGAGGTACATCCAATACTACACTTTGTTATGGCAATGGCAAAGTAGTTCTGCAAGGTTTTGTGGATGCTGATCTGAGTGGAGATGTAGACTCCAGCAAGAGCACATCTGGGTATATCTACACTATAGATGGAACAGCAGTGAGTTGGATGTCTAAGCTTCAGAAATGCGTTGCTCTTTCATCTACTGAAGCTGAGTACGTGGCCATAGCTGAAGCTGGAAAGGAGATGATATGGATGACAGACTATCTAGAAGAATTAGGCCGGAAGCAGTGCAAGAAGATCCTTTATACAGATAGTCAGAGTGCCATACAGTTGGTGAAAAACCCAGTCTATCATTCAAGAACAAAACACATTAGAAGACGGTACCATTTCACTCGCAGGTTAGTGGAAGAAGGCGATATGTGTTTGGAGAAGATAGAGGGTGCAAAGAATCCAGCAGACATGTTGACAAAATGTGTTGATGTTGGAAAATTAAAGCTATGCAAAGCCCTAATTGGTATGGTGTAGGATCAGTCTCCAAGTGGGAGAATTGTTGAGTTATGGAGTCTGCTCCCTGTATTTATAGCTTGGTCAATGGCTATATCCGGTAAAGCTATATATGGTACATAGCTATATATAGTAGATGGTTAAATCTGGTAAAGCTATATTTAGTAGACTGAACCATATATATATCCCGTCCAGTAAAGCTCTTAAATGTACTTTTCTATTCTCTGTACTCTCTTGTTGTACATGCCTGAAGTCATCAATAAAAAATCCTTTTAGCCAGAGTTCTCCTTGCAACTTCTCTCTATCCTTCTCTTTGTGTTCATCTAGATCGAGCGTGTGCGTTGTTGTGCGATCCTAACAACTGGTATCGATCCTAACAATTTATTCCTAATGGATAACAAATCGATAATCATCCTCCCAACAATCTTCACATCTACAATAGCAGTTTCTTTCTTGCCGTTTGATCTTTATGAATGTGTTGCGGTGGAACAGGGAACGAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACAACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGGATAGACGAAGGAAATCAGAGAAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCATCCATGCGGAGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGAAAGGTAACAGAGTCCGAGGAGTTGACTCAGCGACTCGGGAGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTAAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCGTGGATGGGGAAAGGTGGAGATCCTAATACTTCATAA

mRNA sequence

ATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAAATCAGTGCTGAAGAAAGTTAAGGCAAAGGCTAAGAAGATTAAGGACACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGAAGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATTGTATGAAGGCGCTGCAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACGGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACGGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCCTTGTCCCCATGGAGGTTGGAGGAGGGGAACGAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACAACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGGATAGACGAAGGAAATCAGAGAAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCATCCATGCGGAGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGAAAGGTAACAGAGTCCGAGGAGTTGACTCAGCGACTCGGGAGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTAAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCGTGGATGGGGAAAGGTGGAGATCCTAATACTTCATAA

Coding sequence (CDS)

