CmaCh19G004090 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh19G004090
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Low-temperature-induced 65 kDa protein
Location	Cma_Chr19 : 4958365 .. 4960907 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCTTCCTTATTATAGTTACTATCTCTCATACTTATCTTGTCACATTCTTTCATTATGGACTCCCAAATCGCCCCTCAGCAACAACATCACCAAGGTATCATTCTTTTTCTTCTGTAGTTGGTTGTTTTTTGCGTAGAAAAACAGGAAAAATGACATTTTGGTAGGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGCAGTCAGTGTTGAAGAAAGTGAAGGCTAAGGCTAAGAAGATTAAGGACAATATTACAAAGCATGGCGGTCATGACCATCCTCATGACTACGACGATGATGAAGAAGAAGATGAGGTCCTTCAAGATTCTGGTATCTCTTTTCCCTTTTAGATGCTTAAAAAATAACTCAAATGGAATGATATGGTATGATATGGTATACGTTGAGCATAATCTCTCATGACTTTTATGTGAGTCTCATGGTTGGTATTTTCTACGATCTTCCACTAAATTAGTCGACTCTCCCTAACCCTCCTTCCCTCGAACAAACTTCTCTTGAACAAAGTATGCCATAGAGCTTCAACTTCTATGTAGCCCTTAAAAGTCTCTTTCTAATTGAGCCTCGACTCCTTTTTTTGGAGCCTATCTTCCACTAAATTAGCGACTCTCCCTAACCCTCCTTCCATCGAACAAACTTCTCTTGAACAAAGTATACCATAGAGCTTCTCCGGAAGAATATGTAGCCCTTAAAAGTCTCTCTCTAATTGAGGCTCGACTCCTTTTTCTGGAGCCTTCGAACAAAGTACACTCTTTGTTCAACATAGGAGTCATTTTTTACTACATCTTCAAGGCTAGCAATTTCTTTGTTCGACGTTTGAAGATTCTATTAACATGACTAAATTAAGAACATGACATCCAGGTTAGAAATTACAATCCTCCACAATAGTACGATATTGGTCTCGTCTCCAATGGAGAGAGTATTCTTATAAACTCATAATCTTCCACTAAATTAGCTAATATGAGCCTCCACAACGGTACGATATTGGTCTCGTACTAATGGAGAGTATTCCGGTAAGCCCATCATCTTCCACTAAATTAGCGAAGGTGAGACTTCACAATGGTACGATATTAGTCTCACATTAATGGAGAGAATATTCTTATAAATCCAACCACATACCAATACGGTATGTACCAATGGGGAGAATATTCCTATAAACCCATCATCTTCCTAAAATTATCTAATGTAGAATTCCTCCCAACCATCCTCAACCCAAATTACATTGAACTTTTATACGATGGGCAGTGTATGAAGGTGCCGCAATGAGGGGCGGTGTGGGTGGAGAAAGGCAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAAAGAAACGACAAGTCGCCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGCCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGTAACTAATTTTACATTAAAAAAAAAAAAAAAAAAACCCTTTTTTCAATCTCTGTCCGTTTTCATTTTGAACTAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGGTTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTTAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTCAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGACGAAAGGGAGTGTAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGAGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACCGCAGGAATCGGCAAATTGAAGTGGTTGCAGACACATTTCTGGTGTCGTTTTTGTTTTTGGTAATTCAGTTGCTTTTGCGACTATTACGAGGTTGCAGTTTGCTGTTGTTTGTTTGTTTTGTGTACAGTAACTTTTTCAGACATGGTGGATAATGAGTTAAGTTACTAATGCATACAATGAAGGATACAATCTTATATTATAAGAGAGAATGGTATATAATAGCGTGATAGTTTTTGAACTTTTTATCGTAGTTTCAACCGTCCATGCTTCTCGAAGGCTTGGCTTTAAACTTTTCATAGAGCTACAATAGGTGCACCAAGTTATAGGGTTTATAAATGTCACAGCTTATAAATGTGATGTCACATGTCACAGCGATGAGAAAAGTGAAAAAGTATTGTGTATGGGTTACAAAAATGTATGCAAGTAGGTATTCACAGTCATGTCTCGGAACTCTAAAGCCGGGATCAACTCTA

