Carg25091 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25091
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	low-temperature-induced 65 kDa protein
Location	Cucurbita_argyrosperma_scaffold_072 : 312826 .. 313633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTCCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGGCAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGTAACTAATTTTACATTAAAAAAAAAAAAAAAAAAAAAACCCTTTTTTTAATCTGTCCGTTTTCATTTTGAACTAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

mRNA sequence

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTCCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGGCAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

Coding sequence (CDS)

ATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAGAGAAACGACAAGTCGTCCTGCTGCAGTTACCACACTCTTTACTCCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGTCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGGCAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGATTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTGAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTGAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGCCGAAAGGGAGTGCAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGTGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACTGCAGGAATCGGCGAATTGA

Protein sequence

MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEEDPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQESAN

Homology

[Close]

BLAST of Carg25091 vs. NCBI nr
Match: XP_022952678.1 (low-temperature-induced 78 kDa protein-like [Cucurbita moschata])

HSP 1 Score: 450.7 bits (1158), Expect = 3.2e-123
Identity = 241/243 (99.18%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFT VDNSADTSNTTMSLSPSKLEE
Sbjct: 79  MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTSVDNSADTSNTTMSLSPSKLEE 138

Query: 61  DPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK KTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 139 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 198

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 199 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 258

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 259 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 318

Query: 241 SAN 244
           SAN
Sbjct: 319 SAN 321

[Close]

BLAST of Carg25091 vs. NCBI nr
Match: XP_023554181.1 (low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441.4 bits (1134), Expect = 2.0e-120
Identity = 236/243 (97.12%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGPRETTS PAAVTTLFT VDNSAD SNTTMSLSPSKLEE
Sbjct: 77  MRGGVGGERQHEGVGIGMPPPGPRETTSHPAAVTTLFTSVDNSADASNTTMSLSPSKLEE 136

Query: 61  DPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK KTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKM+VNDEQNQSRDQVSYAQ
Sbjct: 137 DPHAPKNKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMEVNDEQNQSRDQVSYAQ 196

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG
Sbjct: 197 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 256

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREPPKGSATESGRSVVG+VKDTVGSWLGKAG QSAGQGRPGKDHGGTEAEVRILQE
Sbjct: 257 ESAFREPPKGSATESGRSVVGVVKDTVGSWLGKAGGQSAGQGRPGKDHGGTEAEVRILQE 316

Query: 241 SAN 244
           SAN
Sbjct: 317 SAN 319

[Close]

BLAST of Carg25091 vs. NCBI nr
Match: XP_022971843.1 (low-temperature-induced 65 kDa protein-like [Cucurbita maxima])

HSP 1 Score: 436.0 bits (1120), Expect = 8.2e-119
Identity = 234/243 (96.30%), Postives = 235/243 (96.71%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGMPPPGPRETTSRPAAVTTLFTPVDNSADTSNTTMSLSPSKLEE 60
           MRGGVGGERQHEGVGIGMPPPGP+ETTSRPAAVTTLFT VDNSADTSNTTM LSPSKLEE
Sbjct: 76  MRGGVGGERQHEGVGIGMPPPGPKETTSRPAAVTTLFTSVDNSADTSNTTMPLSPSKLEE 135

Query: 61  DPHAPKGKTHLHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSRDQVSYAQ 120
           DPHAPK KTHLHPRNSEVKVHDPASTGSEEAGESQIL SFAKMKVNDEQNQSRDQVSYAQ
Sbjct: 136 DPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVNDEQNQSRDQVSYAQ 195

Query: 121 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVG 180
           KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEA NRRKQEVVKVG
Sbjct: 196 KISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVG 255

Query: 181 ESAFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRILQE 240
           ESAFREP KGS TESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRI QE
Sbjct: 256 ESAFREPTKGSVTESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRIPQE 315

Query: 241 SAN 244
           SAN
Sbjct: 316 SAN 318

[Close]

BLAST of Carg25091 vs. NCBI nr
Match: XP_008465872.2 (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 6.0e-61
Identity = 181/348 (52.01%), Postives = 199/348 (57.18%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM----------PPPGPRETTSRPAAVTTLFTPVDN-------- 60
           MR    G+ QH+ VGIG+          PPP  RE  SRP+AV T FT V+N        
Sbjct: 94  MRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVD 153

Query: 61  -SADTSNTTMSLSPSKLEEDPHAPKGKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSF 120
            S    NTTMSLSP KLEEDPH PK      P  SEVKVHDP++ GSEE AG+SQ+ DSF
Sbjct: 154 DSNVAPNTTMSLSPWKLEEDPHGPKDPR--APHISEVKVHDPSNRGSEEAAGKSQVFDSF 213