ATGGAGTCCCAGCAAACGGCGCCTCATCGCCACCACGCCCACCACCATGACCCTCACAACGTCGCACTTCACCGAAGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGAAATCAGTGCTGAAGAAAGTTAAGGCAAAGGCTAAGAAGATTAAGGACACGATCACTAAGCATGGACATGGCCACGATCACCATGAGCCCGAGGATCACGAAGAAGAAGAAGGTGGAGGAGCTGTGGTGGATCCTGAACTTCAAGGGGCACCATTGTATGAAGGCGCTGCAATGAGGAGCGCTATGGCCGGAAAAGGGCAGCAACAAGATGTCGGAATTGGATTGCCGACGGAGGTGCACGATCAGCCTCCTCCGGCTCCAAGAGAAACGGCAAGCCGTCCCTCTGCTGTTGAGCCAAACACGACCATGTCCTTGTCCCCATGGAGGTTGGAGGAGGGGAACGAAGAAACAGGGGATTCTCAGACATTCGATTCATTTGCAAGAATGAAGCTCAACAACGAAGACGTACAGACCCGTCCCGGCTTAGCTAGTGGGATAGACGAAGGAAATCAGAGAAGCTCCGGGGAAAAGATCTCAGGCGTGGGTTCATCCATGCGGAGTAAAGCAGAGGAAAACACAGACACCAACTCTTCTTCGCCATTGGAGTATGGAAGGAAGATAGCTTTAGCAGTGACAGAGAAGCTGAAGCCAGGGGAGGAAGACAAAGCACTTTCAGAGGTGATATCGGAGGCTTACAACACAAGTAAAGAGAAGGTAGTGAAAGCTGGAGAAAATCAGCCCAAAGGAAAGGTAACAGAGTCCGAGGAGTTGACTCAGCGACTCGGGAGAGAGGATAATAATGAAGGAACACAGAGATACTCCCCAGCAACCTCCACCACTGCAGCGACGGTAAAGAATATGGCGGATATGGTGAGGGACAGTGTGGGGTCGTGGATGGGGAAAGGTGGAGATCCTAATACTTCATAA

Protein sequence

MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHGHGHDHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVHDQPPPAPRETASRPSAVEPNTTMSLSPWRLEEGNEETGDSQTFDSFARMKLNNEDVQTRPGLASGIDEGNQRSSGEKISGVGSSMRSKAEENTDTNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGENQPKGKVTESEELTQRLGREDNNEGTQRYSPATSTTAATVKNMADMVRDSVGSWMGKGGDPNTS
Homology
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BLAST of Cp4.1LG05g06600 vs. Swiss-Prot
Match: LTI65_ARATH (Low-temperature-induced 65 kDa protein OS=Arabidopsis thaliana GN=LTI65 PE=2 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 6.2e-09
Identity = 91/310 (29.35%), Postives = 137/310 (44.19%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEK--KSVLKKVKAKAKKIKDTITK 60
           MESQ T P+    H      + +H      E+ +HHEK    VLKKVK KAKKIK+++TK
Sbjct: 1   MESQLTRPY---GHEQAEEPIRIHHP----EEEEHHEKGASKVLKKVKEKAKKIKNSLTK 60

Query: 61  HGHGHDHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVH 120
           HG+GHDH   +D +E +      DPE+ GAP+YE +A+R  + GK   + +     T V 
Sbjct: 61  HGNGHDHDVEDDDDEYD----EQDPEVHGAPVYESSAVRGGVTGK--PKSLSHAGETNVP 120

Query: 121 DQPPPAPRETASRPSAVEPNTTMSLSPWRLEE---GNEETGDSQTFDSFARMKLNNEDVQ 180
                 P  T   P  V  + T  + P  L++   G+E   D       +  +   E   
Sbjct: 121 ASEEIVPPGTKVFP-VVSSDHTKPIEPVSLQDTSYGHEALADPVRTTETSDWEAKREAPT 180

Query: 181 TRP-GLASGIDEGNQRSSGEKISGVGSSMRSKAEENTDT----NSSSPLEYGRKIALAVT 240
             P G++   D G  R + ++      S+ S  E+ T T         L   RK+ +   
Sbjct: 181 HYPLGVSEFSDRGESREAHQEPLNTPVSLLSATEDVTRTFAPGGEDDYLGGQRKVNVETP 240

Query: 241 EKLKPGEEDKAL---------------SEVISEAYNTSKEKVVKAGENQPKGKVT-ESEE 285
           ++L   EED A                S+V    +   +  V +  E+  + KVT ES +
Sbjct: 241 KRL---EEDPAAPGGGSDYLSGVSNYQSKVTDPTHKGGEAGVPEIAESLGRMKVTDESPD 293

[Close]
BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match: A0A0A0LIE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914030 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.9e-44
Identity = 141/303 (46.53%), Postives = 180/303 (59.41%), Query Frame = 1 