mRNA sequence

TTCCCTTCCTTATTATAGTTACTATCTCTCATACTTATCTTGTCACATTCTTTCATTATGGACTCCCAAATCGCCCCTCAGCAACAACATCACCAAGGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGCAGTCAGTGTTGAAGAAAGTGAAGGCTAAGGCTAAGAAGATTAAGGACAATATTACAAAGCATGGCGGTCATGACCATCCTCATGACTACGACGATGATGAAGAAGAAGATGAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAAAGAAACGACAAGTCGCCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGCCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGGTTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTTAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTCAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGACGAAAGGGAGTGTAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGAGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACCGCAGGAATCGGCAAATTGAAGTGGTTGCAGACACATTTCTGGTGTCGTTTTTGTTTTTGGTAATTCAGTTGCTTTTGCGACTATTACGAGGTTGCAGTTTGCTGTTGTTTGTTTGTTTTGTGTACAGTAACTTTTTCAGACATGGTGGATAATGAGTTAAGTTACTAATGCATACAATGAAGGATACAATCTTATATTATAAGAGAGAATGGTATATAATAGCGTGATAGTTTTTGAACTTTTTATCGTAGTTTCAACCGTCCATGCTTCTCGAAGGCTTGGCTTTAAACTTTTCATAGAGCTACAATAGGTGCACCAAGTTATAGGGTTTATAAATGTCACAGCTTATAAATGTGATGTCACATGTCACAGCGATGAGAAAAGTGAAAAAGTATTGTGTATGGGTTACAAAAATGTATGCAAGTAGGTATTCACAGTCATGTCTCGGAACTCTAAAGCCGGGATCAACTCTA

Coding sequence (CDS)

ATGGACTCCCAAATCGCCCCTCAGCAACAACATCACCAAGGCGTGGAAGGGGAAGAAGATGGGCAGCATCATGAGAAGCAGTCAGTGTTGAAGAAAGTGAAGGCTAAGGCTAAGAAGATTAAGGACAATATTACAAAGCATGGCGGTCATGACCATCCTCATGACTACGACGATGATGAAGAAGAAGATGAGCATGAAGGCGTCGGAATTGGAATGCCTCCTCCAGGTCCAAAAGAAACGACAAGTCGCCCTGCTGCAGTTACCACACTCTTTACTTCCGTCGATAACTCTGCTGATACCTCAAACACGACCATGCCTCTGTCTCCAAGTAAGTTGGAGGAGGATCCTCACGCGCCTAAGGACAAAACCCACCTTCACCCTCGTAATTCCGAGGTCAAAGTTCACGATCCCGCAAGCACAGGGAGCGAAGAAGCAGGGGAATCGCAGATTTTGGGTTCATTTGCAAAAATGAAAGTAAACGACGAACAGAATCAAAGCAGAGATCAGGTCAGTTACGCTCAGAAGATCTCAGCTGTGGGTTCAGCCGTTAGTGGAAAAGCAGTGGCAGCGAAGGATTTTGTGGCATCGAAGATAGCTTTAACAGTGACAGAGAAGCTGAAGCCAGGGGAGGAGGACAGAGCCCTGTCGGAAGTGATTTCGGAAGCTTTCAATAGAAGGAAGCAGGAGGTGGTGAAAGTTGGAGAAAGTGCATTTAGGGAGCCGACGAAAGGGAGTGTAACGGAGTCGGGGAGGAGTGTGGTGGGTATGGTGAAAGACACGGTGGGGTCGTGGCTGGGGAAAGCGGGAGACCAATCGGCGGGGCAAGGGAGGCCGGGGAAGGACCACGGTGGGACGGAGGCGGAGGTGCGGATACCGCAGGAATCGGCAAATTGA