Query: 121 AKMKVN-------------DEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS----- 180
           AKMKV+             D+++   D ++YAQKISAVGSAVSGKAVAAKDFVAS     
Sbjct: 214 AKMKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYG 273

Query: 181 ---------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGE 240
                                KIALTVTEKLKPGEEDRALSEVISEALNRRK EVVKVGE
Sbjct: 274 ETKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGE 333

Query: 241 SAFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGK 244
           SAF  PP KG  TES                           GRSVVGMVKDTVGSWLGK
Sbjct: 334 SAFGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGK 393

[Close]

BLAST of Carg25091 vs. NCBI nr
Match: XP_011652891.1 (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus])

HSP 1 Score: 233.8 bits (595), Expect = 6.2e-58
Identity = 176/347 (50.72%), Postives = 192/347 (55.33%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM---------PPPGPRETTSRPAAVTTLFT---------PVDN 60
           MR  V G+ QH+ VGIG          PPP  RE TSRP+AV T FT          VD+
Sbjct: 98  MRSAVAGKGQHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDD 157

Query: 61  SADTSNTTMSLSPSKLEEDPHAPKGKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSFA 120
           S    NTTMSLSP KLE+DPHAPK      P  SEVKVHDP++ GSEE AG SQ+ DSFA
Sbjct: 158 SNVAPNTTMSLSPWKLEDDPHAPKDPH--APHISEVKVHDPSNRGSEEAAGRSQVFDSFA 217

Query: 121 KMKVND-------------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS------ 180
           +MKV+D             ++    DQ +YAQKISAVGSAVSGKAVAAKDFVAS      
Sbjct: 218 RMKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGE 277

Query: 181 --------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGES 240
                               KIALTVTEKLKPGEEDRALSEVISEA  RRK EVVKVGES
Sbjct: 278 TTEXXXXXXXXXXXPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGES 337

Query: 241 AFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGKA 244
           AF  PP KG  TES                           GRSVVGMVKDTVGSWLG A
Sbjct: 338 AFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNA 397

[Close]

BLAST of Carg25091 vs. TAIR10
Match: AT5G52300.1 (CAP160 protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04
Identity = 35/99 (35.35%), Postives = 46/99 (46.46%), Query Frame = 0


Query: 132 KAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALN-----RRKQEVVKVGESAFRE 191
           K V AK++        ++EKLKPGEED+ALSE+I+E L+      +K    K  E    +
Sbjct: 482 KGVTAKNY--------ISEKLKPGEEDKALSEMIAEKLHFGGGGEKKTTATKEVEVTVEK 541

Query: 192 PPKGSATE-------------SGRSVVGMVKDTVGSWLG 213
            P     E              G  +VG VK  V SWLG
Sbjct: 542 IPSDQIAEGKGHGEAVAEEGKGGEGMVGKVKGAVTSWLG 572

[Close]

BLAST of Carg25091 vs. TrEMBL
Match: tr|A0A1S3CPX7|A0A1S3CPX7_CUCME (low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.0e-61
Identity = 181/348 (52.01%), Postives = 199/348 (57.18%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM----------PPPGPRETTSRPAAVTTLFTPVDN-------- 60
           MR    G+ QH+ VGIG+          PPP  RE  SRP+AV T FT V+N        
Sbjct: 94  MRSATAGKGQHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVD 153

Query: 61  -SADTSNTTMSLSPSKLEEDPHAPKGKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSF 120
            S    NTTMSLSP KLEEDPH PK      P  SEVKVHDP++ GSEE AG+SQ+ DSF
Sbjct: 154 DSNVAPNTTMSLSPWKLEEDPHGPKDPR--APHISEVKVHDPSNRGSEEAAGKSQVFDSF 213

Query: 121 AKMKVN-------------DEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS----- 180
           AKMKV+             D+++   D ++YAQKISAVGSAVSGKAVAAKDFVAS     
Sbjct: 214 AKMKVDDKKPNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYG 273

Query: 181 ---------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGE 240
                                KIALTVTEKLKPGEEDRALSEVISEALNRRK EVVKVGE
Sbjct: 274 ETKEGTTADKSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGE 333

Query: 241 SAFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGK 244
           SAF  PP KG  TES                           GRSVVGMVKDTVGSWLGK
Sbjct: 334 SAFGRPPSKGVVTESEELTRRLGEEDKEATEKSSVASAAAATGRSVVGMVKDTVGSWLGK 393

[Close]

BLAST of Carg25091 vs. TrEMBL
Match: tr|A0A0A0LIE7|A0A0A0LIE7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.1e-58
Identity = 176/347 (50.72%), Postives = 192/347 (55.33%), Query Frame = 0