Query: 96  MRSAMAGKGQQQDVGIGLPTE--VHDQPPPAPRETASRPSAVE----------------- 155
           MRSA+AGKGQ QDVGIG  T   +H++PPPA RE  SRPSAV+                 
Sbjct: 1   MRSAVAGKGQHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDD 60

Query: 156 ----PNTTMSLSPWRLE------------------------EGNEET-GDSQTFDSFARM 215
               PNTTMSLSPW+LE                         G+EE  G SQ FDSFARM
Sbjct: 61  SNVAPNTTMSLSPWKLEDDPHAPKDPHAPHISEVKVHDPSNRGSEEAAGRSQVFDSFARM 120

Query: 216 KLNNEDVQTRPGLASGI--DEG--NQRSSGEKISGVGSSMRSKA---------------- 275
           K+++++   R G   G+  ++G  +Q +  +KIS VGS++  KA                
Sbjct: 121 KVDDKE-PNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 180

Query: 276 EENTDTN---SSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN- 323
            E T TN   SSSPLEYG+KIAL VTEKLKPGEED+ALSEVISEA+   K++VVK GE+ 
Sbjct: 181 TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 240

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BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match: B9I491_POPTR (Stress-responsive family protein OS=Populus trichocarpa GN=POPTR_0012s13180g PE=4 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 6.1e-19
Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHG 60
           MESQ   PH  H + HDP+NV LH  VEGE DG  HEKKSVLKKV  KAKK+KD +  HG
Sbjct: 1   MESQMARPHGVHDYEHDPNNVGLHPVVEGE-DGYQHEKKSVLKKVMDKAKKLKDKVKLHG 60

Query: 61  HGHDHHE---PEDH-----EEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIG 120
           HGHD+HE   P+DH     +++E    V DPE+ GA  Y+ AA+R+++ G+G    +G+G
Sbjct: 61  HGHDYHEGHVPDDHDLYEEDDDEDEEMVEDPEVHGASAYDSAAIRNSVQGQG----LGLG 120

Query: 121 LPTEVHDQPPPAPRE 128
            P   +  P    +E
Sbjct: 121 NPRTSYGNPTTMQKE 130

[Close]
BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match: A0A059DJY8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02790 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 4.3e-17
Identity = 69/137 (50.36%), Postives = 82/137 (59.85%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHG 60
           MESQ   PH H  +  DP+ V LH + EG ++  HHEKKSVLKKVKAKAKK+KDTITKHG
Sbjct: 1   MESQVAHPHGH-GYGQDPNAVGLHSAGEGGDNEHHHEKKSVLKKVKAKAKKLKDTITKHG 60

Query: 61  HGHDH-----HEPEDH----EEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGI 120
           HG DH     H P+DH    E++E      DPE+ GAP+YE  A+ S +       D G 
Sbjct: 61  HGDDHDHPEGHVPDDHDLDEEDDEDEEVDEDPEIHGAPIYESVAIVSGV-------DTGR 120

Query: 121 GLPT-EVHDQPPPAPRE 128
            L T E H  P  A RE
Sbjct: 121 SLFTGEDHGTPSDAGRE 129

[Close]
BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match: A0A161WYT1_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018199 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 60/113 (53.10%), Postives = 76/113 (67.26%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNV-----ALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDT 60
           MESQ     R H HH++P ++     AL   VEG  +  HHEK SVLKKVKAKAKKIK+T
Sbjct: 1   MESQLP---RTHGHHYEPTDLSTNPPALQSGVEGHSEA-HHEKPSVLKKVKAKAKKIKNT 60

Query: 61  ITKHGHGHDH---HEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQ 106
           +TKHGH H+H   H+ +++EE+E    V DPE+ GAP+YE AA+RSA    GQ
Sbjct: 61  LTKHGHEHEHDHDHDHDEYEEDEDDEMVKDPEIHGAPIYESAAVRSATLSSGQ 109