Protein sequence

MDSQIAPQQQHHQGVEGEEDGQHHEKQSVLKKVKAKAKKIKDNITKHGGHDHPHDYDDDEEEDEHEGVGIGMPPPGPKETTSRPAAVTTLFTSVDNSADTSNTTMPLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVNDEQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASKIALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVGESAFREPTKGSVTESGRSVVGMVKDTVGSWLGKAGDQSAGQGRPGKDHGGTEAEVRIPQESAN

Homology

[Close]

BLAST of CmaCh19G004090 vs. TrEMBL
Match: A0A0A0LIE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914030 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.8e-52
Identity = 167/339 (49.26%), Postives = 186/339 (54.87%), Query Frame = 1


Query: 64  EHEGVGIGM---------PPPGPKETTSRPAAVTTLFTS---------VDNSADTSNTTM 123
           +H+ VGIG          PPP  +E TSRP+AV T FTS         VD+S    NTTM
Sbjct: 10  QHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDDSNVAPNTTM 69

Query: 124 PLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEA-GESQILGSFAKMKVND--- 183
            LSP KLE+DPHAPKD     P  SEVKVHDP++ GSEEA G SQ+  SFA+MKV+D   
Sbjct: 70  SLSPWKLEDDPHAPKDPHA--PHISEVKVHDPSNRGSEEAAGRSQVFDSFARMKVDDKEP 129

Query: 184 ----------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASK-------------- 243
                     ++    DQ +YAQKISAVGSAVSGKAVAAKDFVASK              
Sbjct: 130 NRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNK 189

Query: 244 ------------IALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVGES--AFREPTK 298
                       IALTVTEKLKPGEEDRALSEVISEA+ RRK EVVKVGES      P+K
Sbjct: 190 SSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESAFGRP-PSK 249

[Close]

BLAST of CmaCh19G004090 vs. TrEMBL
Match: W9S4V8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015784 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 74/181 (40.88%), Postives = 93/181 (51.38%), Query Frame = 1


Query: 11  HHQGVEGEEDGQHHEKQSVLKKVKAKAKKIKDNITKHG-GHDHPHDY---------DDDE 70
           H Q VEGE++  HHEK+SVL  VKAKA+KIKD +TKHG GHDH HD+         +DD 
Sbjct: 13  HDQAVEGEDE-HHHEKKSVLNMVKAKARKIKDTMTKHGHGHDHDHDHIPDDHDLDEEDDG 72

Query: 71  EEDEHEGVGIGMPPP---------GPKETTSRPAAVTTLF-TSVDNSADTSNTTMPLSPS 130
           +++  EG  +   P          GP    S P   +     S     D S T +P + S
Sbjct: 73  DDETVEGQKVHGAPTLYESTAVISGPATPVSTPPVPSFSHGISETKETDPSKTFVPGTES 132

Query: 131 K---------LEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVND 163
           K         L EDPHA KD     P N + KV DP   G+EE G + IL SF KM ++D
Sbjct: 133 KVNLERPKGGLVEDPHAAKDTPSYTPPNYQTKVTDPTGAGNEEIGVTPILSSFDKMNIHD 192

[Close]

BLAST of CmaCh19G004090 vs. TrEMBL
Match: K7MID0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.8e-09
Identity = 68/211 (32.23%), Postives = 88/211 (41.71%), Query Frame = 1


Query: 12  HQGVEGEEDGQH-HEKQSVLKKVKAKAKKIKDNITKHGGHDHPHDY-------------- 71
           H    GEE   H HEK+SVLKKVK KAKKIKD ITKHG HDH H++              
Sbjct: 23  HAVAHGEEQHHHDHEKKSVLKKVKQKAKKIKDTITKHGHHDHEHEHGHEYHLDDQHIPDD 82

Query: 72  DDDEEEDE------------HEGVGIGMPPPGPKETTSRPAA---------------VTT 131
            D EEEDE            ++   +    PG   T  RP                 +  
Sbjct: 83  HDLEEEDEMDEYPEVHGAPIYDSAAVRGAAPGHANTLGRPGVNFGGTTVMGVEPLHELRV 142