Query: 1   MRGGVGGERQHEGVGIGM---------PPPGPRETTSRPAAVTTLFT---------PVDN 60
           MR  V G+ QH+ VGIG          PPP  RE TSRP+AV T FT          VD+
Sbjct: 1   MRSAVAGKGQHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDD 60

Query: 61  SADTSNTTMSLSPSKLEEDPHAPKGKTHLHPRNSEVKVHDPASTGSEE-AGESQILDSFA 120
           S    NTTMSLSP KLE+DPHAPK      P  SEVKVHDP++ GSEE AG SQ+ DSFA
Sbjct: 61  SNVAPNTTMSLSPWKLEDDPHAPKDPH--APHISEVKVHDPSNRGSEEAAGRSQVFDSFA 120

Query: 121 KMKVND-------------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVAS------ 180
           +MKV+D             ++    DQ +YAQKISAVGSAVSGKAVAAKDFVAS      
Sbjct: 121 RMKVDDKEPNRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGE 180

Query: 181 --------------------KIALTVTEKLKPGEEDRALSEVISEALNRRKQEVVKVGES 240
                               KIALTVTEKLKPGEEDRALSEVISEA  RRK EVVKVGES
Sbjct: 181 TTEXXXXXXXXXXXPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGES 240

Query: 241 AFREPP-KGSATES---------------------------GRSVVGMVKDTVGSWLGKA 244
           AF  PP KG  TES                           GRSVVGMVKDTVGSWLG A
Sbjct: 241 AFGRPPSKGEVTESEELTRRLGKEDKEATEKSSVARAAAATGRSVVGMVKDTVGSWLGNA 300

[Close]

BLAST of Carg25091 vs. TrEMBL
Match: tr|A0A218X3M2|A0A218X3M2_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr022945 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09
Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 128 AVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQ-----EVVKVGES 187
           +V  K V+ KD++A        EKLKPGEED+ALSEVIS AL++RK+      VV   + 
Sbjct: 531 SVQDKGVSVKDYLA--------EKLKPGEEDKALSEVISSALDKRKKTADKPAVVTESDE 590

Query: 188 AFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGT--------EAE 242
             R   +G  +  G+ VV  +K  VGSWLGK+GD +A Q   G +   T        + +
Sbjct: 591 VRRHLGEGQLSSPGKGVVDKLKGAVGSWLGKSGDPNAPQQSHGSESVATGTDAAREEQGD 649

[Close]

BLAST of Carg25091 vs. TrEMBL
Match: tr|A0A2I0J3A2|A0A2I0J3A2_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_028853 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.7e-09
Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 0


Query: 128 AVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRKQ-----EVVKVGES 187
           +V  K V+ KD++A        EKLKPGEED+ALSEVIS AL++RK+      VV   + 
Sbjct: 522 SVQDKGVSVKDYLA--------EKLKPGEEDKALSEVISSALDKRKKTADKPAVVTESDE 581

Query: 188 AFREPPKGSATESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGT--------EAE 242
             R   +G  +  G+ VV  +K  VGSWLGK+GD +A Q   G +   T        + +
Sbjct: 582 VRRHLGEGQLSSPGKGVVDKLKGAVGSWLGKSGDPNAPQQSHGSESVATGTDAAREEQGD 640

[Close]

BLAST of Carg25091 vs. TrEMBL
Match: tr|A0A1S4CK52|A0A1S4CK52_TOBAC (low-temperature-induced 65 kDa protein-like OS=Nicotiana tabacum OX=4097 GN=LOC107819933 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.5e-09
Identity = 59/189 (31.22%), Postives = 86/189 (45.50%), Query Frame = 0


Query: 55  PSKLEEDPHAPKGKTH-LHPRNSEVKVHDPASTGSEEAGESQILDSFAKMKVNDEQNQSR 114
           P+ L++DP+APK +       N + KV DP     EEAG + ++ SF KM VN+     +
Sbjct: 47  PTVLDDDPNAPKDRPEDKSSSNYQSKVTDPTGANREEAGTTPLVQSFEKMSVNEGIRAEK 106

Query: 115 DQVSYAQKISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEALNRRK 174
                            GK+ A  ++    +   + EK KPGEED+ALSEVI+  L++ K
Sbjct: 107 G-----------AGEEEGKSKATDNYKGVSMKKYLAEKFKPGEEDKALSEVIAGTLSKHK 166

Query: 175 QEV--------------VKVGESAFR-------EPPKGSATESGRSVVGMVKDTVGSWLG 222
            +               VKV E   +       E    +A  SG+S+VG +K    SW G
Sbjct: 167 DKTEGTDQEEEAKPTGKVKVSEEVTKQTAGPTDEHGIAAAEGSGKSIVGRIKGVASSWFG 224