[Close]
BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match: K7MID0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.1e-15
Identity = 60/115 (52.17%), Postives = 69/115 (60.00%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQH-HEKKSVLKKVKAKAKKIKDTITKH 60
           M+S+    H H  HHH+ HNV  H    GEE   H HEKKSVLKKVK KAKKIKDTITKH
Sbjct: 1   MDSRAVQTHSHE-HHHNSHNVGSHAVAHGEEQHHHDHEKKSVLKKVKQKAKKIKDTITKH 60

Query: 61  G-------HGH-----DHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAG 103
           G       HGH     D H P+DH+ EE       PE+ GAP+Y+ AA+R A  G
Sbjct: 61  GHHDHEHEHGHEYHLDDQHIPDDHDLEEEDEMDEYPEVHGAPIYDSAAVRGAAPG 114

[Close]
BLAST of Cp4.1LG05g06600 vs. TAIR10
Match: AT5G52300.1 (AT5G52300.1 CAP160 protein)

HSP 1 Score: 63.2 bits (152), Expect = 3.5e-10
Identity = 91/310 (29.35%), Postives = 137/310 (44.19%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEK--KSVLKKVKAKAKKIKDTITK 60
           MESQ T P+    H      + +H      E+ +HHEK    VLKKVK KAKKIK+++TK
Sbjct: 1   MESQLTRPY---GHEQAEEPIRIHHP----EEEEHHEKGASKVLKKVKEKAKKIKNSLTK 60

Query: 61  HGHGHDHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTEVH 120
           HG+GHDH   +D +E +      DPE+ GAP+YE +A+R  + GK   + +     T V 
Sbjct: 61  HGNGHDHDVEDDDDEYD----EQDPEVHGAPVYESSAVRGGVTGK--PKSLSHAGETNVP 120

Query: 121 DQPPPAPRETASRPSAVEPNTTMSLSPWRLEE---GNEETGDSQTFDSFARMKLNNEDVQ 180
                 P  T   P  V  + T  + P  L++   G+E   D       +  +   E   
Sbjct: 121 ASEEIVPPGTKVFP-VVSSDHTKPIEPVSLQDTSYGHEALADPVRTTETSDWEAKREAPT 180

Query: 181 TRP-GLASGIDEGNQRSSGEKISGVGSSMRSKAEENTDT----NSSSPLEYGRKIALAVT 240
             P G++   D G  R + ++      S+ S  E+ T T         L   RK+ +   
Sbjct: 181 HYPLGVSEFSDRGESREAHQEPLNTPVSLLSATEDVTRTFAPGGEDDYLGGQRKVNVETP 240

Query: 241 EKLKPGEEDKAL---------------SEVISEAYNTSKEKVVKAGENQPKGKVT-ESEE 285
           ++L   EED A                S+V    +   +  V +  E+  + KVT ES +
Sbjct: 241 KRL---EEDPAAPGGGSDYLSGVSNYQSKVTDPTHKGGEAGVPEIAESLGRMKVTDESPD 293

[Close]
BLAST of Cp4.1LG05g06600 vs. TAIR10
Match: AT4G25580.1 (AT4G25580.1 CAP160 protein)

HSP 1 Score: 53.9 bits (128), Expect = 2.1e-07
Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 1 

Query: 5  QTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEK--KSVLKKVKAKAKKIKDTITKHGHG 64
          Q    R H HH     + +H     EE+G HHEK    VLKKVK KAKKIK+ +TKHGHG
Sbjct: 4  QAQLQRTHGHHQAQEPIRIHHP---EEEG-HHEKGPSKVLKKVKEKAKKIKNVLTKHGHG 63

Query: 65 HDH----HEPEDH--EEEEGGGAVVDPELQGAPLYEGAA 96
          H+H    H P+DH  ++E+      D +L G     G A
Sbjct: 64 HEHDRGEHIPDDHDLDQEDDEDDYNDNQLHGGAPARGKA 98

[Close]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match: gi|778689071|ref|XP_011652891.1| (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus])

HSP 1 Score: 295.8 bits (756), Expect = 9.1e-77
Identity = 206/400 (51.50%), Postives = 253/400 (63.25%), Query Frame = 1 