Query: 132 LFTSVDNSADTSNTTMPLS-----------------PSKLEEDPHAPKDKTHLH-PRNSE 163
           +  S     + + TT P                   P  LEEDPHAP+  +  + P N +
Sbjct: 143 VVVSPTTEINQNRTTDPTRTFVEGEKAVHRKVNLERPMYLEEDPHAPRSTSQAYAPANYQ 202

[Close]

BLAST of CmaCh19G004090 vs. TrEMBL
Match: A0A0R0FZI9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.8e-09
Identity = 68/211 (32.23%), Postives = 88/211 (41.71%), Query Frame = 1


Query: 12  HQGVEGEEDGQH-HEKQSVLKKVKAKAKKIKDNITKHGGHDHPHDY-------------- 71
           H    GEE   H HEK+SVLKKVK KAKKIKD ITKHG HDH H++              
Sbjct: 23  HAVAHGEEQHHHDHEKKSVLKKVKQKAKKIKDTITKHGHHDHEHEHGHEYHLDDQHIPDD 82

Query: 72  DDDEEEDE------------HEGVGIGMPPPGPKETTSRPAA---------------VTT 131
            D EEEDE            ++   +    PG   T  RP                 +  
Sbjct: 83  HDLEEEDEMDEYPEVHGAPIYDSAAVRGAAPGHANTLGRPGVNFGGTTVMGVEPLHELRV 142

Query: 132 LFTSVDNSADTSNTTMPLS-----------------PSKLEEDPHAPKDKTHLH-PRNSE 163
           +  S     + + TT P                   P  LEEDPHAP+  +  + P N +
Sbjct: 143 VVVSPTTEINQNRTTDPTRTFVEGEKAVHRKVNLERPMYLEEDPHAPRSTSQAYAPANYQ 202

[Close]

BLAST of CmaCh19G004090 vs. TrEMBL
Match: A0A0B2SE14_GLYSO (Low-temperature-induced 65 kDa protein OS=Glycine soja GN=glysoja_046475 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.8e-09
Identity = 68/211 (32.23%), Postives = 88/211 (41.71%), Query Frame = 1


Query: 12  HQGVEGEEDGQH-HEKQSVLKKVKAKAKKIKDNITKHGGHDHPHDY-------------- 71
           H    GEE   H HEK+SVLKKVK KAKKIKD ITKHG HDH H++              
Sbjct: 23  HAVAHGEEQHHHDHEKKSVLKKVKQKAKKIKDTITKHGHHDHEHEHGHEYHLDDQHIPDD 82

Query: 72  DDDEEEDE------------HEGVGIGMPPPGPKETTSRPAA---------------VTT 131
            D EEEDE            ++   +    PG   T  RP                 +  
Sbjct: 83  HDLEEEDEMDEYPEVHGAPIYDSAAVRGAAPGHANTLGRPGVNFGGTTVMGVEPLHELRV 142

Query: 132 LFTSVDNSADTSNTTMPLS-----------------PSKLEEDPHAPKDKTHLH-PRNSE 163
           +  S     + + TT P                   P  LEEDPHAP+  +  + P N +
Sbjct: 143 VVVSPTTEINQNRTTDPTRTFVEGEKAVHRKVNLERPMYLEEDPHAPRSTSQAYAPANYQ 202

[Close]

BLAST of CmaCh19G004090 vs. NCBI nr
Match: gi|778689071|ref|XP_011652891.1| (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 216/446 (48.43%), Postives = 239/446 (53.59%), Query Frame = 1


Query: 1   MDSQIAPQQQHHQG---------VEGEE-----DGQHHEKQSVLKKVKAKAKKIKDNITK 60
           MDSQI P   HH           VEG+E     D +HHEK+SVLKKVKAKAKKIKD ITK
Sbjct: 1   MDSQIPPHHHHHHHHPLGLHQSHVEGKEELQEGDQEHHEKKSVLKKVKAKAKKIKDTITK 60

Query: 61  HG-GHDHPHDYDD--DEEEDE---------------------------HEGVGIGM---- 120
           HG GHDH HD +D  D+EEDE                           H+ VGIG     
Sbjct: 61  HGHGHDH-HDEEDVSDDEEDEVVEDPEIQGAPLYEGAAMRSAVAGKGQHQDVGIGTGTTR 120