The following BLAST results are available for this feature:

BLAST of Carg25091 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952678.1	3.2e-123	99.18	low-temperature-induced 78 kDa protein-like [Cucurbita moschata]	[more]
XP_023554181.1	2.0e-120	97.12	low-temperature-induced 65 kDa protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022971843.1	8.2e-119	96.30	low-temperature-induced 65 kDa protein-like [Cucurbita maxima]	[more]
XP_008465872.2	6.0e-61	52.01	PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo]	[more]
XP_011652891.1	6.2e-58	50.72	PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus]	[more]

BLAST of Carg25091 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52300.1	1.3e-04	35.35	CAP160 protein	[more]

BLAST of Carg25091 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg25091 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CPX7\|A0A1S3CPX7_CUCME	4.0e-61	52.01	low-temperature-induced 65 kDa protein OS=Cucumis melo OX=3656 GN=LOC103503460 P...	[more]
tr\|A0A0A0LIE7\|A0A0A0LIE7_CUCSA	4.1e-58	50.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914030 PE=4 SV=1	[more]
tr\|A0A218X3M2\|A0A218X3M2_PUNGR	2.7e-09	40.94	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr022945 PE=4 SV=1	[more]
tr\|A0A2I0J3A2\|A0A2I0J3A2_PUNGR	2.7e-09	40.94	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_028853 PE=4 SV=1	[more]
tr\|A0A1S4CK52\|A0A1S4CK52_TOBAC	3.5e-09	31.22	low-temperature-induced 65 kDa protein-like OS=Nicotiana tabacum OX=4097 GN=LOC1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009737	response to abscisic acid
GO:0006950	response to stress

Vocabulary: **INTERPRO**
Term	Definition
IPR037491	LTI78/LTI65

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25091-RA	Carg25091-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..243
None	No IPR available	PANTHER	PTHR33836:SF1	ARM REPEAT SUPERFAMILY PROTEIN-RELATED	coord: 148..227
None	No IPR available	PANTHER	PTHR33836:SF1	ARM REPEAT SUPERFAMILY PROTEIN-RELATED	coord: 29..112
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	FAMILY NOT NAMED	coord: 148..227
IPR037491	Low-temperature-induced 78kDa/65kDa	PANTHER	PTHR33836	FAMILY NOT NAMED	coord: 29..112

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25091	Cla002832	Watermelon (97103) v1	carwmB0204
Carg25091	Csa3G914030	Cucumber (Chinese Long) v2	carcuB0242
Carg25091	MELO3C003321	Melon (DHL92) v3.5.1	carmeB0220
Carg25091	ClCG09G012920	Watermelon (Charleston Gray)	carwcgB0210
Carg25091	Cucsa.313890	Cucumber (Gy14) v1	carcgyB0260
Carg25091	CmaCh02G010650	Cucurbita maxima (Rimu)	carcmaB0295
Carg25091	CmaCh19G004090	Cucurbita maxima (Rimu)	carcmaB0294
Carg25091	CmoCh19G004180	Cucurbita moschata (Rifu)	carcmoB0300
Carg25091	CmoCh02G010830	Cucurbita moschata (Rifu)	carcmoB0301
Carg25091	Lsi05G000090	Bottle gourd (USVL1VR-Ls)	carlsiB192
Carg25091	Cp4.1LG05g06600	Cucurbita pepo (Zucchini)	carcpeB0304
Carg25091	Cp4.1LG15g03160	Cucurbita pepo (Zucchini)	carcpeB0303
Carg25091	CsGy3G044900	Cucumber (Gy14) v2	carcgybB0231
Carg25091	MELO3C003321.2	Melon (DHL92) v3.6.1	carmedB0226
Carg25091	CsaV3_3G049950	Cucumber (Chinese Long) v3	carcucB0246
Carg25091	Cla97C09G175640	Watermelon (97103) v2	carwmbB0218
Carg25091	Bhi05G000440	Wax gourd	carwgoB0268

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg25091	Carg08412	Silver-seed gourd	carcarB252

The following block(s) are covering this gene:


Gene	Organism	Block
Carg25091	Cucumber (Gy14) v2	carcgybB0230
Carg25091	Cucumber (Gy14) v1	carcgyB0259
Carg25091	Wild cucumber (PI 183967)	carcpiB0247
Carg25091	Cucumber (Chinese Long) v2	carcuB0241
Carg25091	Cucumber (Chinese Long) v3	carcucB0245
Carg25091	Melon (DHL92) v3.5.1	carmeB0221
Carg25091	Melon (DHL92) v3.6.1	carmedB0227