Query: 5   QTAPHRHHAHHHDPHNVALHRS-VEGEE-----DGQHHEKKSVLKKVKAKAKKIKDTITK 64
           Q  PH HH HHH    + LH+S VEG+E     D +HHEKKSVLKKVKAKAKKIKDTITK
Sbjct: 4   QIPPHHHHHHHHP---LGLHQSHVEGKEELQEGDQEHHEKKSVLKKVKAKAKKIKDTITK 63

Query: 65  HGHGHDHHEPEDHEEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIGLPTE-- 124
           HGHGHDHH+ ED  ++E    V DPE+QGAPLYEGAAMRSA+AGKGQ QDVGIG  T   
Sbjct: 64  HGHGHDHHDEEDVSDDEEDEVVEDPEIQGAPLYEGAAMRSAVAGKGQHQDVGIGTGTTRM 123

Query: 125 VHDQPPPAPRETASRPSAVE---------------------PNTTMSLSPWRLE------ 184
           +H++PPPA RE  SRPSAV+                     PNTTMSLSPW+LE      
Sbjct: 124 MHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDDSNVAPNTTMSLSPWKLEDDPHAP 183

Query: 185 ------------------EGNEET-GDSQTFDSFARMKLNNEDVQTRPGLASGI--DEG- 244
                              G+EE  G SQ FDSFARMK+++++   R G   G+  ++G 
Sbjct: 184 KDPHAPHISEVKVHDPSNRGSEEAAGRSQVFDSFARMKVDDKE-PNRTGSPRGLVQEQGG 243

Query: 245 -NQRSSGEKISGVGSSMRSKA----------------EENTDTN---SSSPLEYGRKIAL 304
            +Q +  +KIS VGS++  KA                 E T TN   SSSPLEYG+KIAL
Sbjct: 244 EDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNKSSSSSPLEYGKKIAL 303

Query: 305 AVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN-----QPKGKVTESEELTQRLGRE 323
            VTEKLKPGEED+ALSEVISEA+   K++VVK GE+       KG+VTESEELT+RLG+E
Sbjct: 304 TVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESAFGRPPSKGEVTESEELTRRLGKE 363

[Close]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match: gi|700205339|gb|KGN60472.1| (hypothetical protein Csa_3G914030 [Cucumis sativus])

HSP 1 Score: 188.0 bits (476), Expect = 2.7e-44
Identity = 141/303 (46.53%), Postives = 180/303 (59.41%), Query Frame = 1 

Query: 96  MRSAMAGKGQQQDVGIGLPTE--VHDQPPPAPRETASRPSAVE----------------- 155
           MRSA+AGKGQ QDVGIG  T   +H++PPPA RE  SRPSAV+                 
Sbjct: 1   MRSAVAGKGQHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDD 60

Query: 156 ----PNTTMSLSPWRLE------------------------EGNEET-GDSQTFDSFARM 215
               PNTTMSLSPW+LE                         G+EE  G SQ FDSFARM
Sbjct: 61  SNVAPNTTMSLSPWKLEDDPHAPKDPHAPHISEVKVHDPSNRGSEEAAGRSQVFDSFARM 120

Query: 216 KLNNEDVQTRPGLASGI--DEG--NQRSSGEKISGVGSSMRSKA---------------- 275
           K+++++   R G   G+  ++G  +Q +  +KIS VGS++  KA                
Sbjct: 121 KVDDKE-PNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGET 180

Query: 276 EENTDTN---SSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN- 323
            E T TN   SSSPLEYG+KIAL VTEKLKPGEED+ALSEVISEA+   K++VVK GE+ 
Sbjct: 181 TEETTTNKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESA 240

[Close]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match: gi|659131819|ref|XP_008465872.1| (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo])

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-42
Identity = 140/304 (46.05%), Postives = 174/304 (57.24%), Query Frame = 1 