Query: 121 -----PPPGPKETTSRPAAVTTLFTS---------VDNSADTSNTTMPLSPSKLEEDPHA 180
                PPP  +E TSRP+AV T FTS         VD+S    NTTM LSP KLE+DPHA
Sbjct: 121 MMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDDSNVAPNTTMSLSPWKLEDDPHA 180

Query: 181 PKDKTHLHPRNSEVKVHDPASTGSEEA-GESQILGSFAKMKVND-------------EQN 240
           PKD     P  SEVKVHDP++ GSEEA G SQ+  SFA+MKV+D             ++ 
Sbjct: 181 PKDPHA--PHISEVKVHDPSNRGSEEAAGRSQVFDSFARMKVDDKEPNRTGSPRGLVQEQ 240

Query: 241 QSRDQVSYAQKISAVGSAVSGKAVAAKDFVASK--------------------------I 298
              DQ +YAQKISAVGSAVSGKAVAAKDFVASK                          I
Sbjct: 241 GGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNKSSSSSPLEYGKKI 300

[Close]

BLAST of CmaCh19G004090 vs. NCBI nr
Match: gi|659131819|ref|XP_008465872.1| (PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55
Identity = 173/339 (51.03%), Postives = 193/339 (56.93%), Query Frame = 1


Query: 64  EHEGVGIGM----------PPPGPKETTSRPAAVTTLFTSVDN-----SADTSN----TT 123
           +H+ VGIG+          PPP  +E  SRP+AV T FTSV+N       D SN    TT
Sbjct: 10  QHQDVGIGIGTTTMMHNYAPPPARREIRSRPSAVDTGFTSVENPTANHKVDDSNVAPNTT 69

Query: 124 MPLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEA-GESQILGSFAKMKVND-- 183
           M LSP KLEEDPH PKD     P  SEVKVHDP++ GSEEA G+SQ+  SFAKMKV+D  
Sbjct: 70  MSLSPWKLEEDPHGPKDPRA--PHISEVKVHDPSNRGSEEAAGKSQVFDSFAKMKVDDKK 129

Query: 184 -----------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASK------------- 243
                      +++   D ++YAQKISAVGSAVSGKAVAAKDFVASK             
Sbjct: 130 PNRTGSPHGLDQEHGGEDHINYAQKISAVGSAVSGKAVAAKDFVASKLGYGETKEGTTAD 189

Query: 244 -------------IALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVGESAF-REPTK 298
                        IALTVTEKLKPGEEDRALSEVISEA NRRK EVVKVGESAF R P+K
Sbjct: 190 KSSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEALNRRKDEVVKVGESAFGRPPSK 249

[Close]

BLAST of CmaCh19G004090 vs. NCBI nr
Match: gi|700205339|gb|KGN60472.1| (hypothetical protein Csa_3G914030 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 5.4e-52
Identity = 167/339 (49.26%), Postives = 186/339 (54.87%), Query Frame = 1


Query: 64  EHEGVGIGM---------PPPGPKETTSRPAAVTTLFTS---------VDNSADTSNTTM 123
           +H+ VGIG          PPP  +E TSRP+AV T FTS         VD+S    NTTM
Sbjct: 10  QHQDVGIGTGTTRMMHNEPPPARREITSRPSAVDTGFTSIHNTTANYKVDDSNVAPNTTM 69

Query: 124 PLSPSKLEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEA-GESQILGSFAKMKVND--- 183
            LSP KLE+DPHAPKD     P  SEVKVHDP++ GSEEA G SQ+  SFA+MKV+D   
Sbjct: 70  SLSPWKLEDDPHAPKDPHA--PHISEVKVHDPSNRGSEEAAGRSQVFDSFARMKVDDKEP 129

Query: 184 ----------EQNQSRDQVSYAQKISAVGSAVSGKAVAAKDFVASK-------------- 243
                     ++    DQ +YAQKISAVGSAVSGKAVAAKDFVASK              
Sbjct: 130 NRTGSPRGLVQEQGGEDQTNYAQKISAVGSAVSGKAVAAKDFVASKLGYGETTEETTTNK 189