Query: 96  MRSAMAGKGQQQDVGIGLPTE--VHDQ-PPPAPRETASRPSAVE---------------- 155
           MRSA AGKGQ QDVGIG+ T   +H+  PPPA RE  SRPSAV+                
Sbjct: 1   MRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVD 60

Query: 156 -----PNTTMSLSPWRLEE------------------------GNEET-GDSQTFDSFAR 215
                PNTTMSLSPW+LEE                        G+EE  G SQ FDSFA+
Sbjct: 61  DSNVAPNTTMSLSPWKLEEDPHGPKDPRAPHISEVKVHDPSNRGSEEAAGKSQVFDSFAK 120

Query: 216 MKLNNEDVQTRPGLASGIDEGNQRSS----GEKISGVGSSMRSKAEENTD---------- 275
           MK++++    R G   G+D+ +         +KIS VGS++  KA    D          
Sbjct: 121 MKVDDKK-PNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGE 180

Query: 276 ---------TNSSSPLEYGRKIALAVTEKLKPGEEDKALSEVISEAYNTSKEKVVKAGEN 323
                    ++SSSPLEYG+KIAL VTEKLKPGEED+ALSEVISEA N  K++VVK GE+
Sbjct: 181 TKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGES 240

[Close]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match: gi|566198267|ref|XP_002318815.2| (stress-responsive family protein [Populus trichocarpa])

HSP 1 Score: 103.2 bits (256), Expect = 8.7e-19
Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHG 60
           MESQ   PH  H + HDP+NV LH  VEGE DG  HEKKSVLKKV  KAKK+KD +  HG
Sbjct: 1   MESQMARPHGVHDYEHDPNNVGLHPVVEGE-DGYQHEKKSVLKKVMDKAKKLKDKVKLHG 60

Query: 61  HGHDHHE---PEDH-----EEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGIG 120
           HGHD+HE   P+DH     +++E    V DPE+ GA  Y+ AA+R+++ G+G    +G+G
Sbjct: 61  HGHDYHEGHVPDDHDLYEEDDDEDEEMVEDPEVHGASAYDSAAIRNSVQGQG----LGLG 120

Query: 121 LPTEVHDQPPPAPRE 128
            P   +  P    +E
Sbjct: 121 NPRTSYGNPTTMQKE 130

[Close]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match: gi|743857173|ref|XP_011030111.1| (PREDICTED: low-temperature-induced 65 kDa protein-like [Populus euphratica])

HSP 1 Score: 98.2 bits (243), Expect = 2.8e-17
Identity = 62/136 (45.59%), Postives = 85/136 (62.50%), Query Frame = 1 

Query: 1   MESQQTAPHRHHAHHHDPHNVALHRSVEGEEDGQHHEKKSVLKKVKAKAKKIKDTITKHG 60
           MESQ   PH  H + HDP+NV LH  V+GE DG  HEKKSVLKKV  KAKK+KD +  HG
Sbjct: 1   MESQMARPHGVHDYEHDPNNVGLHPVVKGE-DGYQHEKKSVLKKVMDKAKKLKDKVKLHG 60

Query: 61  HGHDHHE----PEDH-----EEEEGGGAVVDPELQGAPLYEGAAMRSAMAGKGQQQDVGI 120
           HGHD+H+    P+DH     +++E    V DP++ GA  Y+ AA+RS++ G+G++    +
Sbjct: 61  HGHDYHDEGHVPDDHDLYEEDDDEDEEIVEDPQVHGASAYDSAAIRSSVQGQGRR----L 120

Query: 121 GLPTEVHDQPPPAPRE 128
           G P   +  P    +E
Sbjct: 121 GNPRTSYGNPTTMQKE 131

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g06600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LTI65_ARATH6.2e-0929.35Low-temperature-induced 65 kDa protein OS=Arabidopsis thaliana GN=LTI65 PE=2 SV=... [more]
BLAST of Cp4.1LG05g06600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIE7_CUCSA1.9e-4446.53Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914030 PE=4 SV=1[more]
B9I491_POPTR6.1e-1948.15Stress-responsive family protein OS=Populus trichocarpa GN=POPTR_0012s13180g PE=... [more]
A0A059DJY8_EUCGR4.3e-1750.36Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02790 PE=4 SV=1[more]
A0A161WYT1_DAUCA2.2e-1653.10Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018199 PE=4 SV=1[more]
K7MID0_SOYBN4.1e-1552.17Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1[more]
BLAST of Cp4.1LG05g06600 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52300.13.5e-1029.35 CAP160 protein[more]
AT4G25580.12.1e-0743.43 CAP160 protein[more]
BLAST of Cp4.1LG05g06600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778689071|ref|XP_011652891.1|9.1e-7751.50PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus][more]
gi|700205339|gb|KGN60472.1|2.7e-4446.53hypothetical protein Csa_3G914030 [Cucumis sativus][more]
gi|659131819|ref|XP_008465872.1|1.1e-4246.05PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo][more]
gi|566198267|ref|XP_002318815.2|8.7e-1948.15stress-responsive family protein [Populus trichocarpa][more]
gi|743857173|ref|XP_011030111.1|2.8e-1745.59PREDICTED: low-temperature-induced 65 kDa protein-like [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009737 response to abscisic acid
biological_process GO:0006950 response to stress
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g06600.1Cp4.1LG05g06600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33836FAMILY NOT NAMEDcoord: 1..101
score: 1.2
NoneNo IPR availablePANTHERPTHR33836:SF1ARM REPEAT SUPERFAMILY PROTEIN-RELATEDcoord: 1..101
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g06600Cucsa.313890Cucumber (Gy14) v1cgycpeB0827
Cp4.1LG05g06600CmaCh19G004090Cucurbita maxima (Rimu)cmacpeB548
Cp4.1LG05g06600CmaCh02G010650Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g06600CmoCh19G004180Cucurbita moschata (Rifu)cmocpeB503
Cp4.1LG05g06600CmoCh02G010830Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g06600ClCG09G012920Watermelon (Charleston Gray)cpewcgB627
Cp4.1LG05g06600MELO3C003321.2Melon (DHL92) v3.6.1cpemedB824
Cp4.1LG05g06600Bhi05G000440Wax gourdcpewgoB0931
Cp4.1LG05g06600Carg25091Silver-seed gourdcarcpeB0304
Cp4.1LG05g06600Carg08412Silver-seed gourdcarcpeB1002
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g06600Cp4.1LG15g03160Cucurbita pepo (Zucchini)cpecpeB278
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g06600Cucumber (Gy14) v2cgybcpeB429
Cp4.1LG05g06600Melon (DHL92) v3.6.1cpemedB835
Cp4.1LG05g06600Cucumber (Chinese Long) v3cpecucB0903
Cp4.1LG05g06600Wax gourdcpewgoB0925
Cp4.1LG05g06600Cucurbita pepo (Zucchini)cpecpeB057
Cp4.1LG05g06600Cucurbita pepo (Zucchini)cpecpeB245
Cp4.1LG05g06600Cucumber (Gy14) v1cgycpeB0244
Cp4.1LG05g06600Cucurbita maxima (Rimu)cmacpeB358
Cp4.1LG05g06600Cucurbita maxima (Rimu)cmacpeB453
Cp4.1LG05g06600Cucurbita moschata (Rifu)cmocpeB322
Cp4.1LG05g06600Cucurbita moschata (Rifu)cmocpeB414
Cp4.1LG05g06600Wild cucumber (PI 183967)cpecpiB725
Cp4.1LG05g06600Cucumber (Chinese Long) v2cpecuB721
Cp4.1LG05g06600Cucumber (Chinese Long) v2cpecuB725
Cp4.1LG05g06600Bottle gourd (USVL1VR-Ls)cpelsiB618
Cp4.1LG05g06600Watermelon (Charleston Gray)cpewcgB678
Cp4.1LG05g06600Watermelon (97103) v1cpewmB705
Cp4.1LG05g06600Melon (DHL92) v3.5.1cpemeB691
Cp4.1LG05g06600Melon (DHL92) v3.5.1cpemeB701