Query: 244 ------------IALTVTEKLKPGEEDRALSEVISEAFNRRKQEVVKVGES--AFREPTK 298
                       IALTVTEKLKPGEEDRALSEVISEA+ RRK EVVKVGES      P+K
Sbjct: 190 SSSSSPLEYGKKIALTVTEKLKPGEEDRALSEVISEAWTRRKDEVVKVGESAFGRP-PSK 249

[Close]

BLAST of CmaCh19G004090 vs. NCBI nr
Match: gi|703141199|ref|XP_010107443.1| (hypothetical protein L484_015784 [Morus notabilis])

HSP 1 Score: 90.9 bits (224), Expect = 4.1e-15
Identity = 74/181 (40.88%), Postives = 93/181 (51.38%), Query Frame = 1


Query: 11  HHQGVEGEEDGQHHEKQSVLKKVKAKAKKIKDNITKHG-GHDHPHDY---------DDDE 70
           H Q VEGE++  HHEK+SVL  VKAKA+KIKD +TKHG GHDH HD+         +DD 
Sbjct: 13  HDQAVEGEDE-HHHEKKSVLNMVKAKARKIKDTMTKHGHGHDHDHDHIPDDHDLDEEDDG 72

Query: 71  EEDEHEGVGIGMPPP---------GPKETTSRPAAVTTLF-TSVDNSADTSNTTMPLSPS 130
           +++  EG  +   P          GP    S P   +     S     D S T +P + S
Sbjct: 73  DDETVEGQKVHGAPTLYESTAVISGPATPVSTPPVPSFSHGISETKETDPSKTFVPGTES 132

Query: 131 K---------LEEDPHAPKDKTHLHPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVND 163
           K         L EDPHA KD     P N + KV DP   G+EE G + IL SF KM ++D
Sbjct: 133 KVNLERPKGGLVEDPHAAKDTPSYTPPNYQTKVTDPTGAGNEEIGVTPILSSFDKMNIHD 192

[Close]

BLAST of CmaCh19G004090 vs. NCBI nr
Match: gi|720054545|ref|XP_010273089.1| (PREDICTED: low-temperature-induced 65 kDa protein-like [Nelumbo nucifera])

HSP 1 Score: 72.8 bits (177), Expect = 1.1e-09
Identity = 66/173 (38.15%), Postives = 88/173 (50.87%), Query Frame = 1


Query: 7   PQQQHHQG----VEGEEDGQHHEKQSVLKKVKAKAKKIKD--NITKHG-GHDHPHDYDDD 66
           P   H  G    +EGE++  HHEK+SVLKKVKAKAKKIKD   I KHG GHD+ HD+DDD
Sbjct: 18  PHDPHTAGLRSVIEGEDE--HHEKKSVLKKVKAKAKKIKDTLGIKKHGNGHDYDHDHDDD 77

Query: 67  EEED-----EHEGVGIGMPPPGPKETTSRPAAVTTLFTSVDNSADTSNTTMPLSP----S 126
           +++D     + +   +   PP  +    R           +  A   +  + L P     
Sbjct: 78  DDDDDEVEEDEQDTEVHKEPPIYESIADR---------IEEEDASGQSIRVNLGPIGRLP 137

Query: 127 KLEEDPHAPKDKTHL-HPRNSEVKVHDPASTGSEEAGESQILGSFAKMKVNDE 163
            L +DP APK +     P N + K  DP   G EE     IL SF KMKV+++
Sbjct: 138 PLLKDPDAPKGRGDTSDPANYQTKATDPTGAGGEEVRVEPILESFGKMKVSEQ 179

The following BLAST results are available for this feature:

BLAST of CmaCh19G004090 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh19G004090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIE7_CUCSA	3.8e-52	49.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G914030 PE=4 SV=1	[more]
W9S4V8_9ROSA	2.8e-15	40.88	Uncharacterized protein OS=Morus notabilis GN=L484_015784 PE=4 SV=1	[more]
K7MID0_SOYBN	6.8e-09	32.23	Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1	[more]
A0A0R0FZI9_SOYBN	6.8e-09	32.23	Uncharacterized protein OS=Glycine max GN=GLYMA_16G189900 PE=4 SV=1	[more]
A0A0B2SE14_GLYSO	6.8e-09	32.23	Low-temperature-induced 65 kDa protein OS=Glycine soja GN=glysoja_046475 PE=4 SV...	[more]

BLAST of CmaCh19G004090 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh19G004090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778689071\|ref\|XP_011652891.1\|	1.3e-66	48.43	PREDICTED: low-temperature-induced 65 kDa protein [Cucumis sativus]	[more]
gi\|659131819\|ref\|XP_008465872.1\|	5.3e-55	51.03	PREDICTED: low-temperature-induced 65 kDa protein [Cucumis melo]	[more]
gi\|700205339\|gb\|KGN60472.1\|	5.4e-52	49.26	hypothetical protein Csa_3G914030 [Cucumis sativus]	[more]
gi\|703141199\|ref\|XP_010107443.1\|	4.1e-15	40.88	hypothetical protein L484_015784 [Morus notabilis]	[more]
gi\|720054545\|ref\|XP_010273089.1\|	1.1e-09	38.15	PREDICTED: low-temperature-induced 65 kDa protein-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0006950	response to stress
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G004090.1	CmaCh19G004090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33836	FAMILY NOT NAMED	coord: 1..177 score: 1.6
None	No IPR available	PANTHER	PTHR33836:SF1	ARM REPEAT SUPERFAMILY PROTEIN-RELATED	coord: 1..177 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh19G004090	Cucsa.313890	Cucumber (Gy14) v1	cgycmaB0869
CmaCh19G004090	Cla002832	Watermelon (97103) v1	cmawmB472
CmaCh19G004090	Csa3G914030	Cucumber (Chinese Long) v2	cmacuB511
CmaCh19G004090	MELO3C003321	Melon (DHL92) v3.5.1	cmameB469
CmaCh19G004090	ClCG09G012920	Watermelon (Charleston Gray)	cmawcgB440
CmaCh19G004090	CmoCh02G010830	Cucurbita moschata (Rifu)	cmacmoB527
CmaCh19G004090	CmoCh19G004180	Cucurbita moschata (Rifu)	cmacmoB508
CmaCh19G004090	Lsi05G000090	Bottle gourd (USVL1VR-Ls)	cmalsiB490
CmaCh19G004090	Cp4.1LG15g03160	Cucurbita pepo (Zucchini)	cmacpeB522
CmaCh19G004090	Cp4.1LG05g06600	Cucurbita pepo (Zucchini)	cmacpeB548
CmaCh19G004090	MELO3C003321.2	Melon (DHL92) v3.6.1	cmamedB544
CmaCh19G004090	CsaV3_3G049950	Cucumber (Chinese Long) v3	cmacucB0616
CmaCh19G004090	Cla97C09G175640	Watermelon (97103) v2	cmawmbB549
CmaCh19G004090	Bhi05G000440	Wax gourd	cmawgoB0646
CmaCh19G004090	CsGy3G044900	Cucumber (Gy14) v2	cgybcmaB377
CmaCh19G004090	Carg08412	Silver-seed gourd	carcmaB0997
CmaCh19G004090	Carg25091	Silver-seed gourd	carcmaB0294

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh19G004090	CmaCh02G010650	Cucurbita maxima (Rimu)	cmacmaB455

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh19G004090	Cucumber (Chinese Long) v3	cmacucB0625
CmaCh19G004090	Cucumber (Gy14) v1	cgycmaB0868
CmaCh19G004090	Wild cucumber (PI 183967)	cmacpiB518
CmaCh19G004090	Cucumber (Chinese Long) v2	cmacuB517
CmaCh19G004090	Melon (DHL92) v3.5.1	cmameB473
CmaCh19G004090	Cucumber (Gy14) v2	cgybcmaB385
CmaCh19G004090	Melon (DHL92) v3.6.1	cmamedB547